>input_sequence_79690
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------------------------------------------ACAGCCACCTTCCTCACACAACCAGGACAAGCAAGCAG
CAGAACCAGTGTCAGATTTCCCGAGGCACAAGTTGAGCGCAAGATGGAGCACCAGGGGCGCGGCGCAGGCGAGAAGAAGG
GCGTCGTGGAGAGCATCACGGAGAAGCTCCCCGGTGGCCACGGTGATCACCAGCAGGCCACCGGTGGCACGTACGGTCAG
CAGGGACAC---GCCGGAGTTACCGG------------------------------------CGAGAACATCAAGGAGAA
GCTCCCCGGTGGCCACGGTGATCACCAGCAGACCACTGGAATGACCGGCTCGGAGACGCATGCCACCACGGCCACCACCG
ATGGCAACTACGGGAAGTCGGGACACACCGGCACTGACGGCACCGGTGAGAACAAGAGTATCATGGACAAGATCAAGGAC
AAGCTGCCTGGACAGCACTAAGCCCAACCGGTCTGCCCGCTAC----------------CTTTGCAGAAT-AATATA---
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----------------------------------------------------------------------------
>chr7D_1_TraesCS7D01G549900
GGCCCATTAGGCGCGTCTAGTTAGGGGCTTAGCCCAACTTATCATATTTTTTATTAGCAGCAAGGATTATATAAACAGAT
ATAAGGCAACCTTTTGGAATTAAGCAATAAGTCATAACTATTGCCCGACTCCCCTTAGGAGCCAGAACCCTAAACCCTAG
CGCCTCTCACCACCGCCGCCGCCTCCTCCCGCGCGATCACGGCGCCGACGCGCCGCCAGCCGCGCTCAACCTCTCACCAA
CCCACCTCTCATCCCTACAACCTACTGTTGAGGCCCGGTGACCCTAGCTCCTACCAGAATGGGACCAGGATTACTTATAC
TCAACGAATCTGTGAACATAGTGCTCAACTGAACTTGTCTTTGCTCCGGTTACAGCTCTCGGCCGAGTGCACCGATCTCG
GAGTGGATCGAGTAGCCAGCGATATTGCTGTGCTTTTTTGTTTAATGGAAGGTTTTCCAATTTCCTAAAAAAAAATTGGA
CCGTCCGCTGCTGGATAAATAGCAATTCAAGGTGCGTGCGAAACAATATTTAGAATTACAAGACTTTTAAA-CCAAAGCA
CAAAATCAAGAACATCAAGATTTTTTCTTTAGCATTCATGCAGTCTGTAGGAATTGTTCTAAGATCTGTGAAAAGTATCC
CGTGCATTAAAGAAAATATGGTTTGCACGGTGACGGGGACGGGCCCTGTGCCTTGGAGGGTGATATTTAAAATCCTTCAT
TATTTGCCACACGGACCACCACCTGTCAGCGAGACATGTTGTGGCAAATTATAAAAGTGAAAAAAAAAACAATTGGGCTC
CTCTTTATTGTCAGGTCGGCAGCCACTCATGCGAGCACACGTCGCGCCCTGCACTGC-ATGCCGCGGCGATTCGTCCATC
TAACCACCCCACTTTATGAGCTAGTCGGCAGTCACCTGCCCACCCACTCACAAGAGCACACGTGGTGCTTTCTCCACCCT
CCAACGGCCTATAAATAGCGCCTCGTGCTGCACTTGCTTTACACAGCCACCTTCCTCACACAACCAGGACAAGCAAGCAG
CAGAACCAGTGTCAGATTTCCCGAGGCACAAGTTGAGCGCAAGATGGAGCACCAGGGGCGCGGCGCAGGCGAGAAGAAGG
GCGTCGTGGAGAGCATCACGGAGAAGCTCCCCGGTGGCCACGGTGATCACCAGCAGGCCACCGGTGGCACGTACGGTCAG
CAGGGACAC---GCCGGAGTTACCGG------------------------------------CGAGAACATCAAGGAGAA
GCTCCCCGGTGGCCACGGTGATCACCAGCAGACCACTGGAATGACCGGCTCGGAGACGCATGCCACCACGGCCACCACCG
ATGGCAACTACGGGAAGTCGGGACACACCGGCACTGACGGCACCGGTGAGAACAAGAGTATCATGGACAAGATCAAGGAC
AAGCTGCCTGGACAGCACTAAGCCCAACCGGTCTGCCCGCTAC----------------CTTTGCAGAATAATATAATAA
GATGGCCAACTTCCACCGTGTATACATGAATCGAGTCTAGTTCAACTAGCTCACTTGGTCGTA-----------------
CATCTGGGTTTAAGCTTTCATGGACAACAGTGTGTCGAGGGTTTTTGTTTGTTTACAATTTGCATACTTTGATGTGGAAA
TTTCCT-TTGGTTCAACCGGTGCATGGTATGCTATGGCATCTAATATACATACTCCCTCTGTCCCAAAATAAGTGTCTCA
