Multiple sequence alignment - TraesCS7D01G434300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G434300 chr7D 100.000 3734 0 0 1 3734 554241899 554238166 0.000000e+00 6896.0
1 TraesCS7D01G434300 chr7B 93.130 2198 105 22 786 2950 600702870 600705054 0.000000e+00 3181.0
2 TraesCS7D01G434300 chr7B 91.493 623 34 13 173 784 600701615 600702229 0.000000e+00 839.0
3 TraesCS7D01G434300 chr7B 89.520 458 30 7 2946 3402 600705205 600705645 7.000000e-157 564.0
4 TraesCS7D01G434300 chr7B 89.899 297 26 4 1 294 743546667 743546962 2.720000e-101 379.0
5 TraesCS7D01G434300 chr7B 83.817 241 33 5 2923 3158 600515507 600515746 1.350000e-54 224.0
6 TraesCS7D01G434300 chr7B 82.988 241 36 4 2923 3158 600652789 600653029 2.920000e-51 213.0
7 TraesCS7D01G434300 chr3B 80.338 1658 179 68 350 1911 807381546 807383152 0.000000e+00 1120.0
8 TraesCS7D01G434300 chr3B 82.857 140 21 3 3595 3732 423060770 423060632 5.060000e-24 122.0
9 TraesCS7D01G434300 chr3D 81.259 1382 136 56 614 1911 600259899 600261241 0.000000e+00 1003.0
10 TraesCS7D01G434300 chr3D 84.158 1010 99 30 621 1611 94716614 94717581 0.000000e+00 922.0
11 TraesCS7D01G434300 chr5D 88.776 294 30 3 3 293 377148149 377147856 1.280000e-94 357.0
12 TraesCS7D01G434300 chr6D 89.199 287 28 3 1 285 336516023 336516308 4.590000e-94 355.0
13 TraesCS7D01G434300 chr6D 88.396 293 28 6 6 293 61175484 61175193 7.680000e-92 348.0
14 TraesCS7D01G434300 chr1D 88.475 295 32 2 1 293 485572727 485572433 4.590000e-94 355.0
15 TraesCS7D01G434300 chrUn 87.797 295 32 4 3 294 79775713 79776006 3.570000e-90 342.0
16 TraesCS7D01G434300 chr2B 87.417 302 32 5 1 297 152752281 152751981 3.570000e-90 342.0
17 TraesCS7D01G434300 chr5A 87.542 297 33 4 1 294 521774706 521775001 1.280000e-89 340.0
18 TraesCS7D01G434300 chr6A 87.205 297 34 3 1 293 335743597 335743301 5.980000e-88 335.0
19 TraesCS7D01G434300 chr4A 81.818 143 22 4 3594 3733 550952062 550952203 2.360000e-22 117.0
20 TraesCS7D01G434300 chr3A 100.000 30 0 0 3504 3533 513925030 513925001 5.210000e-04 56.5
21 TraesCS7D01G434300 chr5B 100.000 29 0 0 3504 3532 575975740 575975712 2.000000e-03 54.7
22 TraesCS7D01G434300 chr7A 100.000 28 0 0 3506 3533 143359520 143359493 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G434300 chr7D 554238166 554241899 3733 True 6896 6896 100.000 1 3734 1 chr7D.!!$R1 3733
1 TraesCS7D01G434300 chr7B 600701615 600705645 4030 False 1528 3181 91.381 173 3402 3 chr7B.!!$F4 3229
2 TraesCS7D01G434300 chr3B 807381546 807383152 1606 False 1120 1120 80.338 350 1911 1 chr3B.!!$F1 1561
3 TraesCS7D01G434300 chr3D 600259899 600261241 1342 False 1003 1003 81.259 614 1911 1 chr3D.!!$F2 1297
4 TraesCS7D01G434300 chr3D 94716614 94717581 967 False 922 922 84.158 621 1611 1 chr3D.!!$F1 990

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
533 543 0.033699 AAGATTGAAGGGCTCTGGGC 60.034 55.000 0.00 0.0 40.9 5.36 F
611 621 0.813184 CGCCACAGAATCAAGCCATT 59.187 50.000 0.00 0.0 0.0 3.16 F
1029 1739 1.142870 CTCAGTTGTTCTTCACCCCCA 59.857 52.381 0.00 0.0 0.0 4.96 F
2065 2847 1.308069 CCAAGATGGCCAGGAACACG 61.308 60.000 13.05 0.0 0.0 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1591 2326 0.321122 CTCACCTTCCTGTGGCAGAC 60.321 60.0 0.0 0.0 36.87 3.51 R
2277 3062 0.462047 CGTATGTTCCTGACAGCCCC 60.462 60.0 0.0 0.0 42.62 5.80 R
2387 3172 0.466372 GCTGAAAGGGGTGCCTATCC 60.466 60.0 0.0 0.0 0.00 2.59 R
3053 3993 0.109597 CGCTGGCACTTCCATTTCAC 60.110 55.0 0.0 0.0 45.50 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.523095 GGCGACGAGACATAAGAATGC 59.477 52.381 0.00 0.00 36.50 3.56
23 24 1.188138 GCGACGAGACATAAGAATGCG 59.812 52.381 0.00 0.00 36.50 4.73
24 25 2.451132 CGACGAGACATAAGAATGCGT 58.549 47.619 0.00 0.00 36.50 5.24
25 26 2.464380 CGACGAGACATAAGAATGCGTC 59.536 50.000 0.00 0.00 40.11 5.19
26 27 2.451132 ACGAGACATAAGAATGCGTCG 58.549 47.619 0.00 7.87 42.83 5.12
27 28 1.781429 CGAGACATAAGAATGCGTCGG 59.219 52.381 0.00 0.00 37.70 4.79
28 29 2.540973 CGAGACATAAGAATGCGTCGGA 60.541 50.000 0.00 0.00 37.70 4.55
29 30 2.789893 GAGACATAAGAATGCGTCGGAC 59.210 50.000 0.00 0.00 36.50 4.79
30 31 1.859080 GACATAAGAATGCGTCGGACC 59.141 52.381 1.91 0.00 36.50 4.46
31 32 0.852777 CATAAGAATGCGTCGGACCG 59.147 55.000 7.84 7.84 0.00 4.79
32 33 0.249322 ATAAGAATGCGTCGGACCGG 60.249 55.000 15.25 0.00 0.00 5.28
33 34 1.597797 TAAGAATGCGTCGGACCGGT 61.598 55.000 6.92 6.92 0.00 5.28
34 35 2.433664 GAATGCGTCGGACCGGTT 60.434 61.111 15.25 1.71 0.00 4.44
35 36 2.030958 GAATGCGTCGGACCGGTTT 61.031 57.895 15.25 0.00 0.00 3.27
36 37 2.235536 GAATGCGTCGGACCGGTTTG 62.236 60.000 15.25 4.28 0.00 2.93
37 38 2.999739 AATGCGTCGGACCGGTTTGT 63.000 55.000 15.25 0.00 0.00 2.83
38 39 2.049248 GCGTCGGACCGGTTTGTA 60.049 61.111 15.25 0.00 0.00 2.41
39 40 2.374995 GCGTCGGACCGGTTTGTAC 61.375 63.158 15.25 4.31 0.00 2.90
40 41 1.734117 CGTCGGACCGGTTTGTACC 60.734 63.158 15.25 3.33 41.33 3.34
41 42 1.374631 GTCGGACCGGTTTGTACCC 60.375 63.158 15.25 2.43 41.75 3.69
42 43 2.046988 CGGACCGGTTTGTACCCC 60.047 66.667 9.42 1.54 41.75 4.95
43 44 2.881528 CGGACCGGTTTGTACCCCA 61.882 63.158 9.42 0.00 41.75 4.96
44 45 1.455412 GGACCGGTTTGTACCCCAA 59.545 57.895 9.42 0.00 41.75 4.12
45 46 0.178995 GGACCGGTTTGTACCCCAAA 60.179 55.000 9.42 0.00 41.75 3.28
53 54 2.955342 TTGTACCCCAAACCCAGTAC 57.045 50.000 0.00 0.00 36.47 2.73
54 55 0.686224 TGTACCCCAAACCCAGTACG 59.314 55.000 0.00 0.00 38.31 3.67
55 56 0.686789 GTACCCCAAACCCAGTACGT 59.313 55.000 0.00 0.00 0.00 3.57
56 57 0.686224 TACCCCAAACCCAGTACGTG 59.314 55.000 0.00 0.00 0.00 4.49
58 59 1.969589 CCCAAACCCAGTACGTGGC 60.970 63.158 0.00 0.00 46.45 5.01
59 60 1.072505 CCAAACCCAGTACGTGGCT 59.927 57.895 0.00 0.00 46.45 4.75
60 61 0.953960 CCAAACCCAGTACGTGGCTC 60.954 60.000 0.00 0.00 46.45 4.70
61 62 1.005394 AAACCCAGTACGTGGCTCG 60.005 57.895 7.50 7.50 46.45 5.03
62 63 2.444700 AAACCCAGTACGTGGCTCGG 62.445 60.000 13.91 0.85 46.45 4.63
63 64 3.379445 CCCAGTACGTGGCTCGGT 61.379 66.667 13.91 2.00 46.45 4.69
64 65 2.654877 CCAGTACGTGGCTCGGTT 59.345 61.111 13.91 0.00 40.39 4.44
65 66 1.736645 CCAGTACGTGGCTCGGTTG 60.737 63.158 13.91 8.02 40.39 3.77
66 67 1.736645 CAGTACGTGGCTCGGTTGG 60.737 63.158 13.91 0.00 44.69 3.77
67 68 2.433664 GTACGTGGCTCGGTTGGG 60.434 66.667 13.91 0.00 44.69 4.12
68 69 3.697747 TACGTGGCTCGGTTGGGG 61.698 66.667 13.91 0.00 44.69 4.96
89 90 3.335579 GCCTCCGGCTTTATATGTTAGG 58.664 50.000 0.00 0.00 46.69 2.69
90 91 3.335579 CCTCCGGCTTTATATGTTAGGC 58.664 50.000 0.00 0.00 0.00 3.93
91 92 3.008049 CCTCCGGCTTTATATGTTAGGCT 59.992 47.826 0.00 0.00 32.77 4.58
92 93 4.505039 CCTCCGGCTTTATATGTTAGGCTT 60.505 45.833 0.00 0.00 32.77 4.35
93 94 5.043737 TCCGGCTTTATATGTTAGGCTTT 57.956 39.130 0.00 0.00 32.77 3.51
94 95 4.819630 TCCGGCTTTATATGTTAGGCTTTG 59.180 41.667 0.00 0.00 32.77 2.77
95 96 4.023193 CCGGCTTTATATGTTAGGCTTTGG 60.023 45.833 0.00 0.00 32.77 3.28
96 97 4.023193 CGGCTTTATATGTTAGGCTTTGGG 60.023 45.833 0.00 0.00 32.77 4.12
97 98 4.280929 GGCTTTATATGTTAGGCTTTGGGG 59.719 45.833 0.00 0.00 0.00 4.96
98 99 4.262036 GCTTTATATGTTAGGCTTTGGGGC 60.262 45.833 0.00 0.00 41.20 5.80
99 100 1.981256 ATATGTTAGGCTTTGGGGCG 58.019 50.000 0.00 0.00 45.89 6.13
