Multiple sequence alignment - TraesCS7D01G549900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G549900 | chr7D | 100.000 | 2459 | 0 | 0 | 1 | 2459 | 634441272 | 634438814 | 0.000000e+00 | 4542.0 |
1 | TraesCS7D01G549900 | chr7D | 92.857 | 56 | 4 | 0 | 1127 | 1182 | 634440050 | 634439995 | 5.640000e-12 | 82.4 |
2 | TraesCS7D01G549900 | chr7D | 92.857 | 56 | 4 | 0 | 1223 | 1278 | 634440146 | 634440091 | 5.640000e-12 | 82.4 |
3 | TraesCS7D01G549900 | chr7A | 93.843 | 877 | 48 | 4 | 347 | 1222 | 731881778 | 731882649 | 0.000000e+00 | 1315.0 |
4 | TraesCS7D01G549900 | chr7A | 94.069 | 725 | 23 | 7 | 1748 | 2454 | 731883129 | 731883851 | 0.000000e+00 | 1083.0 |
5 | TraesCS7D01G549900 | chr7A | 88.017 | 459 | 28 | 12 | 1219 | 1657 | 731882682 | 731883133 | 3.620000e-143 | 518.0 |
6 | TraesCS7D01G549900 | chr7B | 93.220 | 413 | 15 | 4 | 814 | 1222 | 741668250 | 741668653 | 1.630000e-166 | 595.0 |
7 | TraesCS7D01G549900 | chr7B | 88.610 | 439 | 34 | 11 | 1222 | 1656 | 741668689 | 741669115 | 1.010000e-143 | 520.0 |
8 | TraesCS7D01G549900 | chr7B | 87.146 | 459 | 46 | 10 | 1749 | 2200 | 741682578 | 741683030 | 2.180000e-140 | 508.0 |
9 | TraesCS7D01G549900 | chr7B | 93.204 | 103 | 7 | 0 | 2257 | 2359 | 741683032 | 741683134 | 4.240000e-33 | 152.0 |
10 | TraesCS7D01G549900 | chr7B | 96.226 | 53 | 2 | 0 | 1223 | 1275 | 741668555 | 741668607 | 1.210000e-13 | 87.9 |
11 | TraesCS7D01G549900 | chr2D | 92.642 | 299 | 18 | 3 | 1 | 296 | 260370396 | 260370099 | 6.280000e-116 | 427.0 |
12 | TraesCS7D01G549900 | chr2D | 87.097 | 124 | 13 | 3 | 1631 | 1753 | 267347270 | 267347149 | 1.190000e-28 | 137.0 |
13 | TraesCS7D01G549900 | chrUn | 91.639 | 299 | 21 | 3 | 1 | 296 | 287139146 | 287138849 | 6.330000e-111 | 411.0 |
14 | TraesCS7D01G549900 | chrUn | 91.639 | 299 | 21 | 3 | 1 | 296 | 287145315 | 287145018 | 6.330000e-111 | 411.0 |
15 | TraesCS7D01G549900 | chrUn | 91.892 | 296 | 20 | 3 | 1 | 293 | 466024182 | 466024476 | 6.330000e-111 | 411.0 |
16 | TraesCS7D01G549900 | chrUn | 87.417 | 302 | 29 | 6 | 1 | 296 | 243699005 | 243698707 | 3.030000e-89 | 339.0 |
17 | TraesCS7D01G549900 | chr1A | 89.967 | 299 | 26 | 3 | 1 | 296 | 473153371 | 473153074 | 1.380000e-102 | 383.0 |
18 | TraesCS7D01G549900 | chr1A | 89.655 | 116 | 10 | 2 | 1656 | 1771 | 58289720 | 58289833 | 1.970000e-31 | 147.0 |
19 | TraesCS7D01G549900 | chr5B | 89.597 | 298 | 23 | 6 | 1 | 293 | 149326890 | 149327184 | 2.990000e-99 | 372.0 |
20 | TraesCS7D01G549900 | chr5B | 90.741 | 108 | 8 | 2 | 1647 | 1754 | 425880113 | 425880218 | 2.550000e-30 | 143.0 |
21 | TraesCS7D01G549900 | chr4B | 89.073 | 302 | 24 | 8 | 1 | 296 | 62047359 | 62047657 | 1.390000e-97 | 366.0 |
22 | TraesCS7D01G549900 | chr5D | 88.889 | 297 | 27 | 5 | 1 | 293 | 509445559 | 509445853 | 6.460000e-96 | 361.0 |
23 | TraesCS7D01G549900 | chr5D | 93.939 | 99 | 6 | 0 | 1655 | 1753 | 558970434 | 558970532 | 1.520000e-32 | 150.0 |
24 | TraesCS7D01G549900 | chr5D | 90.179 | 112 | 10 | 1 | 1642 | 1753 | 65990478 | 65990588 | 7.090000e-31 | 145.0 |
25 | TraesCS7D01G549900 | chr3D | 89.831 | 118 | 9 | 3 | 1655 | 1770 | 138076337 | 138076221 | 5.480000e-32 | 148.0 |
26 | TraesCS7D01G549900 | chr6B | 93.000 | 100 | 7 | 0 | 1653 | 1752 | 309754922 | 309755021 | 1.970000e-31 | 147.0 |
27 | TraesCS7D01G549900 | chr6A | 76.522 | 345 | 35 | 26 | 1109 | 1424 | 581983257 | 581983584 | 1.970000e-31 | 147.0 |
28 | TraesCS7D01G549900 | chr6A | 94.643 | 56 | 3 | 0 | 1223 | 1278 | 581982971 | 581983026 | 1.210000e-13 | 87.9 |
29 | TraesCS7D01G549900 | chr6A | 94.643 | 56 | 3 | 0 | 1223 | 1278 | 582086561 | 582086616 | 1.210000e-13 | 87.9 |
30 | TraesCS7D01G549900 | chr6A | 96.078 | 51 | 2 | 0 | 1223 | 1273 | 581983275 | 581983325 | 1.570000e-12 | 84.2 |
31 | TraesCS7D01G549900 | chr6A | 92.857 | 56 | 4 | 0 | 1223 | 1278 | 582095899 | 582095954 | 5.640000e-12 | 82.4 |
32 | TraesCS7D01G549900 | chr6A | 90.909 | 55 | 5 | 0 | 1223 | 1277 | 582630999 | 582630945 | 9.430000e-10 | 75.0 |
33 | TraesCS7D01G549900 | chr4A | 90.566 | 106 | 10 | 0 | 1649 | 1754 | 724808120 | 724808225 | 9.170000e-30 | 141.0 |
34 | TraesCS7D01G549900 | chr1D | 88.793 | 116 | 11 | 2 | 1656 | 1771 | 59879222 | 59879335 | 9.170000e-30 | 141.0 |
35 | TraesCS7D01G549900 | chr6D | 81.373 | 102 | 14 | 4 | 1356 | 1457 | 435831772 | 435831676 | 7.290000e-11 | 78.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G549900 | chr7D | 634438814 | 634441272 | 2458 | True | 1568.933333 | 4542 | 95.238000 | 1 | 2459 | 3 | chr7D.!!$R1 | 2458 |
1 | TraesCS7D01G549900 | chr7A | 731881778 | 731883851 | 2073 | False | 972.000000 | 1315 | 91.976333 | 347 | 2454 | 3 | chr7A.!!$F1 | 2107 |
2 | TraesCS7D01G549900 | chr7B | 741668250 | 741669115 | 865 | False | 400.966667 | 595 | 92.685333 | 814 | 1656 | 3 | chr7B.!!$F1 | 842 |
3 | TraesCS7D01G549900 | chr7B | 741682578 | 741683134 | 556 | False | 330.000000 | 508 | 90.175000 | 1749 | 2359 | 2 | chr7B.!!$F2 | 610 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
419 | 420 | 0.031449 | GAGTGGATCGAGTAGCCAGC | 59.969 | 60.0 | 0.0 | 0.0 | 46.65 | 4.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2366 | 2464 | 0.31812 | TCGTCGGGGACAAACTTACC | 59.682 | 55.0 | 0.0 | 0.0 | 32.09 | 2.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
19 | 20 | 4.655527 | CCCATTAGGCGCGTCTAG | 57.344 | 61.111 | 21.00 | 10.26 | 0.00 | 2.43 |
20 | 21 | 1.740285 | CCCATTAGGCGCGTCTAGT | 59.260 | 57.895 | 21.00 | 15.74 | 0.00 | 2.57 |
21 | 22 | 0.104304 | CCCATTAGGCGCGTCTAGTT | 59.896 | 55.000 | 21.00 | 9.91 | 0.00 | 2.24 |
22 | 23 | 1.338973 | CCCATTAGGCGCGTCTAGTTA | 59.661 | 52.381 | 21.00 | 6.82 | 0.00 | 2.24 |
23 | 24 | 2.607282 | CCCATTAGGCGCGTCTAGTTAG | 60.607 | 54.545 | 21.00 | 11.30 | 0.00 | 2.34 |
24 | 25 | 2.607282 | CCATTAGGCGCGTCTAGTTAGG | 60.607 | 54.545 | 21.00 | 16.26 | 0.00 | 2.69 |
25 | 26 | 1.027357 | TTAGGCGCGTCTAGTTAGGG | 58.973 | 55.000 | 21.00 | 0.00 | 0.00 | 3.53 |
26 | 27 | 0.820891 | TAGGCGCGTCTAGTTAGGGG | 60.821 | 60.000 | 18.03 | 0.00 | 0.00 | 4.79 |
27 | 28 | 2.279318 | GCGCGTCTAGTTAGGGGC | 60.279 | 66.667 | 8.43 | 0.00 | 36.31 | 5.80 |
28 | 29 | 2.783288 | GCGCGTCTAGTTAGGGGCT | 61.783 | 63.158 | 8.43 | 0.00 | 39.33 | 5.19 |
29 | 30 | 1.814527 | CGCGTCTAGTTAGGGGCTT | 59.185 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
30 | 31 | 1.027357 | CGCGTCTAGTTAGGGGCTTA | 58.973 | 55.000 | 0.00 | 0.00 | 0.00 | 3.09 |
31 | 32 | 1.001597 | CGCGTCTAGTTAGGGGCTTAG | 60.002 | 57.143 | 0.00 | 0.00 | 0.00 | 2.18 |
32 | 33 | 1.269673 | GCGTCTAGTTAGGGGCTTAGC | 60.270 | 57.143 | 0.00 | 0.00 | 0.00 | 3.09 |
48 | 49 | 6.901081 | GGCTTAGCCCAACTTATCATATTT | 57.099 | 37.500 | 13.12 | 0.00 | 44.06 | 1.40 |
49 | 50 | 7.290110 | GGCTTAGCCCAACTTATCATATTTT | 57.710 | 36.000 | 13.12 | 0.00 | 44.06 | 1.82 |
50 | 51 | 7.726216 | GGCTTAGCCCAACTTATCATATTTTT | 58.274 | 34.615 | 13.12 | 0.00 | 44.06 | 1.94 |
96 | 97 | 6.530019 | AACAGATATAAGGCAACCTTTTGG | 57.470 | 37.500 | 3.85 | 0.00 | 41.69 | 3.28 |
97 | 98 | 5.826643 | ACAGATATAAGGCAACCTTTTGGA | 58.173 | 37.500 | 3.85 | 0.00 | 41.69 | 3.53 |
98 | 99 | 6.252995 | ACAGATATAAGGCAACCTTTTGGAA | 58.747 | 36.000 | 3.85 | 0.00 | 41.69 | 3.53 |
99 | 100 | 6.897413 | ACAGATATAAGGCAACCTTTTGGAAT | 59.103 | 34.615 | 3.85 | 0.00 | 41.69 | 3.01 |
100 | 101 | 7.400052 | ACAGATATAAGGCAACCTTTTGGAATT | 59.600 | 33.333 | 3.85 | 0.00 | 41.69 | 2.17 |
101 | 102 | 8.912988 | CAGATATAAGGCAACCTTTTGGAATTA | 58.087 | 33.333 | 3.85 | 0.00 | 41.69 | 1.40 |
102 | 103 | 9.487442 | AGATATAAGGCAACCTTTTGGAATTAA | 57.513 | 29.630 | 3.85 | 0.00 | 41.69 | 1.40 |
103 | 104 | 9.750125 | GATATAAGGCAACCTTTTGGAATTAAG | 57.250 | 33.333 | 3.85 | 0.00 | 41.69 | 1.85 |
104 | 105 | 4.271696 | AGGCAACCTTTTGGAATTAAGC | 57.728 | 40.909 | 0.00 | 0.00 | 44.07 | 3.09 |