ACTTTGCACTAACTTTAGTACAAAATTGTAATAAAGTTAAGACACTTATTTTGGGACAGAGGAAGTATAAGCAAATGTTA
AGTTTGCAAGTCTGTTCTAACCGACTCATATGATGCATCACCCACTTCTTTTTACCTGGCAAGTAATTCTTGCAG--TTT
TTTTCTCACAAACTAATTACTTCCACGCGGAAAAAAAAGGCAAGCAAGGATGATCAACGACTGATGATGATGATGATGAG
---------------GAGGAAGGCAGGAAGCTGCAATCATTGGAACTGCGGTGAACAGTGATGGAGGACAGCACAGACAA
GTCAATGCTCCAATTAATGTACAC-AAACTTAAAAGGCTTAAAAATTCATAAGAAGTTAATTATTCATCCAAATAATAAT
ATTTTCTTGGATGCAGTCCGGAATGTCTCCATTCTATATGTCGCATCAATTCTTAATTTAAAATGTTTTTCATGCTTATA
TATCTTAAAAGAAATACTCGTGGCG----CACTAAACAGACCATATGAAAATAATTGGACGTGCACAAATTATGATTTTC
CATAGATGATTTATAGGGCATTGTTGTACATAAACAGTCCATACATAAGTTTATGTAAAGAAACTTTCACATAAAAATGA
GTTCATAAACTATGCATCCAAAAGTGTTTGTTTAATATTTCAGTTGGAAAATTAATGTTCAAAGGTAAGTTTGTCCCCGA
CGAAGGGAGCGCCGAGATGGAACTCCTCGTCCACAAGAAGTGGATGGAGCACCCCGCCGATAGGAAGGTGGCTCGC
>chr7A_347
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--------------------------AACTGTACTTGTCTTTGCTATGGTTACGCCTTTCGGGCGAGTGTACCGATCTCG
GAGTGGATCGAGTAGCCAGTGATATCGCGGCGCTTTTTTGTTTCACGGAAGGTTTTTCAAGTTCTTACAAAAAGTTTGGA
CCGTCCGCTGCTGG--AAATAGCAATTCAAGGTGCGTGTGAAACAATATTTAGAATTACAAAACTTTTAAACCCAAAGCA
CAAAATCAAGAACATCAAGATTTTT-CTTTAGCATTCATGCAGTCTGTAGGAATTGTTCTAAGATCTGTGAAAAATATCC
CGCGCATTAA--AAAATATGGTTTGCACGGTGACGGGGACGCGCCCTGTGCCTTGGAGGGTGATATTTTAAATCCTTTAT
TATTTGCCACACTGACCACCACCTGTCAGCGAGACATGTTGTGGCAAATTATAAAAGTGGAAAAAAAAACAAGTGGGCTC
CTCTTTATTGTCAGGTCGGCAGCCACTCATGCGAGCGCACGTCGCGCCCTGCACTGC-ATGCCGCGGCGACTCGTCCATC
CAACCACCCCACTTTATGAGCTAGTCGGCAGTCACCTGCCCATCCACTCACAAGAGCACACGTGGTGCTTTATCCACCCT
CCAACGGCCTATAAATAGCGCCTCGTGCTGCACTTGCTTTACACAGCCACCTTCCTCACACAACCAGGACAAGCAAACAA
CAGAACCAGTGTCAGATTTCCCTAGGGACAAGTTGAGGGCAAGATGGAGCACCAGGGGCACGGCGCAGGCGAGAAGAAGG
GCGTCATGGAAAGCATCACGGAGAAGCTCCCCCGTGGCCATGGTGATCACCAGCAGGCCACCGGTGGCACGTACGGGCAG
CAAGGACAC---ACCGGAGTTACCGGCACAGGCACCGGCACCGGCGAGAAGAAGGGCGTCGTCGAGAACATCAAGGAGAA
GCTTCCCGGTGGGCACGGTGACCACCAGCACACCACTGGAATGAGCGGCTCGAAGACGCATGCCACCACAGCCACCACCG
ATGGCAACTACGGGAAGTCGGGACACACCGGCACTGACAGCACCGGTGAGAACAAGAGCATGATGGACAAGATCAAGGAC
AAGCTGCCTGGACAGCACTAAGCCCAGCCGGTCTGCCCACGCCCGCGCCCGACCCGCTACTTTGCAGAAT-ATATAATAA
GATGGCCAACTTCCACCGTGTATACATGAATTTAAGCTTTCA--------------------TGGAGGAGCGCCCCAATT
CATCTGGGTTTAAGCTTTCATGGACAACAGTGTGTCGAGGGTTTTCGTTTGTTTACAATTTGCATACTTTGACATGGAAA
TTTCCTTTTGGTTCAACCGGTGCATGGTATGCTATGGCATCTAATATAAATATAAGCA----------------------
------------------------------------------------------------------------AAATGTTA
AGTTTGCAAGTCTGTTCTAACCGACTCATATGATGCATCACCCACTTCTTTTTACCTGGCAAGTAATTCTTGTAGTTTTT
TTTTCTCACAAACTAATTACTTCCACGCGAAAAAAAA--GCAAGCAAGGATGATCAACGACTGATGGTGATGATGATGAT