100 101 0.913205 TATGTTAGGCTTTGGGGCGA 59.087 50.000 0.00 0.00 45.89 5.54
101 102 0.258774 ATGTTAGGCTTTGGGGCGAT 59.741 50.000 0.00 0.00 45.89 4.58
102 103 0.679640 TGTTAGGCTTTGGGGCGATG 60.680 55.000 0.00 0.00 45.89 3.84
103 104 0.679960 GTTAGGCTTTGGGGCGATGT 60.680 55.000 0.00 0.00 45.89 3.06
104 105 0.393808 TTAGGCTTTGGGGCGATGTC 60.394 55.000 0.00 0.00 45.89 3.06
105 106 1.271840 TAGGCTTTGGGGCGATGTCT 61.272 55.000 0.00 0.00 45.89 3.41
106 107 2.409870 GGCTTTGGGGCGATGTCTG 61.410 63.158 0.00 0.00 0.00 3.51
107 108 3.056313 GCTTTGGGGCGATGTCTGC 62.056 63.158 0.00 0.00 0.00 4.26
108 109 1.377725 CTTTGGGGCGATGTCTGCT 60.378 57.895 0.00 0.00 0.00 4.24
109 110 0.962356 CTTTGGGGCGATGTCTGCTT 60.962 55.000 0.00 0.00 0.00 3.91
110 111 1.243342 TTTGGGGCGATGTCTGCTTG 61.243 55.000 0.00 0.00 0.00 4.01
111 112 2.825836 GGGGCGATGTCTGCTTGG 60.826 66.667 0.00 0.00 0.00 3.61
112 113 2.045926 GGGCGATGTCTGCTTGGT 60.046 61.111 0.00 0.00 0.00 3.67
113 114 1.220749 GGGCGATGTCTGCTTGGTA 59.779 57.895 0.00 0.00 0.00 3.25
114 115 0.179045 GGGCGATGTCTGCTTGGTAT 60.179 55.000 0.00 0.00 0.00 2.73
115 116 1.668419 GGCGATGTCTGCTTGGTATT 58.332 50.000 0.00 0.00 0.00 1.89
116 117 2.484770 GGGCGATGTCTGCTTGGTATTA 60.485 50.000 0.00 0.00 0.00 0.98
117 118 2.802816 GGCGATGTCTGCTTGGTATTAG 59.197 50.000 0.00 0.00 0.00 1.73
118 119 2.802816 GCGATGTCTGCTTGGTATTAGG 59.197 50.000 0.00 0.00 0.00 2.69
119 120 2.802816 CGATGTCTGCTTGGTATTAGGC 59.197 50.000 0.00 0.00 0.00 3.93
120 121 3.493350 CGATGTCTGCTTGGTATTAGGCT 60.493 47.826 0.00 0.00 0.00 4.58
121 122 3.543680 TGTCTGCTTGGTATTAGGCTC 57.456 47.619 0.00 0.00 0.00 4.70
122 123 2.159099 TGTCTGCTTGGTATTAGGCTCG 60.159 50.000 0.00 0.00 0.00 5.03
123 124 1.412710 TCTGCTTGGTATTAGGCTCGG 59.587 52.381 0.00 0.00 0.00 4.63
124 125 1.412710 CTGCTTGGTATTAGGCTCGGA 59.587 52.381 0.00 0.00 0.00 4.55
125 126 1.138266 TGCTTGGTATTAGGCTCGGAC 59.862 52.381 0.00 0.00 0.00 4.79
126 127 1.413077 GCTTGGTATTAGGCTCGGACT 59.587 52.381 0.00 0.00 0.00 3.85
127 128 2.626743 GCTTGGTATTAGGCTCGGACTA 59.373 50.000 0.00 0.00 0.00 2.59
128 129 3.258622 GCTTGGTATTAGGCTCGGACTAT 59.741 47.826 0.00 0.00 0.00 2.12
129 130 4.618693 GCTTGGTATTAGGCTCGGACTATC 60.619 50.000 0.00 0.00 0.00 2.08
130 131 3.079578 TGGTATTAGGCTCGGACTATCG 58.920 50.000 0.00 0.00 0.00 2.92
131 132 2.422832 GGTATTAGGCTCGGACTATCGG 59.577 54.545 0.00 0.00 0.00 4.18
132 133 0.889306 ATTAGGCTCGGACTATCGGC 59.111 55.000 0.00 0.00 0.00 5.54
133 134 0.466739 TTAGGCTCGGACTATCGGCA 60.467 55.000 0.00 0.00 0.00 5.69
134 135 1.170919 TAGGCTCGGACTATCGGCAC 61.171 60.000 0.00 0.00 0.00 5.01
135 136 2.027751 GCTCGGACTATCGGCACC 59.972 66.667 0.00 0.00 0.00 5.01
136 137 2.728817 CTCGGACTATCGGCACCC 59.271 66.667 0.00 0.00 0.00 4.61
137 138 2.836360 TCGGACTATCGGCACCCC 60.836 66.667 0.00 0.00 0.00 4.95
138 139 2.838225 CGGACTATCGGCACCCCT 60.838 66.667 0.00 0.00 0.00 4.79
139 140 2.432300 CGGACTATCGGCACCCCTT 61.432 63.158 0.00 0.00 0.00 3.95
140 141 1.446366 GGACTATCGGCACCCCTTC 59.554 63.158 0.00 0.00 0.00 3.46
141 142 1.067582 GACTATCGGCACCCCTTCG 59.932 63.158 0.00 0.00 0.00 3.79
142 143 1.673808 GACTATCGGCACCCCTTCGT 61.674 60.000 0.00 0.00 0.00 3.85
143 144 1.067582 CTATCGGCACCCCTTCGTC 59.932 63.158 0.00 0.00 0.00 4.20
144 145 1.672854 CTATCGGCACCCCTTCGTCA 61.673 60.000 0.00 0.00 0.00 4.35
145 146 1.259142 TATCGGCACCCCTTCGTCAA 61.259 55.000 0.00 0.00 0.00 3.18
146 147 2.521958 ATCGGCACCCCTTCGTCAAG 62.522 60.000 0.00 0.00 0.00 3.02
147 148 2.430367 GGCACCCCTTCGTCAAGT 59.570 61.111 0.00 0.00 0.00 3.16
148 149 1.966451 GGCACCCCTTCGTCAAGTG 60.966 63.158 0.00 0.00 0.00 3.16
149 150 1.070786 GCACCCCTTCGTCAAGTGA 59.929 57.895 0.00 0.00 0.00 3.41
150 151 0.534203 GCACCCCTTCGTCAAGTGAA 60.534 55.000 0.00 0.00 0.00 3.18
151 152 1.882352 GCACCCCTTCGTCAAGTGAAT 60.882 52.381 0.00 0.00 0.00 2.57
152 153 2.614481 GCACCCCTTCGTCAAGTGAATA 60.614 50.000 0.00 0.00 0.00 1.75
153 154 3.262420 CACCCCTTCGTCAAGTGAATAG 58.738 50.000 0.00 0.00 0.00 1.73
154 155 2.236395 ACCCCTTCGTCAAGTGAATAGG 59.764 50.000 0.00 0.00 0.00 2.57
155 156 2.500098 CCCCTTCGTCAAGTGAATAGGA 59.500 50.000 0.00 0.00 0.00 2.94
156 157 3.430929 CCCCTTCGTCAAGTGAATAGGAG 60.431 52.174 0.00 0.00 0.00 3.69
157 158 3.195825 CCCTTCGTCAAGTGAATAGGAGT 59.804 47.826 0.00 0.00 0.00 3.85
158 159 4.401519 CCCTTCGTCAAGTGAATAGGAGTA 59.598 45.833 0.00 0.00 0.00 2.59
159 160 5.450688 CCCTTCGTCAAGTGAATAGGAGTAG 60.451 48.000 0.00 0.00 0.00 2.57
160 161 5.357314 CCTTCGTCAAGTGAATAGGAGTAGA 59.643 44.000 0.00 0.00 0.00 2.59
161 162 6.438259 TTCGTCAAGTGAATAGGAGTAGAG 57.562 41.667 0.00 0.00 0.00 2.43
162 163 5.742063 TCGTCAAGTGAATAGGAGTAGAGA 58.258 41.667 0.00 0.00 0.00 3.10
163 164 5.585445 TCGTCAAGTGAATAGGAGTAGAGAC 59.415 44.000 0.00 0.00 0.00 3.36
164 165 5.354513 CGTCAAGTGAATAGGAGTAGAGACA 59.645 44.000 0.00 0.00 0.00 3.41
165 166 6.457663 CGTCAAGTGAATAGGAGTAGAGACAG 60.458 46.154 0.00 0.00 0.00 3.51
166 167 6.376018 GTCAAGTGAATAGGAGTAGAGACAGT 59.624 42.308 0.00 0.00 0.00 3.55
167 168 6.948886 TCAAGTGAATAGGAGTAGAGACAGTT 59.051 38.462 0.00 0.00 0.00 3.16
168 169 6.767524 AGTGAATAGGAGTAGAGACAGTTG 57.232 41.667 0.00 0.00 0.00 3.16
169 170 6.249951 AGTGAATAGGAGTAGAGACAGTTGT 58.750 40.000 0.00 0.00 0.00 3.32
170 171 6.722129 AGTGAATAGGAGTAGAGACAGTTGTT 59.278 38.462 0.00 0.00 0.00 2.83
171 172 6.809196 GTGAATAGGAGTAGAGACAGTTGTTG 59.191 42.308 0.00 0.00 0.00 3.33
195 196 2.826488 AGATGGTGGCTTCAGACTACT 58.174 47.619 0.00 0.00 0.00 2.57
200 201 4.093743 TGGTGGCTTCAGACTACTTGATA 58.906 43.478 0.00 0.00 0.00 2.15
272 273 0.326522 TTAGATGCAGAGGCCAGGGA 60.327 55.000 5.01 0.00 40.13 4.20
273 274 0.104777 TAGATGCAGAGGCCAGGGAT 60.105 55.000 5.01 0.00 40.13 3.85
275 276 0.767375 GATGCAGAGGCCAGGGATAA 59.233 55.000 5.01 0.00 40.13 1.75
276 277 1.353694 GATGCAGAGGCCAGGGATAAT 59.646 52.381 5.01 0.00 40.13 1.28
285 286 4.315993 AGGCCAGGGATAATCTCCTTTTA 58.684 43.478 5.01 0.00 44.28 1.52
319 323 3.618750 GGGTGAACGACGTGGGGA 61.619 66.667 0.00 0.00 0.00 4.81
320 324 2.048503 GGTGAACGACGTGGGGAG 60.049 66.667 0.00 0.00 0.00 4.30
336 340 4.161377 GTGGGGAGCTAATGAGATCTATCC 59.839 50.000 0.00 0.00 38.23 2.59
337 341 3.383185 GGGGAGCTAATGAGATCTATCCG 59.617 52.174 0.00 0.00 38.23 4.18
357 361 3.929610 CCGCCTTTTGTTCAAAACTGAAA 59.070 39.130 6.61 0.00 0.00 2.69
376 380 9.936329 AACTGAAATAATATTCCATGGTTAGGT 57.064 29.630 12.58 0.00 0.00 3.08
399 403 2.586258 TGATAGGCTTGCGAAGACTC 57.414 50.000 7.43 0.00 46.31 3.36
422 428 6.042777 TCAGTGGAGATAGCGTGATTTAAAG 58.957 40.000 0.00 0.00 0.00 1.85
491 500 2.764572 GTCTCTTTTCCCCTCGGTCATA 59.235 50.000 0.00 0.00 0.00 2.15
533 543 0.033699 AAGATTGAAGGGCTCTGGGC 60.034 55.000 0.00 0.00 40.90 5.36
583 593 7.065204 GCTAACCAAAGATGACCTTCTTAAGAG 59.935 40.741 5.12 0.00 34.89 2.85
611 621 0.813184 CGCCACAGAATCAAGCCATT 59.187 50.000 0.00 0.00 0.00 3.16
612 622 1.203052 CGCCACAGAATCAAGCCATTT 59.797 47.619 0.00 0.00 0.00 2.32
624 641 2.689983 CAAGCCATTTCACTATGGTCCC 59.310 50.000 0.00 0.00 45.65 4.46
662 679 9.520515 AGACTTGATGGTGAATACTTTTAACAT 57.479 29.630 0.00 0.00 31.90 2.71
769 804 6.729187 CAGTTTGGCCTGATTTATTAGCTAC 58.271 40.000 3.32 0.00 34.23 3.58
770 805 5.527582 AGTTTGGCCTGATTTATTAGCTACG 59.472 40.000 3.32 0.00 0.00 3.51