105 | 106 | 3.645687 | AGGCAACCTTTTGGAATTAAGCA | 59.354 | 39.130 | 0.00 | 0.00 | 44.07 | 3.91 |
106 | 107 | 4.102367 | AGGCAACCTTTTGGAATTAAGCAA | 59.898 | 37.500 | 0.00 | 0.00 | 44.07 | 3.91 |
107 | 108 | 5.003160 | GGCAACCTTTTGGAATTAAGCAAT | 58.997 | 37.500 | 0.00 | 0.00 | 44.07 | 3.56 |
108 | 109 | 6.013812 | AGGCAACCTTTTGGAATTAAGCAATA | 60.014 | 34.615 | 0.00 | 0.00 | 44.07 | 1.90 |
109 | 110 | 6.652900 | GGCAACCTTTTGGAATTAAGCAATAA | 59.347 | 34.615 | 0.00 | 0.00 | 44.07 | 1.40 |
110 | 111 | 7.148423 | GGCAACCTTTTGGAATTAAGCAATAAG | 60.148 | 37.037 | 0.00 | 0.00 | 44.07 | 1.73 |
111 | 112 | 7.387673 | GCAACCTTTTGGAATTAAGCAATAAGT | 59.612 | 33.333 | 0.00 | 0.00 | 44.07 | 2.24 |
112 | 113 | 8.925700 | CAACCTTTTGGAATTAAGCAATAAGTC | 58.074 | 33.333 | 2.28 | 2.28 | 44.07 | 3.01 |
113 | 114 | 8.189119 | ACCTTTTGGAATTAAGCAATAAGTCA | 57.811 | 30.769 | 10.53 | 0.00 | 39.71 | 3.41 |
114 | 115 | 8.815912 | ACCTTTTGGAATTAAGCAATAAGTCAT | 58.184 | 29.630 | 10.53 | 0.00 | 39.71 | 3.06 |
125 | 126 | 6.884280 | AGCAATAAGTCATAACTATTGCCC | 57.116 | 37.500 | 17.82 | 0.00 | 43.83 | 5.36 |
126 | 127 | 5.470098 | AGCAATAAGTCATAACTATTGCCCG | 59.530 | 40.000 | 17.82 | 0.00 | 43.83 | 6.13 |
127 | 128 | 5.468746 | GCAATAAGTCATAACTATTGCCCGA | 59.531 | 40.000 | 12.76 | 0.00 | 41.07 | 5.14 |
128 | 129 | 6.565999 | GCAATAAGTCATAACTATTGCCCGAC | 60.566 | 42.308 | 12.76 | 0.00 | 41.07 | 4.79 |
129 | 130 | 4.755266 | AAGTCATAACTATTGCCCGACT | 57.245 | 40.909 | 0.00 | 0.00 | 33.48 | 4.18 |
130 | 131 | 4.323553 | AGTCATAACTATTGCCCGACTC | 57.676 | 45.455 | 0.00 | 0.00 | 32.59 | 3.36 |
131 | 132 | 3.069729 | AGTCATAACTATTGCCCGACTCC | 59.930 | 47.826 | 0.00 | 0.00 | 32.59 | 3.85 |
132 | 133 | 2.367567 | TCATAACTATTGCCCGACTCCC | 59.632 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
133 | 134 | 1.125633 | TAACTATTGCCCGACTCCCC | 58.874 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
134 | 135 | 0.620700 | AACTATTGCCCGACTCCCCT | 60.621 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
135 | 136 | 0.620700 | ACTATTGCCCGACTCCCCTT | 60.621 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
136 | 137 | 1.343681 | ACTATTGCCCGACTCCCCTTA | 60.344 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
137 | 138 | 1.344763 | CTATTGCCCGACTCCCCTTAG | 59.655 | 57.143 | 0.00 | 0.00 | 0.00 | 2.18 |
138 | 139 | 1.345715 | ATTGCCCGACTCCCCTTAGG | 61.346 | 60.000 | 0.00 | 0.00 | 0.00 | 2.69 |
139 | 140 | 2.042230 | GCCCGACTCCCCTTAGGA | 60.042 | 66.667 | 0.00 | 0.00 | 44.91 | 2.94 |
147 | 148 | 3.007581 | TCCCCTTAGGAGCCAGAAC | 57.992 | 57.895 | 0.00 | 0.00 | 40.93 | 3.01 |
148 | 149 | 0.620700 | TCCCCTTAGGAGCCAGAACC | 60.621 | 60.000 | 0.00 | 0.00 | 40.93 | 3.62 |
149 | 150 | 1.636769 | CCCCTTAGGAGCCAGAACCC | 61.637 | 65.000 | 0.00 | 0.00 | 38.24 | 4.11 |
150 | 151 | 0.621862 | CCCTTAGGAGCCAGAACCCT | 60.622 | 60.000 | 0.00 | 0.00 | 33.47 | 4.34 |
151 | 152 | 1.344087 | CCCTTAGGAGCCAGAACCCTA | 60.344 | 57.143 | 0.00 | 0.00 | 33.47 | 3.53 |
152 | 153 | 2.478292 | CCTTAGGAGCCAGAACCCTAA | 58.522 | 52.381 | 0.00 | 0.00 | 39.47 | 2.69 |
153 | 154 | 2.844348 | CCTTAGGAGCCAGAACCCTAAA | 59.156 | 50.000 | 0.00 | 0.00 | 40.73 | 1.85 |
154 | 155 | 3.370633 | CCTTAGGAGCCAGAACCCTAAAC | 60.371 | 52.174 | 0.00 | 0.00 | 40.73 | 2.01 |
155 | 156 | 0.992695 | AGGAGCCAGAACCCTAAACC | 59.007 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
156 | 157 | 0.034380 | GGAGCCAGAACCCTAAACCC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.11 |
157 | 158 | 0.992695 | GAGCCAGAACCCTAAACCCT | 59.007 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
158 | 159 | 2.193993 | GAGCCAGAACCCTAAACCCTA | 58.806 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
159 | 160 | 2.170817 | GAGCCAGAACCCTAAACCCTAG | 59.829 | 54.545 | 0.00 | 0.00 | 0.00 | 3.02 |
160 | 161 | 1.408405 | GCCAGAACCCTAAACCCTAGC | 60.408 | 57.143 | 0.00 | 0.00 | 0.00 | 3.42 |
161 | 162 | 1.134491 | CCAGAACCCTAAACCCTAGCG | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 4.26 |
162 | 163 | 0.540454 | AGAACCCTAAACCCTAGCGC | 59.460 | 55.000 | 0.00 | 0.00 | 0.00 | 5.92 |
163 | 164 | 0.463295 | GAACCCTAAACCCTAGCGCC | 60.463 | 60.000 | 2.29 | 0.00 | 0.00 | 6.53 |
164 | 165 | 0.912968 | AACCCTAAACCCTAGCGCCT | 60.913 | 55.000 | 2.29 | 0.00 | 0.00 | 5.52 |
165 | 166 | 1.335882 | ACCCTAAACCCTAGCGCCTC | 61.336 | 60.000 | 2.29 | 0.00 | 0.00 | 4.70 |
166 | 167 | 1.049289 | CCCTAAACCCTAGCGCCTCT | 61.049 | 60.000 | 2.29 | 0.00 | 0.00 | 3.69 |
167 | 168 | 0.389757 | CCTAAACCCTAGCGCCTCTC | 59.610 | 60.000 | 2.29 | 0.00 | 0.00 | 3.20 |
168 | 169 | 1.112113 | CTAAACCCTAGCGCCTCTCA | 58.888 | 55.000 | 2.29 | 0.00 | 0.00 | 3.27 |
169 | 170 | 0.822164 | TAAACCCTAGCGCCTCTCAC | 59.178 | 55.000 | 2.29 | 0.00 | 0.00 | 3.51 |
170 | 171 | 1.900545 | AAACCCTAGCGCCTCTCACC | 61.901 | 60.000 | 2.29 | 0.00 | 0.00 | 4.02 |
171 | 172 | 2.759973 | CCCTAGCGCCTCTCACCA | 60.760 | 66.667 | 2.29 | 0.00 | 0.00 | 4.17 |
172 | 173 | 2.496817 | CCTAGCGCCTCTCACCAC | 59.503 | 66.667 | 2.29 | 0.00 | 0.00 | 4.16 |
173 | 174 | 2.496817 | CTAGCGCCTCTCACCACC | 59.503 | 66.667 | 2.29 | 0.00 | 0.00 | 4.61 |
174 | 175 | 3.417275 | CTAGCGCCTCTCACCACCG | 62.417 | 68.421 | 2.29 | 0.00 | 0.00 | 4.94 |
199 | 200 | 4.933064 | CTCCTCCCGCGCGATCAC | 62.933 | 72.222 | 34.63 | 0.00 | 0.00 | 3.06 |
233 | 234 | 4.749310 | CAGCCGCGCTCAACCTCT | 62.749 | 66.667 | 5.56 | 0.00 | 36.40 | 3.69 |
234 | 235 | 4.443266 | AGCCGCGCTCAACCTCTC | 62.443 | 66.667 | 5.56 | 0.00 | 30.62 | 3.20 |
235 | 236 | 4.742201 | GCCGCGCTCAACCTCTCA | 62.742 | 66.667 | 5.56 | 0.00 | 0.00 | 3.27 |
236 | 237 | 2.811317 | CCGCGCTCAACCTCTCAC | 60.811 | 66.667 | 5.56 | 0.00 | 0.00 | 3.51 |
237 | 238 | 2.811317 | CGCGCTCAACCTCTCACC | 60.811 | 66.667 | 5.56 | 0.00 | 0.00 | 4.02 |
238 | 239 | 2.343758 | GCGCTCAACCTCTCACCA | 59.656 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
239 | 240 | 1.301716 | GCGCTCAACCTCTCACCAA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
240 | 241 | 1.569479 | GCGCTCAACCTCTCACCAAC | 61.569 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
241 | 242 | 0.951040 | CGCTCAACCTCTCACCAACC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
242 | 243 | 0.606673 | GCTCAACCTCTCACCAACCC | 60.607 | 60.000 | 0.00 | 0.00 | 0.00 | 4.11 |
243 | 244 | 0.764890 | CTCAACCTCTCACCAACCCA | 59.235 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
244 | 245 | 0.472471 | TCAACCTCTCACCAACCCAC | 59.528 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
245 | 246 | 0.537371 | CAACCTCTCACCAACCCACC | 60.537 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
246 | 247 | 0.697854 | AACCTCTCACCAACCCACCT | 60.698 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
247 | 248 | 1.128188 | ACCTCTCACCAACCCACCTC | 61.128 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
248 | 249 | 0.838122 | CCTCTCACCAACCCACCTCT | 60.838 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
249 | 250 | 0.610687 | CTCTCACCAACCCACCTCTC | 59.389 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
250 | 251 | 0.105194 | TCTCACCAACCCACCTCTCA | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
251 | 252 | 0.987294 | CTCACCAACCCACCTCTCAT | 59.013 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
252 | 253 | 0.984230 | TCACCAACCCACCTCTCATC | 59.016 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
253 | 254 | 0.035056 | CACCAACCCACCTCTCATCC | 60.035 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
254 | 255 | 1.208165 | ACCAACCCACCTCTCATCCC | 61.208 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
255 | 256 | 0.916358 | CCAACCCACCTCTCATCCCT | 60.916 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
256 | 257 | 1.625228 | CCAACCCACCTCTCATCCCTA | 60.625 | 57.143 | 0.00 | 0.00 | 0.00 | 3.53 |