GATGATGATGATGATGAGGAAGGCAGGAAGCTGCAATCATTGGAACTGCGGTGAACAGTGGTGGAGGCAAGCAAAGACAA
GTCAATGCTCCAATTAATGTACAC-AAACTTAAAAGGCTTAAAAATTCATAAGAAGTTAATTATTCATCCAAATAATAAT
ATTTTCTTGGATGCAGTCCGGAATGTCTTCATTCTATATGTCGCATCAATTCTTAATTTAGAATGTTTTTCATGATTATA
TATCTTAAAAGAAATACTCGTGATG----CACTAAACAGATCATATGAAAATAATTGTACGTACACAAATTATGATATTC
CATAGATGATTTATAGAGTATTGTTGTACATAAACAGTCCATACATAAGTTTATGTAAAGAAACTTTCACATAAAAATGA
GTTCGTAAACTATGCATCCAAAAGTGTTTGTTTAATATTTCAGTTGAAAAATTAATGTTCAAAAGTAAGCTTGTCCCCGA
CGAAGGGAGCGCCGAGATGGAACTCCTCGTCCACAAGAAGTGGATGGAGCTCCCCGCCGATAAGAAGGTGG-----
>chr7B_814
GTT-----------------------------------------------------------------------------
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-----------------GGAAGCCAATCACGCGAGCACACGTCGCGCCTTGCACTGCAATGCCACGGCGATTCGTCCATC
TAACCACCCCACTTTATGAGCTAGTCGGCAGTCACCTGCCCATCCACTCACAAGAGCACACGTGGTGCTTTCTCCACCCT
CCAACGGCCTATAAATAGTGCCTCGTGATGCACTTGCTTTACACAGCCACCTTCCTCAC---------ACAACCAAACAG
CAGAACCAGTGTCAGATTTCCCGAGGGACAAGTTGAGCGCAAGATGGAGCACCAGGGGCGCGGCGCAGGCGAGAACAAGG
GCGTCGTGGAGAGCATCACGGAGAAGCTCCCCGGTGGCCACGGTGATCACCAGCAGACCACCGGTGGTACATACGGGCAG
CAGGGACACGGCGCCGGAGTTACCGGCACAGGCACCGGCACCAGCGAGAAGAAGGGCGTCATCGAGAACATCAAGGAGAA
GCTCCCCGGTGGCCACGGTGGCCCCCAGCACACCACTGGAATGACCGGCTCGGAGACGCATGCCACCACGGCCACCACCG
ATGGCAACTACGGGAAGTCGGGACACACCGGCACTGACGGCACCGGTGAGAACAAGAGCATCATGGACAAGATCAAGGAC
AAGCTGCCTGGACAGCACTAAGCCCAGCCGGCCGCCCCGCTAC----------------CTTTGCAGAAT-ATATAATAA
GATGGCCAACTTCCACCGTGTATACATTAACTGAGTCTAGTTTAACTAGCTCACTTGGTCGTTGGAGGAGCGCCCGAATT
CATCTGGGTTTAAGTTTTC---------------------------GTTTGTTTACAATTTGCCTACTTTGATGTGGAAA
TTTCCTCTTGGTTCAAACCGTGTATGGTATGCTGTGGTATCTA-------------------------------------
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--------------TAATATACAT--------------------------------------------------------
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>chr7B_1749
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---------------------------------------------------------------AGTATAAGCAAATGTTA
AGTTTGCAAGTCTGTTCTTATCGACTCATATCATGCATCGCCCTCTTCTTTTTACCTGGCAAGTAACTCTTGCAGTTTTT
TTTTCTCATATACTAATTACTTCCACGCAAAAAAAAA--GCAAGCAAAGATTATCAACGACTAATGTCC-----------
-ATGATGATGATGATGAGGA-----GGAAGCTGCAATCATTGGAACTTCGGTGAATAGGGGCGGAAGCAAGCAATGACAA
GTCAATGTTCCAATTAATGTACAAAAAACTTAAAAAGCTTAAAAATTCACAGGATGTCAATTATTCATCAAAATAACAAT
ATTTTCTAGGATGCACTCCGGAATGTCTCCATTCTATATGC--CATTAATTTTTACTTTAAAATGTTTTTCATGCTTATA
TATCTTAAATGAAATACTCGTGACACACACACTAAACAGATCATATGGAAATAATTGT----------------------
---------------------------------ACAGTCCATACATAAGTTTATGTAAAGAAACTCGCACATAAAAATGA