771 806 4.682778 TGGCCTGATTTATTAGCTACGT 57.317 40.909 3.32 0.00 0.00 3.57
772 807 5.794726 TGGCCTGATTTATTAGCTACGTA 57.205 39.130 3.32 0.00 0.00 3.57
908 1588 1.699634 TCAGCAAGCTGGGACTAAACT 59.300 47.619 20.78 0.00 43.75 2.66
975 1671 8.989131 GTTCTATGGATGCTATAAATACCCCTA 58.011 37.037 0.00 0.00 0.00 3.53
976 1672 9.744125 TTCTATGGATGCTATAAATACCCCTAT 57.256 33.333 0.00 0.00 0.00 2.57
981 1691 7.092444 TGGATGCTATAAATACCCCTATCCAAG 60.092 40.741 0.00 0.00 38.74 3.61
1021 1731 7.181125 ACTTCATAGGTATCCTCAGTTGTTCTT 59.819 37.037 0.00 0.00 34.61 2.52
1022 1732 7.113658 TCATAGGTATCCTCAGTTGTTCTTC 57.886 40.000 0.00 0.00 34.61 2.87
1023 1733 6.667848 TCATAGGTATCCTCAGTTGTTCTTCA 59.332 38.462 0.00 0.00 34.61 3.02
1029 1739 1.142870 CTCAGTTGTTCTTCACCCCCA 59.857 52.381 0.00 0.00 0.00 4.96
1061 1779 1.962807 TGGCCAATTTCAAGGTCACTG 59.037 47.619 0.61 0.00 33.91 3.66
1117 1838 5.010922 TGACTTCCAAAGCTTGTATTTGCAT 59.989 36.000 0.00 0.00 36.52 3.96
1123 1844 6.380846 TCCAAAGCTTGTATTTGCATAGGATT 59.619 34.615 0.00 0.00 36.52 3.01
1125 1846 8.196771 CCAAAGCTTGTATTTGCATAGGATTAA 58.803 33.333 0.00 0.00 36.52 1.40
1365 2092 6.816640 TCCTGTAATGTGCTAACATGTTACTC 59.183 38.462 14.35 9.64 46.58 2.59
1368 2095 8.251750 TGTAATGTGCTAACATGTTACTCTTC 57.748 34.615 14.35 4.81 46.58 2.87
1370 2097 7.986085 AATGTGCTAACATGTTACTCTTCTT 57.014 32.000 14.35 2.27 46.58 2.52
1371 2098 7.986085 ATGTGCTAACATGTTACTCTTCTTT 57.014 32.000 14.35 0.00 45.51 2.52
1372 2099 9.502091 AATGTGCTAACATGTTACTCTTCTTTA 57.498 29.630 14.35 0.00 46.58 1.85
1373 2100 8.534333 TGTGCTAACATGTTACTCTTCTTTAG 57.466 34.615 14.35 3.95 0.00 1.85
1422 2151 9.124807 CATGCATATGATATTTGTGAATCACAC 57.875 33.333 16.50 4.79 39.15 3.82
1462 2191 3.119708 GCTTTCTGTAATGGGAGCAACTG 60.120 47.826 0.00 0.00 0.00 3.16
1503 2232 1.463674 CTATTGTTGGTGGGACTGGC 58.536 55.000 0.00 0.00 0.00 4.85
1551 2280 9.565213 GTCATCCAGAGAAAAATACATCAAAAG 57.435 33.333 0.00 0.00 0.00 2.27
1557 2286 8.514594 CAGAGAAAAATACATCAAAAGGTAGCA 58.485 33.333 0.00 0.00 0.00 3.49
1591 2326 7.530863 TGTATTAGAGCTTACTATCGATGCAG 58.469 38.462 8.54 0.18 0.00 4.41
1667 2418 9.262472 CACTCAAACTTTAGATTTTACATACGC 57.738 33.333 0.00 0.00 0.00 4.42
1795 2564 6.219417 TGTGCATTTCTCAAAGGAAAGAAA 57.781 33.333 0.00 0.53 43.52 2.52
1796 2565 6.042143 TGTGCATTTCTCAAAGGAAAGAAAC 58.958 36.000 0.00 0.00 42.52 2.78
1998 2780 4.034858 TCTGTACGCCTAAAGAGTATGACG 59.965 45.833 0.00 0.00 0.00 4.35
2023 2805 6.422223 GTCTTCCGTCATTATGCTGTTAATG 58.578 40.000 7.76 7.76 39.75 1.90
2065 2847 1.308069 CCAAGATGGCCAGGAACACG 61.308 60.000 13.05 0.00 0.00 4.49
2124 2906 5.705609 ACAAAGTTGACAGTGTGAGTTTT 57.294 34.783 0.00 0.00 0.00 2.43
2256 3041 2.237643 TGGCAGCAAACATTTCAGCTA 58.762 42.857 0.00 0.00 35.19 3.32
2349 3134 3.844211 TGTATTCCCTTAAGCTGGTCACT 59.156 43.478 0.00 0.00 0.00 3.41
2387 3172 0.036294 GGACCTTTCGGAACTCCTGG 60.036 60.000 0.00 0.00 0.00 4.45
2412 3197 0.318441 GCACCCCTTTCAGCTTTTCC 59.682 55.000 0.00 0.00 0.00 3.13
2453 3238 1.004745 TGTGAGCTTCTTTGGGGGATC 59.995 52.381 0.00 0.00 0.00 3.36
2559 3344 7.743104 ACAATTTTCGACTGTAGCAATAAGAG 58.257 34.615 0.00 0.00 0.00 2.85
2562 3347 2.100916 TCGACTGTAGCAATAAGAGGGC 59.899 50.000 0.00 0.00 0.00 5.19
2584 3369 3.571748 GGTTCTCCCTAAACCAGCC 57.428 57.895 0.26 0.00 44.61 4.85
2653 3438 0.609131 ACCTACACCATGCCACAAGC 60.609 55.000 0.00 0.00 44.14 4.01
2788 3573 9.289782 GAGGACATGCTTATTTATGGTTAATCT 57.710 33.333 0.00 0.00 0.00 2.40
2805 3590 9.108111 TGGTTAATCTCTTTAAGGTCCTTCTAA 57.892 33.333 7.61 3.27 30.46 2.10
2829 3614 2.147958 GTTGCAACCGAACTATCACCA 58.852 47.619 19.15 0.00 0.00 4.17
2839 3624 3.622612 CGAACTATCACCATGTTGATGCA 59.377 43.478 15.42 0.00 36.84 3.96
2851 3636 5.507482 CCATGTTGATGCAATCTCATCCTTC 60.507 44.000 0.00 0.00 45.81 3.46
2853 3638 5.011586 TGTTGATGCAATCTCATCCTTCAA 58.988 37.500 0.00 0.00 45.81 2.69
2858 3643 5.319140 TGCAATCTCATCCTTCAAATGTG 57.681 39.130 0.00 0.00 0.00 3.21
3030 3970 5.512298 TGGTCAAATTGATCAGACATCCAT 58.488 37.500 4.60 0.00 31.53 3.41
3033 3973 6.238676 GGTCAAATTGATCAGACATCCATCTG 60.239 42.308 13.11 0.00 46.40 2.90
3053 3993 3.364062 TGGCACACATAAAAACGAAACG 58.636 40.909 0.00 0.00 0.00 3.60
3055 3995 3.178814 GGCACACATAAAAACGAAACGTG 59.821 43.478 0.00 0.00 39.99 4.49
3067 4007 2.286772 ACGAAACGTGAAATGGAAGTGC 60.287 45.455 0.00 0.00 39.18 4.40
3095 4035 2.768253 AGTGTTCATCGCTCCATTGA 57.232 45.000 0.00 0.00 30.20 2.57
3109 4049 5.449588 CGCTCCATTGAATATTTGCAAGACT 60.450 40.000 0.00 0.00 0.00 3.24
3110 4050 5.747197 GCTCCATTGAATATTTGCAAGACTG 59.253 40.000 0.00 0.00 0.00 3.51
3143 4083 0.394762 TGGGAGCTCAATGCCATGTC 60.395 55.000 17.19 0.00 44.23 3.06
3161 4101 2.167487 TGTCGCATGGTTATAGCACTCA 59.833 45.455 0.00 0.00 0.00 3.41
3170 4110 1.617322 TATAGCACTCACCTAGCCGG 58.383 55.000 0.00 0.00 39.35 6.13
3172 4112 0.613853 TAGCACTCACCTAGCCGGTT 60.614 55.000 1.90 0.00 46.37 4.44
3173 4113 1.448013 GCACTCACCTAGCCGGTTC 60.448 63.158 1.90 0.00 46.37 3.62
3174 4114 1.218316 CACTCACCTAGCCGGTTCC 59.782 63.158 1.90 0.00 46.37 3.62
3175 4115 1.229082 ACTCACCTAGCCGGTTCCA 60.229 57.895 1.90 0.00 46.37 3.53
3176 4116 0.617820 ACTCACCTAGCCGGTTCCAT 60.618 55.000 1.90 0.00 46.37 3.41
3177 4117 0.179073 CTCACCTAGCCGGTTCCATG 60.179 60.000 1.90 0.00 46.37 3.66
3178 4118 1.819632 CACCTAGCCGGTTCCATGC 60.820 63.158 1.90 0.00 46.37 4.06
3179 4119 1.995626 ACCTAGCCGGTTCCATGCT 60.996 57.895 1.90 7.75 46.37 3.79
3180 4120 1.224592 CCTAGCCGGTTCCATGCTT 59.775 57.895 1.90 0.00 36.57 3.91
3181 4121 0.815615 CCTAGCCGGTTCCATGCTTC 60.816 60.000 1.90 0.00 36.57 3.86
3182 4122 0.107703 CTAGCCGGTTCCATGCTTCA 60.108 55.000 1.90 0.00 36.57 3.02
3183 4123 0.326595 TAGCCGGTTCCATGCTTCAA 59.673 50.000 1.90 0.00 36.57 2.69
3184 4124 1.212751 GCCGGTTCCATGCTTCAAC 59.787 57.895 1.90 0.00 0.00 3.18
3185 4125 1.883021 CCGGTTCCATGCTTCAACC 59.117 57.895 0.00 0.00 36.91 3.77
3192 4132 1.597797 CCATGCTTCAACCGCACCAT 61.598 55.000 0.00 0.00 40.65 3.55
3208 4148 4.010349 GCACCATTACTAGGAAACTGCTT 58.990 43.478 0.00 0.00 43.88 3.91
3216 4156 7.729124 TTACTAGGAAACTGCTTATAGGTGT 57.271 36.000 0.00 0.00 43.88 4.16
3226 4166 4.523083 TGCTTATAGGTGTGGTCAAATCC 58.477 43.478 0.00 0.00 0.00 3.01
3231 4171 1.241315 GGTGTGGTCAAATCCGTGGG 61.241 60.000 0.00 0.00 0.00 4.61
3232 4172 1.074072 TGTGGTCAAATCCGTGGGG 59.926 57.895 0.00 0.00 0.00 4.96
3234 4174 2.157452 TGGTCAAATCCGTGGGGGT 61.157 57.895 0.00 0.00 37.00 4.95
3235 4175 0.841158 TGGTCAAATCCGTGGGGGTA 60.841 55.000 0.00 0.00 37.00 3.69
3236 4176 0.107361 GGTCAAATCCGTGGGGGTAG 60.107 60.000 0.00 0.00 37.00 3.18
3238 4178 1.453197 CAAATCCGTGGGGGTAGGC 60.453 63.158 0.00 0.00 37.00 3.93
3293 4234 0.667993 AGTGGCGTGTGGAAATGTTG 59.332 50.000 0.00 0.00 0.00 3.33
3298 4239 1.313772 CGTGTGGAAATGTTGGACCA 58.686 50.000 0.00 0.00 0.00 4.02
3319 4260 8.044908 GGACCACCACTAGAATAACTTTATCAA 58.955 37.037 0.00 0.00 35.97 2.57
3323 4264 8.345565 CACCACTAGAATAACTTTATCAATGGC 58.654 37.037 0.00 0.00 0.00 4.40
3325 4266 7.441157 CCACTAGAATAACTTTATCAATGGCGA 59.559 37.037 0.00 0.00 0.00 5.54
3347 4288 0.830444 TCTTCCACGCACCTACCACT 60.830 55.000 0.00 0.00 0.00 4.00
3348 4289 0.670546 CTTCCACGCACCTACCACTG 60.671 60.000 0.00 0.00 0.00 3.66