257 | 258 | 1.486726 | CAACCCACCTCTCATCCCTAC | 59.513 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
258 | 259 | 0.716591 | ACCCACCTCTCATCCCTACA | 59.283 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
259 | 260 | 1.080498 | ACCCACCTCTCATCCCTACAA | 59.920 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
260 | 261 | 1.486726 | CCCACCTCTCATCCCTACAAC | 59.513 | 57.143 | 0.00 | 0.00 | 0.00 | 3.32 |
261 | 262 | 1.486726 | CCACCTCTCATCCCTACAACC | 59.513 | 57.143 | 0.00 | 0.00 | 0.00 | 3.77 |
262 | 263 | 2.472029 | CACCTCTCATCCCTACAACCT | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.50 |
263 | 264 | 3.630054 | CCACCTCTCATCCCTACAACCTA | 60.630 | 52.174 | 0.00 | 0.00 | 0.00 | 3.08 |
264 | 265 | 3.385111 | CACCTCTCATCCCTACAACCTAC | 59.615 | 52.174 | 0.00 | 0.00 | 0.00 | 3.18 |
265 | 266 | 3.272551 | ACCTCTCATCCCTACAACCTACT | 59.727 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
266 | 267 | 3.639094 | CCTCTCATCCCTACAACCTACTG | 59.361 | 52.174 | 0.00 | 0.00 | 0.00 | 2.74 |
267 | 268 | 4.282496 | CTCTCATCCCTACAACCTACTGT | 58.718 | 47.826 | 0.00 | 0.00 | 0.00 | 3.55 |
268 | 269 | 4.684724 | TCTCATCCCTACAACCTACTGTT | 58.315 | 43.478 | 0.00 | 0.00 | 37.80 | 3.16 |
276 | 277 | 1.677552 | AACCTACTGTTGAGGCCCG | 59.322 | 57.895 | 0.00 | 0.00 | 37.63 | 6.13 |
277 | 278 | 1.838073 | AACCTACTGTTGAGGCCCGG | 61.838 | 60.000 | 0.00 | 0.00 | 37.63 | 5.73 |
278 | 279 | 2.291043 | CCTACTGTTGAGGCCCGGT | 61.291 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
279 | 280 | 1.079127 | CTACTGTTGAGGCCCGGTG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
280 | 281 | 1.534476 | TACTGTTGAGGCCCGGTGA | 60.534 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
281 | 282 | 1.823169 | TACTGTTGAGGCCCGGTGAC | 61.823 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
282 | 283 | 3.901797 | CTGTTGAGGCCCGGTGACC | 62.902 | 68.421 | 0.00 | 0.00 | 0.00 | 4.02 |
283 | 284 | 4.717313 | GTTGAGGCCCGGTGACCC | 62.717 | 72.222 | 0.00 | 0.00 | 0.00 | 4.46 |
284 | 285 | 4.974438 | TTGAGGCCCGGTGACCCT | 62.974 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
285 | 286 | 3.549433 | TTGAGGCCCGGTGACCCTA | 62.549 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
286 | 287 | 3.155167 | GAGGCCCGGTGACCCTAG | 61.155 | 72.222 | 0.00 | 0.00 | 0.00 | 3.02 |
289 | 290 | 3.851128 | GCCCGGTGACCCTAGCTC | 61.851 | 72.222 | 0.00 | 0.00 | 0.00 | 4.09 |
290 | 291 | 3.155167 | CCCGGTGACCCTAGCTCC | 61.155 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
291 | 292 | 2.042843 | CCGGTGACCCTAGCTCCT | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
292 | 293 | 1.229359 | CCGGTGACCCTAGCTCCTA | 59.771 | 63.158 | 0.00 | 0.00 | 0.00 | 2.94 |
293 | 294 | 1.108132 | CCGGTGACCCTAGCTCCTAC | 61.108 | 65.000 | 0.00 | 0.00 | 0.00 | 3.18 |
294 | 295 | 1.108132 | CGGTGACCCTAGCTCCTACC | 61.108 | 65.000 | 0.00 | 0.00 | 0.00 | 3.18 |
295 | 296 | 0.032416 | GGTGACCCTAGCTCCTACCA | 60.032 | 60.000 | 0.00 | 0.00 | 0.00 | 3.25 |
296 | 297 | 1.404843 | GTGACCCTAGCTCCTACCAG | 58.595 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
297 | 298 | 1.063867 | GTGACCCTAGCTCCTACCAGA | 60.064 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
298 | 299 | 1.644337 | TGACCCTAGCTCCTACCAGAA | 59.356 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
299 | 300 | 2.247635 | TGACCCTAGCTCCTACCAGAAT | 59.752 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
300 | 301 | 2.630580 | GACCCTAGCTCCTACCAGAATG | 59.369 | 54.545 | 0.00 | 0.00 | 0.00 | 2.67 |
315 | 316 | 4.510167 | CAGAATGGGACCAGGATTACTT | 57.490 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
316 | 317 | 5.630415 | CAGAATGGGACCAGGATTACTTA | 57.370 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
317 | 318 | 6.192970 | CAGAATGGGACCAGGATTACTTAT | 57.807 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
318 | 319 | 7.316393 | CAGAATGGGACCAGGATTACTTATA | 57.684 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
319 | 320 | 7.162082 | CAGAATGGGACCAGGATTACTTATAC | 58.838 | 42.308 | 0.00 | 0.00 | 0.00 | 1.47 |
320 | 321 | 7.016661 | CAGAATGGGACCAGGATTACTTATACT | 59.983 | 40.741 | 0.00 | 0.00 | 0.00 | 2.12 |
321 | 322 | 6.936968 | ATGGGACCAGGATTACTTATACTC | 57.063 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
322 | 323 | 5.784023 | TGGGACCAGGATTACTTATACTCA | 58.216 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
323 | 324 | 6.206787 | TGGGACCAGGATTACTTATACTCAA | 58.793 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
324 | 325 | 6.099269 | TGGGACCAGGATTACTTATACTCAAC | 59.901 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
325 | 326 | 6.214399 | GGACCAGGATTACTTATACTCAACG | 58.786 | 44.000 | 0.00 | 0.00 | 0.00 | 4.10 |
326 | 327 | 6.040166 | GGACCAGGATTACTTATACTCAACGA | 59.960 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
327 | 328 | 7.414222 | ACCAGGATTACTTATACTCAACGAA | 57.586 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
328 | 329 | 8.019656 | ACCAGGATTACTTATACTCAACGAAT | 57.980 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
329 | 330 | 8.142551 | ACCAGGATTACTTATACTCAACGAATC | 58.857 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
330 | 331 | 8.361139 | CCAGGATTACTTATACTCAACGAATCT | 58.639 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
331 | 332 | 9.186323 | CAGGATTACTTATACTCAACGAATCTG | 57.814 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
332 | 333 | 8.915036 | AGGATTACTTATACTCAACGAATCTGT | 58.085 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
333 | 334 | 8.969267 | GGATTACTTATACTCAACGAATCTGTG | 58.031 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
334 | 335 | 9.731819 | GATTACTTATACTCAACGAATCTGTGA | 57.268 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
336 | 337 | 7.813852 | ACTTATACTCAACGAATCTGTGAAC | 57.186 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
337 | 338 | 7.375834 | ACTTATACTCAACGAATCTGTGAACA | 58.624 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
338 | 339 | 8.035394 | ACTTATACTCAACGAATCTGTGAACAT | 58.965 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
339 | 340 | 9.516314 | CTTATACTCAACGAATCTGTGAACATA | 57.484 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
340 | 341 | 7.993821 | ATACTCAACGAATCTGTGAACATAG | 57.006 | 36.000 | 0.00 | 0.00 | 0.00 | 2.23 |
341 | 342 | 5.784177 | ACTCAACGAATCTGTGAACATAGT | 58.216 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
342 | 343 | 5.635280 | ACTCAACGAATCTGTGAACATAGTG | 59.365 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
343 | 344 | 4.388773 | TCAACGAATCTGTGAACATAGTGC | 59.611 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
344 | 345 | 4.193826 | ACGAATCTGTGAACATAGTGCT | 57.806 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
345 | 346 | 4.177026 | ACGAATCTGTGAACATAGTGCTC | 58.823 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
351 | 352 | 4.039124 | TCTGTGAACATAGTGCTCAACTGA | 59.961 | 41.667 | 0.00 | 0.00 | 40.26 | 3.41 |
365 | 366 | 4.787882 | GCTCAACTGAACTTGTCTTTGCTC | 60.788 | 45.833 | 0.00 | 0.00 | 0.00 | 4.26 |
366 | 367 | 3.627577 | TCAACTGAACTTGTCTTTGCTCC | 59.372 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
373 | 374 | 2.158871 | ACTTGTCTTTGCTCCGGTTACA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
374 | 375 | 2.163818 | TGTCTTTGCTCCGGTTACAG | 57.836 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
377 | 378 | 1.079503 | CTTTGCTCCGGTTACAGCTC | 58.920 | 55.000 | 13.44 | 0.00 | 36.53 | 4.09 |
382 | 383 | 2.202756 | CCGGTTACAGCTCTCGGC | 60.203 | 66.667 | 0.00 | 0.00 | 42.19 | 5.54 |
419 | 420 | 0.031449 | GAGTGGATCGAGTAGCCAGC | 59.969 | 60.000 | 0.00 | 0.00 | 46.65 | 4.85 |
425 | 426 | 2.164624 | GGATCGAGTAGCCAGCGATATT | 59.835 | 50.000 | 0.00 | 0.00 | 43.91 | 1.28 |
