Multiple sequence alignment - TraesCS7D01G448600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G448600 chr7D 100.000 2720 0 0 1 2720 568367191 568369910 0.000000e+00 5024.0
1 TraesCS7D01G448600 chr7D 83.333 90 3 9 1214 1303 86731257 86731180 3.760000e-09 73.1
2 TraesCS7D01G448600 chr7B 89.861 2012 98 32 767 2717 623947831 623949797 0.000000e+00 2488.0
3 TraesCS7D01G448600 chr7B 87.850 107 10 2 161 267 623947369 623947472 3.680000e-24 122.0
4 TraesCS7D01G448600 chr7A 89.979 1417 77 30 884 2269 657021676 657023058 0.000000e+00 1770.0
5 TraesCS7D01G448600 chr7A 91.087 460 29 6 1988 2436 123426178 123426636 1.790000e-171 612.0
6 TraesCS7D01G448600 chr7A 98.429 191 3 0 2530 2720 657023056 657023246 1.210000e-88 337.0
7 TraesCS7D01G448600 chr7A 92.079 101 5 3 1876 1976 123425583 123425680 3.650000e-29 139.0
8 TraesCS7D01G448600 chr7A 100.000 36 0 0 2438 2473 123426661 123426696 1.750000e-07 67.6
9 TraesCS7D01G448600 chr6A 89.389 311 27 4 1876 2183 572388884 572389191 1.180000e-103 387.0
10 TraesCS7D01G448600 chr6A 82.392 301 31 8 2440 2720 8176595 8176297 2.710000e-60 243.0
11 TraesCS7D01G448600 chr6A 95.522 134 6 0 2303 2436 572389186 572389319 5.900000e-52 215.0
12 TraesCS7D01G448600 chr6A 100.000 36 0 0 2438 2473 572389344 572389379 1.750000e-07 67.6
13 TraesCS7D01G448600 chr3A 89.811 265 23 2 1876 2137 425749374 425749637 1.210000e-88 337.0
14 TraesCS7D01G448600 chr5A 89.057 265 23 4 1876 2137 677744645 677744384 9.390000e-85 324.0
15 TraesCS7D01G448600 chr5A 89.222 167 12 4 1876 2039 543630513 543630676 1.280000e-48 204.0
16 TraesCS7D01G448600 chr6D 77.778 594 46 30 2180 2720 7963774 7963214 1.230000e-73 287.0
17 TraesCS7D01G448600 chr6B 85.769 260 23 7 2180 2431 14360264 14360517 2.080000e-66 263.0
18 TraesCS7D01G448600 chr1B 91.473 129 11 0 529 657 522116481 522116609 7.740000e-41 178.0
19 TraesCS7D01G448600 chr1B 91.129 124 11 0 540 663 156585598 156585475 4.660000e-38 169.0
20 TraesCS7D01G448600 chr2D 92.437 119 9 0 539 657 607606680 607606562 1.300000e-38 171.0
21 TraesCS7D01G448600 chr2B 92.437 119 9 0 539 657 3198591 3198709 1.300000e-38 171.0
22 TraesCS7D01G448600 chr4B 91.525 118 10 0 539 656 143309964 143310081 2.170000e-36 163.0
23 TraesCS7D01G448600 chr4B 91.453 117 10 0 540 656 19007624 19007508 7.790000e-36 161.0
24 TraesCS7D01G448600 chr3B 91.453 117 10 0 540 656 238502560 238502676 7.790000e-36 161.0
25 TraesCS7D01G448600 chr3B 90.678 118 11 0 539 656 803527311 803527194 1.010000e-34 158.0
26 TraesCS7D01G448600 chr4D 90.083 121 12 0 540 660 392514708 392514828 1.010000e-34 158.0
27 TraesCS7D01G448600 chrUn 100.000 34 0 0 2330 2363 24973608 24973575 2.260000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G448600 chr7D 568367191 568369910 2719 False 5024.000000 5024 100.000000 1 2720 1 chr7D.!!$F1 2719
1 TraesCS7D01G448600 chr7B 623947369 623949797 2428 False 1305.000000 2488 88.855500 161 2717 2 chr7B.!!$F1 2556
2 TraesCS7D01G448600 chr7A 657021676 657023246 1570 False 1053.500000 1770 94.204000 884 2720 2 chr7A.!!$F2 1836
3 TraesCS7D01G448600 chr7A 123425583 123426696 1113 False 272.866667 612 94.388667 1876 2473 3 chr7A.!!$F1 597
4 TraesCS7D01G448600 chr6D 7963214 7963774 560 True 287.000000 287 77.778000 2180 2720 1 chr6D.!!$R1 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.035439 ACCACGAGTAAGGCCAATGG 60.035 55.0 5.01 3.88 0.00 3.16 F
130 131 0.036671 TGGTGTCGACGAGAGCTCTA 60.037 55.0 18.25 0.00 0.00 2.43 F
523 635 0.107017 ATGTGGATTCCAGGCTTCCG 60.107 55.0 5.39 0.00 32.34 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1309 1444 0.323908 AGAAGCCCGTAGACAGAGCT 60.324 55.000 0.00 0.0 34.64 4.09 R
1316 1451 2.359169 CCTGCCAGAAGCCCGTAGA 61.359 63.158 0.00 0.0 42.71 2.59 R
2368 3016 2.159198 GGCATGCTAGTTTGGTCATTGG 60.159 50.000 18.92 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.334691 TCTCCAGCAGTACAAAAATCCG 58.665 45.455 0.00 0.00 0.00 4.18
23 24 3.074412 CTCCAGCAGTACAAAAATCCGT 58.926 45.455 0.00 0.00 0.00 4.69
24 25 2.811431 TCCAGCAGTACAAAAATCCGTG 59.189 45.455 0.00 0.00 0.00 4.94
25 26 2.584791 CAGCAGTACAAAAATCCGTGC 58.415 47.619 0.00 0.00 0.00 5.34
26 27 2.031245 CAGCAGTACAAAAATCCGTGCA 60.031 45.455 0.00 0.00 31.75 4.57
27 28 2.819608 AGCAGTACAAAAATCCGTGCAT 59.180 40.909 0.00 0.00 31.75 3.96
28 29 2.916716 GCAGTACAAAAATCCGTGCATG 59.083 45.455 0.00 0.00 0.00 4.06
29 30 3.365868 GCAGTACAAAAATCCGTGCATGA 60.366 43.478 7.72 0.00 0.00 3.07
30 31 4.793071 CAGTACAAAAATCCGTGCATGAA 58.207 39.130 7.72 0.00 0.00 2.57
31 32 4.616802 CAGTACAAAAATCCGTGCATGAAC 59.383 41.667 7.72 0.00 0.00 3.18
32 33 4.518970 AGTACAAAAATCCGTGCATGAACT 59.481 37.500 7.72 0.00 0.00 3.01
33 34 3.641648 ACAAAAATCCGTGCATGAACTG 58.358 40.909 7.72 0.00 0.00 3.16
34 35 3.068024 ACAAAAATCCGTGCATGAACTGT 59.932 39.130 7.72 0.00 0.00 3.55
35 36 2.995466 AAATCCGTGCATGAACTGTG 57.005 45.000 7.72 0.00 0.00 3.66
36 37 2.183478 AATCCGTGCATGAACTGTGA 57.817 45.000 7.72 0.00 0.00 3.58
37 38 2.183478 ATCCGTGCATGAACTGTGAA 57.817 45.000 7.72 0.00 0.00 3.18
38 39 1.225855 TCCGTGCATGAACTGTGAAC 58.774 50.000 7.72 0.00 0.00 3.18
39 40 1.202639 TCCGTGCATGAACTGTGAACT 60.203 47.619 7.72 0.00 0.00 3.01
40 41 1.069703 CCGTGCATGAACTGTGAACTG 60.070 52.381 7.72 0.00 0.00 3.16
41 42 1.069703 CGTGCATGAACTGTGAACTGG 60.070 52.381 0.00 0.00 0.00 4.00
42 43 2.221169 GTGCATGAACTGTGAACTGGA 58.779 47.619 0.00 0.00 0.00 3.86
43 44 2.031682 GTGCATGAACTGTGAACTGGAC 60.032 50.000 0.00 0.00 0.00 4.02
44 45 1.537202 GCATGAACTGTGAACTGGACC 59.463 52.381 0.00 0.00 0.00 4.46
45 46 2.849942 CATGAACTGTGAACTGGACCA 58.150 47.619 0.00 0.00 0.00 4.02
46 47 2.325583 TGAACTGTGAACTGGACCAC 57.674 50.000 0.00 0.00 0.00 4.16
47 48 1.217882 GAACTGTGAACTGGACCACG 58.782 55.000 0.00 0.00 36.15 4.94
48 49 0.828022 AACTGTGAACTGGACCACGA 59.172 50.000 0.00 0.00 36.15 4.35
49 50 0.389391 ACTGTGAACTGGACCACGAG 59.611 55.000 0.00 0.00 36.15 4.18
50 51 0.389391 CTGTGAACTGGACCACGAGT 59.611 55.000 0.00 0.00 36.68 4.18
51 52 1.611977 CTGTGAACTGGACCACGAGTA 59.388 52.381 0.00 0.00 34.16 2.59
52 53 2.033372 TGTGAACTGGACCACGAGTAA 58.967 47.619 0.00 0.00 34.16 2.24
53 54 2.035449 TGTGAACTGGACCACGAGTAAG 59.965 50.000 0.00 0.00 34.16 2.34
54 55 1.616865 TGAACTGGACCACGAGTAAGG 59.383 52.381 0.00 0.00 34.16 2.69
55 56 0.320697 AACTGGACCACGAGTAAGGC 59.679 55.000 0.00 0.00 34.16 4.35
56 57 1.218316 CTGGACCACGAGTAAGGCC 59.782 63.158 0.00 0.00 0.00 5.19
57 58 1.534476 TGGACCACGAGTAAGGCCA 60.534 57.895 5.01 0.00 0.00 5.36
58 59 1.122632 TGGACCACGAGTAAGGCCAA 61.123 55.000 5.01 0.00 31.27 4.52
59 60 0.252197 GGACCACGAGTAAGGCCAAT 59.748 55.000 5.01 0.00 0.00 3.16
60 61 1.369625 GACCACGAGTAAGGCCAATG 58.630 55.000 5.01 0.00 0.00 2.82
61 62 0.035439 ACCACGAGTAAGGCCAATGG 60.035 55.000 5.01 3.88 0.00 3.16
62 63 0.251916 CCACGAGTAAGGCCAATGGA 59.748 55.000 5.01 0.00 0.00 3.41
63 64 1.134098 CCACGAGTAAGGCCAATGGAT 60.134 52.381 5.01 0.00 0.00 3.41
64 65 2.643551 CACGAGTAAGGCCAATGGATT 58.356 47.619 5.01 0.00 0.00 3.01
65 66 3.016736 CACGAGTAAGGCCAATGGATTT 58.983 45.455 5.01 0.00 0.00 2.17
66 67 3.065371 CACGAGTAAGGCCAATGGATTTC 59.935 47.826 5.01 0.00 0.00 2.17
67 68 3.054361 ACGAGTAAGGCCAATGGATTTCT 60.054 43.478 5.01 0.00 0.00 2.52
68 69 3.313526 CGAGTAAGGCCAATGGATTTCTG 59.686 47.826 5.01 0.00 0.00 3.02
69 70 4.526970 GAGTAAGGCCAATGGATTTCTGA 58.473 43.478 5.01 0.00 0.00 3.27
70 71 5.134725 AGTAAGGCCAATGGATTTCTGAT 57.865 39.130 5.01 0.00 0.00 2.90
71 72 5.522641 AGTAAGGCCAATGGATTTCTGATT 58.477 37.500 5.01 0.00 0.00 2.57
72 73 6.672593 AGTAAGGCCAATGGATTTCTGATTA 58.327 36.000 5.01 0.00 0.00 1.75
73 74 6.774656 AGTAAGGCCAATGGATTTCTGATTAG 59.225 38.462 5.01 0.00 0.00 1.73
74 75 5.393068 AGGCCAATGGATTTCTGATTAGA 57.607 39.130 5.01 0.00 0.00 2.10
75 76 5.383476 AGGCCAATGGATTTCTGATTAGAG 58.617 41.667 5.01 0.00 33.70 2.43
76 77 5.133322 AGGCCAATGGATTTCTGATTAGAGA 59.867 40.000 5.01 0.00 33.70 3.10
77 78 5.472820 GGCCAATGGATTTCTGATTAGAGAG 59.527 44.000 2.05 0.00 33.70 3.20