3349 4290 2.047274 CCACGCACCTACCACTGG 60.047 66.667 0.00 0.00 0.00 4.00
3361 4302 3.782443 CACTGGTAGTCCGGGCCC 61.782 72.222 13.57 13.57 44.02 5.80
3393 4334 1.584495 GTGAAAATCACCCGTGGCC 59.416 57.895 0.00 0.00 41.37 5.36
3410 4351 2.336554 GCCATTGCCACATATAAGCG 57.663 50.000 0.00 0.00 0.00 4.68
3411 4352 1.666888 GCCATTGCCACATATAAGCGC 60.667 52.381 0.00 0.00 0.00 5.92
3412 4353 1.608109 CCATTGCCACATATAAGCGCA 59.392 47.619 11.47 0.00 0.00 6.09
3413 4354 2.605338 CCATTGCCACATATAAGCGCAC 60.605 50.000 11.47 0.00 0.00 5.34
3414 4355 1.743996 TTGCCACATATAAGCGCACA 58.256 45.000 11.47 0.00 0.00 4.57
3415 4356 1.743996 TGCCACATATAAGCGCACAA 58.256 45.000 11.47 0.00 0.00 3.33
3416 4357 1.400142 TGCCACATATAAGCGCACAAC 59.600 47.619 11.47 0.00 0.00 3.32
3417 4358 1.670811 GCCACATATAAGCGCACAACT 59.329 47.619 11.47 0.00 0.00 3.16
3418 4359 2.286418 GCCACATATAAGCGCACAACTC 60.286 50.000 11.47 0.00 0.00 3.01
3419 4360 2.033747 CCACATATAAGCGCACAACTCG 60.034 50.000 11.47 0.00 0.00 4.18
3420 4361 2.603110 CACATATAAGCGCACAACTCGT 59.397 45.455 11.47 0.00 0.00 4.18
3421 4362 3.794564 CACATATAAGCGCACAACTCGTA 59.205 43.478 11.47 0.00 0.00 3.43
3422 4363 4.042398 ACATATAAGCGCACAACTCGTAG 58.958 43.478 11.47 0.00 0.00 3.51
3423 4364 2.649331 ATAAGCGCACAACTCGTAGT 57.351 45.000 11.47 0.00 0.00 2.73
3424 4365 2.427232 TAAGCGCACAACTCGTAGTT 57.573 45.000 11.47 0.00 39.39 2.24
3425 4366 2.427232 AAGCGCACAACTCGTAGTTA 57.573 45.000 11.47 0.00 36.03 2.24
3426 4367 1.978542 AGCGCACAACTCGTAGTTAG 58.021 50.000 11.47 0.00 36.03 2.34
3427 4368 1.538512 AGCGCACAACTCGTAGTTAGA 59.461 47.619 11.47 0.00 36.03 2.10
3428 4369 1.912110 GCGCACAACTCGTAGTTAGAG 59.088 52.381 0.30 0.00 36.03 2.43
3429 4370 2.516923 CGCACAACTCGTAGTTAGAGG 58.483 52.381 0.87 0.00 36.03 3.69
3430 4371 2.161012 CGCACAACTCGTAGTTAGAGGA 59.839 50.000 0.87 0.00 36.03 3.71
3431 4372 3.365666 CGCACAACTCGTAGTTAGAGGAA 60.366 47.826 0.87 0.00 36.03 3.36
3432 4373 3.919197 GCACAACTCGTAGTTAGAGGAAC 59.081 47.826 0.87 0.00 36.03 3.62
3433 4374 4.558095 GCACAACTCGTAGTTAGAGGAACA 60.558 45.833 0.87 0.00 40.86 3.18
3434 4375 5.154932 CACAACTCGTAGTTAGAGGAACAG 58.845 45.833 0.87 0.00 40.86 3.16
3435 4376 4.826183 ACAACTCGTAGTTAGAGGAACAGT 59.174 41.667 0.87 0.00 40.86 3.55
3436 4377 5.154932 CAACTCGTAGTTAGAGGAACAGTG 58.845 45.833 0.00 0.00 40.86 3.66
3437 4378 3.757493 ACTCGTAGTTAGAGGAACAGTGG 59.243 47.826 0.00 0.00 40.86 4.00
3438 4379 2.490903 TCGTAGTTAGAGGAACAGTGGC 59.509 50.000 0.00 0.00 40.86 5.01
3439 4380 2.230508 CGTAGTTAGAGGAACAGTGGCA 59.769 50.000 0.00 0.00 40.86 4.92
3440 4381 3.119101 CGTAGTTAGAGGAACAGTGGCAT 60.119 47.826 0.00 0.00 40.86 4.40
3441 4382 3.340814 AGTTAGAGGAACAGTGGCATG 57.659 47.619 0.00 0.00 40.86 4.06
3442 4383 1.740025 GTTAGAGGAACAGTGGCATGC 59.260 52.381 9.90 9.90 38.02 4.06
3443 4384 0.253044 TAGAGGAACAGTGGCATGCC 59.747 55.000 30.54 30.54 0.00 4.40
3444 4385 2.036256 AGGAACAGTGGCATGCCC 59.964 61.111 33.44 23.56 34.56 5.36
3445 4386 3.443045 GGAACAGTGGCATGCCCG 61.443 66.667 33.44 23.12 35.87 6.13
3446 4387 2.672996 GAACAGTGGCATGCCCGT 60.673 61.111 33.44 23.79 35.87 5.28
3447 4388 2.672996 AACAGTGGCATGCCCGTC 60.673 61.111 33.44 22.29 35.87 4.79
3448 4389 3.196207 AACAGTGGCATGCCCGTCT 62.196 57.895 33.44 24.04 35.87 4.18
3449 4390 1.836999 AACAGTGGCATGCCCGTCTA 61.837 55.000 33.44 12.33 35.87 2.59
3450 4391 1.522355 CAGTGGCATGCCCGTCTAG 60.522 63.158 33.44 17.47 35.87 2.43
3451 4392 1.685765 AGTGGCATGCCCGTCTAGA 60.686 57.895 33.44 10.68 35.87 2.43
3452 4393 1.521681 GTGGCATGCCCGTCTAGAC 60.522 63.158 33.44 19.03 35.87 2.59
3453 4394 1.987306 TGGCATGCCCGTCTAGACA 60.987 57.895 33.44 9.03 35.87 3.41
3454 4395 1.521681 GGCATGCCCGTCTAGACAC 60.522 63.158 27.24 11.48 0.00 3.67
3455 4396 1.521681 GCATGCCCGTCTAGACACC 60.522 63.158 22.37 10.05 0.00 4.16
3456 4397 1.144057 CATGCCCGTCTAGACACCC 59.856 63.158 22.37 9.72 0.00 4.61
3457 4398 1.305802 ATGCCCGTCTAGACACCCA 60.306 57.895 22.37 14.65 0.00 4.51
3458 4399 1.614241 ATGCCCGTCTAGACACCCAC 61.614 60.000 22.37 7.43 0.00 4.61
3459 4400 3.015312 GCCCGTCTAGACACCCACC 62.015 68.421 22.37 1.08 0.00 4.61
3460 4401 2.356780 CCCGTCTAGACACCCACCC 61.357 68.421 22.37 0.00 0.00 4.61
3461 4402 1.608336 CCGTCTAGACACCCACCCA 60.608 63.158 22.37 0.00 0.00 4.51
3462 4403 0.976073 CCGTCTAGACACCCACCCAT 60.976 60.000 22.37 0.00 0.00 4.00
3463 4404 0.175760 CGTCTAGACACCCACCCATG 59.824 60.000 22.37 0.00 0.00 3.66
3464 4405 0.541863 GTCTAGACACCCACCCATGG 59.458 60.000 18.20 4.14 46.81 3.66
3465 4406 0.118346 TCTAGACACCCACCCATGGT 59.882 55.000 11.73 0.00 45.66 3.55
3466 4407 1.363280 TCTAGACACCCACCCATGGTA 59.637 52.381 11.73 0.00 45.66 3.25
3467 4408 2.193127 CTAGACACCCACCCATGGTAA 58.807 52.381 11.73 0.00 45.66 2.85
3468 4409 0.696501 AGACACCCACCCATGGTAAC 59.303 55.000 11.73 0.00 45.66 2.50
3485 4426 6.995511 TGGTAACATGCCTACTAATTTGAC 57.004 37.500 0.00 0.00 46.17 3.18
3486 4427 5.883673 TGGTAACATGCCTACTAATTTGACC 59.116 40.000 0.00 0.00 46.17 4.02
3487 4428 5.298527 GGTAACATGCCTACTAATTTGACCC 59.701 44.000 0.00 0.00 0.00 4.46
3488 4429 4.584638 ACATGCCTACTAATTTGACCCA 57.415 40.909 0.00 0.00 0.00 4.51
3489 4430 4.270008 ACATGCCTACTAATTTGACCCAC 58.730 43.478 0.00 0.00 0.00 4.61
3490 4431 3.359695 TGCCTACTAATTTGACCCACC 57.640 47.619 0.00 0.00 0.00 4.61
3491 4432 2.645297 TGCCTACTAATTTGACCCACCA 59.355 45.455 0.00 0.00 0.00 4.17
3492 4433 3.268334 TGCCTACTAATTTGACCCACCAT 59.732 43.478 0.00 0.00 0.00 3.55
3493 4434 4.475381 TGCCTACTAATTTGACCCACCATA 59.525 41.667 0.00 0.00 0.00 2.74
3494 4435 5.063880 GCCTACTAATTTGACCCACCATAG 58.936 45.833 0.00 0.00 0.00 2.23
3495 4436 5.063880 CCTACTAATTTGACCCACCATAGC 58.936 45.833 0.00 0.00 0.00 2.97
3496 4437 3.898482 ACTAATTTGACCCACCATAGCC 58.102 45.455 0.00 0.00 0.00 3.93
3497 4438 2.159179 AATTTGACCCACCATAGCCC 57.841 50.000 0.00 0.00 0.00 5.19
3498 4439 0.261696 ATTTGACCCACCATAGCCCC 59.738 55.000 0.00 0.00 0.00 5.80
3499 4440 1.143329 TTTGACCCACCATAGCCCCA 61.143 55.000 0.00 0.00 0.00 4.96
3500 4441 1.143329 TTGACCCACCATAGCCCCAA 61.143 55.000 0.00 0.00 0.00 4.12
3501 4442 1.227383 GACCCACCATAGCCCCAAG 59.773 63.158 0.00 0.00 0.00 3.61
3502 4443 1.230149 ACCCACCATAGCCCCAAGA 60.230 57.895 0.00 0.00 0.00 3.02
3503 4444 0.627469 ACCCACCATAGCCCCAAGAT 60.627 55.000 0.00 0.00 0.00 2.40
3504 4445 1.346046 ACCCACCATAGCCCCAAGATA 60.346 52.381 0.00 0.00 0.00 1.98
3505 4446 1.073923 CCCACCATAGCCCCAAGATAC 59.926 57.143 0.00 0.00 0.00 2.24
3506 4447 1.270839 CCACCATAGCCCCAAGATACG 60.271 57.143 0.00 0.00 0.00 3.06
3507 4448 1.416401 CACCATAGCCCCAAGATACGT 59.584 52.381 0.00 0.00 0.00 3.57
3508 4449 2.631062 CACCATAGCCCCAAGATACGTA 59.369 50.000 0.00 0.00 0.00 3.57
3509 4450 2.631545 ACCATAGCCCCAAGATACGTAC 59.368 50.000 0.00 0.00 0.00 3.67
3510 4451 2.897969 CCATAGCCCCAAGATACGTACT 59.102 50.000 0.00 0.00 0.00 2.73
3511 4452 3.056749 CCATAGCCCCAAGATACGTACTC 60.057 52.174 0.00 0.00 0.00 2.59
3512 4453 1.411041 AGCCCCAAGATACGTACTCC 58.589 55.000 0.00 0.00 0.00 3.85
3513 4454 0.391966 GCCCCAAGATACGTACTCCC 59.608 60.000 0.00 0.00 0.00 4.30
3514 4455 2.033208 GCCCCAAGATACGTACTCCCT 61.033 57.143 0.00 0.00 0.00 4.20
3515 4456 1.962100 CCCCAAGATACGTACTCCCTC 59.038 57.143 0.00 0.00 0.00 4.30