495 | 496 | 4.148825 | GACCGTCCGCTGCTGGAT | 62.149 | 66.667 | 14.45 | 1.71 | 40.91 | 3.41 |
518 | 519 | 0.521291 | TAGCAATTCAAGGTGCGTGC | 59.479 | 50.000 | 0.00 | 0.00 | 45.62 | 5.34 |
633 | 635 | 9.007901 | AGGAATTGTTCTAAGATCTGTGAAAAG | 57.992 | 33.333 | 10.91 | 0.00 | 0.00 | 2.27 |
641 | 643 | 5.422214 | AAGATCTGTGAAAAGTATCCCGT | 57.578 | 39.130 | 0.00 | 0.00 | 0.00 | 5.28 |
649 | 651 | 5.473846 | TGTGAAAAGTATCCCGTGCATTAAA | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
650 | 652 | 6.027749 | GTGAAAAGTATCCCGTGCATTAAAG | 58.972 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
707 | 709 | 3.525609 | TGTGCCTTGGAGGGTGATATTTA | 59.474 | 43.478 | 0.00 | 0.00 | 35.37 | 1.40 |
716 | 718 | 8.533569 | TTGGAGGGTGATATTTAAAATCCTTC | 57.466 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
731 | 733 | 4.637483 | ATCCTTCATTATTTGCCACACG | 57.363 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
778 | 780 | 8.147058 | ACATGTTGTGGCAAATTATAAAAGTGA | 58.853 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
1034 | 1037 | 1.066002 | CACACAACCAGGACAAGCAAG | 59.934 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
1064 | 1067 | 0.250513 | AGTGTCAGATTTCCCGAGGC | 59.749 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1377 | 1419 | 0.249911 | GCACCGGTGAGAACAAGAGT | 60.250 | 55.000 | 38.30 | 0.00 | 0.00 | 3.24 |
1453 | 1511 | 1.745827 | GCCCGCTACCTTTGCAGAATA | 60.746 | 52.381 | 0.00 | 0.00 | 0.00 | 1.75 |
1494 | 1552 | 5.357257 | ACTTCCACCGTGTATACATGAATC | 58.643 | 41.667 | 23.87 | 3.71 | 34.90 | 2.52 |
1505 | 1563 | 7.531198 | CGTGTATACATGAATCGAGTCTAGTTC | 59.469 | 40.741 | 18.59 | 0.68 | 34.90 | 3.01 |
1525 | 1583 | 3.151554 | TCAACTAGCTCACTTGGTCGTA | 58.848 | 45.455 | 0.00 | 0.00 | 0.00 | 3.43 |
1571 | 1646 | 2.413310 | ACAGTGTGTCGAGGGTTTTT | 57.587 | 45.000 | 0.00 | 0.00 | 0.00 | 1.94 |
1660 | 1736 | 8.642432 | TGCTATGGCATCTAATATACATACTCC | 58.358 | 37.037 | 1.65 | 0.00 | 44.28 | 3.85 |
1662 | 1738 | 9.373450 | CTATGGCATCTAATATACATACTCCCT | 57.627 | 37.037 | 1.65 | 0.00 | 0.00 | 4.20 |
1663 | 1739 | 7.661536 | TGGCATCTAATATACATACTCCCTC | 57.338 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1664 | 1740 | 7.422512 | TGGCATCTAATATACATACTCCCTCT | 58.577 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
1665 | 1741 | 7.343057 | TGGCATCTAATATACATACTCCCTCTG | 59.657 | 40.741 | 0.00 | 0.00 | 0.00 | 3.35 |
1666 | 1742 | 7.343316 | GGCATCTAATATACATACTCCCTCTGT | 59.657 | 40.741 | 0.00 | 0.00 | 0.00 | 3.41 |
1667 | 1743 | 8.410141 | GCATCTAATATACATACTCCCTCTGTC | 58.590 | 40.741 | 0.00 | 0.00 | 0.00 | 3.51 |
1668 | 1744 | 8.908903 | CATCTAATATACATACTCCCTCTGTCC | 58.091 | 40.741 | 0.00 | 0.00 | 0.00 | 4.02 |
1669 | 1745 | 7.411808 | TCTAATATACATACTCCCTCTGTCCC | 58.588 | 42.308 | 0.00 | 0.00 | 0.00 | 4.46 |
1670 | 1746 | 3.993658 | ATACATACTCCCTCTGTCCCA | 57.006 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
1671 | 1747 | 2.642171 | ACATACTCCCTCTGTCCCAA | 57.358 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
1672 | 1748 | 2.915869 | ACATACTCCCTCTGTCCCAAA | 58.084 | 47.619 | 0.00 | 0.00 | 0.00 | 3.28 |
1673 | 1749 | 3.256704 | ACATACTCCCTCTGTCCCAAAA | 58.743 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
1674 | 1750 | 3.852578 | ACATACTCCCTCTGTCCCAAAAT | 59.147 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
1675 | 1751 | 5.036916 | ACATACTCCCTCTGTCCCAAAATA | 58.963 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
1676 | 1752 | 5.491078 | ACATACTCCCTCTGTCCCAAAATAA | 59.509 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1677 | 1753 | 4.576330 | ACTCCCTCTGTCCCAAAATAAG | 57.424 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
1678 | 1754 | 3.916989 | ACTCCCTCTGTCCCAAAATAAGT | 59.083 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
1679 | 1755 | 4.263506 | ACTCCCTCTGTCCCAAAATAAGTG | 60.264 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
1680 | 1756 | 3.655777 | TCCCTCTGTCCCAAAATAAGTGT | 59.344 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
1681 | 1757 | 4.010349 | CCCTCTGTCCCAAAATAAGTGTC | 58.990 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
1682 | 1758 | 4.263506 | CCCTCTGTCCCAAAATAAGTGTCT | 60.264 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
1683 | 1759 | 4.938226 | CCTCTGTCCCAAAATAAGTGTCTC | 59.062 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
1684 | 1760 | 5.513094 | CCTCTGTCCCAAAATAAGTGTCTCA | 60.513 | 44.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1685 | 1761 | 5.935945 | TCTGTCCCAAAATAAGTGTCTCAA | 58.064 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
1686 | 1762 | 5.763204 | TCTGTCCCAAAATAAGTGTCTCAAC | 59.237 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1687 | 1763 | 5.690865 | TGTCCCAAAATAAGTGTCTCAACT | 58.309 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
1688 | 1764 | 6.126409 | TGTCCCAAAATAAGTGTCTCAACTT | 58.874 | 36.000 | 0.00 | 0.00 | 42.89 | 2.66 |
1689 | 1765 | 6.605594 | TGTCCCAAAATAAGTGTCTCAACTTT | 59.394 | 34.615 | 0.00 | 0.00 | 40.77 | 2.66 |
1690 | 1766 | 6.918022 | GTCCCAAAATAAGTGTCTCAACTTTG | 59.082 | 38.462 | 0.00 | 0.00 | 40.77 | 2.77 |
1691 | 1767 | 5.691754 | CCCAAAATAAGTGTCTCAACTTTGC | 59.308 | 40.000 | 0.00 | 0.00 | 40.77 | 3.68 |
1692 | 1768 | 6.272318 | CCAAAATAAGTGTCTCAACTTTGCA | 58.728 | 36.000 | 0.00 | 0.00 | 40.77 | 4.08 |
1693 | 1769 | 6.198966 | CCAAAATAAGTGTCTCAACTTTGCAC | 59.801 | 38.462 | 0.00 | 0.00 | 40.77 | 4.57 |
1694 | 1770 | 6.699575 | AAATAAGTGTCTCAACTTTGCACT | 57.300 | 33.333 | 0.00 | 0.00 | 40.77 | 4.40 |
1695 | 1771 | 7.801716 | AAATAAGTGTCTCAACTTTGCACTA | 57.198 | 32.000 | 0.00 | 0.00 | 40.77 | 2.74 |
1696 | 1772 | 7.801716 | AATAAGTGTCTCAACTTTGCACTAA | 57.198 | 32.000 | 0.00 | 0.00 | 40.77 | 2.24 |
1697 | 1773 | 5.485662 | AAGTGTCTCAACTTTGCACTAAC | 57.514 | 39.130 | 0.00 | 0.00 | 37.05 | 2.34 |
1698 | 1774 | 4.770795 | AGTGTCTCAACTTTGCACTAACT | 58.229 | 39.130 | 0.00 | 0.00 | 38.46 | 2.24 |
1699 | 1775 | 5.186198 | AGTGTCTCAACTTTGCACTAACTT | 58.814 | 37.500 | 0.00 | 0.00 | 38.46 | 2.66 |
1700 | 1776 | 5.648092 | AGTGTCTCAACTTTGCACTAACTTT | 59.352 | 36.000 | 0.00 | 0.00 | 38.46 | 2.66 |
1701 | 1777 | 6.821665 | AGTGTCTCAACTTTGCACTAACTTTA | 59.178 | 34.615 | 0.00 | 0.00 | 38.46 | 1.85 |
1702 | 1778 | 7.011482 | AGTGTCTCAACTTTGCACTAACTTTAG | 59.989 | 37.037 | 0.00 | 0.00 | 38.46 | 1.85 |
1703 | 1779 | 6.821665 | TGTCTCAACTTTGCACTAACTTTAGT | 59.178 | 34.615 | 0.00 | 0.00 | 44.42 | 2.24 |
1704 | 1780 | 7.982919 | TGTCTCAACTTTGCACTAACTTTAGTA | 59.017 | 33.333 | 1.30 | 0.00 | 41.82 | 1.82 |
1705 | 1781 | 8.274248 | GTCTCAACTTTGCACTAACTTTAGTAC | 58.726 | 37.037 | 1.30 | 0.00 | 41.82 | 2.73 |
1706 | 1782 | 7.982919 | TCTCAACTTTGCACTAACTTTAGTACA | 59.017 | 33.333 | 1.30 | 0.00 | 41.82 | 2.90 |
1707 | 1783 | 8.495361 | TCAACTTTGCACTAACTTTAGTACAA | 57.505 | 30.769 | 9.74 | 9.74 | 42.33 | 2.41 |
1708 | 1784 | 8.948145 | TCAACTTTGCACTAACTTTAGTACAAA | 58.052 | 29.630 | 19.50 | 19.50 | 46.64 | 2.83 |
1742 | 1818 | 8.528044 | AAAGTTAAGACACTTATTTTGGGACA | 57.472 | 30.769 | 0.00 | 0.00 | 35.87 | 4.02 |
1743 | 1819 | 7.745620 | AGTTAAGACACTTATTTTGGGACAG | 57.254 | 36.000 | 0.00 | 0.00 | 42.39 | 3.51 |
1744 | 1820 | 7.514721 | AGTTAAGACACTTATTTTGGGACAGA | 58.485 | 34.615 | 0.00 | 0.00 | 42.39 | 3.41 |
1745 | 1821 | 7.661847 | AGTTAAGACACTTATTTTGGGACAGAG | 59.338 | 37.037 | 0.00 | 0.00 | 42.39 | 3.35 |
1746 | 1822 | 4.911390 | AGACACTTATTTTGGGACAGAGG | 58.089 | 43.478 | 0.00 | 0.00 | 42.39 | 3.69 |
1747 | 1823 | 4.597507 | AGACACTTATTTTGGGACAGAGGA | 59.402 | 41.667 | 0.00 | 0.00 | 42.39 | 3.71 |
1872 | 1950 | 3.434299 | ACAAACTAATTACTTCCACGCGG | 59.566 | 43.478 | 12.47 | 0.00 | 0.00 | 6.46 |
1909 | 1987 | 4.436332 | CAAGGATGATCAACGACTGATGA | 58.564 | 43.478 | 0.00 | 2.36 | 45.23 | 2.92 |