78 79 6.060788 GCCAATGGATTTCTGATTAGAGAGT 58.939 40.000 2.05 0.00 33.70 3.24
79 80 6.017275 GCCAATGGATTTCTGATTAGAGAGTG 60.017 42.308 2.05 0.00 33.70 3.51
80 81 6.017275 CCAATGGATTTCTGATTAGAGAGTGC 60.017 42.308 0.00 0.00 33.70 4.40
81 82 5.946942 TGGATTTCTGATTAGAGAGTGCT 57.053 39.130 0.00 0.00 33.70 4.40
82 83 5.911752 TGGATTTCTGATTAGAGAGTGCTC 58.088 41.667 0.00 0.00 41.62 4.26
83 84 4.981674 GGATTTCTGATTAGAGAGTGCTCG 59.018 45.833 0.00 0.00 45.98 5.03
84 85 3.428746 TTCTGATTAGAGAGTGCTCGC 57.571 47.619 0.00 0.00 45.98 5.03
85 86 2.649190 TCTGATTAGAGAGTGCTCGCT 58.351 47.619 10.12 10.12 45.98 4.93
86 87 2.357323 TCTGATTAGAGAGTGCTCGCTG 59.643 50.000 14.23 0.00 45.98 5.18
87 88 2.357323 CTGATTAGAGAGTGCTCGCTGA 59.643 50.000 14.23 7.64 45.98 4.26
88 89 2.954989 TGATTAGAGAGTGCTCGCTGAT 59.045 45.455 14.23 11.69 45.98 2.90
89 90 2.859526 TTAGAGAGTGCTCGCTGATG 57.140 50.000 14.23 0.00 45.98 3.07
90 91 0.383590 TAGAGAGTGCTCGCTGATGC 59.616 55.000 14.23 0.00 45.98 3.91
91 92 1.141449 GAGAGTGCTCGCTGATGCT 59.859 57.895 0.00 0.00 36.97 3.79
92 93 0.383590 GAGAGTGCTCGCTGATGCTA 59.616 55.000 0.00 0.00 36.97 3.49
93 94 0.102120 AGAGTGCTCGCTGATGCTAC 59.898 55.000 0.00 0.00 36.97 3.58
94 95 0.179127 GAGTGCTCGCTGATGCTACA 60.179 55.000 0.00 0.00 36.97 2.74
95 96 0.179116 AGTGCTCGCTGATGCTACAG 60.179 55.000 6.40 6.40 40.43 2.74
102 103 2.459245 CTGATGCTACAGCGTTGCA 58.541 52.632 16.42 16.42 46.37 4.08
103 104 0.798159 CTGATGCTACAGCGTTGCAA 59.202 50.000 17.52 0.00 45.61 4.08
104 105 0.516877 TGATGCTACAGCGTTGCAAC 59.483 50.000 19.89 19.89 45.61 4.17
105 106 0.179189 GATGCTACAGCGTTGCAACC 60.179 55.000 23.42 15.73 45.61 3.77
106 107 0.888736 ATGCTACAGCGTTGCAACCA 60.889 50.000 23.42 13.69 45.61 3.67
107 108 1.098129 TGCTACAGCGTTGCAACCAA 61.098 50.000 23.42 4.16 40.72 3.67
108 109 0.660300 GCTACAGCGTTGCAACCAAC 60.660 55.000 23.42 13.20 46.15 3.77
109 110 0.040425 CTACAGCGTTGCAACCAACC 60.040 55.000 23.42 9.64 46.76 3.77
110 111 0.748367 TACAGCGTTGCAACCAACCA 60.748 50.000 23.42 3.97 46.76 3.67
111 112 1.363443 CAGCGTTGCAACCAACCAT 59.637 52.632 23.42 0.83 46.76 3.55
112 113 0.940519 CAGCGTTGCAACCAACCATG 60.941 55.000 23.42 8.86 46.76 3.66
121 122 3.561429 CCAACCATGGTGTCGACG 58.439 61.111 20.60 2.99 42.18 5.12
122 123 1.005512 CCAACCATGGTGTCGACGA 60.006 57.895 20.60 0.00 42.18 4.20
123 124 1.014044 CCAACCATGGTGTCGACGAG 61.014 60.000 20.60 1.28 42.18 4.18
124 125 0.038618 CAACCATGGTGTCGACGAGA 60.039 55.000 20.60 0.00 0.00 4.04
125 126 0.243907 AACCATGGTGTCGACGAGAG 59.756 55.000 20.60 0.00 0.00 3.20
126 127 1.517257 CCATGGTGTCGACGAGAGC 60.517 63.158 16.41 16.41 0.00 4.09
127 128 1.508545 CATGGTGTCGACGAGAGCT 59.491 57.895 22.39 7.80 0.00 4.09
128 129 0.524392 CATGGTGTCGACGAGAGCTC 60.524 60.000 22.39 5.27 0.00 4.09
129 130 0.678366 ATGGTGTCGACGAGAGCTCT 60.678 55.000 18.28 18.28 0.00 4.09
130 131 0.036671 TGGTGTCGACGAGAGCTCTA 60.037 55.000 18.25 0.00 0.00 2.43
131 132 1.085091 GGTGTCGACGAGAGCTCTAA 58.915 55.000 18.25 0.00 0.00 2.10
132 133 1.671845 GGTGTCGACGAGAGCTCTAAT 59.328 52.381 18.25 7.68 0.00 1.73
133 134 2.539953 GGTGTCGACGAGAGCTCTAATG 60.540 54.545 18.25 12.24 0.00 1.90
134 135 2.096174 GTGTCGACGAGAGCTCTAATGT 59.904 50.000 18.25 15.58 0.00 2.71
135 136 2.747989 TGTCGACGAGAGCTCTAATGTT 59.252 45.455 18.25 0.00 0.00 2.71
136 137 3.190744 TGTCGACGAGAGCTCTAATGTTT 59.809 43.478 18.25 0.00 0.00 2.83
137 138 4.393990 TGTCGACGAGAGCTCTAATGTTTA 59.606 41.667 18.25 5.46 0.00 2.01
138 139 5.066117 TGTCGACGAGAGCTCTAATGTTTAT 59.934 40.000 18.25 0.00 0.00 1.40
139 140 5.622041 GTCGACGAGAGCTCTAATGTTTATC 59.378 44.000 18.25 0.00 0.00 1.75
140 141 4.609295 CGACGAGAGCTCTAATGTTTATCG 59.391 45.833 18.25 14.95 0.00 2.92
141 142 4.291783 ACGAGAGCTCTAATGTTTATCGC 58.708 43.478 18.25 0.00 0.00 4.58
142 143 3.670991 CGAGAGCTCTAATGTTTATCGCC 59.329 47.826 18.25 0.00 0.00 5.54
143 144 3.643763 AGAGCTCTAATGTTTATCGCCG 58.356 45.455 16.50 0.00 0.00 6.46
144 145 3.068307 AGAGCTCTAATGTTTATCGCCGT 59.932 43.478 16.50 0.00 0.00 5.68
145 146 3.793559 AGCTCTAATGTTTATCGCCGTT 58.206 40.909 0.00 0.00 0.00 4.44
146 147 4.189231 AGCTCTAATGTTTATCGCCGTTT 58.811 39.130 0.00 0.00 0.00 3.60
147 148 4.034048 AGCTCTAATGTTTATCGCCGTTTG 59.966 41.667 0.00 0.00 0.00 2.93
148 149 4.033587 GCTCTAATGTTTATCGCCGTTTGA 59.966 41.667 0.00 0.00 0.00 2.69
149 150 5.459110 TCTAATGTTTATCGCCGTTTGAC 57.541 39.130 0.00 0.00 0.00 3.18
150 151 3.481112 AATGTTTATCGCCGTTTGACC 57.519 42.857 0.00 0.00 0.00 4.02
151 152 1.880271 TGTTTATCGCCGTTTGACCA 58.120 45.000 0.00 0.00 0.00 4.02
152 153 1.532007 TGTTTATCGCCGTTTGACCAC 59.468 47.619 0.00 0.00 0.00 4.16
153 154 1.135888 GTTTATCGCCGTTTGACCACC 60.136 52.381 0.00 0.00 0.00 4.61
154 155 1.015085 TTATCGCCGTTTGACCACCG 61.015 55.000 0.00 0.00 0.00 4.94
155 156 2.839043 TATCGCCGTTTGACCACCGG 62.839 60.000 0.00 0.00 44.46 5.28
156 157 4.973055 CGCCGTTTGACCACCGGA 62.973 66.667 9.46 0.00 44.41 5.14
157 158 2.592287 GCCGTTTGACCACCGGAA 60.592 61.111 9.46 0.00 44.41 4.30
158 159 2.900167 GCCGTTTGACCACCGGAAC 61.900 63.158 9.46 0.00 44.41 3.62
159 160 1.524165 CCGTTTGACCACCGGAACA 60.524 57.895 9.46 0.00 44.41 3.18
168 169 1.586154 CCACCGGAACATGAAGGCAC 61.586 60.000 9.46 0.00 0.00 5.01
198 199 4.347453 CTTTGCTGGTGCCACCGC 62.347 66.667 19.34 19.34 42.58 5.68
199 200 4.892965 TTTGCTGGTGCCACCGCT 62.893 61.111 24.01 0.00 42.58 5.52
203 204 4.415150 CTGGTGCCACCGCTGGAT 62.415 66.667 9.78 0.00 42.58 3.41
212 213 1.269988 CCACCGCTGGATATGTCTCAG 60.270 57.143 0.00 4.34 40.55 3.35
225 226 3.194005 TGTCTCAGAAACTTTTCGCCT 57.806 42.857 0.00 0.00 41.92 5.52
227 228 2.872858 GTCTCAGAAACTTTTCGCCTGT 59.127 45.455 0.00 0.00 41.92 4.00
230 231 1.001378 CAGAAACTTTTCGCCTGTGGG 60.001 52.381 0.00 0.00 41.92 4.61
241 242 0.741915 GCCTGTGGGTTTGTTTTCGA 59.258 50.000 0.00 0.00 34.45 3.71
246 247 2.685897 TGTGGGTTTGTTTTCGAGGAAG 59.314 45.455 0.00 0.00 0.00 3.46
256 257 4.938832 TGTTTTCGAGGAAGTGTTTGAAGA 59.061 37.500 0.00 0.00 0.00 2.87
261 262 4.065088 CGAGGAAGTGTTTGAAGATTGGA 58.935 43.478 0.00 0.00 0.00 3.53
269 276 5.776716 AGTGTTTGAAGATTGGATGTTGGAT 59.223 36.000 0.00 0.00 0.00 3.41
273 280 6.773976 TTGAAGATTGGATGTTGGATAACC 57.226 37.500 0.00 0.00 35.92 2.85
279 286 7.815383 AGATTGGATGTTGGATAACCATCTTA 58.185 34.615 0.00 0.00 46.34 2.10
282 289 8.918202 TTGGATGTTGGATAACCATCTTATAC 57.082 34.615 0.00 0.00 46.34 1.47
284 291 8.375506 TGGATGTTGGATAACCATCTTATACTC 58.624 37.037 0.00 0.00 46.34 2.59
285 292 8.598041 GGATGTTGGATAACCATCTTATACTCT 58.402 37.037 0.00 0.00 46.34 3.24
312 319 1.988293 TTTTTGCGGGTGATCTTCCA 58.012 45.000 9.12 0.00 0.00 3.53
313 320 1.243902 TTTTGCGGGTGATCTTCCAC 58.756 50.000 9.12 0.00 36.37 4.02
314 321 0.400213 TTTGCGGGTGATCTTCCACT 59.600 50.000 9.12 0.00 37.24 4.00
315 322 1.271856 TTGCGGGTGATCTTCCACTA 58.728 50.000 9.12 0.00 37.24 2.74
321 328 4.622220 GCGGGTGATCTTCCACTAAAGTTA 60.622 45.833 9.12 0.00 37.24 2.24
323 330 6.113411 CGGGTGATCTTCCACTAAAGTTATT 58.887 40.000 9.12 0.00 37.24 1.40
325 332 6.183360 GGGTGATCTTCCACTAAAGTTATTGC 60.183 42.308 9.12 0.00 37.24 3.56
326 333 6.456988 GGTGATCTTCCACTAAAGTTATTGCG 60.457 42.308 0.00 0.00 37.24 4.85
340 347 6.673154 AGTTATTGCGGGTGTAAATAGTTC 57.327 37.500 0.00 0.00 0.00 3.01
348 355 5.750067 GCGGGTGTAAATAGTTCGAAGATTA 59.250 40.000 0.00 0.00 35.04 1.75
363 371 5.174398 TCGAAGATTATCAACGCGGAATAAC 59.826 40.000 12.47 6.49 0.00 1.89
374 382 4.456914 ACGCGGAATAACTTTTTGTAACG 58.543 39.130 12.47 0.00 0.00 3.18
377 385 4.552276 GCGGAATAACTTTTTGTAACGAGC 59.448 41.667 0.00 0.00 0.00 5.03
380 388 6.302313 CGGAATAACTTTTTGTAACGAGCTTG 59.698 38.462 0.00 0.00 0.00 4.01
383 391 5.554822 AACTTTTTGTAACGAGCTTGTGA 57.445 34.783 7.56 0.00 0.00 3.58
401 409 8.184192 AGCTTGTGAAATAAAATGGTTATCTCG 58.816 33.333 0.00 0.00 0.00 4.04
413 421 8.862325 AAATGGTTATCTCGATAATAATGCCA 57.138 30.769 2.98 5.77 35.90 4.92
414 422 8.498054 AATGGTTATCTCGATAATAATGCCAG 57.502 34.615 2.98 0.00 35.90 4.85