3516 4457 1.962100 CCCAAGATACGTACTCCCTCC 59.038 57.143 0.00 0.00 0.00 4.30
3517 4458 1.607628 CCAAGATACGTACTCCCTCCG 59.392 57.143 0.00 0.00 0.00 4.63
3518 4459 2.569059 CAAGATACGTACTCCCTCCGA 58.431 52.381 0.00 0.00 0.00 4.55
3519 4460 3.147629 CAAGATACGTACTCCCTCCGAT 58.852 50.000 0.00 0.00 0.00 4.18
3520 4461 3.056588 AGATACGTACTCCCTCCGATC 57.943 52.381 0.00 0.00 0.00 3.69
3521 4462 2.083002 GATACGTACTCCCTCCGATCC 58.917 57.143 0.00 0.00 0.00 3.36
3522 4463 0.839277 TACGTACTCCCTCCGATCCA 59.161 55.000 0.00 0.00 0.00 3.41
3523 4464 0.185416 ACGTACTCCCTCCGATCCAT 59.815 55.000 0.00 0.00 0.00 3.41
3524 4465 1.422781 ACGTACTCCCTCCGATCCATA 59.577 52.381 0.00 0.00 0.00 2.74
3525 4466 2.041350 ACGTACTCCCTCCGATCCATAT 59.959 50.000 0.00 0.00 0.00 1.78
3526 4467 3.090037 CGTACTCCCTCCGATCCATATT 58.910 50.000 0.00 0.00 0.00 1.28
3527 4468 4.263639 ACGTACTCCCTCCGATCCATATTA 60.264 45.833 0.00 0.00 0.00 0.98
3528 4469 4.703575 CGTACTCCCTCCGATCCATATTAA 59.296 45.833 0.00 0.00 0.00 1.40
3529 4470 5.360144 CGTACTCCCTCCGATCCATATTAAT 59.640 44.000 0.00 0.00 0.00 1.40
3530 4471 6.127423 CGTACTCCCTCCGATCCATATTAATT 60.127 42.308 0.00 0.00 0.00 1.40
3531 4472 6.054860 ACTCCCTCCGATCCATATTAATTG 57.945 41.667 0.00 0.00 0.00 2.32
3532 4473 5.548056 ACTCCCTCCGATCCATATTAATTGT 59.452 40.000 0.00 0.00 0.00 2.71
3533 4474 6.729100 ACTCCCTCCGATCCATATTAATTGTA 59.271 38.462 0.00 0.00 0.00 2.41
3534 4475 7.403231 ACTCCCTCCGATCCATATTAATTGTAT 59.597 37.037 0.00 0.00 0.00 2.29
3535 4476 8.847982 TCCCTCCGATCCATATTAATTGTATA 57.152 34.615 0.00 0.00 0.00 1.47
3536 4477 8.924303 TCCCTCCGATCCATATTAATTGTATAG 58.076 37.037 0.00 0.00 0.00 1.31
3537 4478 8.705594 CCCTCCGATCCATATTAATTGTATAGT 58.294 37.037 0.00 0.00 0.00 2.12
3538 4479 9.534565 CCTCCGATCCATATTAATTGTATAGTG 57.465 37.037 0.00 0.00 0.00 2.74
3539 4480 9.534565 CTCCGATCCATATTAATTGTATAGTGG 57.465 37.037 0.00 0.00 0.00 4.00
3540 4481 9.262240 TCCGATCCATATTAATTGTATAGTGGA 57.738 33.333 0.00 0.00 38.70 4.02
3541 4482 9.884636 CCGATCCATATTAATTGTATAGTGGAA 57.115 33.333 0.00 0.00 37.96 3.53
3555 4496 9.621629 TTGTATAGTGGAACCTTATACCAAATG 57.378 33.333 15.88 0.00 37.80 2.32
3556 4497 8.994500 TGTATAGTGGAACCTTATACCAAATGA 58.006 33.333 15.88 3.13 37.80 2.57
3557 4498 9.490379 GTATAGTGGAACCTTATACCAAATGAG 57.510 37.037 0.00 0.00 37.80 2.90
3558 4499 6.388619 AGTGGAACCTTATACCAAATGAGT 57.611 37.500 0.00 0.00 37.80 3.41
3559 4500 6.180472 AGTGGAACCTTATACCAAATGAGTG 58.820 40.000 0.00 0.00 37.80 3.51
3560 4501 6.012858 AGTGGAACCTTATACCAAATGAGTGA 60.013 38.462 0.00 0.00 37.80 3.41
3561 4502 6.316390 GTGGAACCTTATACCAAATGAGTGAG 59.684 42.308 0.00 0.00 35.40 3.51
3562 4503 6.214615 TGGAACCTTATACCAAATGAGTGAGA 59.785 38.462 0.00 0.00 0.00 3.27
3563 4504 7.110155 GGAACCTTATACCAAATGAGTGAGAA 58.890 38.462 0.00 0.00 0.00 2.87
3564 4505 7.775561 GGAACCTTATACCAAATGAGTGAGAAT 59.224 37.037 0.00 0.00 0.00 2.40
3565 4506 9.178758 GAACCTTATACCAAATGAGTGAGAATT 57.821 33.333 0.00 0.00 0.00 2.17
3574 4515 9.479549 ACCAAATGAGTGAGAATTAATATTGGT 57.520 29.630 0.00 0.00 40.41 3.67
3575 4516 9.740239 CCAAATGAGTGAGAATTAATATTGGTG 57.260 33.333 0.00 0.00 0.00 4.17
3579 4520 9.775854 ATGAGTGAGAATTAATATTGGTGAGAG 57.224 33.333 0.00 0.00 0.00 3.20
3580 4521 8.206867 TGAGTGAGAATTAATATTGGTGAGAGG 58.793 37.037 0.00 0.00 0.00 3.69
3581 4522 8.095452 AGTGAGAATTAATATTGGTGAGAGGT 57.905 34.615 0.00 0.00 0.00 3.85
3582 4523 9.213777 AGTGAGAATTAATATTGGTGAGAGGTA 57.786 33.333 0.00 0.00 0.00 3.08
3583 4524 9.482627 GTGAGAATTAATATTGGTGAGAGGTAG 57.517 37.037 0.00 0.00 0.00 3.18
3584 4525 9.434275 TGAGAATTAATATTGGTGAGAGGTAGA 57.566 33.333 0.00 0.00 0.00 2.59
3592 4533 6.840780 ATTGGTGAGAGGTAGAAATTTTGG 57.159 37.500 0.00 0.00 0.00 3.28
3593 4534 5.319043 TGGTGAGAGGTAGAAATTTTGGT 57.681 39.130 0.00 0.00 0.00 3.67
3594 4535 5.701224 TGGTGAGAGGTAGAAATTTTGGTT 58.299 37.500 0.00 0.00 0.00 3.67
3595 4536 6.133356 TGGTGAGAGGTAGAAATTTTGGTTT 58.867 36.000 0.00 0.00 0.00 3.27
3596 4537 6.609616 TGGTGAGAGGTAGAAATTTTGGTTTT 59.390 34.615 0.00 0.00 0.00 2.43
3597 4538 7.145985 GGTGAGAGGTAGAAATTTTGGTTTTC 58.854 38.462 0.00 0.00 34.08 2.29
3598 4539 7.014326 GGTGAGAGGTAGAAATTTTGGTTTTCT 59.986 37.037 0.00 4.33 43.79 2.52
3599 4540 9.063615 GTGAGAGGTAGAAATTTTGGTTTTCTA 57.936 33.333 0.00 2.60 42.08 2.10
3637 4578 9.706691 TTTTACTGTGTTATTTTTGTTTGACCA 57.293 25.926 0.00 0.00 0.00 4.02
3638 4579 9.877178 TTTACTGTGTTATTTTTGTTTGACCAT 57.123 25.926 0.00 0.00 0.00 3.55
3639 4580 9.877178 TTACTGTGTTATTTTTGTTTGACCATT 57.123 25.926 0.00 0.00 0.00 3.16
3640 4581 8.195617 ACTGTGTTATTTTTGTTTGACCATTG 57.804 30.769 0.00 0.00 0.00 2.82
3641 4582 7.821846 ACTGTGTTATTTTTGTTTGACCATTGT 59.178 29.630 0.00 0.00 0.00 2.71
3642 4583 9.307121 CTGTGTTATTTTTGTTTGACCATTGTA 57.693 29.630 0.00 0.00 0.00 2.41
3643 4584 9.307121 TGTGTTATTTTTGTTTGACCATTGTAG 57.693 29.630 0.00 0.00 0.00 2.74
3644 4585 9.308318 GTGTTATTTTTGTTTGACCATTGTAGT 57.692 29.630 0.00 0.00 0.00 2.73
3645 4586 9.877178 TGTTATTTTTGTTTGACCATTGTAGTT 57.123 25.926 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.524816 TTCTTATGTCTCGTCGCCGC 60.525 55.000 0.00 0.00 0.00 6.53
1 2 1.781429 CATTCTTATGTCTCGTCGCCG 59.219 52.381 0.00 0.00 0.00 6.46
2 3 1.523095 GCATTCTTATGTCTCGTCGCC 59.477 52.381 0.00 0.00 34.12 5.54
3 4 1.188138 CGCATTCTTATGTCTCGTCGC 59.812 52.381 0.00 0.00 34.12 5.19
4 5 2.451132 ACGCATTCTTATGTCTCGTCG 58.549 47.619 0.00 0.00 34.12 5.12
5 6 2.464380 CGACGCATTCTTATGTCTCGTC 59.536 50.000 0.00 0.00 39.39 4.20
7 8 1.781429 CCGACGCATTCTTATGTCTCG 59.219 52.381 0.00 0.00 34.90 4.04
8 9 2.789893 GTCCGACGCATTCTTATGTCTC 59.210 50.000 0.00 0.00 34.12 3.36
9 10 2.481449 GGTCCGACGCATTCTTATGTCT 60.481 50.000 0.00 0.00 34.12 3.41
10 11 1.859080 GGTCCGACGCATTCTTATGTC 59.141 52.381 0.00 0.00 34.12 3.06
11 12 1.801395 CGGTCCGACGCATTCTTATGT 60.801 52.381 4.91 0.00 34.12 2.29
12 13 0.852777 CGGTCCGACGCATTCTTATG 59.147 55.000 4.91 0.00 34.76 1.90
13 14 0.249322 CCGGTCCGACGCATTCTTAT 60.249 55.000 14.39 0.00 0.00 1.73
14 15 1.140161 CCGGTCCGACGCATTCTTA 59.860 57.895 14.39 0.00 0.00 2.10
15 16 2.125673 CCGGTCCGACGCATTCTT 60.126 61.111 14.39 0.00 0.00 2.52
16 17 2.444700 AAACCGGTCCGACGCATTCT 62.445 55.000 14.39 0.00 0.00 2.40
17 18 2.030958 AAACCGGTCCGACGCATTC 61.031 57.895 14.39 0.00 0.00 2.67
18 19 2.031465 AAACCGGTCCGACGCATT 59.969 55.556 14.39 0.00 0.00 3.56
19 20 2.157305 TACAAACCGGTCCGACGCAT 62.157 55.000 14.39 0.00 0.00 4.73
20 21 2.854401 TACAAACCGGTCCGACGCA 61.854 57.895 14.39 0.00 0.00 5.24
21 22 2.049248 TACAAACCGGTCCGACGC 60.049 61.111 14.39 0.00 0.00 5.19
22 23 1.734117 GGTACAAACCGGTCCGACG 60.734 63.158 14.39 0.00 35.62 5.12
23 24 4.266983 GGTACAAACCGGTCCGAC 57.733 61.111 14.39 3.74 35.62 4.79
33 34 2.486907 CGTACTGGGTTTGGGGTACAAA 60.487 50.000 0.00 0.00 46.34 2.83
34 35 1.072015 CGTACTGGGTTTGGGGTACAA 59.928 52.381 0.00 0.00 35.61 2.41
35 36 0.686224 CGTACTGGGTTTGGGGTACA 59.314 55.000 0.00 0.00 35.61 2.90
36 37 0.686789 ACGTACTGGGTTTGGGGTAC 59.313 55.000 0.00 0.00 33.42 3.34
37 38 0.686224 CACGTACTGGGTTTGGGGTA 59.314 55.000 0.00 0.00 0.00 3.69
38 39 1.452801 CACGTACTGGGTTTGGGGT 59.547 57.895 0.00 0.00 0.00 4.95