1922 | 2000 | 5.471257 | ACGACTGATGATGATGATGATGAG | 58.529 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
1975 | 2068 | 0.608130 | CGGTGAACAGTGATGGAGGA | 59.392 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1976 | 2069 | 1.673033 | CGGTGAACAGTGATGGAGGAC | 60.673 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
2183 | 2281 | 0.942410 | TCGTGGCGCACTAAACAGAC | 60.942 | 55.000 | 10.83 | 0.00 | 31.34 | 3.51 |
2205 | 2303 | 7.857389 | CAGACCATATGAAAATAATTGGACGTG | 59.143 | 37.037 | 3.65 | 0.00 | 0.00 | 4.49 |
2219 | 2317 | 5.384063 | TTGGACGTGCACAAATTATGATT | 57.616 | 34.783 | 18.64 | 0.00 | 0.00 | 2.57 |
2241 | 2339 | 9.466497 | TGATTTTCCATAGATGATTTATAGGGC | 57.534 | 33.333 | 0.00 | 0.00 | 0.00 | 5.19 |
2433 | 2531 | 2.189594 | CACAAGAAGTGGATGGAGCA | 57.810 | 50.000 | 0.00 | 0.00 | 44.69 | 4.26 |
2445 | 2543 | 4.301027 | GGAGCACCCCGCCGATAG | 62.301 | 72.222 | 0.00 | 0.00 | 44.04 | 2.08 |
2458 | 2556 | 1.300233 | CGATAGGAAGGTGGCTCGC | 60.300 | 63.158 | 0.00 | 0.00 | 0.00 | 5.03 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2 | 3 | 0.104304 | AACTAGACGCGCCTAATGGG | 59.896 | 55.000 | 5.73 | 0.00 | 38.36 | 4.00 |
3 | 4 | 2.607282 | CCTAACTAGACGCGCCTAATGG | 60.607 | 54.545 | 5.73 | 0.55 | 0.00 | 3.16 |
4 | 5 | 2.607282 | CCCTAACTAGACGCGCCTAATG | 60.607 | 54.545 | 5.73 | 0.00 | 0.00 | 1.90 |
5 | 6 | 1.612463 | CCCTAACTAGACGCGCCTAAT | 59.388 | 52.381 | 5.73 | 0.00 | 0.00 | 1.73 |
6 | 7 | 1.027357 | CCCTAACTAGACGCGCCTAA | 58.973 | 55.000 | 5.73 | 0.00 | 0.00 | 2.69 |
7 | 8 | 0.820891 | CCCCTAACTAGACGCGCCTA | 60.821 | 60.000 | 5.73 | 3.18 | 0.00 | 3.93 |
8 | 9 | 2.125961 | CCCCTAACTAGACGCGCCT | 61.126 | 63.158 | 5.73 | 1.58 | 0.00 | 5.52 |
9 | 10 | 2.416260 | CCCCTAACTAGACGCGCC | 59.584 | 66.667 | 5.73 | 0.00 | 0.00 | 6.53 |
10 | 11 | 2.279318 | GCCCCTAACTAGACGCGC | 60.279 | 66.667 | 5.73 | 0.00 | 0.00 | 6.86 |
11 | 12 | 1.001597 | CTAAGCCCCTAACTAGACGCG | 60.002 | 57.143 | 3.53 | 3.53 | 0.00 | 6.01 |
12 | 13 | 1.269673 | GCTAAGCCCCTAACTAGACGC | 60.270 | 57.143 | 0.00 | 0.00 | 0.00 | 5.19 |
13 | 14 | 1.340568 | GGCTAAGCCCCTAACTAGACG | 59.659 | 57.143 | 0.00 | 0.00 | 44.06 | 4.18 |
70 | 71 | 8.695456 | CCAAAAGGTTGCCTTATATCTGTTTAT | 58.305 | 33.333 | 0.37 | 0.00 | 43.92 | 1.40 |
71 | 72 | 7.891183 | TCCAAAAGGTTGCCTTATATCTGTTTA | 59.109 | 33.333 | 0.37 | 0.00 | 43.92 | 2.01 |
72 | 73 | 6.723977 | TCCAAAAGGTTGCCTTATATCTGTTT | 59.276 | 34.615 | 0.37 | 0.00 | 43.92 | 2.83 |
73 | 74 | 6.252995 | TCCAAAAGGTTGCCTTATATCTGTT | 58.747 | 36.000 | 0.37 | 0.00 | 43.92 | 3.16 |
74 | 75 | 5.826643 | TCCAAAAGGTTGCCTTATATCTGT | 58.173 | 37.500 | 0.37 | 0.00 | 43.92 | 3.41 |
75 | 76 | 6.773976 | TTCCAAAAGGTTGCCTTATATCTG | 57.226 | 37.500 | 0.37 | 0.00 | 43.92 | 2.90 |
76 | 77 | 7.978099 | AATTCCAAAAGGTTGCCTTATATCT | 57.022 | 32.000 | 0.37 | 0.00 | 43.92 | 1.98 |
77 | 78 | 9.750125 | CTTAATTCCAAAAGGTTGCCTTATATC | 57.250 | 33.333 | 0.37 | 0.00 | 43.92 | 1.63 |
78 | 79 | 8.204160 | GCTTAATTCCAAAAGGTTGCCTTATAT | 58.796 | 33.333 | 0.37 | 0.00 | 43.92 | 0.86 |
79 | 80 | 7.179338 | TGCTTAATTCCAAAAGGTTGCCTTATA | 59.821 | 33.333 | 0.37 | 0.00 | 43.92 | 0.98 |
80 | 81 | 6.013812 | TGCTTAATTCCAAAAGGTTGCCTTAT | 60.014 | 34.615 | 0.37 | 0.00 | 43.92 | 1.73 |
81 | 82 | 5.305644 | TGCTTAATTCCAAAAGGTTGCCTTA | 59.694 | 36.000 | 0.37 | 0.00 | 43.92 | 2.69 |
83 | 84 | 3.645687 | TGCTTAATTCCAAAAGGTTGCCT | 59.354 | 39.130 | 0.00 | 0.00 | 33.01 | 4.75 |
84 | 85 | 4.001618 | TGCTTAATTCCAAAAGGTTGCC | 57.998 | 40.909 | 0.00 | 0.00 | 33.01 | 4.52 |
85 | 86 | 7.387673 | ACTTATTGCTTAATTCCAAAAGGTTGC | 59.612 | 33.333 | 0.00 | 0.00 | 33.01 | 4.17 |
86 | 87 | 8.831715 | ACTTATTGCTTAATTCCAAAAGGTTG | 57.168 | 30.769 | 0.00 | 0.00 | 34.25 | 3.77 |
87 | 88 | 8.646900 | TGACTTATTGCTTAATTCCAAAAGGTT | 58.353 | 29.630 | 0.00 | 0.00 | 0.00 | 3.50 |
88 | 89 | 8.189119 | TGACTTATTGCTTAATTCCAAAAGGT | 57.811 | 30.769 | 0.00 | 0.00 | 0.00 | 3.50 |
99 | 100 | 8.846211 | GGGCAATAGTTATGACTTATTGCTTAA | 58.154 | 33.333 | 25.61 | 1.09 | 43.29 | 1.85 |
100 | 101 | 7.172532 | CGGGCAATAGTTATGACTTATTGCTTA | 59.827 | 37.037 | 25.61 | 1.64 | 43.29 | 3.09 |
101 | 102 | 6.017109 | CGGGCAATAGTTATGACTTATTGCTT | 60.017 | 38.462 | 25.61 | 3.75 | 43.29 | 3.91 |
102 | 103 | 5.470098 | CGGGCAATAGTTATGACTTATTGCT | 59.530 | 40.000 | 25.61 | 0.00 | 43.29 | 3.91 |
103 | 104 | 5.468746 | TCGGGCAATAGTTATGACTTATTGC | 59.531 | 40.000 | 22.37 | 22.37 | 43.19 | 3.56 |
104 | 105 | 6.706270 | AGTCGGGCAATAGTTATGACTTATTG | 59.294 | 38.462 | 0.00 | 5.66 | 37.33 | 1.90 |
105 | 106 | 6.827727 | AGTCGGGCAATAGTTATGACTTATT | 58.172 | 36.000 | 0.00 | 0.00 | 37.33 | 1.40 |
106 | 107 | 6.420913 | AGTCGGGCAATAGTTATGACTTAT | 57.579 | 37.500 | 0.00 | 0.00 | 37.33 | 1.73 |
107 | 108 | 5.221382 | GGAGTCGGGCAATAGTTATGACTTA | 60.221 | 44.000 | 0.00 | 0.00 | 35.52 | 2.24 |
108 | 109 | 4.443034 | GGAGTCGGGCAATAGTTATGACTT | 60.443 | 45.833 | 0.00 | 0.00 | 35.52 | 3.01 |
109 | 110 | 3.069729 | GGAGTCGGGCAATAGTTATGACT | 59.930 | 47.826 | 0.00 | 0.00 | 37.87 | 3.41 |
110 | 111 | 3.391049 | GGAGTCGGGCAATAGTTATGAC | 58.609 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
111 | 112 | 2.367567 | GGGAGTCGGGCAATAGTTATGA | 59.632 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
112 | 113 | 2.550208 | GGGGAGTCGGGCAATAGTTATG | 60.550 | 54.545 | 0.00 | 0.00 | 0.00 | 1.90 |
113 | 114 | 1.697982 | GGGGAGTCGGGCAATAGTTAT | 59.302 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
114 | 115 | 1.125633 | GGGGAGTCGGGCAATAGTTA | 58.874 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
115 | 116 | 0.620700 | AGGGGAGTCGGGCAATAGTT | 60.621 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
116 | 117 | 0.620700 | AAGGGGAGTCGGGCAATAGT | 60.621 | 55.000 | 0.00 | 0.00 | 0.00 | 2.12 |
117 | 118 | 1.344763 | CTAAGGGGAGTCGGGCAATAG | 59.655 | 57.143 | 0.00 | 0.00 | 0.00 | 1.73 |
118 | 119 | 1.420430 | CTAAGGGGAGTCGGGCAATA | 58.580 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
119 | 120 | 1.345715 | CCTAAGGGGAGTCGGGCAAT | 61.346 | 60.000 | 0.00 | 0.00 | 37.23 | 3.56 |
120 | 121 | 1.993391 | CCTAAGGGGAGTCGGGCAA | 60.993 | 63.158 | 0.00 | 0.00 | 37.23 | 4.52 |
121 | 122 | 2.365105 | CCTAAGGGGAGTCGGGCA | 60.365 | 66.667 | 0.00 | 0.00 | 37.23 | 5.36 |
122 | 123 | 2.042230 | TCCTAAGGGGAGTCGGGC | 60.042 | 66.667 | 0.00 | 0.00 | 39.58 | 6.13 |
129 | 130 | 0.620700 | GGTTCTGGCTCCTAAGGGGA | 60.621 | 60.000 | 0.00 | 0.00 | 42.77 | 4.81 |
130 | 131 | 1.636769 | GGGTTCTGGCTCCTAAGGGG | 61.637 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
131 | 132 | 0.621862 | AGGGTTCTGGCTCCTAAGGG | 60.622 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
132 | 133 | 2.176247 | TAGGGTTCTGGCTCCTAAGG | 57.824 | 55.000 | 0.00 | 0.00 | 30.91 | 2.69 |
133 | 134 | 3.370633 | GGTTTAGGGTTCTGGCTCCTAAG | 60.371 | 52.174 | 0.00 | 0.00 | 42.12 | 2.18 |
134 | 135 | 2.574824 | GGTTTAGGGTTCTGGCTCCTAA | 59.425 | 50.000 | 0.00 | 0.00 | 40.26 | 2.69 |
135 | 136 | 2.193993 | GGTTTAGGGTTCTGGCTCCTA | 58.806 | 52.381 | 0.00 | 0.00 | 32.46 | 2.94 |
136 | 137 | 0.992695 | GGTTTAGGGTTCTGGCTCCT | 59.007 | 55.000 | 0.00 | 0.00 | 34.85 | 3.69 |
137 | 138 | 0.034380 | GGGTTTAGGGTTCTGGCTCC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
138 | 139 | 0.992695 | AGGGTTTAGGGTTCTGGCTC | 59.007 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
139 | 140 | 2.197465 | CTAGGGTTTAGGGTTCTGGCT | 58.803 | 52.381 | 0.00 | 0.00 | 0.00 | 4.75 |
140 | 141 | 1.408405 | GCTAGGGTTTAGGGTTCTGGC | 60.408 | 57.143 | 0.00 | 0.00 | 0.00 | 4.85 |
141 | 142 | 1.134491 | CGCTAGGGTTTAGGGTTCTGG | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
142 | 143 | 1.742750 | GCGCTAGGGTTTAGGGTTCTG | 60.743 | 57.143 | 8.77 | 0.00 | 0.00 | 3.02 |