416 424 8.129496 TGGTTATCTCGATAATAATGCCAGTA 57.871 34.615 2.98 0.00 35.90 2.74
418 426 9.088512 GGTTATCTCGATAATAATGCCAGTAAG 57.911 37.037 2.98 0.00 35.90 2.34
421 429 5.046591 TCTCGATAATAATGCCAGTAAGGGG 60.047 44.000 0.00 0.00 38.09 4.79
422 430 4.841813 TCGATAATAATGCCAGTAAGGGGA 59.158 41.667 0.00 0.00 38.09 4.81
426 434 7.176690 CGATAATAATGCCAGTAAGGGGATTTT 59.823 37.037 4.29 2.83 45.43 1.82
427 435 8.797436 ATAATAATGCCAGTAAGGGGATTTTT 57.203 30.769 4.29 5.95 45.43 1.94
429 437 3.825908 TGCCAGTAAGGGGATTTTTCT 57.174 42.857 0.00 0.00 38.09 2.52
439 534 2.092968 GGGGATTTTTCTTTCCATGGCC 60.093 50.000 6.96 0.00 33.43 5.36
449 544 1.866483 TTCCATGGCCATGCACTCCT 61.866 55.000 36.08 2.21 37.49 3.69
453 548 1.679680 CATGGCCATGCACTCCTAAAG 59.320 52.381 31.95 4.78 31.39 1.85
455 550 1.718757 GGCCATGCACTCCTAAAGCG 61.719 60.000 0.00 0.00 0.00 4.68
458 553 2.806745 GCCATGCACTCCTAAAGCGATA 60.807 50.000 0.00 0.00 0.00 2.92
471 566 2.665649 AGCGATATCACGTTGGTTGA 57.334 45.000 3.12 0.00 35.59 3.18
478 573 5.573282 CGATATCACGTTGGTTGATATCCTC 59.427 44.000 19.40 5.32 43.63 3.71
479 574 3.159353 TCACGTTGGTTGATATCCTCG 57.841 47.619 0.00 0.00 0.00 4.63
482 577 3.551890 CACGTTGGTTGATATCCTCGAAG 59.448 47.826 0.00 0.00 0.00 3.79
483 578 2.540101 CGTTGGTTGATATCCTCGAAGC 59.460 50.000 0.00 0.00 0.00 3.86
484 579 2.872858 GTTGGTTGATATCCTCGAAGCC 59.127 50.000 0.00 0.00 0.00 4.35
485 580 2.398588 TGGTTGATATCCTCGAAGCCT 58.601 47.619 0.00 0.00 0.00 4.58
496 608 4.504858 TCCTCGAAGCCTTTAAAGATGAC 58.495 43.478 16.98 3.44 0.00 3.06
520 632 1.679944 CGTCATGTGGATTCCAGGCTT 60.680 52.381 5.39 0.00 32.34 4.35
521 633 2.019984 GTCATGTGGATTCCAGGCTTC 58.980 52.381 5.39 0.00 32.34 3.86
522 634 1.064463 TCATGTGGATTCCAGGCTTCC 60.064 52.381 5.39 0.00 32.34 3.46
523 635 0.107017 ATGTGGATTCCAGGCTTCCG 60.107 55.000 5.39 0.00 32.34 4.30
524 636 2.115291 GTGGATTCCAGGCTTCCGC 61.115 63.158 5.39 1.04 32.34 5.54
525 637 2.300967 TGGATTCCAGGCTTCCGCT 61.301 57.895 0.00 0.00 36.09 5.52
526 638 1.821332 GGATTCCAGGCTTCCGCTG 60.821 63.158 0.00 0.00 36.09 5.18
527 639 2.439156 ATTCCAGGCTTCCGCTGC 60.439 61.111 0.00 0.00 36.09 5.25
535 647 2.606275 GCTTCCGCTGCCACTATAC 58.394 57.895 0.00 0.00 0.00 1.47
538 650 2.205074 CTTCCGCTGCCACTATACAAG 58.795 52.381 0.00 0.00 0.00 3.16
539 651 1.191535 TCCGCTGCCACTATACAAGT 58.808 50.000 0.00 0.00 39.81 3.16
541 653 2.100252 TCCGCTGCCACTATACAAGTAC 59.900 50.000 0.00 0.00 35.76 2.73
542 654 2.100916 CCGCTGCCACTATACAAGTACT 59.899 50.000 0.00 0.00 35.76 2.73
543 655 3.372954 CGCTGCCACTATACAAGTACTC 58.627 50.000 0.00 0.00 35.76 2.59
544 656 3.718815 GCTGCCACTATACAAGTACTCC 58.281 50.000 0.00 0.00 35.76 3.85
545 657 3.492829 GCTGCCACTATACAAGTACTCCC 60.493 52.174 0.00 0.00 35.76 4.30
547 659 3.958798 TGCCACTATACAAGTACTCCCTC 59.041 47.826 0.00 0.00 35.76 4.30
548 660 3.321396 GCCACTATACAAGTACTCCCTCC 59.679 52.174 0.00 0.00 35.76 4.30
551 663 5.071370 CACTATACAAGTACTCCCTCCGAT 58.929 45.833 0.00 0.00 35.76 4.18
552 664 5.181622 CACTATACAAGTACTCCCTCCGATC 59.818 48.000 0.00 0.00 35.76 3.69
553 665 1.777941 ACAAGTACTCCCTCCGATCC 58.222 55.000 0.00 0.00 0.00 3.36
554 666 0.669077 CAAGTACTCCCTCCGATCCG 59.331 60.000 0.00 0.00 0.00 4.18
556 668 0.549950 AGTACTCCCTCCGATCCGAA 59.450 55.000 0.00 0.00 0.00 4.30
557 669 1.145325 AGTACTCCCTCCGATCCGAAT 59.855 52.381 0.00 0.00 0.00 3.34
558 670 1.962100 GTACTCCCTCCGATCCGAATT 59.038 52.381 0.00 0.00 0.00 2.17
559 671 2.376695 ACTCCCTCCGATCCGAATTA 57.623 50.000 0.00 0.00 0.00 1.40
560 672 1.962100 ACTCCCTCCGATCCGAATTAC 59.038 52.381 0.00 0.00 0.00 1.89
561 673 2.240279 CTCCCTCCGATCCGAATTACT 58.760 52.381 0.00 0.00 0.00 2.24
562 674 2.628657 CTCCCTCCGATCCGAATTACTT 59.371 50.000 0.00 0.00 0.00 2.24
563 675 2.364324 TCCCTCCGATCCGAATTACTTG 59.636 50.000 0.00 0.00 0.00 3.16
564 676 2.102588 CCCTCCGATCCGAATTACTTGT 59.897 50.000 0.00 0.00 0.00 3.16
565 677 3.381949 CCTCCGATCCGAATTACTTGTC 58.618 50.000 0.00 0.00 0.00 3.18
566 678 3.181479 CCTCCGATCCGAATTACTTGTCA 60.181 47.826 0.00 0.00 0.00 3.58
567 679 4.430007 CTCCGATCCGAATTACTTGTCAA 58.570 43.478 0.00 0.00 0.00 3.18
568 680 4.823157 TCCGATCCGAATTACTTGTCAAA 58.177 39.130 0.00 0.00 0.00 2.69
569 681 5.239351 TCCGATCCGAATTACTTGTCAAAA 58.761 37.500 0.00 0.00 0.00 2.44
570 682 5.701750 TCCGATCCGAATTACTTGTCAAAAA 59.298 36.000 0.00 0.00 0.00 1.94
635 747 9.725019 TTAGATACATTCATTTCTGTGACAAGT 57.275 29.630 0.00 0.00 0.00 3.16
637 749 9.725019 AGATACATTCATTTCTGTGACAAGTAA 57.275 29.630 0.00 0.00 0.00 2.24
641 753 9.683069 ACATTCATTTCTGTGACAAGTAATTTC 57.317 29.630 0.00 0.00 0.00 2.17
642 754 8.843733 CATTCATTTCTGTGACAAGTAATTTCG 58.156 33.333 0.00 0.00 0.00 3.46
643 755 7.722795 TCATTTCTGTGACAAGTAATTTCGA 57.277 32.000 0.00 0.00 0.00 3.71
644 756 8.148807 TCATTTCTGTGACAAGTAATTTCGAA 57.851 30.769 0.00 0.00 0.00 3.71
645 757 8.067784 TCATTTCTGTGACAAGTAATTTCGAAC 58.932 33.333 0.00 0.00 0.00 3.95
646 758 5.570262 TCTGTGACAAGTAATTTCGAACG 57.430 39.130 0.00 0.00 0.00 3.95
647 759 4.446385 TCTGTGACAAGTAATTTCGAACGG 59.554 41.667 0.00 0.00 0.00 4.44
648 760 4.370049 TGTGACAAGTAATTTCGAACGGA 58.630 39.130 0.00 0.00 0.00 4.69
649 761 4.446385 TGTGACAAGTAATTTCGAACGGAG 59.554 41.667 0.00 0.00 0.00 4.63
650 762 3.991773 TGACAAGTAATTTCGAACGGAGG 59.008 43.478 0.00 0.00 0.00 4.30
651 763 3.332034 ACAAGTAATTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
652 764 3.007182 ACAAGTAATTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
653 765 3.521947 AGTAATTTCGAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
654 766 2.830321 AGTAATTTCGAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
655 767 4.019174 AGTAATTTCGAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
656 768 2.955477 ATTTCGAACGGAGGGAGTAC 57.045 50.000 0.00 0.00 0.00 2.73
657 769 1.619654 TTTCGAACGGAGGGAGTACA 58.380 50.000 0.00 0.00 0.00 2.90
658 770 1.619654 TTCGAACGGAGGGAGTACAA 58.380 50.000 0.00 0.00 0.00 2.41
659 771 1.171308 TCGAACGGAGGGAGTACAAG 58.829 55.000 0.00 0.00 0.00 3.16
660 772 1.171308 CGAACGGAGGGAGTACAAGA 58.829 55.000 0.00 0.00 0.00 3.02
661 773 1.135460 CGAACGGAGGGAGTACAAGAC 60.135 57.143 0.00 0.00 0.00 3.01
662 774 1.891150 GAACGGAGGGAGTACAAGACA 59.109 52.381 0.00 0.00 0.00 3.41
663 775 1.546961 ACGGAGGGAGTACAAGACAG 58.453 55.000 0.00 0.00 0.00 3.51
664 776 1.075050 ACGGAGGGAGTACAAGACAGA 59.925 52.381 0.00 0.00 0.00 3.41
665 777 2.291670 ACGGAGGGAGTACAAGACAGAT 60.292 50.000 0.00 0.00 0.00 2.90
666 778 3.053842 ACGGAGGGAGTACAAGACAGATA 60.054 47.826 0.00 0.00 0.00 1.98
667 779 4.145807 CGGAGGGAGTACAAGACAGATAT 58.854 47.826 0.00 0.00 0.00 1.63
668 780 4.022762 CGGAGGGAGTACAAGACAGATATG 60.023 50.000 0.00 0.00 0.00 1.78
669 781 4.896482 GGAGGGAGTACAAGACAGATATGT 59.104 45.833 0.00 0.00 0.00 2.29
670 782 6.069331 GGAGGGAGTACAAGACAGATATGTA 58.931 44.000 0.00 0.00 0.00 2.29
671 783 6.722129 GGAGGGAGTACAAGACAGATATGTAT 59.278 42.308 0.00 0.00 32.65 2.29
672 784 7.309499 GGAGGGAGTACAAGACAGATATGTATG 60.309 44.444 0.00 0.00 32.65 2.39
673 785 6.495181 AGGGAGTACAAGACAGATATGTATGG 59.505 42.308 9.69 0.00 32.65 2.74
674 786 6.267928 GGGAGTACAAGACAGATATGTATGGT 59.732 42.308 0.16 0.16 32.65 3.55
675 787 7.371936 GGAGTACAAGACAGATATGTATGGTC 58.628 42.308 0.00 0.00 32.65 4.02
676 788 7.231722 GGAGTACAAGACAGATATGTATGGTCT 59.768 40.741 0.00 0.00 40.33 3.85
677 789 8.172352 AGTACAAGACAGATATGTATGGTCTC 57.828 38.462 0.00 0.00 37.82 3.36
678 790 8.001875 AGTACAAGACAGATATGTATGGTCTCT 58.998 37.037 0.00 0.00 37.82 3.10
679 791 7.283625 ACAAGACAGATATGTATGGTCTCTC 57.716 40.000 9.69 0.00 37.82 3.20
680 792 7.066142 ACAAGACAGATATGTATGGTCTCTCT 58.934 38.462 9.69 0.00 37.82 3.10
681 793 7.230510 ACAAGACAGATATGTATGGTCTCTCTC 59.769 40.741 9.69 0.00 37.82 3.20
682 794 7.090319 AGACAGATATGTATGGTCTCTCTCT 57.910 40.000 0.00 0.00 33.84 3.10
683 795 6.942005 AGACAGATATGTATGGTCTCTCTCTG 59.058 42.308 0.00 0.00 33.84 3.35
684 796 5.476599 ACAGATATGTATGGTCTCTCTCTGC 59.523 44.000 0.00 0.00 32.76 4.26