39 40 1.302993 CCACGTACTGGGTTTGGGG 60.303 63.158 0.00 0.00 36.18 4.96
40 41 1.969589 GCCACGTACTGGGTTTGGG 60.970 63.158 11.72 0.00 41.02 4.12
41 42 3.663202 GCCACGTACTGGGTTTGG 58.337 61.111 11.72 0.00 41.02 3.28
46 47 2.939261 AACCGAGCCACGTACTGGG 61.939 63.158 14.75 14.75 41.02 4.45
47 48 1.736645 CAACCGAGCCACGTACTGG 60.737 63.158 6.91 6.91 44.08 4.00
48 49 1.736645 CCAACCGAGCCACGTACTG 60.737 63.158 0.00 0.00 40.78 2.74
49 50 2.654877 CCAACCGAGCCACGTACT 59.345 61.111 0.00 0.00 40.78 2.73
50 51 2.433664 CCCAACCGAGCCACGTAC 60.434 66.667 0.00 0.00 40.78 3.67
51 52 3.697747 CCCCAACCGAGCCACGTA 61.698 66.667 0.00 0.00 40.78 3.57
70 71 4.273148 AGCCTAACATATAAAGCCGGAG 57.727 45.455 5.05 0.00 0.00 4.63
71 72 4.699925 AAGCCTAACATATAAAGCCGGA 57.300 40.909 5.05 0.00 0.00 5.14
72 73 4.023193 CCAAAGCCTAACATATAAAGCCGG 60.023 45.833 0.00 0.00 0.00 6.13
73 74 4.023193 CCCAAAGCCTAACATATAAAGCCG 60.023 45.833 0.00 0.00 0.00 5.52
74 75 4.280929 CCCCAAAGCCTAACATATAAAGCC 59.719 45.833 0.00 0.00 0.00 4.35
75 76 4.262036 GCCCCAAAGCCTAACATATAAAGC 60.262 45.833 0.00 0.00 0.00 3.51
76 77 4.023193 CGCCCCAAAGCCTAACATATAAAG 60.023 45.833 0.00 0.00 0.00 1.85
77 78 3.886505 CGCCCCAAAGCCTAACATATAAA 59.113 43.478 0.00 0.00 0.00 1.40
78 79 3.136809 TCGCCCCAAAGCCTAACATATAA 59.863 43.478 0.00 0.00 0.00 0.98
79 80 2.706723 TCGCCCCAAAGCCTAACATATA 59.293 45.455 0.00 0.00 0.00 0.86
80 81 1.493022 TCGCCCCAAAGCCTAACATAT 59.507 47.619 0.00 0.00 0.00 1.78
81 82 0.913205 TCGCCCCAAAGCCTAACATA 59.087 50.000 0.00 0.00 0.00 2.29
82 83 0.258774 ATCGCCCCAAAGCCTAACAT 59.741 50.000 0.00 0.00 0.00 2.71
83 84 0.679640 CATCGCCCCAAAGCCTAACA 60.680 55.000 0.00 0.00 0.00 2.41
84 85 0.679960 ACATCGCCCCAAAGCCTAAC 60.680 55.000 0.00 0.00 0.00 2.34
85 86 0.393808 GACATCGCCCCAAAGCCTAA 60.394 55.000 0.00 0.00 0.00 2.69
86 87 1.223487 GACATCGCCCCAAAGCCTA 59.777 57.895 0.00 0.00 0.00 3.93
87 88 2.044946 GACATCGCCCCAAAGCCT 60.045 61.111 0.00 0.00 0.00 4.58
88 89 2.044946 AGACATCGCCCCAAAGCC 60.045 61.111 0.00 0.00 0.00 4.35
89 90 3.056313 GCAGACATCGCCCCAAAGC 62.056 63.158 0.00 0.00 0.00 3.51
90 91 0.962356 AAGCAGACATCGCCCCAAAG 60.962 55.000 0.00 0.00 0.00 2.77
91 92 1.074775 AAGCAGACATCGCCCCAAA 59.925 52.632 0.00 0.00 0.00 3.28
92 93 1.675310 CAAGCAGACATCGCCCCAA 60.675 57.895 0.00 0.00 0.00 4.12
93 94 2.046023 CAAGCAGACATCGCCCCA 60.046 61.111 0.00 0.00 0.00 4.96
94 95 2.252072 TACCAAGCAGACATCGCCCC 62.252 60.000 0.00 0.00 0.00 5.80
95 96 0.179045 ATACCAAGCAGACATCGCCC 60.179 55.000 0.00 0.00 0.00 6.13
96 97 1.668419 AATACCAAGCAGACATCGCC 58.332 50.000 0.00 0.00 0.00 5.54
97 98 2.802816 CCTAATACCAAGCAGACATCGC 59.197 50.000 0.00 0.00 0.00 4.58
98 99 2.802816 GCCTAATACCAAGCAGACATCG 59.197 50.000 0.00 0.00 0.00 3.84
99 100 4.061596 GAGCCTAATACCAAGCAGACATC 58.938 47.826 0.00 0.00 0.00 3.06
100 101 3.493350 CGAGCCTAATACCAAGCAGACAT 60.493 47.826 0.00 0.00 0.00 3.06
101 102 2.159099 CGAGCCTAATACCAAGCAGACA 60.159 50.000 0.00 0.00 0.00 3.41
102 103 2.474816 CGAGCCTAATACCAAGCAGAC 58.525 52.381 0.00 0.00 0.00 3.51
103 104 1.412710 CCGAGCCTAATACCAAGCAGA 59.587 52.381 0.00 0.00 0.00 4.26
104 105 1.412710 TCCGAGCCTAATACCAAGCAG 59.587 52.381 0.00 0.00 0.00 4.24
105 106 1.138266 GTCCGAGCCTAATACCAAGCA 59.862 52.381 0.00 0.00 0.00 3.91
106 107 1.413077 AGTCCGAGCCTAATACCAAGC 59.587 52.381 0.00 0.00 0.00 4.01
107 108 4.379603 CGATAGTCCGAGCCTAATACCAAG 60.380 50.000 0.00 0.00 0.00 3.61
108 109 3.504906 CGATAGTCCGAGCCTAATACCAA 59.495 47.826 0.00 0.00 0.00 3.67
109 110 3.079578 CGATAGTCCGAGCCTAATACCA 58.920 50.000 0.00 0.00 0.00 3.25
110 111 2.422832 CCGATAGTCCGAGCCTAATACC 59.577 54.545 0.00 0.00 0.00 2.73
111 112 2.159407 GCCGATAGTCCGAGCCTAATAC 60.159 54.545 0.00 0.00 0.00 1.89
112 113 2.089980 GCCGATAGTCCGAGCCTAATA 58.910 52.381 0.00 0.00 0.00 0.98
113 114 0.889306 GCCGATAGTCCGAGCCTAAT 59.111 55.000 0.00 0.00 0.00 1.73
114 115 0.466739 TGCCGATAGTCCGAGCCTAA 60.467 55.000 0.00 0.00 0.00 2.69
115 116 1.149854 TGCCGATAGTCCGAGCCTA 59.850 57.895 0.00 0.00 0.00 3.93
116 117 2.123854 TGCCGATAGTCCGAGCCT 60.124 61.111 0.00 0.00 0.00 4.58
117 118 2.027751 GTGCCGATAGTCCGAGCC 59.972 66.667 0.00 0.00 0.00 4.70
118 119 2.027751 GGTGCCGATAGTCCGAGC 59.972 66.667 0.00 0.00 0.00 5.03
119 120 2.728817 GGGTGCCGATAGTCCGAG 59.271 66.667 0.00 0.00 0.00 4.63
120 121 2.836360 GGGGTGCCGATAGTCCGA 60.836 66.667 0.00 0.00 0.00 4.55
121 122 2.365095 GAAGGGGTGCCGATAGTCCG 62.365 65.000 0.00 0.00 0.00 4.79
122 123 1.446366 GAAGGGGTGCCGATAGTCC 59.554 63.158 0.00 0.00 0.00 3.85
123 124 1.067582 CGAAGGGGTGCCGATAGTC 59.932 63.158 0.00 0.00 0.00 2.59
124 125 1.673808 GACGAAGGGGTGCCGATAGT 61.674 60.000 0.00 0.00 0.00 2.12
125 126 1.067582 GACGAAGGGGTGCCGATAG 59.932 63.158 0.00 0.00 0.00 2.08
126 127 1.259142 TTGACGAAGGGGTGCCGATA 61.259 55.000 0.00 0.00 0.00 2.92
127 128 2.521958 CTTGACGAAGGGGTGCCGAT 62.522 60.000 0.00 0.00 0.00 4.18
128 129 3.234630 CTTGACGAAGGGGTGCCGA 62.235 63.158 0.00 0.00 0.00 5.54
129 130 2.742372 CTTGACGAAGGGGTGCCG 60.742 66.667 0.00 0.00 0.00 5.69
130 131 1.966451 CACTTGACGAAGGGGTGCC 60.966 63.158 0.00 0.00 32.95 5.01
131 132 0.534203 TTCACTTGACGAAGGGGTGC 60.534 55.000 0.00 0.00 32.87 5.01
132 133 2.185004 ATTCACTTGACGAAGGGGTG 57.815 50.000 0.00 0.00 32.87 4.61
133 134 2.236395 CCTATTCACTTGACGAAGGGGT 59.764 50.000 0.00 0.00 32.87 4.95
134 135 2.500098 TCCTATTCACTTGACGAAGGGG 59.500 50.000 0.00 0.00 32.87 4.79
135 136 3.195825 ACTCCTATTCACTTGACGAAGGG 59.804 47.826 0.00 0.00 33.37 3.95
136 137 4.457834 ACTCCTATTCACTTGACGAAGG 57.542 45.455 0.00 0.00 32.95 3.46
137 138 6.316640 TCTCTACTCCTATTCACTTGACGAAG 59.683 42.308 0.00 0.00 35.07 3.79
138 139 6.093771 GTCTCTACTCCTATTCACTTGACGAA 59.906 42.308 0.00 0.00 0.00 3.85
139 140 5.585445 GTCTCTACTCCTATTCACTTGACGA 59.415 44.000 0.00 0.00 0.00 4.20
140 141 5.354513 TGTCTCTACTCCTATTCACTTGACG 59.645 44.000 0.00 0.00 0.00 4.35
141 142 6.376018 ACTGTCTCTACTCCTATTCACTTGAC 59.624 42.308 0.00 0.00 0.00 3.18
142 143 6.486056 ACTGTCTCTACTCCTATTCACTTGA 58.514 40.000 0.00 0.00 0.00 3.02
143 144 6.767524 ACTGTCTCTACTCCTATTCACTTG 57.232 41.667 0.00 0.00 0.00 3.16
144 145 6.722129 ACAACTGTCTCTACTCCTATTCACTT 59.278 38.462 0.00 0.00 0.00 3.16
145 146 6.249951 ACAACTGTCTCTACTCCTATTCACT 58.750 40.000 0.00 0.00 0.00 3.41
146 147 6.518208 ACAACTGTCTCTACTCCTATTCAC 57.482 41.667 0.00 0.00 0.00 3.18
147 148 6.572509 GCAACAACTGTCTCTACTCCTATTCA 60.573 42.308 0.00 0.00 0.00 2.57
148 149 5.808030 GCAACAACTGTCTCTACTCCTATTC 59.192 44.000 0.00 0.00 0.00 1.75
149 150 5.482175 AGCAACAACTGTCTCTACTCCTATT 59.518 40.000 0.00 0.00 0.00 1.73
150 151 5.020132 AGCAACAACTGTCTCTACTCCTAT 58.980 41.667 0.00 0.00 0.00 2.57
151 152 4.408276 AGCAACAACTGTCTCTACTCCTA 58.592 43.478 0.00 0.00 0.00 2.94
152 153 3.235200 AGCAACAACTGTCTCTACTCCT 58.765 45.455 0.00 0.00 0.00 3.69
153 154 3.669251 AGCAACAACTGTCTCTACTCC 57.331 47.619 0.00 0.00 0.00 3.85
154 155 6.015027 TCTTAGCAACAACTGTCTCTACTC 57.985 41.667 0.00 0.00 0.00 2.59
155 156 6.393990 CATCTTAGCAACAACTGTCTCTACT 58.606 40.000 0.00 0.00 0.00 2.57
156 157 5.578727 CCATCTTAGCAACAACTGTCTCTAC 59.421 44.000 0.00 0.00 0.00 2.59
157 158 5.246203 ACCATCTTAGCAACAACTGTCTCTA 59.754 40.000 0.00 0.00 0.00 2.43