143 | 144 | 0.540454 | GCGCTAGGGTTTAGGGTTCT | 59.460 | 55.000 | 8.77 | 0.00 | 0.00 | 3.01 |
144 | 145 | 0.463295 | GGCGCTAGGGTTTAGGGTTC | 60.463 | 60.000 | 7.64 | 0.00 | 0.00 | 3.62 |
145 | 146 | 0.912968 | AGGCGCTAGGGTTTAGGGTT | 60.913 | 55.000 | 7.64 | 0.00 | 0.00 | 4.11 |
146 | 147 | 1.306739 | AGGCGCTAGGGTTTAGGGT | 60.307 | 57.895 | 7.64 | 0.00 | 0.00 | 4.34 |
147 | 148 | 1.049289 | AGAGGCGCTAGGGTTTAGGG | 61.049 | 60.000 | 7.64 | 0.00 | 0.00 | 3.53 |
148 | 149 | 0.389757 | GAGAGGCGCTAGGGTTTAGG | 59.610 | 60.000 | 7.64 | 0.00 | 0.00 | 2.69 |
149 | 150 | 1.112113 | TGAGAGGCGCTAGGGTTTAG | 58.888 | 55.000 | 7.64 | 0.00 | 0.00 | 1.85 |
150 | 151 | 0.822164 | GTGAGAGGCGCTAGGGTTTA | 59.178 | 55.000 | 7.64 | 0.00 | 0.00 | 2.01 |
151 | 152 | 1.597461 | GTGAGAGGCGCTAGGGTTT | 59.403 | 57.895 | 7.64 | 0.00 | 0.00 | 3.27 |
152 | 153 | 2.359967 | GGTGAGAGGCGCTAGGGTT | 61.360 | 63.158 | 7.64 | 0.00 | 0.00 | 4.11 |
153 | 154 | 2.760385 | GGTGAGAGGCGCTAGGGT | 60.760 | 66.667 | 7.64 | 0.00 | 0.00 | 4.34 |
154 | 155 | 2.759973 | TGGTGAGAGGCGCTAGGG | 60.760 | 66.667 | 7.64 | 1.65 | 0.00 | 3.53 |
155 | 156 | 2.496817 | GTGGTGAGAGGCGCTAGG | 59.503 | 66.667 | 7.64 | 0.00 | 0.00 | 3.02 |
156 | 157 | 2.496817 | GGTGGTGAGAGGCGCTAG | 59.503 | 66.667 | 7.64 | 0.00 | 0.00 | 3.42 |
157 | 158 | 3.449227 | CGGTGGTGAGAGGCGCTA | 61.449 | 66.667 | 7.64 | 0.00 | 0.00 | 4.26 |
182 | 183 | 4.933064 | GTGATCGCGCGGGAGGAG | 62.933 | 72.222 | 31.69 | 0.00 | 0.00 | 3.69 |
216 | 217 | 4.749310 | AGAGGTTGAGCGCGGCTG | 62.749 | 66.667 | 8.83 | 0.00 | 39.88 | 4.85 |
217 | 218 | 4.443266 | GAGAGGTTGAGCGCGGCT | 62.443 | 66.667 | 8.83 | 5.31 | 43.88 | 5.52 |
218 | 219 | 4.742201 | TGAGAGGTTGAGCGCGGC | 62.742 | 66.667 | 8.83 | 0.00 | 0.00 | 6.53 |
219 | 220 | 2.811317 | GTGAGAGGTTGAGCGCGG | 60.811 | 66.667 | 8.83 | 0.00 | 0.00 | 6.46 |
220 | 221 | 2.811317 | GGTGAGAGGTTGAGCGCG | 60.811 | 66.667 | 0.00 | 0.00 | 0.00 | 6.86 |
221 | 222 | 1.301716 | TTGGTGAGAGGTTGAGCGC | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 5.92 |
222 | 223 | 0.951040 | GGTTGGTGAGAGGTTGAGCG | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
223 | 224 | 0.606673 | GGGTTGGTGAGAGGTTGAGC | 60.607 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
224 | 225 | 0.764890 | TGGGTTGGTGAGAGGTTGAG | 59.235 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
225 | 226 | 0.472471 | GTGGGTTGGTGAGAGGTTGA | 59.528 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
226 | 227 | 0.537371 | GGTGGGTTGGTGAGAGGTTG | 60.537 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
227 | 228 | 0.697854 | AGGTGGGTTGGTGAGAGGTT | 60.698 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
228 | 229 | 1.073706 | AGGTGGGTTGGTGAGAGGT | 60.074 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
229 | 230 | 0.838122 | AGAGGTGGGTTGGTGAGAGG | 60.838 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
230 | 231 | 0.610687 | GAGAGGTGGGTTGGTGAGAG | 59.389 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
231 | 232 | 0.105194 | TGAGAGGTGGGTTGGTGAGA | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
232 | 233 | 0.987294 | ATGAGAGGTGGGTTGGTGAG | 59.013 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
233 | 234 | 0.984230 | GATGAGAGGTGGGTTGGTGA | 59.016 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
234 | 235 | 0.035056 | GGATGAGAGGTGGGTTGGTG | 60.035 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
235 | 236 | 1.208165 | GGGATGAGAGGTGGGTTGGT | 61.208 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
236 | 237 | 0.916358 | AGGGATGAGAGGTGGGTTGG | 60.916 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
237 | 238 | 1.486726 | GTAGGGATGAGAGGTGGGTTG | 59.513 | 57.143 | 0.00 | 0.00 | 0.00 | 3.77 |
238 | 239 | 1.080498 | TGTAGGGATGAGAGGTGGGTT | 59.920 | 52.381 | 0.00 | 0.00 | 0.00 | 4.11 |
239 | 240 | 0.716591 | TGTAGGGATGAGAGGTGGGT | 59.283 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
240 | 241 | 1.486726 | GTTGTAGGGATGAGAGGTGGG | 59.513 | 57.143 | 0.00 | 0.00 | 0.00 | 4.61 |
241 | 242 | 1.486726 | GGTTGTAGGGATGAGAGGTGG | 59.513 | 57.143 | 0.00 | 0.00 | 0.00 | 4.61 |
242 | 243 | 2.472029 | AGGTTGTAGGGATGAGAGGTG | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
243 | 244 | 2.950990 | AGGTTGTAGGGATGAGAGGT | 57.049 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
244 | 245 | 3.639094 | CAGTAGGTTGTAGGGATGAGAGG | 59.361 | 52.174 | 0.00 | 0.00 | 0.00 | 3.69 |
245 | 246 | 4.282496 | ACAGTAGGTTGTAGGGATGAGAG | 58.718 | 47.826 | 0.00 | 0.00 | 0.00 | 3.20 |
246 | 247 | 4.332683 | ACAGTAGGTTGTAGGGATGAGA | 57.667 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
258 | 259 | 1.677552 | CGGGCCTCAACAGTAGGTT | 59.322 | 57.895 | 0.84 | 0.00 | 41.47 | 3.50 |
259 | 260 | 2.291043 | CCGGGCCTCAACAGTAGGT | 61.291 | 63.158 | 0.84 | 0.00 | 36.43 | 3.08 |
260 | 261 | 2.291043 | ACCGGGCCTCAACAGTAGG | 61.291 | 63.158 | 6.32 | 0.00 | 37.17 | 3.18 |
261 | 262 | 1.079127 | CACCGGGCCTCAACAGTAG | 60.079 | 63.158 | 6.32 | 0.00 | 0.00 | 2.57 |
262 | 263 | 1.534476 | TCACCGGGCCTCAACAGTA | 60.534 | 57.895 | 6.32 | 0.00 | 0.00 | 2.74 |
263 | 264 | 2.847234 | TCACCGGGCCTCAACAGT | 60.847 | 61.111 | 6.32 | 0.00 | 0.00 | 3.55 |
264 | 265 | 2.358737 | GTCACCGGGCCTCAACAG | 60.359 | 66.667 | 6.32 | 0.00 | 0.00 | 3.16 |
265 | 266 | 3.948719 | GGTCACCGGGCCTCAACA | 61.949 | 66.667 | 6.32 | 0.00 | 0.00 | 3.33 |
266 | 267 | 4.717313 | GGGTCACCGGGCCTCAAC | 62.717 | 72.222 | 6.32 | 0.00 | 0.00 | 3.18 |
267 | 268 | 3.549433 | TAGGGTCACCGGGCCTCAA | 62.549 | 63.158 | 6.32 | 0.00 | 43.47 | 3.02 |
268 | 269 | 3.976490 | CTAGGGTCACCGGGCCTCA | 62.976 | 68.421 | 6.32 | 0.00 | 43.47 | 3.86 |
269 | 270 | 3.155167 | CTAGGGTCACCGGGCCTC | 61.155 | 72.222 | 6.32 | 0.00 | 43.47 | 4.70 |
272 | 273 | 3.851128 | GAGCTAGGGTCACCGGGC | 61.851 | 72.222 | 6.32 | 0.00 | 43.47 | 6.13 |
273 | 274 | 2.294170 | TAGGAGCTAGGGTCACCGGG | 62.294 | 65.000 | 6.32 | 0.00 | 43.47 | 5.73 |
274 | 275 | 1.108132 | GTAGGAGCTAGGGTCACCGG | 61.108 | 65.000 | 0.00 | 0.00 | 43.47 | 5.28 |
275 | 276 | 1.108132 | GGTAGGAGCTAGGGTCACCG | 61.108 | 65.000 | 0.00 | 0.00 | 43.47 | 4.94 |
276 | 277 | 0.032416 | TGGTAGGAGCTAGGGTCACC | 60.032 | 60.000 | 0.00 | 0.00 | 30.20 | 4.02 |
277 | 278 | 1.063867 | TCTGGTAGGAGCTAGGGTCAC | 60.064 | 57.143 | 0.00 | 0.00 | 0.00 | 3.67 |
278 | 279 | 1.305886 | TCTGGTAGGAGCTAGGGTCA | 58.694 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
279 | 280 | 2.456073 | TTCTGGTAGGAGCTAGGGTC | 57.544 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
280 | 281 | 2.683768 | CATTCTGGTAGGAGCTAGGGT | 58.316 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
281 | 282 | 1.974236 | CCATTCTGGTAGGAGCTAGGG | 59.026 | 57.143 | 0.00 | 0.00 | 31.35 | 3.53 |
282 | 283 | 1.974236 | CCCATTCTGGTAGGAGCTAGG | 59.026 | 57.143 | 0.00 | 0.00 | 35.17 | 3.02 |
283 | 284 | 2.630580 | GTCCCATTCTGGTAGGAGCTAG | 59.369 | 54.545 | 0.00 | 0.00 | 35.17 | 3.42 |
284 | 285 | 2.679082 | GTCCCATTCTGGTAGGAGCTA | 58.321 | 52.381 | 0.00 | 0.00 | 35.17 | 3.32 |
285 | 286 | 1.501582 | GTCCCATTCTGGTAGGAGCT | 58.498 | 55.000 | 0.00 | 0.00 | 35.17 | 4.09 |
286 | 287 | 0.470341 | GGTCCCATTCTGGTAGGAGC | 59.530 | 60.000 | 0.00 | 0.00 | 39.48 | 4.70 |
287 | 288 | 1.765314 | CTGGTCCCATTCTGGTAGGAG | 59.235 | 57.143 | 0.00 | 0.00 | 35.17 | 3.69 |
288 | 289 | 1.625228 | CCTGGTCCCATTCTGGTAGGA | 60.625 | 57.143 | 0.00 | 0.00 | 35.17 | 2.94 |
289 | 290 | 0.839946 | CCTGGTCCCATTCTGGTAGG | 59.160 | 60.000 | 0.00 | 0.00 | 35.17 | 3.18 |
290 | 291 | 1.879575 | TCCTGGTCCCATTCTGGTAG | 58.120 | 55.000 | 0.00 | 0.00 | 35.17 | 3.18 |
291 | 292 | 2.587060 | ATCCTGGTCCCATTCTGGTA | 57.413 | 50.000 | 0.00 | 0.00 | 35.17 | 3.25 |
292 | 293 | 1.686236 | AATCCTGGTCCCATTCTGGT | 58.314 | 50.000 | 0.00 | 0.00 | 35.17 | 4.00 |