685 797 5.476254 CAGATATGTATGGTCTCTCTCTGCA 59.524 44.000 0.00 0.00 0.00 4.41
686 798 6.153170 CAGATATGTATGGTCTCTCTCTGCAT 59.847 42.308 0.00 0.00 0.00 3.96
687 799 4.603989 ATGTATGGTCTCTCTCTGCATG 57.396 45.455 0.00 0.00 0.00 4.06
688 800 3.635591 TGTATGGTCTCTCTCTGCATGA 58.364 45.455 0.00 0.00 0.00 3.07
689 801 3.382865 TGTATGGTCTCTCTCTGCATGAC 59.617 47.826 0.00 0.00 0.00 3.06
690 802 2.228545 TGGTCTCTCTCTGCATGACT 57.771 50.000 0.00 0.00 0.00 3.41
691 803 2.098614 TGGTCTCTCTCTGCATGACTC 58.901 52.381 0.00 0.00 0.00 3.36
692 804 2.291475 TGGTCTCTCTCTGCATGACTCT 60.291 50.000 0.00 0.00 0.00 3.24
693 805 2.760092 GGTCTCTCTCTGCATGACTCTT 59.240 50.000 0.00 0.00 0.00 2.85
694 806 3.195396 GGTCTCTCTCTGCATGACTCTTT 59.805 47.826 0.00 0.00 0.00 2.52
695 807 4.423732 GTCTCTCTCTGCATGACTCTTTC 58.576 47.826 0.00 0.00 0.00 2.62
696 808 3.446873 TCTCTCTCTGCATGACTCTTTCC 59.553 47.826 0.00 0.00 0.00 3.13
697 809 3.439154 TCTCTCTGCATGACTCTTTCCT 58.561 45.455 0.00 0.00 0.00 3.36
698 810 3.195182 TCTCTCTGCATGACTCTTTCCTG 59.805 47.826 0.00 0.00 0.00 3.86
699 811 3.168292 TCTCTGCATGACTCTTTCCTGA 58.832 45.455 0.00 0.00 0.00 3.86
700 812 3.773667 TCTCTGCATGACTCTTTCCTGAT 59.226 43.478 0.00 0.00 0.00 2.90
701 813 4.958581 TCTCTGCATGACTCTTTCCTGATA 59.041 41.667 0.00 0.00 0.00 2.15
702 814 5.016051 TCTGCATGACTCTTTCCTGATAC 57.984 43.478 0.00 0.00 0.00 2.24
703 815 3.785486 TGCATGACTCTTTCCTGATACG 58.215 45.455 0.00 0.00 0.00 3.06
704 816 3.195610 TGCATGACTCTTTCCTGATACGT 59.804 43.478 0.00 0.00 0.00 3.57
705 817 4.401202 TGCATGACTCTTTCCTGATACGTA 59.599 41.667 0.00 0.00 0.00 3.57
706 818 4.740695 GCATGACTCTTTCCTGATACGTAC 59.259 45.833 0.00 0.00 0.00 3.67
707 819 5.678871 GCATGACTCTTTCCTGATACGTACA 60.679 44.000 0.00 0.00 0.00 2.90
708 820 5.562506 TGACTCTTTCCTGATACGTACAG 57.437 43.478 14.49 14.49 35.43 2.74
709 821 5.250982 TGACTCTTTCCTGATACGTACAGA 58.749 41.667 20.00 4.68 37.54 3.41
710 822 5.123502 TGACTCTTTCCTGATACGTACAGAC 59.876 44.000 20.00 5.66 37.54 3.51
711 823 5.008331 ACTCTTTCCTGATACGTACAGACA 58.992 41.667 20.00 9.10 37.54 3.41
712 824 5.124138 ACTCTTTCCTGATACGTACAGACAG 59.876 44.000 20.00 15.67 37.54 3.51
713 825 5.250982 TCTTTCCTGATACGTACAGACAGA 58.749 41.667 20.00 15.44 37.54 3.41
714 826 4.959596 TTCCTGATACGTACAGACAGAC 57.040 45.455 20.00 0.00 37.54 3.51
715 827 2.934553 TCCTGATACGTACAGACAGACG 59.065 50.000 20.00 7.93 44.57 4.18
738 850 7.096551 ACGTAGTAGTACTATCTTAGCTAGCC 58.903 42.308 12.13 0.00 41.94 3.93
739 851 7.039082 ACGTAGTAGTACTATCTTAGCTAGCCT 60.039 40.741 12.13 1.20 41.94 4.58
740 852 8.465999 CGTAGTAGTACTATCTTAGCTAGCCTA 58.534 40.741 12.13 0.13 32.65 3.93
741 853 9.586435 GTAGTAGTACTATCTTAGCTAGCCTAC 57.414 40.741 12.13 11.15 32.65 3.18
742 854 8.204903 AGTAGTACTATCTTAGCTAGCCTACA 57.795 38.462 12.13 0.00 32.14 2.74
743 855 8.096414 AGTAGTACTATCTTAGCTAGCCTACAC 58.904 40.741 12.13 0.00 32.14 2.90
744 856 6.240145 AGTACTATCTTAGCTAGCCTACACC 58.760 44.000 12.13 0.00 0.00 4.16
745 857 4.409187 ACTATCTTAGCTAGCCTACACCC 58.591 47.826 12.13 0.00 0.00 4.61
746 858 2.840640 TCTTAGCTAGCCTACACCCA 57.159 50.000 12.13 0.00 0.00 4.51
747 859 3.110293 TCTTAGCTAGCCTACACCCAA 57.890 47.619 12.13 0.00 0.00 4.12
748 860 3.446968 TCTTAGCTAGCCTACACCCAAA 58.553 45.455 12.13 0.00 0.00 3.28
749 861 3.451178 TCTTAGCTAGCCTACACCCAAAG 59.549 47.826 12.13 2.15 0.00 2.77
750 862 1.952621 AGCTAGCCTACACCCAAAGA 58.047 50.000 12.13 0.00 0.00 2.52
751 863 2.266279 AGCTAGCCTACACCCAAAGAA 58.734 47.619 12.13 0.00 0.00 2.52
752 864 2.642807 AGCTAGCCTACACCCAAAGAAA 59.357 45.455 12.13 0.00 0.00 2.52
753 865 3.010420 GCTAGCCTACACCCAAAGAAAG 58.990 50.000 2.29 0.00 0.00 2.62
754 866 3.307480 GCTAGCCTACACCCAAAGAAAGA 60.307 47.826 2.29 0.00 0.00 2.52
755 867 3.876309 AGCCTACACCCAAAGAAAGAA 57.124 42.857 0.00 0.00 0.00 2.52
756 868 4.178956 AGCCTACACCCAAAGAAAGAAA 57.821 40.909 0.00 0.00 0.00 2.52
757 869 4.145052 AGCCTACACCCAAAGAAAGAAAG 58.855 43.478 0.00 0.00 0.00 2.62
758 870 4.141251 AGCCTACACCCAAAGAAAGAAAGA 60.141 41.667 0.00 0.00 0.00 2.52
759 871 4.583073 GCCTACACCCAAAGAAAGAAAGAA 59.417 41.667 0.00 0.00 0.00 2.52
760 872 5.068591 GCCTACACCCAAAGAAAGAAAGAAA 59.931 40.000 0.00 0.00 0.00 2.52
761 873 6.406512 GCCTACACCCAAAGAAAGAAAGAAAA 60.407 38.462 0.00 0.00 0.00 2.29
762 874 7.203218 CCTACACCCAAAGAAAGAAAGAAAAG 58.797 38.462 0.00 0.00 0.00 2.27
763 875 6.850752 ACACCCAAAGAAAGAAAGAAAAGA 57.149 33.333 0.00 0.00 0.00 2.52
764 876 7.239763 ACACCCAAAGAAAGAAAGAAAAGAA 57.760 32.000 0.00 0.00 0.00 2.52
765 877 7.323420 ACACCCAAAGAAAGAAAGAAAAGAAG 58.677 34.615 0.00 0.00 0.00 2.85
766 878 7.178451 ACACCCAAAGAAAGAAAGAAAAGAAGA 59.822 33.333 0.00 0.00 0.00 2.87
767 879 8.034804 CACCCAAAGAAAGAAAGAAAAGAAGAA 58.965 33.333 0.00 0.00 0.00 2.52
768 880 8.593679 ACCCAAAGAAAGAAAGAAAAGAAGAAA 58.406 29.630 0.00 0.00 0.00 2.52
769 881 9.605275 CCCAAAGAAAGAAAGAAAAGAAGAAAT 57.395 29.630 0.00 0.00 0.00 2.17
847 959 0.693049 AATCGACCCAAGCAGGAACT 59.307 50.000 0.00 0.00 41.22 3.01
857 969 4.760047 CAGGAACTCCACCGGCCG 62.760 72.222 21.04 21.04 34.60 6.13
907 1019 3.400599 GATCCGGGCGTTGTCCCAT 62.401 63.158 0.00 0.00 46.92 4.00
913 1025 1.144057 GGCGTTGTCCCATCGATCT 59.856 57.895 0.00 0.00 0.00 2.75
971 1084 1.144276 CACCACCACACCACACGTA 59.856 57.895 0.00 0.00 0.00 3.57
1013 1126 2.417257 GCATCATGGGAGCGGCAAA 61.417 57.895 1.45 0.00 0.00 3.68
1335 1473 2.606519 TACGGGCTTCTGGCAGGT 60.607 61.111 15.73 5.86 44.01 4.00
1578 1722 0.934496 TGCTCAACTTACGTGTGTGC 59.066 50.000 0.00 4.52 0.00 4.57
1698 1842 3.918544 GCGGGCAGCTTAATTCCA 58.081 55.556 1.25 0.00 44.04 3.53
1757 1902 4.164843 TCCAGTTTGTTAGGCCCATATC 57.835 45.455 0.00 0.00 0.00 1.63
1761 1906 5.192927 CAGTTTGTTAGGCCCATATCAAGA 58.807 41.667 0.00 0.00 0.00 3.02
1770 1915 5.444176 AGGCCCATATCAAGAAGAAGAAAG 58.556 41.667 0.00 0.00 0.00 2.62
1771 1916 4.037327 GGCCCATATCAAGAAGAAGAAAGC 59.963 45.833 0.00 0.00 0.00 3.51
1873 2018 1.202879 TGGGGGTTCTCAATGTGACAC 60.203 52.381 0.00 0.00 0.00 3.67
1910 2055 1.714541 GAGAGATCAGAGGGCCATGA 58.285 55.000 13.09 13.09 0.00 3.07
1979 2610 6.170506 ACAACTTTATTCGTAGAGATGCCAA 58.829 36.000 0.00 0.00 38.43 4.52
1985 2616 3.179443 TCGTAGAGATGCCAATGTTCC 57.821 47.619 0.00 0.00 0.00 3.62
1986 2617 2.766263 TCGTAGAGATGCCAATGTTCCT 59.234 45.455 0.00 0.00 0.00 3.36
2043 2678 4.038642 TCAAATTAACCAACTCAAGGCCAC 59.961 41.667 5.01 0.00 0.00 5.01
2074 2709 4.015764 TGAAGCCATTTTGCTGTATGCTA 58.984 39.130 0.00 0.00 41.80 3.49
2176 2811 6.949352 AAGAAGAAAGATTTTCAGCTCACA 57.051 33.333 4.56 0.00 0.00 3.58
2177 2812 6.949352 AGAAGAAAGATTTTCAGCTCACAA 57.051 33.333 4.56 0.00 0.00 3.33
2186 2821 9.688592 AAGATTTTCAGCTCACAAAAATTAGAG 57.311 29.630 6.93 0.00 33.85 2.43
2202 2837 8.871686 AAAATTAGAGCAAGTAACCAACAAAG 57.128 30.769 0.00 0.00 0.00 2.77
2235 2870 0.755686 ACTGCCTCCTCGGATTGATC 59.244 55.000 0.00 0.00 33.16 2.92
2236 2871 0.755079 CTGCCTCCTCGGATTGATCA 59.245 55.000 0.00 0.00 33.16 2.92
2238 2873 1.134401 TGCCTCCTCGGATTGATCAAC 60.134 52.381 11.07 4.95 33.16 3.18
2239 2874 1.134401 GCCTCCTCGGATTGATCAACA 60.134 52.381 11.07 0.00 33.16 3.33
2240 2875 2.486191 GCCTCCTCGGATTGATCAACAT 60.486 50.000 11.07 0.00 33.16 2.71
2241 2876 3.244215 GCCTCCTCGGATTGATCAACATA 60.244 47.826 11.07 0.00 33.16 2.29
2242 2877 4.310769 CCTCCTCGGATTGATCAACATAC 58.689 47.826 11.07 0.00 33.16 2.39
2243 2878 3.977427 TCCTCGGATTGATCAACATACG 58.023 45.455 11.07 8.87 0.00 3.06
2318 2962 8.323140 GTCATTCAAAGAAATTTTATGATGCCG 58.677 33.333 0.00 0.00 0.00 5.69
2400 3048 3.480470 ACTAGCATGCCACATTCATACC 58.520 45.455 15.66 0.00 0.00 2.73
2531 3225 2.339769 ACTGGGATTATAGTCAGGCCC 58.660 52.381 0.00 0.00 36.11 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.751175 CGGATTTTTGTACTGCTGGAGAA 59.249 43.478 2.24 0.00 0.00 2.87
1 2 3.244422 ACGGATTTTTGTACTGCTGGAGA 60.244 43.478 2.24 0.00 0.00 3.71
2 3 3.074412 ACGGATTTTTGTACTGCTGGAG 58.926 45.455 0.00 0.00 0.00 3.86