158 159 4.040952 ACCATCTTAGCAACAACTGTCTCT 59.959 41.667 0.00 0.00 0.00 3.10
159 160 4.153117 CACCATCTTAGCAACAACTGTCTC 59.847 45.833 0.00 0.00 0.00 3.36
160 161 4.067896 CACCATCTTAGCAACAACTGTCT 58.932 43.478 0.00 0.00 0.00 3.41
161 162 3.189287 CCACCATCTTAGCAACAACTGTC 59.811 47.826 0.00 0.00 0.00 3.51
162 163 3.149196 CCACCATCTTAGCAACAACTGT 58.851 45.455 0.00 0.00 0.00 3.55
163 164 2.095059 GCCACCATCTTAGCAACAACTG 60.095 50.000 0.00 0.00 0.00 3.16
164 165 2.162681 GCCACCATCTTAGCAACAACT 58.837 47.619 0.00 0.00 0.00 3.16
165 166 2.162681 AGCCACCATCTTAGCAACAAC 58.837 47.619 0.00 0.00 0.00 3.32
166 167 2.584835 AGCCACCATCTTAGCAACAA 57.415 45.000 0.00 0.00 0.00 2.83
167 168 2.224744 TGAAGCCACCATCTTAGCAACA 60.225 45.455 0.00 0.00 0.00 3.33
168 169 2.421424 CTGAAGCCACCATCTTAGCAAC 59.579 50.000 0.00 0.00 0.00 4.17
169 170 2.305635 TCTGAAGCCACCATCTTAGCAA 59.694 45.455 0.00 0.00 0.00 3.91
170 171 1.908619 TCTGAAGCCACCATCTTAGCA 59.091 47.619 0.00 0.00 0.00 3.49
171 172 2.093235 AGTCTGAAGCCACCATCTTAGC 60.093 50.000 0.00 0.00 0.00 3.09
254 255 0.104777 ATCCCTGGCCTCTGCATCTA 60.105 55.000 3.32 0.00 40.13 1.98
256 257 0.767375 TTATCCCTGGCCTCTGCATC 59.233 55.000 3.32 0.00 40.13 3.91
298 299 2.357034 CACGTCGTTCACCCCTGG 60.357 66.667 0.00 0.00 0.00 4.45
299 300 2.357034 CCACGTCGTTCACCCCTG 60.357 66.667 0.00 0.00 0.00 4.45
300 301 3.622826 CCCACGTCGTTCACCCCT 61.623 66.667 0.00 0.00 0.00 4.79
301 302 4.692475 CCCCACGTCGTTCACCCC 62.692 72.222 0.00 0.00 0.00 4.95
310 314 1.112113 TCTCATTAGCTCCCCACGTC 58.888 55.000 0.00 0.00 0.00 4.34
319 323 3.707316 AGGCGGATAGATCTCATTAGCT 58.293 45.455 0.00 0.00 0.00 3.32
320 324 4.464069 AAGGCGGATAGATCTCATTAGC 57.536 45.455 0.00 0.00 0.00 3.09
336 340 5.717038 ATTTCAGTTTTGAACAAAAGGCG 57.283 34.783 12.09 5.34 42.79 5.52
376 380 3.118629 AGTCTTCGCAAGCCTATCAATCA 60.119 43.478 0.00 0.00 37.18 2.57
399 403 5.812642 ACTTTAAATCACGCTATCTCCACTG 59.187 40.000 0.00 0.00 0.00 3.66
422 428 8.567948 TGAGTTAAGTTGAGAAAATGATCCAAC 58.432 33.333 0.00 0.00 37.84 3.77
491 500 0.617413 CTCCATGGGAGTCAAGCAGT 59.383 55.000 13.02 0.00 44.25 4.40
518 527 1.915078 GCTAGCCCAGAGCCCTTCAA 61.915 60.000 2.29 0.00 45.47 2.69
533 543 4.080863 ACCTTCTTGATGTACCAAGGCTAG 60.081 45.833 10.74 7.07 42.72 3.42
583 593 1.065551 GATTCTGTGGCGGGTAATTGC 59.934 52.381 0.00 0.00 0.00 3.56
624 641 0.037326 TCAAGTCTACGCCTTGCTGG 60.037 55.000 0.00 0.00 39.30 4.85
662 679 3.181455 TGCTGCTTCTCCTTGAACACTTA 60.181 43.478 0.00 0.00 0.00 2.24
754 789 9.239002 GCTGGATATACGTAGCTAATAAATCAG 57.761 37.037 0.08 2.10 33.53 2.90
759 794 8.288689 TCATGCTGGATATACGTAGCTAATAA 57.711 34.615 0.08 0.00 37.10 1.40
769 804 2.738846 GTTGGCTCATGCTGGATATACG 59.261 50.000 0.00 0.00 39.59 3.06
770 805 3.743521 TGTTGGCTCATGCTGGATATAC 58.256 45.455 0.00 0.00 39.59 1.47
771 806 3.392285 ACTGTTGGCTCATGCTGGATATA 59.608 43.478 0.00 0.00 39.59 0.86
772 807 2.174210 ACTGTTGGCTCATGCTGGATAT 59.826 45.455 0.00 0.00 39.59 1.63
908 1588 8.731275 TTCAAATTAGTCTCACAAGTCTTCAA 57.269 30.769 0.00 0.00 0.00 2.69
981 1691 6.635755 ACCTATGAAGTGTAGAGCTTTTCTC 58.364 40.000 0.00 0.00 42.21 2.87
999 1709 6.758886 GTGAAGAACAACTGAGGATACCTATG 59.241 42.308 0.00 0.00 31.76 2.23
1029 1739 2.414465 ATTGGCCATTTGGGGTGGGT 62.414 55.000 6.09 0.00 37.22 4.51
1038 1756 3.647590 AGTGACCTTGAAATTGGCCATTT 59.352 39.130 6.09 6.67 37.84 2.32
1072 1790 2.230660 AGCTTAGTGTTTTCCAGTGCC 58.769 47.619 0.00 0.00 0.00 5.01
1123 1844 7.475299 ACTGGTTTTTCTTATCCCCAGAATTA 58.525 34.615 10.26 0.00 41.57 1.40
1125 1846 5.903923 ACTGGTTTTTCTTATCCCCAGAAT 58.096 37.500 10.26 0.00 41.57 2.40
1264 1985 0.033920 AGTCAGCAGCATTCACACGA 59.966 50.000 0.00 0.00 0.00 4.35
1268 1989 0.520404 CACCAGTCAGCAGCATTCAC 59.480 55.000 0.00 0.00 0.00 3.18
1330 2057 4.036734 AGCACATTACAGGACAAAACACAG 59.963 41.667 0.00 0.00 0.00 3.66
1365 2092 6.538021 AGACAATGTGATGCTAGCTAAAGAAG 59.462 38.462 17.23 2.67 0.00 2.85
1368 2095 6.457934 CCAAGACAATGTGATGCTAGCTAAAG 60.458 42.308 17.23 0.57 0.00 1.85
1370 2097 4.877823 CCAAGACAATGTGATGCTAGCTAA 59.122 41.667 17.23 0.00 0.00 3.09
1371 2098 4.080919 ACCAAGACAATGTGATGCTAGCTA 60.081 41.667 17.23 2.58 0.00 3.32
1372 2099 3.276857 CCAAGACAATGTGATGCTAGCT 58.723 45.455 17.23 0.83 0.00 3.32
1373 2100 3.012518 ACCAAGACAATGTGATGCTAGC 58.987 45.455 8.10 8.10 0.00 3.42
1422 2151 4.766404 AAGCGTGGATCCTTTAAAACTG 57.234 40.909 14.23 0.00 0.00 3.16
1425 2154 4.825085 ACAGAAAGCGTGGATCCTTTAAAA 59.175 37.500 14.23 0.00 31.85 1.52
1428 2157 3.695830 ACAGAAAGCGTGGATCCTTTA 57.304 42.857 14.23 0.00 31.85 1.85
1462 2191 1.815003 CCATTCACCTTGTTCCTCAGC 59.185 52.381 0.00 0.00 0.00 4.26
1503 2232 1.064296 ACGAGCCATAGCGAAGTCG 59.936 57.895 0.00 0.00 46.67 4.18
1518 2247 1.627864 TTCTCTGGATGACACCACGA 58.372 50.000 0.00 0.00 35.91 4.35
1551 2280 6.627065 GCTCTAATACATCTCCATCTGCTACC 60.627 46.154 0.00 0.00 0.00 3.18
1557 2286 9.989296 ATAGTAAGCTCTAATACATCTCCATCT 57.011 33.333 0.00 0.00 0.00 2.90
1591 2326 0.321122 CTCACCTTCCTGTGGCAGAC 60.321 60.000 0.00 0.00 36.87 3.51
1667 2418 7.861872 TGTGATCCGATATTTGCAAAATGTATG 59.138 33.333 17.19 4.42 0.00 2.39
1867 2649 3.397613 GAGGCTGAATCGGCTGGCT 62.398 63.158 14.30 2.39 43.48 4.75
1935 2717 5.017490 TGGTAAAGTTTTTCACCAGTTCCA 58.983 37.500 4.86 0.00 36.15 3.53
1998 2780 2.906354 ACAGCATAATGACGGAAGACC 58.094 47.619 0.00 0.00 0.00 3.85
2023 2805 5.695363 GGCCGATATAAGTGAAAGTAAGTCC 59.305 44.000 0.00 0.00 0.00 3.85
2065 2847 2.785713 TTACCAAAAAGTTCGCTGGC 57.214 45.000 0.00 0.00 31.74 4.85
2114 2896 6.044512 ACGAATAGTGAACAAAACTCACAC 57.955 37.500 5.81 0.00 44.68 3.82
2124 2906 5.175859 GGATGAGGAAACGAATAGTGAACA 58.824 41.667 0.00 0.00 0.00 3.18
2168 2950 4.511454 TCAATGAACAAGGACAAGAAGACG 59.489 41.667 0.00 0.00 0.00 4.18
2206 2991 4.535526 AAACCAAACCATAAGTGATGCC 57.464 40.909 0.00 0.00 33.79 4.40
2256 3041 1.073199 CAGAAACTCCGTTGGGCCT 59.927 57.895 4.53 0.00 0.00 5.19
2277 3062 0.462047 CGTATGTTCCTGACAGCCCC 60.462 60.000 0.00 0.00 42.62 5.80
2349 3134 1.338674 CCATGAGTGTTGCCGAGGTTA 60.339 52.381 0.00 0.00 0.00 2.85
2387 3172 0.466372 GCTGAAAGGGGTGCCTATCC 60.466 60.000 0.00 0.00 0.00 2.59
2412 3197 1.581934 TTCTGTTGTTCTGAGGCACG 58.418 50.000 0.00 0.00 0.00 5.34
2453 3238 2.234300 ATTGATGGCGTAACCCGTAG 57.766 50.000 0.00 0.00 39.32 3.51
2578 3363 7.718334 ATAAAACTAATAAAGCAAGGCTGGT 57.282 32.000 0.00 0.00 39.62 4.00
2628 3413 2.047061 TGGCATGGTGTAGGTAGATCC 58.953 52.381 0.00 0.00 0.00 3.36
2634 3419 0.609131 GCTTGTGGCATGGTGTAGGT 60.609 55.000 0.00 0.00 41.35 3.08
2723 3508 8.820831 TCAGGTCTTCTCTTCTTTTATTCTGAT 58.179 33.333 0.00 0.00 0.00 2.90
2788 3573 7.504238 TGCAACAAATTAGAAGGACCTTAAAGA 59.496 33.333 6.75 0.00 0.00 2.52
2792 3577 6.015772 GGTTGCAACAAATTAGAAGGACCTTA 60.016 38.462 29.55 0.00 0.00 2.69
2805 3590 4.320935 GGTGATAGTTCGGTTGCAACAAAT 60.321 41.667 29.55 17.90 0.00 2.32
2809 3594 2.147958 TGGTGATAGTTCGGTTGCAAC 58.852 47.619 21.59 21.59 0.00 4.17
2829 3614 5.198207 TGAAGGATGAGATTGCATCAACAT 58.802 37.500 0.00 0.00 45.03 2.71
2839 3624 6.888088 TCATGTCACATTTGAAGGATGAGATT 59.112 34.615 0.00 0.00 31.90 2.40
2851 3636 3.646611 TTGCCTGTCATGTCACATTTG 57.353 42.857 0.00 0.00 0.00 2.32