GTTCATAAACTGTGCACCCAAAAGTATTTGTTTAATATTTTGGTTGGAAAATTAAT------------------------
----------------------------------------------------------------------------
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------SS------SS--S----S------S----------
-------------------S-----S--S-S------------S-S----------S---S---S--S-----SS-----
--------------SS----------------------S----------------------S------------------
-------------------------S------------------------------------------------S-----
--S-------SS-----------------------------S--------------------------S--------S--
------------S----------------------------------------------S------------S-------
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------------------------------------------S-------------------------------------
----------------------------------------------------------------------------S---
--------------------------S-----------------------------------------------------
----------------------------------------------------------------------------S---
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---------------------S--------S-------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------S-------------------------------------------S---------
-------------------------------S----------S-------------------S-----------------
---------------------------------------------S----------------------------------
------------------------------------------------S---SSSS-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
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-----------------------------S-------SS---------------------------S------------S
------------------------------------------------------------S------SS----S------
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----------------------S-----------------S----------------S----S-------------S---
----------------S-S-------------------------------------------------------------
---------------------------------------------------------------S-----S----------
--------------------------------------------------S-----------S--------SSSSS
>forward_420
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GAGTGGATCGAGTAGCCAGC------------------------------------------------------------
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>reverse_2464
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---------------------------------------------------------------GGTAAGTTTGTCCCCGA
CGA-------------------------------------------------------------------------