3 4 2.811431 CACGGATTTTTGTACTGCTGGA 59.189 45.455 0.00 0.00 0.00 3.86
4 5 2.668279 GCACGGATTTTTGTACTGCTGG 60.668 50.000 0.00 0.00 0.00 4.85
5 6 2.031245 TGCACGGATTTTTGTACTGCTG 60.031 45.455 0.00 0.00 0.00 4.41
6 7 2.226330 TGCACGGATTTTTGTACTGCT 58.774 42.857 0.00 0.00 0.00 4.24
7 8 2.697431 TGCACGGATTTTTGTACTGC 57.303 45.000 0.00 0.00 0.00 4.40
8 9 4.418013 TCATGCACGGATTTTTGTACTG 57.582 40.909 0.00 0.00 0.00 2.74
9 10 4.518970 AGTTCATGCACGGATTTTTGTACT 59.481 37.500 0.00 0.00 0.00 2.73
10 11 4.616802 CAGTTCATGCACGGATTTTTGTAC 59.383 41.667 0.00 0.00 0.00 2.90
11 12 4.277174 ACAGTTCATGCACGGATTTTTGTA 59.723 37.500 2.33 0.00 0.00 2.41
12 13 3.068024 ACAGTTCATGCACGGATTTTTGT 59.932 39.130 2.33 0.00 0.00 2.83
13 14 3.426191 CACAGTTCATGCACGGATTTTTG 59.574 43.478 2.33 0.00 0.00 2.44
14 15 3.317711 TCACAGTTCATGCACGGATTTTT 59.682 39.130 2.33 0.00 0.00 1.94
15 16 2.884012 TCACAGTTCATGCACGGATTTT 59.116 40.909 2.33 0.00 0.00 1.82
16 17 2.503331 TCACAGTTCATGCACGGATTT 58.497 42.857 2.33 0.00 0.00 2.17
17 18 2.183478 TCACAGTTCATGCACGGATT 57.817 45.000 2.33 0.00 0.00 3.01
18 19 1.806542 GTTCACAGTTCATGCACGGAT 59.193 47.619 2.33 0.00 0.00 4.18
19 20 1.202639 AGTTCACAGTTCATGCACGGA 60.203 47.619 2.33 0.00 0.00 4.69
20 21 1.069703 CAGTTCACAGTTCATGCACGG 60.070 52.381 0.00 0.00 0.00 4.94
21 22 1.069703 CCAGTTCACAGTTCATGCACG 60.070 52.381 0.00 0.00 0.00 5.34
22 23 2.031682 GTCCAGTTCACAGTTCATGCAC 60.032 50.000 0.00 0.00 0.00 4.57
23 24 2.221169 GTCCAGTTCACAGTTCATGCA 58.779 47.619 0.00 0.00 0.00 3.96
24 25 1.537202 GGTCCAGTTCACAGTTCATGC 59.463 52.381 0.00 0.00 0.00 4.06
25 26 2.549754 GTGGTCCAGTTCACAGTTCATG 59.450 50.000 0.00 0.00 34.32 3.07
26 27 2.806745 CGTGGTCCAGTTCACAGTTCAT 60.807 50.000 0.00 0.00 33.83 2.57
27 28 1.472552 CGTGGTCCAGTTCACAGTTCA 60.473 52.381 0.00 0.00 33.83 3.18
28 29 1.202486 TCGTGGTCCAGTTCACAGTTC 60.202 52.381 0.00 0.00 33.83 3.01
29 30 0.828022 TCGTGGTCCAGTTCACAGTT 59.172 50.000 0.00 0.00 33.83 3.16
30 31 0.389391 CTCGTGGTCCAGTTCACAGT 59.611 55.000 0.00 0.00 33.83 3.55
31 32 0.389391 ACTCGTGGTCCAGTTCACAG 59.611 55.000 0.00 0.00 33.83 3.66
32 33 1.694844 TACTCGTGGTCCAGTTCACA 58.305 50.000 0.00 0.00 33.83 3.58
33 34 2.609737 CCTTACTCGTGGTCCAGTTCAC 60.610 54.545 0.00 0.00 0.00 3.18
34 35 1.616865 CCTTACTCGTGGTCCAGTTCA 59.383 52.381 0.00 0.00 0.00 3.18
35 36 1.672145 GCCTTACTCGTGGTCCAGTTC 60.672 57.143 0.00 0.00 0.00 3.01
36 37 0.320697 GCCTTACTCGTGGTCCAGTT 59.679 55.000 0.00 0.00 0.00 3.16
37 38 1.542187 GGCCTTACTCGTGGTCCAGT 61.542 60.000 0.00 0.00 0.00 4.00
38 39 1.218316 GGCCTTACTCGTGGTCCAG 59.782 63.158 0.00 0.00 0.00 3.86
39 40 1.122632 TTGGCCTTACTCGTGGTCCA 61.123 55.000 3.32 0.00 0.00 4.02
40 41 0.252197 ATTGGCCTTACTCGTGGTCC 59.748 55.000 3.32 0.00 0.00 4.46
41 42 1.369625 CATTGGCCTTACTCGTGGTC 58.630 55.000 3.32 0.00 0.00 4.02
42 43 0.035439 CCATTGGCCTTACTCGTGGT 60.035 55.000 3.32 0.00 0.00 4.16
43 44 0.251916 TCCATTGGCCTTACTCGTGG 59.748 55.000 3.32 1.84 0.00 4.94
44 45 2.332063 ATCCATTGGCCTTACTCGTG 57.668 50.000 3.32 0.00 0.00 4.35
45 46 3.054361 AGAAATCCATTGGCCTTACTCGT 60.054 43.478 3.32 0.00 0.00 4.18
46 47 3.313526 CAGAAATCCATTGGCCTTACTCG 59.686 47.826 3.32 0.00 0.00 4.18
47 48 4.526970 TCAGAAATCCATTGGCCTTACTC 58.473 43.478 3.32 0.00 0.00 2.59
48 49 4.591321 TCAGAAATCCATTGGCCTTACT 57.409 40.909 3.32 0.00 0.00 2.24
49 50 5.859205 AATCAGAAATCCATTGGCCTTAC 57.141 39.130 3.32 0.00 0.00 2.34
50 51 6.910191 TCTAATCAGAAATCCATTGGCCTTA 58.090 36.000 3.32 0.00 0.00 2.69
51 52 5.769835 TCTAATCAGAAATCCATTGGCCTT 58.230 37.500 3.32 0.00 0.00 4.35
52 53 5.133322 TCTCTAATCAGAAATCCATTGGCCT 59.867 40.000 3.32 0.00 0.00 5.19
53 54 5.380043 TCTCTAATCAGAAATCCATTGGCC 58.620 41.667 0.00 0.00 0.00 5.36
54 55 6.017275 CACTCTCTAATCAGAAATCCATTGGC 60.017 42.308 0.00 0.00 0.00 4.52
55 56 6.017275 GCACTCTCTAATCAGAAATCCATTGG 60.017 42.308 0.00 0.00 0.00 3.16
56 57 6.766944 AGCACTCTCTAATCAGAAATCCATTG 59.233 38.462 0.00 0.00 0.00 2.82
57 58 6.897986 AGCACTCTCTAATCAGAAATCCATT 58.102 36.000 0.00 0.00 0.00 3.16
58 59 6.497624 AGCACTCTCTAATCAGAAATCCAT 57.502 37.500 0.00 0.00 0.00 3.41
59 60 5.451103 CGAGCACTCTCTAATCAGAAATCCA 60.451 44.000 0.00 0.00 37.19 3.41
60 61 4.981674 CGAGCACTCTCTAATCAGAAATCC 59.018 45.833 0.00 0.00 37.19 3.01
61 62 4.444056 GCGAGCACTCTCTAATCAGAAATC 59.556 45.833 0.00 0.00 37.19 2.17
62 63 4.099266 AGCGAGCACTCTCTAATCAGAAAT 59.901 41.667 0.00 0.00 37.19 2.17
63 64 3.445450 AGCGAGCACTCTCTAATCAGAAA 59.555 43.478 0.00 0.00 37.19 2.52
64 65 3.020274 AGCGAGCACTCTCTAATCAGAA 58.980 45.455 0.00 0.00 37.19 3.02
65 66 2.357323 CAGCGAGCACTCTCTAATCAGA 59.643 50.000 0.00 0.00 37.19 3.27
66 67 2.357323 TCAGCGAGCACTCTCTAATCAG 59.643 50.000 0.00 0.00 37.19 2.90
67 68 2.369394 TCAGCGAGCACTCTCTAATCA 58.631 47.619 0.00 0.00 37.19 2.57
68 69 3.307674 CATCAGCGAGCACTCTCTAATC 58.692 50.000 0.00 0.00 37.19 1.75
69 70 2.545532 GCATCAGCGAGCACTCTCTAAT 60.546 50.000 0.00 0.00 37.19 1.73
70 71 1.202348 GCATCAGCGAGCACTCTCTAA 60.202 52.381 0.00 0.00 37.19 2.10
71 72 0.383590 GCATCAGCGAGCACTCTCTA 59.616 55.000 0.00 0.00 37.19 2.43
72 73 1.141449 GCATCAGCGAGCACTCTCT 59.859 57.895 0.00 0.00 37.19 3.10
73 74 3.703547 GCATCAGCGAGCACTCTC 58.296 61.111 0.00 0.00 35.99 3.20
84 85 0.798159 TTGCAACGCTGTAGCATCAG 59.202 50.000 0.00 4.18 42.21 2.90
85 86 0.516877 GTTGCAACGCTGTAGCATCA 59.483 50.000 14.90 0.00 42.21 3.07
86 87 0.179189 GGTTGCAACGCTGTAGCATC 60.179 55.000 22.67 1.56 42.21 3.91
87 88 0.888736 TGGTTGCAACGCTGTAGCAT 60.889 50.000 22.67 0.00 42.21 3.79
88 89 1.098129 TTGGTTGCAACGCTGTAGCA 61.098 50.000 22.67 10.58 42.21 3.49
89 90 0.660300 GTTGGTTGCAACGCTGTAGC 60.660 55.000 22.67 8.04 37.78 3.58
90 91 0.040425 GGTTGGTTGCAACGCTGTAG 60.040 55.000 22.67 0.00 36.01 2.74
91 92 0.748367 TGGTTGGTTGCAACGCTGTA 60.748 50.000 22.67 6.91 36.01 2.74
92 93 1.391157 ATGGTTGGTTGCAACGCTGT 61.391 50.000 22.67 4.44 36.01 4.40
93 94 0.940519 CATGGTTGGTTGCAACGCTG 60.941 55.000 22.67 9.72 36.01 5.18
94 95 1.363443 CATGGTTGGTTGCAACGCT 59.637 52.632 22.67 1.36 36.01 5.07
95 96 1.664333 CCATGGTTGGTTGCAACGC 60.664 57.895 22.67 15.82 38.30 4.84
96 97 4.651585 CCATGGTTGGTTGCAACG 57.348 55.556 22.67 7.40 38.30 4.10
105 106 0.038618 TCTCGTCGACACCATGGTTG 60.039 55.000 16.84 13.47 0.00 3.77
106 107 0.243907 CTCTCGTCGACACCATGGTT 59.756 55.000 16.84 6.99 0.00 3.67
107 108 1.883732 CTCTCGTCGACACCATGGT 59.116 57.895 13.00 13.00 0.00 3.55
108 109 1.517257 GCTCTCGTCGACACCATGG 60.517 63.158 17.16 11.19 0.00 3.66
109 110 0.524392 GAGCTCTCGTCGACACCATG 60.524 60.000 17.16 0.00 0.00 3.66
110 111 0.678366 AGAGCTCTCGTCGACACCAT 60.678 55.000 11.45 0.00 34.09 3.55
111 112 0.036671 TAGAGCTCTCGTCGACACCA 60.037 55.000 22.17 0.00 34.09 4.17
112 113 1.085091 TTAGAGCTCTCGTCGACACC 58.915 55.000 22.17 0.00 34.09 4.16
113 114 2.096174 ACATTAGAGCTCTCGTCGACAC 59.904 50.000 22.17 0.00 34.09 3.67
114 115 2.357075 ACATTAGAGCTCTCGTCGACA 58.643 47.619 22.17 0.00 34.09 4.35
115 116 3.408288 AACATTAGAGCTCTCGTCGAC 57.592 47.619 22.17 5.18 34.09 4.20
116 117 5.558463 CGATAAACATTAGAGCTCTCGTCGA 60.558 44.000 22.17 8.09 34.09 4.20
117 118 4.609295 CGATAAACATTAGAGCTCTCGTCG 59.391 45.833 22.17 14.40 34.09 5.12
118 119 4.380382 GCGATAAACATTAGAGCTCTCGTC 59.620 45.833 22.17 7.13 34.09 4.20
119 120 4.291783 GCGATAAACATTAGAGCTCTCGT 58.708 43.478 22.17 13.41 34.09 4.18
120 121 3.670991 GGCGATAAACATTAGAGCTCTCG 59.329 47.826 22.17 15.26 34.09 4.04
121 122 3.670991 CGGCGATAAACATTAGAGCTCTC 59.329 47.826 22.17 1.21 0.00 3.20
122 123 3.068307 ACGGCGATAAACATTAGAGCTCT 59.932 43.478 22.17 22.17 0.00 4.09
123 124 3.381949 ACGGCGATAAACATTAGAGCTC 58.618 45.455 16.62 5.27 0.00 4.09
124 125 3.454371 ACGGCGATAAACATTAGAGCT 57.546 42.857 16.62 0.00 0.00 4.09
125 126 4.033587 TCAAACGGCGATAAACATTAGAGC 59.966 41.667 16.62 0.00 0.00 4.09
126 127 5.490213 GTCAAACGGCGATAAACATTAGAG 58.510 41.667 16.62 0.00 0.00 2.43
127 128 4.330620 GGTCAAACGGCGATAAACATTAGA 59.669 41.667 16.62 0.00 0.00 2.10