293 | 294 | 2.780010 | AGTAATCCTGGTCCCATTCTGG | 59.220 | 50.000 | 0.00 | 0.00 | 37.25 | 3.86 |
294 | 295 | 4.510167 | AAGTAATCCTGGTCCCATTCTG | 57.490 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
295 | 296 | 7.082972 | AGTATAAGTAATCCTGGTCCCATTCT | 58.917 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
296 | 297 | 7.016268 | TGAGTATAAGTAATCCTGGTCCCATTC | 59.984 | 40.741 | 0.00 | 0.00 | 0.00 | 2.67 |
297 | 298 | 6.849697 | TGAGTATAAGTAATCCTGGTCCCATT | 59.150 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
298 | 299 | 6.390504 | TGAGTATAAGTAATCCTGGTCCCAT | 58.609 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
299 | 300 | 5.784023 | TGAGTATAAGTAATCCTGGTCCCA | 58.216 | 41.667 | 0.00 | 0.00 | 0.00 | 4.37 |
300 | 301 | 6.522946 | GTTGAGTATAAGTAATCCTGGTCCC | 58.477 | 44.000 | 0.00 | 0.00 | 0.00 | 4.46 |
301 | 302 | 6.040166 | TCGTTGAGTATAAGTAATCCTGGTCC | 59.960 | 42.308 | 0.00 | 0.00 | 0.00 | 4.46 |
302 | 303 | 7.035840 | TCGTTGAGTATAAGTAATCCTGGTC | 57.964 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
303 | 304 | 7.414222 | TTCGTTGAGTATAAGTAATCCTGGT | 57.586 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
304 | 305 | 8.361139 | AGATTCGTTGAGTATAAGTAATCCTGG | 58.639 | 37.037 | 0.00 | 0.00 | 0.00 | 4.45 |
305 | 306 | 9.186323 | CAGATTCGTTGAGTATAAGTAATCCTG | 57.814 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
306 | 307 | 8.915036 | ACAGATTCGTTGAGTATAAGTAATCCT | 58.085 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
307 | 308 | 8.969267 | CACAGATTCGTTGAGTATAAGTAATCC | 58.031 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
308 | 309 | 9.731819 | TCACAGATTCGTTGAGTATAAGTAATC | 57.268 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
310 | 311 | 9.350357 | GTTCACAGATTCGTTGAGTATAAGTAA | 57.650 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
311 | 312 | 8.517056 | TGTTCACAGATTCGTTGAGTATAAGTA | 58.483 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
312 | 313 | 7.375834 | TGTTCACAGATTCGTTGAGTATAAGT | 58.624 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
313 | 314 | 7.812309 | TGTTCACAGATTCGTTGAGTATAAG | 57.188 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
314 | 315 | 9.516314 | CTATGTTCACAGATTCGTTGAGTATAA | 57.484 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
315 | 316 | 8.683615 | ACTATGTTCACAGATTCGTTGAGTATA | 58.316 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
316 | 317 | 7.489435 | CACTATGTTCACAGATTCGTTGAGTAT | 59.511 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
317 | 318 | 6.806739 | CACTATGTTCACAGATTCGTTGAGTA | 59.193 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
318 | 319 | 5.635280 | CACTATGTTCACAGATTCGTTGAGT | 59.365 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
319 | 320 | 5.445142 | GCACTATGTTCACAGATTCGTTGAG | 60.445 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
320 | 321 | 4.388773 | GCACTATGTTCACAGATTCGTTGA | 59.611 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
321 | 322 | 4.389992 | AGCACTATGTTCACAGATTCGTTG | 59.610 | 41.667 | 0.00 | 0.00 | 0.00 | 4.10 |
322 | 323 | 4.569943 | AGCACTATGTTCACAGATTCGTT | 58.430 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
323 | 324 | 4.177026 | GAGCACTATGTTCACAGATTCGT | 58.823 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
324 | 325 | 4.176271 | TGAGCACTATGTTCACAGATTCG | 58.824 | 43.478 | 0.00 | 0.00 | 32.63 | 3.34 |
325 | 326 | 5.641209 | AGTTGAGCACTATGTTCACAGATTC | 59.359 | 40.000 | 0.00 | 0.00 | 37.33 | 2.52 |
326 | 327 | 5.410746 | CAGTTGAGCACTATGTTCACAGATT | 59.589 | 40.000 | 0.00 | 0.00 | 37.33 | 2.40 |
327 | 328 | 4.934001 | CAGTTGAGCACTATGTTCACAGAT | 59.066 | 41.667 | 0.00 | 0.00 | 37.33 | 2.90 |
328 | 329 | 4.039124 | TCAGTTGAGCACTATGTTCACAGA | 59.961 | 41.667 | 0.00 | 0.00 | 37.33 | 3.41 |
329 | 330 | 4.309933 | TCAGTTGAGCACTATGTTCACAG | 58.690 | 43.478 | 0.00 | 0.00 | 37.33 | 3.66 |
330 | 331 | 4.335400 | TCAGTTGAGCACTATGTTCACA | 57.665 | 40.909 | 0.00 | 0.00 | 37.33 | 3.58 |
331 | 332 | 4.752101 | AGTTCAGTTGAGCACTATGTTCAC | 59.248 | 41.667 | 0.00 | 0.00 | 37.33 | 3.18 |
332 | 333 | 4.960938 | AGTTCAGTTGAGCACTATGTTCA | 58.039 | 39.130 | 0.00 | 0.00 | 35.80 | 3.18 |
333 | 334 | 5.237344 | ACAAGTTCAGTTGAGCACTATGTTC | 59.763 | 40.000 | 1.25 | 0.00 | 32.76 | 3.18 |
334 | 335 | 5.126067 | ACAAGTTCAGTTGAGCACTATGTT | 58.874 | 37.500 | 1.25 | 0.00 | 32.76 | 2.71 |
335 | 336 | 4.708177 | ACAAGTTCAGTTGAGCACTATGT | 58.292 | 39.130 | 1.25 | 0.00 | 32.76 | 2.29 |
336 | 337 | 4.993584 | AGACAAGTTCAGTTGAGCACTATG | 59.006 | 41.667 | 1.25 | 0.00 | 32.76 | 2.23 |
337 | 338 | 5.220710 | AGACAAGTTCAGTTGAGCACTAT | 57.779 | 39.130 | 1.25 | 0.00 | 32.76 | 2.12 |
338 | 339 | 4.672587 | AGACAAGTTCAGTTGAGCACTA | 57.327 | 40.909 | 1.25 | 0.00 | 32.76 | 2.74 |
339 | 340 | 3.550437 | AGACAAGTTCAGTTGAGCACT | 57.450 | 42.857 | 1.25 | 0.00 | 35.35 | 4.40 |
340 | 341 | 4.346129 | CAAAGACAAGTTCAGTTGAGCAC | 58.654 | 43.478 | 1.25 | 0.00 | 0.00 | 4.40 |
341 | 342 | 3.181497 | GCAAAGACAAGTTCAGTTGAGCA | 60.181 | 43.478 | 1.25 | 0.00 | 0.00 | 4.26 |
342 | 343 | 3.065925 | AGCAAAGACAAGTTCAGTTGAGC | 59.934 | 43.478 | 1.25 | 0.00 | 0.00 | 4.26 |
343 | 344 | 4.260948 | GGAGCAAAGACAAGTTCAGTTGAG | 60.261 | 45.833 | 1.25 | 0.00 | 0.00 | 3.02 |
344 | 345 | 3.627577 | GGAGCAAAGACAAGTTCAGTTGA | 59.372 | 43.478 | 1.25 | 0.00 | 0.00 | 3.18 |
345 | 346 | 3.546815 | CGGAGCAAAGACAAGTTCAGTTG | 60.547 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
351 | 352 | 2.052782 | AACCGGAGCAAAGACAAGTT | 57.947 | 45.000 | 9.46 | 0.00 | 0.00 | 2.66 |
365 | 366 | 2.202756 | GCCGAGAGCTGTAACCGG | 60.203 | 66.667 | 0.00 | 0.00 | 42.74 | 5.28 |
366 | 367 | 2.202756 | GGCCGAGAGCTGTAACCG | 60.203 | 66.667 | 0.00 | 0.00 | 43.05 | 4.44 |
382 | 383 | 2.278206 | CGAGATCGGTGCACTCGG | 60.278 | 66.667 | 17.98 | 6.78 | 46.10 | 4.63 |
473 | 474 | 2.746277 | GCAGCGGACGGTCCAATT | 60.746 | 61.111 | 25.80 | 8.45 | 35.91 | 2.32 |
474 | 475 | 3.706373 | AGCAGCGGACGGTCCAAT | 61.706 | 61.111 | 25.80 | 11.33 | 35.91 | 3.16 |
494 | 495 | 5.581605 | CACGCACCTTGAATTGCTATTTAT | 58.418 | 37.500 | 0.00 | 0.00 | 36.54 | 1.40 |
495 | 496 | 4.674101 | GCACGCACCTTGAATTGCTATTTA | 60.674 | 41.667 | 0.00 | 0.00 | 36.54 | 1.40 |
541 | 542 | 7.969314 | TGATTTTGTGCTTTGGTTTAAAAGTC | 58.031 | 30.769 | 0.00 | 0.00 | 39.02 | 3.01 |
633 | 635 | 7.807907 | CCATATTTTCTTTAATGCACGGGATAC | 59.192 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
641 | 643 | 7.148672 | CGTGCAAACCATATTTTCTTTAATGCA | 60.149 | 33.333 | 0.00 | 0.00 | 36.65 | 3.96 |
649 | 651 | 3.823873 | TCACCGTGCAAACCATATTTTCT | 59.176 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
650 | 652 | 3.917985 | GTCACCGTGCAAACCATATTTTC | 59.082 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
707 | 709 | 5.868801 | CGTGTGGCAAATAATGAAGGATTTT | 59.131 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
716 | 718 | 1.815613 | TGGTCCGTGTGGCAAATAATG | 59.184 | 47.619 | 0.00 | 0.00 | 34.14 | 1.90 |
731 | 733 | 2.032681 | GCTGACAGGTGGTGGTCC | 59.967 | 66.667 | 4.26 | 0.00 | 33.09 | 4.46 |
791 | 793 | 3.308402 | CCTGACAATAAAGAGGAGCCCAA | 60.308 | 47.826 | 0.00 | 0.00 | 0.00 | 4.12 |
920 | 923 | 1.224069 | CGTGTGCTCTTGTGAGTGGG | 61.224 | 60.000 | 0.00 | 0.00 | 42.13 | 4.61 |
1034 | 1037 | 0.250038 | TCTGACACTGGTTCTGCTGC | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
1064 | 1067 | 1.400629 | CCATCTTGCGCTCAACTTGTG | 60.401 | 52.381 | 9.73 | 0.00 | 0.00 | 3.33 |
1260 | 1302 | 3.150949 | CCAGTGGTCTGCTGGTGA | 58.849 | 61.111 | 0.00 | 0.00 | 46.22 | 4.02 |
1269 | 1311 | 1.745489 | GCCGGTCATTCCAGTGGTC | 60.745 | 63.158 | 9.54 | 0.00 | 35.57 | 4.02 |
1377 | 1419 | 5.955961 | TGTCCTTGATCTTGTCCATGATA | 57.044 | 39.130 | 0.00 | 0.00 | 0.00 | 2.15 |