128 129 4.093703 TGGTCAAACGGCGATAAACATTAG 59.906 41.667 16.62 0.00 0.00 1.73
129 130 4.001652 TGGTCAAACGGCGATAAACATTA 58.998 39.130 16.62 0.00 0.00 1.90
130 131 2.814919 TGGTCAAACGGCGATAAACATT 59.185 40.909 16.62 0.00 0.00 2.71
131 132 2.160813 GTGGTCAAACGGCGATAAACAT 59.839 45.455 16.62 0.00 0.00 2.71
132 133 1.532007 GTGGTCAAACGGCGATAAACA 59.468 47.619 16.62 0.00 0.00 2.83
133 134 1.135888 GGTGGTCAAACGGCGATAAAC 60.136 52.381 16.62 6.29 0.00 2.01
134 135 1.158434 GGTGGTCAAACGGCGATAAA 58.842 50.000 16.62 0.00 0.00 1.40
135 136 1.015085 CGGTGGTCAAACGGCGATAA 61.015 55.000 16.62 0.00 0.00 1.75
136 137 1.446445 CGGTGGTCAAACGGCGATA 60.446 57.895 16.62 0.00 0.00 2.92
137 138 2.740826 CGGTGGTCAAACGGCGAT 60.741 61.111 16.62 0.00 0.00 4.58
138 139 4.973055 CCGGTGGTCAAACGGCGA 62.973 66.667 16.62 0.00 41.23 5.54
139 140 4.973055 TCCGGTGGTCAAACGGCG 62.973 66.667 4.80 4.80 46.78 6.46
140 141 2.592287 TTCCGGTGGTCAAACGGC 60.592 61.111 0.00 0.00 46.78 5.68
142 143 0.237235 CATGTTCCGGTGGTCAAACG 59.763 55.000 0.00 0.00 0.00 3.60
143 144 1.600023 TCATGTTCCGGTGGTCAAAC 58.400 50.000 0.00 0.00 0.00 2.93
144 145 2.226330 CTTCATGTTCCGGTGGTCAAA 58.774 47.619 0.00 0.00 0.00 2.69
145 146 1.544537 CCTTCATGTTCCGGTGGTCAA 60.545 52.381 0.00 0.00 0.00 3.18
146 147 0.036164 CCTTCATGTTCCGGTGGTCA 59.964 55.000 0.00 0.00 0.00 4.02
147 148 1.305930 GCCTTCATGTTCCGGTGGTC 61.306 60.000 0.00 0.00 0.00 4.02
148 149 1.303317 GCCTTCATGTTCCGGTGGT 60.303 57.895 0.00 0.00 0.00 4.16
149 150 1.303236 TGCCTTCATGTTCCGGTGG 60.303 57.895 0.00 0.00 0.00 4.61
150 151 1.875963 GTGCCTTCATGTTCCGGTG 59.124 57.895 0.00 0.00 0.00 4.94
151 152 1.671054 CGTGCCTTCATGTTCCGGT 60.671 57.895 0.00 0.00 0.00 5.28
152 153 3.039202 GCGTGCCTTCATGTTCCGG 62.039 63.158 0.00 0.00 0.00 5.14
153 154 2.480555 GCGTGCCTTCATGTTCCG 59.519 61.111 0.00 0.00 0.00 4.30
154 155 1.315257 ATGGCGTGCCTTCATGTTCC 61.315 55.000 12.84 0.00 36.94 3.62
155 156 0.179156 CATGGCGTGCCTTCATGTTC 60.179 55.000 12.84 0.00 35.03 3.18
156 157 1.597797 CCATGGCGTGCCTTCATGTT 61.598 55.000 12.84 0.00 37.24 2.71
157 158 2.048023 CCATGGCGTGCCTTCATGT 61.048 57.895 12.84 0.00 37.24 3.21
158 159 2.802792 CCATGGCGTGCCTTCATG 59.197 61.111 12.84 7.51 38.30 3.07
159 160 3.142838 GCCATGGCGTGCCTTCAT 61.143 61.111 23.48 0.00 36.94 2.57
168 169 2.809706 CAAAGGATGGCCATGGCG 59.190 61.111 29.90 10.13 43.06 5.69
198 199 6.456181 GCGAAAAGTTTCTGAGACATATCCAG 60.456 42.308 0.94 0.00 35.07 3.86
199 200 5.351465 GCGAAAAGTTTCTGAGACATATCCA 59.649 40.000 0.94 0.00 35.07 3.41
202 203 5.352569 CAGGCGAAAAGTTTCTGAGACATAT 59.647 40.000 0.94 0.00 35.07 1.78
203 204 4.690748 CAGGCGAAAAGTTTCTGAGACATA 59.309 41.667 0.94 0.00 35.07 2.29
212 213 1.029681 ACCCACAGGCGAAAAGTTTC 58.970 50.000 0.00 0.00 36.11 2.78
225 226 2.421751 TCCTCGAAAACAAACCCACA 57.578 45.000 0.00 0.00 0.00 4.17
227 228 2.685897 CACTTCCTCGAAAACAAACCCA 59.314 45.455 0.00 0.00 0.00 4.51
230 231 5.395642 TCAAACACTTCCTCGAAAACAAAC 58.604 37.500 0.00 0.00 0.00 2.93
241 242 5.388654 ACATCCAATCTTCAAACACTTCCT 58.611 37.500 0.00 0.00 0.00 3.36
246 247 5.452078 TCCAACATCCAATCTTCAAACAC 57.548 39.130 0.00 0.00 0.00 3.32
293 300 1.611491 GTGGAAGATCACCCGCAAAAA 59.389 47.619 10.83 0.00 33.37 1.94
294 301 1.202879 AGTGGAAGATCACCCGCAAAA 60.203 47.619 16.11 0.00 38.34 2.44
295 302 0.400213 AGTGGAAGATCACCCGCAAA 59.600 50.000 16.11 0.00 38.34 3.68
296 303 1.271856 TAGTGGAAGATCACCCGCAA 58.728 50.000 16.11 0.00 38.34 4.85
297 304 1.271856 TTAGTGGAAGATCACCCGCA 58.728 50.000 16.11 3.55 38.34 5.69
298 305 2.280628 CTTTAGTGGAAGATCACCCGC 58.719 52.381 8.41 8.41 38.34 6.13
299 306 3.611766 ACTTTAGTGGAAGATCACCCG 57.388 47.619 0.00 0.00 38.34 5.28
300 307 6.183360 GCAATAACTTTAGTGGAAGATCACCC 60.183 42.308 0.00 0.00 38.34 4.61
301 308 6.456988 CGCAATAACTTTAGTGGAAGATCACC 60.457 42.308 0.00 0.00 38.34 4.02
302 309 6.456988 CCGCAATAACTTTAGTGGAAGATCAC 60.457 42.308 0.00 0.00 37.89 3.06
303 310 5.584649 CCGCAATAACTTTAGTGGAAGATCA 59.415 40.000 0.00 0.00 33.57 2.92
304 311 5.007724 CCCGCAATAACTTTAGTGGAAGATC 59.992 44.000 0.00 0.00 33.57 2.75
305 312 4.881850 CCCGCAATAACTTTAGTGGAAGAT 59.118 41.667 0.00 0.00 33.57 2.40
306 313 4.258543 CCCGCAATAACTTTAGTGGAAGA 58.741 43.478 0.00 0.00 33.57 2.87
307 314 4.007659 ACCCGCAATAACTTTAGTGGAAG 58.992 43.478 0.00 0.00 33.57 3.46
308 315 3.754323 CACCCGCAATAACTTTAGTGGAA 59.246 43.478 0.00 0.00 33.57 3.53
309 316 3.244630 ACACCCGCAATAACTTTAGTGGA 60.245 43.478 0.00 0.00 33.57 4.02
310 317 3.078837 ACACCCGCAATAACTTTAGTGG 58.921 45.455 0.00 0.00 0.00 4.00
311 318 5.866335 TTACACCCGCAATAACTTTAGTG 57.134 39.130 0.00 0.00 0.00 2.74
312 319 7.825761 ACTATTTACACCCGCAATAACTTTAGT 59.174 33.333 0.00 0.00 0.00 2.24
313 320 8.205131 ACTATTTACACCCGCAATAACTTTAG 57.795 34.615 0.00 0.00 0.00 1.85
314 321 8.564509 AACTATTTACACCCGCAATAACTTTA 57.435 30.769 0.00 0.00 0.00 1.85
315 322 7.457024 AACTATTTACACCCGCAATAACTTT 57.543 32.000 0.00 0.00 0.00 2.66
321 328 3.864243 TCGAACTATTTACACCCGCAAT 58.136 40.909 0.00 0.00 0.00 3.56
323 330 3.056678 TCTTCGAACTATTTACACCCGCA 60.057 43.478 0.00 0.00 0.00 5.69
325 332 7.650504 TGATAATCTTCGAACTATTTACACCCG 59.349 37.037 0.00 0.00 0.00 5.28
326 333 8.882415 TGATAATCTTCGAACTATTTACACCC 57.118 34.615 0.00 0.00 0.00 4.61
340 347 5.175126 AGTTATTCCGCGTTGATAATCTTCG 59.825 40.000 4.92 0.00 0.00 3.79
348 355 5.116069 ACAAAAAGTTATTCCGCGTTGAT 57.884 34.783 4.92 0.00 0.00 2.57
363 371 8.555166 TTATTTCACAAGCTCGTTACAAAAAG 57.445 30.769 0.00 0.00 0.00 2.27
374 382 9.508567 GAGATAACCATTTTATTTCACAAGCTC 57.491 33.333 0.00 0.00 0.00 4.09
401 409 8.422577 AAAATCCCCTTACTGGCATTATTATC 57.577 34.615 0.00 0.00 0.00 1.75
408 416 4.337264 AGAAAAATCCCCTTACTGGCAT 57.663 40.909 0.00 0.00 0.00 4.40
409 417 3.825908 AGAAAAATCCCCTTACTGGCA 57.174 42.857 0.00 0.00 0.00 4.92
411 419 5.083821 TGGAAAGAAAAATCCCCTTACTGG 58.916 41.667 0.00 0.00 34.68 4.00
412 420 6.351286 CCATGGAAAGAAAAATCCCCTTACTG 60.351 42.308 5.56 0.00 34.68 2.74
413 421 5.721480 CCATGGAAAGAAAAATCCCCTTACT 59.279 40.000 5.56 0.00 34.68 2.24
414 422 5.626809 GCCATGGAAAGAAAAATCCCCTTAC 60.627 44.000 18.40 0.00 34.68 2.34
416 424 3.264193 GCCATGGAAAGAAAAATCCCCTT 59.736 43.478 18.40 0.00 34.68 3.95
418 426 2.092968 GGCCATGGAAAGAAAAATCCCC 60.093 50.000 18.40 0.00 34.68 4.81
421 429 3.624410 GCATGGCCATGGAAAGAAAAATC 59.376 43.478 39.72 19.27 39.16 2.17
422 430 3.009253 TGCATGGCCATGGAAAGAAAAAT 59.991 39.130 39.72 4.16 36.19 1.82
426 434 0.896923 GTGCATGGCCATGGAAAGAA 59.103 50.000 39.72 12.19 40.81 2.52
427 435 0.040058 AGTGCATGGCCATGGAAAGA 59.960 50.000 39.72 2.21 40.81 2.52
429 437 0.971959 GGAGTGCATGGCCATGGAAA 60.972 55.000 39.72 14.98 40.81 3.13
439 534 4.151335 GTGATATCGCTTTAGGAGTGCATG 59.849 45.833 9.07 0.00 35.80 4.06
449 544 4.496360 TCAACCAACGTGATATCGCTTTA 58.504 39.130 14.11 0.00 0.00 1.85
453 548 4.091509 GGATATCAACCAACGTGATATCGC 59.908 45.833 20.18 6.18 37.01 4.58
455 550 5.573282 CGAGGATATCAACCAACGTGATATC 59.427 44.000 19.35 19.35 37.01 1.63
458 553 3.383505 TCGAGGATATCAACCAACGTGAT 59.616 43.478 4.83 0.00 39.12 3.06
471 566 6.931840 GTCATCTTTAAAGGCTTCGAGGATAT 59.068 38.462 15.13 0.00 0.00 1.63
478 573 2.223044 GCGGTCATCTTTAAAGGCTTCG 60.223 50.000 15.13 12.92 0.00 3.79
479 574 2.097629 GGCGGTCATCTTTAAAGGCTTC 59.902 50.000 15.13 4.53 0.00 3.86
482 577 0.377203 CGGCGGTCATCTTTAAAGGC 59.623 55.000 15.13 9.02 0.00 4.35
483 578 1.664151 GACGGCGGTCATCTTTAAAGG 59.336 52.381 18.61 0.40 42.91 3.11
496 608 2.180204 GGAATCCACATGACGGCGG 61.180 63.158 13.24 0.00 0.00 6.13
520 632 1.191535 ACTTGTATAGTGGCAGCGGA 58.808 50.000 0.00 0.00 35.19 5.54
521 633 2.100916 AGTACTTGTATAGTGGCAGCGG 59.899 50.000 0.00 0.00 37.73 5.52
522 634 3.372954 GAGTACTTGTATAGTGGCAGCG 58.627 50.000 0.00 0.00 37.73 5.18
523 635 3.492829 GGGAGTACTTGTATAGTGGCAGC 60.493 52.174 0.00 0.00 37.73 5.25
524 636 3.961408 AGGGAGTACTTGTATAGTGGCAG 59.039 47.826 0.00 0.00 37.73 4.85
525 637 3.958798 GAGGGAGTACTTGTATAGTGGCA 59.041 47.826 0.00 0.00 37.73 4.92
526 638 3.321396 GGAGGGAGTACTTGTATAGTGGC 59.679 52.174 0.00 0.00 37.73 5.01
527 639 3.568853 CGGAGGGAGTACTTGTATAGTGG 59.431 52.174 0.00 0.00 37.73 4.00
528 640 4.458397 TCGGAGGGAGTACTTGTATAGTG 58.542 47.826 0.00 0.00 37.73 2.74
529 641 4.785346 TCGGAGGGAGTACTTGTATAGT 57.215 45.455 0.00 0.00 41.04 2.12
530 642 4.701171 GGATCGGAGGGAGTACTTGTATAG 59.299 50.000 0.00 0.00 0.00 1.31
531 643 4.660168 GGATCGGAGGGAGTACTTGTATA 58.340 47.826 0.00 0.00 0.00 1.47
532 644 3.498334 GGATCGGAGGGAGTACTTGTAT 58.502 50.000 0.00 0.00 0.00 2.29
534 646 1.777941 GGATCGGAGGGAGTACTTGT 58.222 55.000 0.00 0.00 0.00 3.16
535 647 0.669077 CGGATCGGAGGGAGTACTTG 59.331 60.000 0.00 0.00 0.00 3.16
538 650 1.618487 ATTCGGATCGGAGGGAGTAC 58.382 55.000 2.99 0.00 0.00 2.73
539 651 2.376695 AATTCGGATCGGAGGGAGTA 57.623 50.000 2.99 0.00 0.00 2.59
541 653 2.240279 AGTAATTCGGATCGGAGGGAG 58.760 52.381 2.99 0.00 0.00 4.30
542 654 2.364324 CAAGTAATTCGGATCGGAGGGA 59.636 50.000 2.99 0.00 0.00 4.20
543 655 2.102588 ACAAGTAATTCGGATCGGAGGG 59.897 50.000 2.99 0.00 0.00 4.30
544 656 3.181479 TGACAAGTAATTCGGATCGGAGG 60.181 47.826 2.99 0.00 0.00 4.30
545 657 4.041740 TGACAAGTAATTCGGATCGGAG 57.958 45.455 2.99 0.00 0.00 4.63
547 659 5.539582 TTTTGACAAGTAATTCGGATCGG 57.460 39.130 0.00 0.00 0.00 4.18
609 721 9.725019 ACTTGTCACAGAAATGAATGTATCTAA 57.275 29.630 0.00 0.00 0.00 2.10
611 723 9.725019 TTACTTGTCACAGAAATGAATGTATCT 57.275 29.630 0.00 0.00 0.00 1.98
615 727 9.683069 GAAATTACTTGTCACAGAAATGAATGT 57.317 29.630 0.00 0.00 0.00 2.71
616 728 8.843733 CGAAATTACTTGTCACAGAAATGAATG 58.156 33.333 0.00 0.00 0.00 2.67
617 729 8.783093 TCGAAATTACTTGTCACAGAAATGAAT 58.217 29.630 0.00 0.00 0.00 2.57
618 730 8.148807 TCGAAATTACTTGTCACAGAAATGAA 57.851 30.769 0.00 0.00 0.00 2.57
619 731 7.722795 TCGAAATTACTTGTCACAGAAATGA 57.277 32.000 0.00 0.00 0.00 2.57
620 732 7.058354 CGTTCGAAATTACTTGTCACAGAAATG 59.942 37.037 0.00 0.00 0.00 2.32
621 733 7.069569 CGTTCGAAATTACTTGTCACAGAAAT 58.930 34.615 0.00 0.00 0.00 2.17
622 734 6.415702 CGTTCGAAATTACTTGTCACAGAAA 58.584 36.000 0.00 0.00 0.00 2.52
623 735 5.050634 CCGTTCGAAATTACTTGTCACAGAA 60.051 40.000 0.00 0.00 0.00 3.02
624 736 4.446385 CCGTTCGAAATTACTTGTCACAGA 59.554 41.667 0.00 0.00 0.00 3.41
625 737 4.446385 TCCGTTCGAAATTACTTGTCACAG 59.554 41.667 0.00 0.00 0.00 3.66
626 738 4.370049 TCCGTTCGAAATTACTTGTCACA 58.630 39.130 0.00 0.00 0.00 3.58
627 739 4.143179 CCTCCGTTCGAAATTACTTGTCAC 60.143 45.833 0.00 0.00 0.00 3.67
628 740 3.991773 CCTCCGTTCGAAATTACTTGTCA 59.008 43.478 0.00 0.00 0.00 3.58
629 741 3.370061 CCCTCCGTTCGAAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
630 742 3.007182 TCCCTCCGTTCGAAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
631 743 3.592059 TCCCTCCGTTCGAAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
632 744 3.260128 ACTCCCTCCGTTCGAAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
633 745 2.830321 ACTCCCTCCGTTCGAAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
634 746 3.242549 ACTCCCTCCGTTCGAAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
635 747 3.763360 TGTACTCCCTCCGTTCGAAATTA 59.237 43.478 0.00 0.00 0.00 1.40
636 748 2.564062 TGTACTCCCTCCGTTCGAAATT 59.436 45.455 0.00 0.00 0.00 1.82
637 749 2.173519 TGTACTCCCTCCGTTCGAAAT 58.826 47.619 0.00 0.00 0.00 2.17
638 750 1.619654 TGTACTCCCTCCGTTCGAAA 58.380 50.000 0.00 0.00 0.00 3.46
639 751 1.542915 CTTGTACTCCCTCCGTTCGAA 59.457 52.381 0.00 0.00 0.00 3.71
640 752 1.171308 CTTGTACTCCCTCCGTTCGA 58.829 55.000 0.00 0.00 0.00 3.71
641 753 1.135460 GTCTTGTACTCCCTCCGTTCG 60.135 57.143 0.00 0.00 0.00 3.95
642 754 1.891150 TGTCTTGTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
643 755 1.893801 CTGTCTTGTACTCCCTCCGTT 59.106 52.381 0.00 0.00 0.00 4.44
644 756 1.075050 TCTGTCTTGTACTCCCTCCGT 59.925 52.381 0.00 0.00 0.00 4.69
645 757 1.835494 TCTGTCTTGTACTCCCTCCG 58.165 55.000 0.00 0.00 0.00 4.63
646 758 4.896482 ACATATCTGTCTTGTACTCCCTCC 59.104 45.833 0.00 0.00 0.00 4.30
647 759 7.309499 CCATACATATCTGTCTTGTACTCCCTC 60.309 44.444 0.00 0.00 36.79 4.30
648 760 6.495181 CCATACATATCTGTCTTGTACTCCCT 59.505 42.308 0.00 0.00 36.79 4.20
649 761 6.267928 ACCATACATATCTGTCTTGTACTCCC 59.732 42.308 0.00 0.00 36.79 4.30
650 762 7.231722 AGACCATACATATCTGTCTTGTACTCC 59.768 40.741 0.00 0.00 36.79 3.85
651 763 8.172352 AGACCATACATATCTGTCTTGTACTC 57.828 38.462 0.00 0.00 36.79 2.59
652 764 8.001875 AGAGACCATACATATCTGTCTTGTACT 58.998 37.037 0.00 0.00 36.48 2.73
653 765 8.172352 AGAGACCATACATATCTGTCTTGTAC 57.828 38.462 0.00 0.00 36.48 2.90
654 766 8.221251 AGAGAGACCATACATATCTGTCTTGTA 58.779 37.037 0.00 0.00 39.39 2.41
655 767 7.066142 AGAGAGACCATACATATCTGTCTTGT 58.934 38.462 0.00 0.00 39.39 3.16
656 768 7.448161 AGAGAGAGACCATACATATCTGTCTTG 59.552 40.741 2.16 0.00 41.69 3.02
657 769 7.448161 CAGAGAGAGACCATACATATCTGTCTT 59.552 40.741 2.16 0.00 41.69 3.01
658 770 6.942005 CAGAGAGAGACCATACATATCTGTCT 59.058 42.308 0.21 0.21 43.63 3.41
659 771 6.349280 GCAGAGAGAGACCATACATATCTGTC 60.349 46.154 0.00 0.00 36.79 3.51
660 772 5.476599 GCAGAGAGAGACCATACATATCTGT 59.523 44.000 0.00 0.00 39.49 3.41
661 773 5.476254 TGCAGAGAGAGACCATACATATCTG 59.524 44.000 0.00 0.00 35.80 2.90
662 774 5.639139 TGCAGAGAGAGACCATACATATCT 58.361 41.667 0.00 0.00 0.00 1.98
663 775 5.973899 TGCAGAGAGAGACCATACATATC 57.026 43.478 0.00 0.00 0.00 1.63
664 776 6.015282 TCATGCAGAGAGAGACCATACATAT 58.985 40.000 0.00 0.00 0.00 1.78
665 777 5.242615 GTCATGCAGAGAGAGACCATACATA 59.757 44.000 0.00 0.00 0.00 2.29
666 778 4.039004 GTCATGCAGAGAGAGACCATACAT 59.961 45.833 0.00 0.00 0.00 2.29
667 779 3.382865 GTCATGCAGAGAGAGACCATACA 59.617 47.826 0.00 0.00 0.00 2.29
668 780 3.636300 AGTCATGCAGAGAGAGACCATAC 59.364 47.826 0.00 0.00 0.00 2.39
669 781 3.888323 GAGTCATGCAGAGAGAGACCATA 59.112 47.826 0.00 0.00 0.00 2.74
670 782 2.694628 GAGTCATGCAGAGAGAGACCAT 59.305 50.000 0.00 0.00 0.00 3.55
671 783 2.098614 GAGTCATGCAGAGAGAGACCA 58.901 52.381 0.00 0.00 0.00 4.02
672 784 2.378038 AGAGTCATGCAGAGAGAGACC 58.622 52.381 0.00 0.00 0.00 3.85
673 785 4.423732 GAAAGAGTCATGCAGAGAGAGAC 58.576 47.826 0.00 0.00 0.00 3.36
674 786 3.446873 GGAAAGAGTCATGCAGAGAGAGA 59.553 47.826 0.00 0.00 0.00 3.10
675 787 3.448301 AGGAAAGAGTCATGCAGAGAGAG 59.552 47.826 0.00 0.00 0.00 3.20
676 788 3.195182 CAGGAAAGAGTCATGCAGAGAGA 59.805 47.826 0.00 0.00 29.99 3.10
677 789 3.195182 TCAGGAAAGAGTCATGCAGAGAG 59.805 47.826 0.00 0.00 37.96 3.20
678 790 3.168292 TCAGGAAAGAGTCATGCAGAGA 58.832 45.455 0.00 0.00 37.96 3.10
679 791 3.606595 TCAGGAAAGAGTCATGCAGAG 57.393 47.619 0.00 0.00 37.96 3.35
680 792 4.440663 CGTATCAGGAAAGAGTCATGCAGA 60.441 45.833 0.00 0.00 37.96 4.26
681 793 3.801050 CGTATCAGGAAAGAGTCATGCAG 59.199 47.826 0.00 0.00 37.96 4.41
682 794 3.195610 ACGTATCAGGAAAGAGTCATGCA 59.804 43.478 0.00 0.00 37.96 3.96
683 795 3.786635 ACGTATCAGGAAAGAGTCATGC 58.213 45.455 0.00 0.00 37.96 4.06
684 796 5.891451 TGTACGTATCAGGAAAGAGTCATG 58.109 41.667 0.00 0.00 39.47 3.07
685 797 5.886474 TCTGTACGTATCAGGAAAGAGTCAT 59.114 40.000 18.68 0.00 34.15 3.06
686 798 5.123502 GTCTGTACGTATCAGGAAAGAGTCA 59.876 44.000 18.68 0.96 34.15 3.41
687 799 5.123502 TGTCTGTACGTATCAGGAAAGAGTC 59.876 44.000 18.68 0.00 34.15 3.36
688 800 5.008331 TGTCTGTACGTATCAGGAAAGAGT 58.992 41.667 18.68 0.00 34.15 3.24
689 801 5.354513 TCTGTCTGTACGTATCAGGAAAGAG 59.645 44.000 18.68 11.27 34.15 2.85
690 802 5.123502 GTCTGTCTGTACGTATCAGGAAAGA 59.876 44.000 18.68 16.04 34.15 2.52
691 803 5.333513 GTCTGTCTGTACGTATCAGGAAAG 58.666 45.833 18.68 14.74 34.15 2.62
692 804 4.142752 CGTCTGTCTGTACGTATCAGGAAA 60.143 45.833 18.68 8.84 34.48 3.13
693 805 3.373130 CGTCTGTCTGTACGTATCAGGAA 59.627 47.826 18.68 10.50 34.48 3.36
694 806 2.934553 CGTCTGTCTGTACGTATCAGGA 59.065 50.000 18.68 9.99 34.48 3.86
695 807 3.320733 CGTCTGTCTGTACGTATCAGG 57.679 52.381 18.68 8.44 34.48 3.86
702 814 5.098893 AGTACTACTACGTCTGTCTGTACG 58.901 45.833 19.20 0.00 44.47 3.67