1453 | 1511 | 7.451566 | GGTGGAAGTTGGCCATCTTATTATATT | 59.548 | 37.037 | 25.58 | 4.70 | 37.81 | 1.28 |
1505 | 1563 | 2.440539 | ACGACCAAGTGAGCTAGTTG | 57.559 | 50.000 | 0.00 | 0.00 | 39.06 | 3.16 |
1525 | 1583 | 4.463891 | CCATGAAAGCTTAAACCCAGATGT | 59.536 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
1571 | 1646 | 9.371136 | TCAAAGTATGCAAATTGTAAACAAACA | 57.629 | 25.926 | 0.00 | 0.00 | 39.55 | 2.83 |
1653 | 1729 | 4.510167 | ATTTTGGGACAGAGGGAGTATG | 57.490 | 45.455 | 0.00 | 0.00 | 42.39 | 2.39 |
1657 | 1733 | 4.263506 | ACACTTATTTTGGGACAGAGGGAG | 60.264 | 45.833 | 0.00 | 0.00 | 42.39 | 4.30 |
1658 | 1734 | 3.655777 | ACACTTATTTTGGGACAGAGGGA | 59.344 | 43.478 | 0.00 | 0.00 | 42.39 | 4.20 |
1659 | 1735 | 4.010349 | GACACTTATTTTGGGACAGAGGG | 58.990 | 47.826 | 0.00 | 0.00 | 42.39 | 4.30 |
1660 | 1736 | 4.911390 | AGACACTTATTTTGGGACAGAGG | 58.089 | 43.478 | 0.00 | 0.00 | 42.39 | 3.69 |
1662 | 1738 | 5.560722 | TGAGACACTTATTTTGGGACAGA | 57.439 | 39.130 | 0.00 | 0.00 | 42.39 | 3.41 |
1663 | 1739 | 5.765182 | AGTTGAGACACTTATTTTGGGACAG | 59.235 | 40.000 | 0.00 | 0.00 | 42.39 | 3.51 |
1664 | 1740 | 5.690865 | AGTTGAGACACTTATTTTGGGACA | 58.309 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
1665 | 1741 | 6.635030 | AAGTTGAGACACTTATTTTGGGAC | 57.365 | 37.500 | 0.00 | 0.00 | 35.10 | 4.46 |
1666 | 1742 | 6.460953 | GCAAAGTTGAGACACTTATTTTGGGA | 60.461 | 38.462 | 0.00 | 0.00 | 35.87 | 4.37 |
1667 | 1743 | 5.691754 | GCAAAGTTGAGACACTTATTTTGGG | 59.308 | 40.000 | 0.00 | 0.00 | 35.87 | 4.12 |
1668 | 1744 | 6.198966 | GTGCAAAGTTGAGACACTTATTTTGG | 59.801 | 38.462 | 0.00 | 0.00 | 35.87 | 3.28 |
1669 | 1745 | 6.974622 | AGTGCAAAGTTGAGACACTTATTTTG | 59.025 | 34.615 | 0.00 | 0.00 | 38.38 | 2.44 |
1670 | 1746 | 7.100458 | AGTGCAAAGTTGAGACACTTATTTT | 57.900 | 32.000 | 0.00 | 0.00 | 38.38 | 1.82 |
1671 | 1747 | 6.699575 | AGTGCAAAGTTGAGACACTTATTT | 57.300 | 33.333 | 0.00 | 0.00 | 38.38 | 1.40 |
1672 | 1748 | 7.499232 | AGTTAGTGCAAAGTTGAGACACTTATT | 59.501 | 33.333 | 7.72 | 0.00 | 41.56 | 1.40 |
1673 | 1749 | 6.992715 | AGTTAGTGCAAAGTTGAGACACTTAT | 59.007 | 34.615 | 7.72 | 0.00 | 41.56 | 1.73 |
1674 | 1750 | 6.346096 | AGTTAGTGCAAAGTTGAGACACTTA | 58.654 | 36.000 | 7.72 | 0.00 | 41.56 | 2.24 |
1675 | 1751 | 5.186198 | AGTTAGTGCAAAGTTGAGACACTT | 58.814 | 37.500 | 7.72 | 0.00 | 41.56 | 3.16 |
1676 | 1752 | 4.770795 | AGTTAGTGCAAAGTTGAGACACT | 58.229 | 39.130 | 0.00 | 0.00 | 43.60 | 3.55 |
1677 | 1753 | 5.485662 | AAGTTAGTGCAAAGTTGAGACAC | 57.514 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
1678 | 1754 | 6.821665 | ACTAAAGTTAGTGCAAAGTTGAGACA | 59.178 | 34.615 | 9.27 | 0.00 | 42.13 | 3.41 |
1679 | 1755 | 7.247929 | ACTAAAGTTAGTGCAAAGTTGAGAC | 57.752 | 36.000 | 9.27 | 0.00 | 42.13 | 3.36 |
1680 | 1756 | 8.361592 | GTACTAAAGTTAGTGCAAAGTTGAGA | 57.638 | 34.615 | 12.92 | 0.00 | 43.22 | 3.27 |
1716 | 1792 | 9.629878 | TGTCCCAAAATAAGTGTCTTAACTTTA | 57.370 | 29.630 | 0.00 | 0.00 | 40.77 | 1.85 |
1717 | 1793 | 8.528044 | TGTCCCAAAATAAGTGTCTTAACTTT | 57.472 | 30.769 | 0.00 | 0.00 | 40.77 | 2.66 |
1718 | 1794 | 7.996644 | TCTGTCCCAAAATAAGTGTCTTAACTT | 59.003 | 33.333 | 0.00 | 0.00 | 42.89 | 2.66 |
1719 | 1795 | 7.514721 | TCTGTCCCAAAATAAGTGTCTTAACT | 58.485 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
1720 | 1796 | 7.094762 | CCTCTGTCCCAAAATAAGTGTCTTAAC | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 2.01 |
1721 | 1797 | 6.940298 | CCTCTGTCCCAAAATAAGTGTCTTAA | 59.060 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
1722 | 1798 | 6.271391 | TCCTCTGTCCCAAAATAAGTGTCTTA | 59.729 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
1723 | 1799 | 5.073144 | TCCTCTGTCCCAAAATAAGTGTCTT | 59.927 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1724 | 1800 | 4.597507 | TCCTCTGTCCCAAAATAAGTGTCT | 59.402 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1725 | 1801 | 4.906618 | TCCTCTGTCCCAAAATAAGTGTC | 58.093 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
1726 | 1802 | 4.993705 | TCCTCTGTCCCAAAATAAGTGT | 57.006 | 40.909 | 0.00 | 0.00 | 0.00 | 3.55 |
1727 | 1803 | 5.316987 | ACTTCCTCTGTCCCAAAATAAGTG | 58.683 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1728 | 1804 | 5.584551 | ACTTCCTCTGTCCCAAAATAAGT | 57.415 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
1729 | 1805 | 9.331282 | CTTATACTTCCTCTGTCCCAAAATAAG | 57.669 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
1730 | 1806 | 7.773690 | GCTTATACTTCCTCTGTCCCAAAATAA | 59.226 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
1731 | 1807 | 7.092623 | TGCTTATACTTCCTCTGTCCCAAAATA | 60.093 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
1732 | 1808 | 6.122964 | GCTTATACTTCCTCTGTCCCAAAAT | 58.877 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1733 | 1809 | 5.013704 | TGCTTATACTTCCTCTGTCCCAAAA | 59.986 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1734 | 1810 | 4.534500 | TGCTTATACTTCCTCTGTCCCAAA | 59.466 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
1735 | 1811 | 4.101114 | TGCTTATACTTCCTCTGTCCCAA | 58.899 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
1736 | 1812 | 3.719871 | TGCTTATACTTCCTCTGTCCCA | 58.280 | 45.455 | 0.00 | 0.00 | 0.00 | 4.37 |
1737 | 1813 | 4.755266 | TTGCTTATACTTCCTCTGTCCC | 57.245 | 45.455 | 0.00 | 0.00 | 0.00 | 4.46 |
1738 | 1814 | 6.116126 | ACATTTGCTTATACTTCCTCTGTCC | 58.884 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1739 | 1815 | 7.617041 | AACATTTGCTTATACTTCCTCTGTC | 57.383 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1740 | 1816 | 9.167311 | CTTAACATTTGCTTATACTTCCTCTGT | 57.833 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1741 | 1817 | 9.167311 | ACTTAACATTTGCTTATACTTCCTCTG | 57.833 | 33.333 | 0.00 | 0.00 | 0.00 | 3.35 |
1742 | 1818 | 9.740710 | AACTTAACATTTGCTTATACTTCCTCT | 57.259 | 29.630 | 0.00 | 0.00 | 0.00 | 3.69 |
1880 | 1958 | 2.097825 | GTTGATCATCCTTGCTTGCCT | 58.902 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
1881 | 1959 | 1.202222 | CGTTGATCATCCTTGCTTGCC | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
1909 | 1987 | 3.009253 | GCCTTCCTCCTCATCATCATCAT | 59.991 | 47.826 | 0.00 | 0.00 | 0.00 | 2.45 |
1922 | 2000 | 1.077858 | CAGCTTCCTGCCTTCCTCC | 60.078 | 63.158 | 0.00 | 0.00 | 44.23 | 4.30 |
1968 | 2061 | 1.002888 | CTTGTCTGTGCTGTCCTCCAT | 59.997 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1975 | 2068 | 1.605710 | GCATTGACTTGTCTGTGCTGT | 59.394 | 47.619 | 17.12 | 0.00 | 0.00 | 4.40 |
1976 | 2069 | 1.878088 | AGCATTGACTTGTCTGTGCTG | 59.122 | 47.619 | 22.36 | 7.80 | 40.99 | 4.41 |
1981 | 2074 | 4.778534 | AATTGGAGCATTGACTTGTCTG | 57.221 | 40.909 | 2.35 | 0.00 | 0.00 | 3.51 |
2169 | 2263 | 3.194861 | TCATATGGTCTGTTTAGTGCGC | 58.805 | 45.455 | 0.00 | 0.00 | 0.00 | 6.09 |
2183 | 2281 | 6.417635 | GTGCACGTCCAATTATTTTCATATGG | 59.582 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
2200 | 2298 | 5.861251 | TGGAAAATCATAATTTGTGCACGTC | 59.139 | 36.000 | 13.13 | 0.00 | 35.27 | 4.34 |
2205 | 2303 | 9.970395 | TCATCTATGGAAAATCATAATTTGTGC | 57.030 | 29.630 | 0.00 | 0.00 | 35.27 | 4.57 |
2219 | 2317 | 9.246670 | CAATGCCCTATAAATCATCTATGGAAA | 57.753 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
2239 | 2337 | 5.048364 | TGGACTGTTTATGTACAACAATGCC | 60.048 | 40.000 | 0.00 | 2.66 | 33.74 | 4.40 |
2241 | 2339 | 8.726068 | TGTATGGACTGTTTATGTACAACAATG | 58.274 | 33.333 | 0.00 | 0.00 | 33.74 | 2.82 |
2366 | 2464 | 0.318120 | TCGTCGGGGACAAACTTACC | 59.682 | 55.000 | 0.00 | 0.00 | 32.09 | 2.85 |
2372 | 2470 | 1.823169 | CTCCCTTCGTCGGGGACAAA | 61.823 | 60.000 | 5.25 | 0.00 | 46.99 | 2.83 |
2433 | 2531 | 2.842936 | CCTTCCTATCGGCGGGGT | 60.843 | 66.667 | 7.21 | 0.00 | 0.00 | 4.95 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.