703 815 8.134895 AGATAGTACTACTACGTCTGTCTGTAC 58.865 40.741 4.31 18.51 32.84 2.90
704 816 8.231692 AGATAGTACTACTACGTCTGTCTGTA 57.768 38.462 4.31 0.00 32.84 2.74
705 817 7.111247 AGATAGTACTACTACGTCTGTCTGT 57.889 40.000 4.31 0.00 32.84 3.41
706 818 9.184062 CTAAGATAGTACTACTACGTCTGTCTG 57.816 40.741 4.31 0.00 32.84 3.51
707 819 7.867403 GCTAAGATAGTACTACTACGTCTGTCT 59.133 40.741 4.31 0.00 32.84 3.41
708 820 7.867403 AGCTAAGATAGTACTACTACGTCTGTC 59.133 40.741 4.31 0.00 32.84 3.51
709 821 7.725251 AGCTAAGATAGTACTACTACGTCTGT 58.275 38.462 4.31 0.00 32.84 3.41
710 822 9.345517 CTAGCTAAGATAGTACTACTACGTCTG 57.654 40.741 4.31 0.00 32.84 3.51
711 823 8.028938 GCTAGCTAAGATAGTACTACTACGTCT 58.971 40.741 7.70 0.78 32.84 4.18
712 824 7.275560 GGCTAGCTAAGATAGTACTACTACGTC 59.724 44.444 15.72 0.00 32.84 4.34
713 825 7.039082 AGGCTAGCTAAGATAGTACTACTACGT 60.039 40.741 15.72 0.00 32.84 3.57
714 826 7.322664 AGGCTAGCTAAGATAGTACTACTACG 58.677 42.308 15.72 1.85 32.84 3.51
715 827 9.586435 GTAGGCTAGCTAAGATAGTACTACTAC 57.414 40.741 15.72 8.27 32.84 2.73
716 828 9.319060 TGTAGGCTAGCTAAGATAGTACTACTA 57.681 37.037 15.72 0.46 35.81 1.82
717 829 8.096414 GTGTAGGCTAGCTAAGATAGTACTACT 58.904 40.741 15.72 2.13 35.81 2.57
718 830 7.334171 GGTGTAGGCTAGCTAAGATAGTACTAC 59.666 44.444 15.72 12.96 35.60 2.73
719 831 7.393216 GGTGTAGGCTAGCTAAGATAGTACTA 58.607 42.308 15.72 4.77 0.00 1.82
720 832 6.240145 GGTGTAGGCTAGCTAAGATAGTACT 58.760 44.000 15.72 0.00 0.00 2.73
721 833 5.415389 GGGTGTAGGCTAGCTAAGATAGTAC 59.585 48.000 15.72 4.78 0.00 2.73
722 834 5.074102 TGGGTGTAGGCTAGCTAAGATAGTA 59.926 44.000 15.72 0.00 0.00 1.82
723 835 4.140994 TGGGTGTAGGCTAGCTAAGATAGT 60.141 45.833 15.72 0.00 0.00 2.12
724 836 4.408276 TGGGTGTAGGCTAGCTAAGATAG 58.592 47.826 15.72 0.00 0.00 2.08
725 837 4.464652 TGGGTGTAGGCTAGCTAAGATA 57.535 45.455 15.72 0.00 0.00 1.98
726 838 3.330126 TGGGTGTAGGCTAGCTAAGAT 57.670 47.619 15.72 0.00 0.00 2.40
727 839 2.840640 TGGGTGTAGGCTAGCTAAGA 57.159 50.000 15.72 0.00 0.00 2.10
728 840 3.451178 TCTTTGGGTGTAGGCTAGCTAAG 59.549 47.826 15.72 5.07 0.00 2.18
729 841 3.446968 TCTTTGGGTGTAGGCTAGCTAA 58.553 45.455 15.72 0.00 0.00 3.09
730 842 3.110293 TCTTTGGGTGTAGGCTAGCTA 57.890 47.619 15.72 2.18 0.00 3.32
731 843 1.952621 TCTTTGGGTGTAGGCTAGCT 58.047 50.000 15.72 3.22 0.00 3.32
732 844 2.781681 TTCTTTGGGTGTAGGCTAGC 57.218 50.000 6.04 6.04 0.00 3.42
733 845 4.553330 TCTTTCTTTGGGTGTAGGCTAG 57.447 45.455 0.00 0.00 0.00 3.42
734 846 4.986054 TTCTTTCTTTGGGTGTAGGCTA 57.014 40.909 0.00 0.00 0.00 3.93
735 847 3.876309 TTCTTTCTTTGGGTGTAGGCT 57.124 42.857 0.00 0.00 0.00 4.58
736 848 4.142038 TCTTTCTTTCTTTGGGTGTAGGC 58.858 43.478 0.00 0.00 0.00 3.93
737 849 6.709018 TTTCTTTCTTTCTTTGGGTGTAGG 57.291 37.500 0.00 0.00 0.00 3.18
738 850 7.996385 TCTTTTCTTTCTTTCTTTGGGTGTAG 58.004 34.615 0.00 0.00 0.00 2.74
739 851 7.948034 TCTTTTCTTTCTTTCTTTGGGTGTA 57.052 32.000 0.00 0.00 0.00 2.90
740 852 6.850752 TCTTTTCTTTCTTTCTTTGGGTGT 57.149 33.333 0.00 0.00 0.00 4.16
741 853 7.547227 TCTTCTTTTCTTTCTTTCTTTGGGTG 58.453 34.615 0.00 0.00 0.00 4.61
742 854 7.718334 TCTTCTTTTCTTTCTTTCTTTGGGT 57.282 32.000 0.00 0.00 0.00 4.51
743 855 9.605275 ATTTCTTCTTTTCTTTCTTTCTTTGGG 57.395 29.630 0.00 0.00 0.00 4.12
759 871 9.612066 TGGTGATTTGCTTTTAATTTCTTCTTT 57.388 25.926 0.00 0.00 0.00 2.52
760 872 9.783081 ATGGTGATTTGCTTTTAATTTCTTCTT 57.217 25.926 0.00 0.00 0.00 2.52
761 873 9.428097 GATGGTGATTTGCTTTTAATTTCTTCT 57.572 29.630 0.00 0.00 0.00 2.85
762 874 9.206870 TGATGGTGATTTGCTTTTAATTTCTTC 57.793 29.630 0.00 0.00 0.00 2.87
763 875 9.558396 TTGATGGTGATTTGCTTTTAATTTCTT 57.442 25.926 0.00 0.00 0.00 2.52
764 876 8.992073 GTTGATGGTGATTTGCTTTTAATTTCT 58.008 29.630 0.00 0.00 0.00 2.52
765 877 8.229811 GGTTGATGGTGATTTGCTTTTAATTTC 58.770 33.333 0.00 0.00 0.00 2.17
766 878 7.718753 TGGTTGATGGTGATTTGCTTTTAATTT 59.281 29.630 0.00 0.00 0.00 1.82
767 879 7.222872 TGGTTGATGGTGATTTGCTTTTAATT 58.777 30.769 0.00 0.00 0.00 1.40
768 880 6.767456 TGGTTGATGGTGATTTGCTTTTAAT 58.233 32.000 0.00 0.00 0.00 1.40
769 881 6.041409 TCTGGTTGATGGTGATTTGCTTTTAA 59.959 34.615 0.00 0.00 0.00 1.52
770 882 5.538053 TCTGGTTGATGGTGATTTGCTTTTA 59.462 36.000 0.00 0.00 0.00 1.52
771 883 4.344679 TCTGGTTGATGGTGATTTGCTTTT 59.655 37.500 0.00 0.00 0.00 2.27
772 884 3.896888 TCTGGTTGATGGTGATTTGCTTT 59.103 39.130 0.00 0.00 0.00 3.51
773 885 3.499338 TCTGGTTGATGGTGATTTGCTT 58.501 40.909 0.00 0.00 0.00 3.91
774 886 3.159213 TCTGGTTGATGGTGATTTGCT 57.841 42.857 0.00 0.00 0.00 3.91
775 887 3.777478 CATCTGGTTGATGGTGATTTGC 58.223 45.455 0.00 0.00 46.55 3.68
816 928 1.059994 GTCGATTGCTTGCGCTGAG 59.940 57.895 9.73 8.06 36.97 3.35
831 943 1.376037 GGAGTTCCTGCTTGGGTCG 60.376 63.158 0.00 0.00 36.20 4.79
857 969 2.029844 GGGTTCAGTCGCTGTGCTC 61.030 63.158 6.72 0.00 32.61 4.26
861 973 2.031163 GCAGGGTTCAGTCGCTGT 59.969 61.111 11.20 0.00 45.78 4.40
907 1019 1.756538 TGTGAAGCATGCCTAGATCGA 59.243 47.619 15.66 0.00 0.00 3.59
913 1025 0.391130 GTCCGTGTGAAGCATGCCTA 60.391 55.000 15.66 0.00 32.85 3.93
960 1073 3.998672 CCGCCCTACGTGTGGTGT 61.999 66.667 15.02 0.00 41.42 4.16
971 1084 2.915659 TTCACGTCTCACCGCCCT 60.916 61.111 0.00 0.00 0.00 5.19
1113 1239 3.512223 GATCGGGATGCAGAGCGCT 62.512 63.158 11.27 11.27 43.06 5.92
1261 1396 4.477975 GACGTCGACGGCCTCCTG 62.478 72.222 37.89 11.83 42.67 3.86
1274 1409 1.805539 CGCACCATCACATCGACGT 60.806 57.895 0.00 0.00 0.00 4.34
1306 1441 2.716017 GCCCGTAGACAGAGCTGCT 61.716 63.158 0.00 0.00 0.00 4.24
1309 1444 0.323908 AGAAGCCCGTAGACAGAGCT 60.324 55.000 0.00 0.00 34.64 4.09
1316 1451 2.359169 CCTGCCAGAAGCCCGTAGA 61.359 63.158 0.00 0.00 42.71 2.59
1527 1668 2.646719 GCACGTACCTGGTCACGA 59.353 61.111 25.01 0.01 40.56 4.35
1578 1722 5.059161 ACAGGACAATGATACATCCATTCG 58.941 41.667 0.00 0.00 32.40 3.34
1757 1902 7.594386 GGAAATTTCTGAGCTTTCTTCTTCTTG 59.406 37.037 17.42 0.00 0.00 3.02
1761 1906 6.548993 ACAGGAAATTTCTGAGCTTTCTTCTT 59.451 34.615 17.42 0.00 36.22 2.52
1770 1915 3.981211 TGCAAACAGGAAATTTCTGAGC 58.019 40.909 17.42 16.96 36.22 4.26
1771 1916 4.446719 GCTTGCAAACAGGAAATTTCTGAG 59.553 41.667 17.42 10.08 36.22 3.35
1873 2018 3.698040 CTCTCCTCCATTTCATTGGTTGG 59.302 47.826 0.00 0.00 38.01 3.77
1979 2610 8.718656 AGACCATAGAAGCTTAAATAGGAACAT 58.281 33.333 0.00 0.00 0.00 2.71
1985 2616 9.770097 TGATCAAGACCATAGAAGCTTAAATAG 57.230 33.333 0.00 0.00 0.00 1.73
2043 2678 5.121142 CAGCAAAATGGCTTCAAATGTAAGG 59.879 40.000 0.00 0.00 42.71 2.69
2090 2725 6.425210 AGTGATTCATGCCTTGCTAGTATA 57.575 37.500 0.00 0.00 0.00 1.47
2176 2811 9.313118 CTTTGTTGGTTACTTGCTCTAATTTTT 57.687 29.630 0.00 0.00 0.00 1.94
2177 2812 8.474831 ACTTTGTTGGTTACTTGCTCTAATTTT 58.525 29.630 0.00 0.00 0.00 1.82
2186 2821 2.429250 ACCCACTTTGTTGGTTACTTGC 59.571 45.455 0.00 0.00 34.44 4.01
2202 2837 3.056821 GGAGGCAGTTAATTTTGACCCAC 60.057 47.826 0.00 0.00 0.00 4.61
2235 2870 4.466567 TTGAACTTGCTGACGTATGTTG 57.533 40.909 0.00 0.00 0.00 3.33
2236 2871 5.493133 TTTTGAACTTGCTGACGTATGTT 57.507 34.783 0.00 0.00 0.00 2.71
2238 2873 6.831769 ACTATTTTGAACTTGCTGACGTATG 58.168 36.000 0.00 0.00 0.00 2.39
2239 2874 7.360946 GGAACTATTTTGAACTTGCTGACGTAT 60.361 37.037 0.00 0.00 0.00 3.06
2240 2875 6.073440 GGAACTATTTTGAACTTGCTGACGTA 60.073 38.462 0.00 0.00 0.00 3.57
2241 2876 5.277828 GGAACTATTTTGAACTTGCTGACGT 60.278 40.000 0.00 0.00 0.00 4.34
2242 2877 5.147162 GGAACTATTTTGAACTTGCTGACG 58.853 41.667 0.00 0.00 0.00 4.35
2243 2878 5.461526 GGGAACTATTTTGAACTTGCTGAC 58.538 41.667 0.00 0.00 0.00 3.51
2316 2960 4.278419 TCATGAGTACTGATATGTCCACGG 59.722 45.833 0.00 0.00 0.00 4.94
2318 2962 7.665690 AGATTCATGAGTACTGATATGTCCAC 58.334 38.462 0.00 0.00 0.00 4.02
2368 3016 2.159198 GGCATGCTAGTTTGGTCATTGG 60.159 50.000 18.92 0.00 0.00 3.16
2400 3048 3.327172 AGAAGATGATGGCCTCTGGTATG 59.673 47.826 3.32 0.00 0.00 2.39
2537 3231 3.746492 GCCTAGCAATGTTCCGTTATAGG 59.254 47.826 0.00 0.00 33.24 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.