2853 3638 4.669206 TTTTTGCCTGTCATGTCACATT 57.331 36.364 0.00 0.00 0.00 2.71
2875 3660 5.560724 ACTAAGCACACCATGTTACTGAAT 58.439 37.500 0.00 0.00 0.00 2.57
3001 3941 1.259316 GATCAATTTGACCAACGCGC 58.741 50.000 5.73 0.00 0.00 6.86
3030 3970 4.602995 GTTTCGTTTTTATGTGTGCCAGA 58.397 39.130 0.00 0.00 0.00 3.86
3033 3973 3.178814 CACGTTTCGTTTTTATGTGTGCC 59.821 43.478 0.00 0.00 38.32 5.01
3053 3993 0.109597 CGCTGGCACTTCCATTTCAC 60.110 55.000 0.00 0.00 45.50 3.18
3055 3995 1.244019 ACCGCTGGCACTTCCATTTC 61.244 55.000 0.00 0.00 45.50 2.17
3067 4007 0.999406 CGATGAACACTAACCGCTGG 59.001 55.000 0.00 0.00 0.00 4.85
3095 4035 4.460382 CACCTCACCAGTCTTGCAAATATT 59.540 41.667 0.00 0.00 0.00 1.28
3109 4049 3.569210 CCAGCCACCACCTCACCA 61.569 66.667 0.00 0.00 0.00 4.17
3110 4050 4.351054 CCCAGCCACCACCTCACC 62.351 72.222 0.00 0.00 0.00 4.02
3143 4083 1.867233 GGTGAGTGCTATAACCATGCG 59.133 52.381 0.00 0.00 32.69 4.73
3170 4110 0.387239 GTGCGGTTGAAGCATGGAAC 60.387 55.000 0.00 0.00 46.96 3.62
3171 4111 1.523154 GGTGCGGTTGAAGCATGGAA 61.523 55.000 0.00 0.00 46.96 3.53
3172 4112 1.971167 GGTGCGGTTGAAGCATGGA 60.971 57.895 0.00 0.00 46.96 3.41
3173 4113 1.597797 ATGGTGCGGTTGAAGCATGG 61.598 55.000 0.00 0.00 46.96 3.66
3174 4114 0.244450 AATGGTGCGGTTGAAGCATG 59.756 50.000 0.00 0.00 41.07 4.06
3175 4115 1.472480 GTAATGGTGCGGTTGAAGCAT 59.528 47.619 0.00 0.00 43.86 3.79
3176 4116 0.878416 GTAATGGTGCGGTTGAAGCA 59.122 50.000 0.00 0.00 42.99 3.91
3177 4117 1.165270 AGTAATGGTGCGGTTGAAGC 58.835 50.000 0.00 0.00 0.00 3.86
3178 4118 2.936498 CCTAGTAATGGTGCGGTTGAAG 59.064 50.000 0.00 0.00 0.00 3.02
3179 4119 2.568062 TCCTAGTAATGGTGCGGTTGAA 59.432 45.455 0.00 0.00 0.00 2.69
3180 4120 2.181125 TCCTAGTAATGGTGCGGTTGA 58.819 47.619 0.00 0.00 0.00 3.18
3181 4121 2.684001 TCCTAGTAATGGTGCGGTTG 57.316 50.000 0.00 0.00 0.00 3.77
3182 4122 3.008704 AGTTTCCTAGTAATGGTGCGGTT 59.991 43.478 0.00 0.00 0.00 4.44
3183 4123 2.570302 AGTTTCCTAGTAATGGTGCGGT 59.430 45.455 0.00 0.00 0.00 5.68
3184 4124 2.936498 CAGTTTCCTAGTAATGGTGCGG 59.064 50.000 0.00 0.00 0.00 5.69
3185 4125 2.351726 GCAGTTTCCTAGTAATGGTGCG 59.648 50.000 0.00 0.00 0.00 5.34
3186 4126 3.610911 AGCAGTTTCCTAGTAATGGTGC 58.389 45.455 0.00 0.00 0.00 5.01
3192 4132 7.364408 CCACACCTATAAGCAGTTTCCTAGTAA 60.364 40.741 0.00 0.00 0.00 2.24
3208 4148 3.118555 CCACGGATTTGACCACACCTATA 60.119 47.826 0.00 0.00 0.00 1.31
3216 4156 0.841158 TACCCCCACGGATTTGACCA 60.841 55.000 0.00 0.00 34.64 4.02
3232 4172 3.657350 TGGGTTGCTGGGCCTACC 61.657 66.667 4.53 7.11 40.81 3.18
3234 4174 3.657350 GGTGGGTTGCTGGGCCTA 61.657 66.667 4.53 0.00 0.00 3.93
3238 4178 2.598394 CAGTGGTGGGTTGCTGGG 60.598 66.667 0.00 0.00 0.00 4.45
3240 4180 0.537143 TTAGCAGTGGTGGGTTGCTG 60.537 55.000 4.76 0.00 46.78 4.41
3242 4182 0.811281 GATTAGCAGTGGTGGGTTGC 59.189 55.000 4.76 0.00 38.09 4.17
3243 4183 2.086869 CAGATTAGCAGTGGTGGGTTG 58.913 52.381 4.76 0.00 0.00 3.77
3293 4234 7.562135 TGATAAAGTTATTCTAGTGGTGGTCC 58.438 38.462 0.00 0.00 0.00 4.46
3298 4239 7.226720 CGCCATTGATAAAGTTATTCTAGTGGT 59.773 37.037 0.00 0.00 0.00 4.16
3319 4260 2.185350 CGTGGAAGAGCTCGCCAT 59.815 61.111 26.91 8.96 33.66 4.40
3323 4264 1.934220 TAGGTGCGTGGAAGAGCTCG 61.934 60.000 8.37 0.00 0.00 5.03
3325 4266 1.592223 GTAGGTGCGTGGAAGAGCT 59.408 57.895 0.00 0.00 0.00 4.09
3349 4290 1.683418 CTAACCTGGGCCCGGACTAC 61.683 65.000 33.68 0.00 0.00 2.73
3361 4302 2.214376 TTTCACCCATGGCTAACCTG 57.786 50.000 6.09 0.00 36.63 4.00
3393 4334 2.033174 TGTGCGCTTATATGTGGCAATG 59.967 45.455 9.73 0.00 35.10 2.82
3402 4343 4.303086 ACTACGAGTTGTGCGCTTATAT 57.697 40.909 9.73 0.00 0.00 0.86
3403 4344 3.770263 ACTACGAGTTGTGCGCTTATA 57.230 42.857 9.73 0.00 0.00 0.98
3404 4345 2.649331 ACTACGAGTTGTGCGCTTAT 57.351 45.000 9.73 0.00 0.00 1.73
3405 4346 2.427232 AACTACGAGTTGTGCGCTTA 57.573 45.000 9.73 0.00 37.00 3.09
3406 4347 2.030540 TCTAACTACGAGTTGTGCGCTT 60.031 45.455 9.73 0.00 39.11 4.68
3407 4348 1.538512 TCTAACTACGAGTTGTGCGCT 59.461 47.619 9.73 0.00 39.11 5.92
3408 4349 1.912110 CTCTAACTACGAGTTGTGCGC 59.088 52.381 0.00 0.00 39.11 6.09
3409 4350 2.161012 TCCTCTAACTACGAGTTGTGCG 59.839 50.000 9.58 0.00 39.11 5.34
3410 4351 3.844577 TCCTCTAACTACGAGTTGTGC 57.155 47.619 9.58 0.00 39.11 4.57
3411 4352 5.117355 TGTTCCTCTAACTACGAGTTGTG 57.883 43.478 9.58 4.39 39.11 3.33
3412 4353 4.826183 ACTGTTCCTCTAACTACGAGTTGT 59.174 41.667 9.58 0.00 39.11 3.32
3413 4354 5.154932 CACTGTTCCTCTAACTACGAGTTG 58.845 45.833 9.58 0.00 39.11 3.16
3414 4355 4.217983 CCACTGTTCCTCTAACTACGAGTT 59.782 45.833 0.00 0.00 41.97 3.01
3415 4356 3.757493 CCACTGTTCCTCTAACTACGAGT 59.243 47.826 0.00 0.00 38.99 4.18
3416 4357 3.427773 GCCACTGTTCCTCTAACTACGAG 60.428 52.174 0.00 0.00 38.99 4.18
3417 4358 2.490903 GCCACTGTTCCTCTAACTACGA 59.509 50.000 0.00 0.00 38.99 3.43
3418 4359 2.230508 TGCCACTGTTCCTCTAACTACG 59.769 50.000 0.00 0.00 38.99 3.51
3419 4360 3.955650 TGCCACTGTTCCTCTAACTAC 57.044 47.619 0.00 0.00 38.99 2.73
3420 4361 3.369471 GCATGCCACTGTTCCTCTAACTA 60.369 47.826 6.36 0.00 38.99 2.24
3421 4362 2.616510 GCATGCCACTGTTCCTCTAACT 60.617 50.000 6.36 0.00 38.99 2.24
3422 4363 1.740025 GCATGCCACTGTTCCTCTAAC 59.260 52.381 6.36 0.00 38.67 2.34
3423 4364 1.340017 GGCATGCCACTGTTCCTCTAA 60.340 52.381 32.08 0.00 35.81 2.10
3424 4365 0.253044 GGCATGCCACTGTTCCTCTA 59.747 55.000 32.08 0.00 35.81 2.43
3425 4366 1.001641 GGCATGCCACTGTTCCTCT 60.002 57.895 32.08 0.00 35.81 3.69
3426 4367 2.048603 GGGCATGCCACTGTTCCTC 61.049 63.158 36.56 13.39 37.98 3.71
3427 4368 2.036256 GGGCATGCCACTGTTCCT 59.964 61.111 36.56 0.00 37.98 3.36
3428 4369 3.443045 CGGGCATGCCACTGTTCC 61.443 66.667 36.56 17.19 37.98 3.62
3429 4370 2.672996 ACGGGCATGCCACTGTTC 60.673 61.111 36.56 17.93 37.98 3.18
3430 4371 1.836999 TAGACGGGCATGCCACTGTT 61.837 55.000 36.56 19.84 37.98 3.16
3431 4372 2.244117 CTAGACGGGCATGCCACTGT 62.244 60.000 36.56 29.48 37.98 3.55
3432 4373 1.522355 CTAGACGGGCATGCCACTG 60.522 63.158 36.56 26.61 37.98 3.66
3433 4374 1.685765 TCTAGACGGGCATGCCACT 60.686 57.895 36.56 30.03 37.98 4.00
3434 4375 1.521681 GTCTAGACGGGCATGCCAC 60.522 63.158 36.56 25.49 37.98 5.01
3435 4376 1.987306 TGTCTAGACGGGCATGCCA 60.987 57.895 36.56 16.18 37.98 4.92
3436 4377 1.521681 GTGTCTAGACGGGCATGCC 60.522 63.158 29.47 29.47 0.00 4.40
3437 4378 1.521681 GGTGTCTAGACGGGCATGC 60.522 63.158 17.85 9.90 0.00 4.06
3438 4379 1.144057 GGGTGTCTAGACGGGCATG 59.856 63.158 17.85 0.00 0.00 4.06
3439 4380 1.305802 TGGGTGTCTAGACGGGCAT 60.306 57.895 17.85 0.00 0.00 4.40
3440 4381 2.118732 TGGGTGTCTAGACGGGCA 59.881 61.111 17.85 0.00 0.00 5.36
3441 4382 2.577593 GTGGGTGTCTAGACGGGC 59.422 66.667 17.85 10.29 0.00 6.13
3442 4383 2.356780 GGGTGGGTGTCTAGACGGG 61.357 68.421 17.85 0.00 0.00 5.28
3443 4384 0.976073 ATGGGTGGGTGTCTAGACGG 60.976 60.000 17.85 0.00 0.00 4.79
3444 4385 0.175760 CATGGGTGGGTGTCTAGACG 59.824 60.000 17.85 0.00 0.00 4.18
3445 4386 0.541863 CCATGGGTGGGTGTCTAGAC 59.458 60.000 16.32 16.32 42.11 2.59
3446 4387 3.006061 CCATGGGTGGGTGTCTAGA 57.994 57.895 2.85 0.00 42.11 2.43
3461 4402 6.546034 GGTCAAATTAGTAGGCATGTTACCAT 59.454 38.462 0.00 0.00 0.00 3.55
3462 4403 5.883673 GGTCAAATTAGTAGGCATGTTACCA 59.116 40.000 0.00 0.00 0.00 3.25
3463 4404 5.298527 GGGTCAAATTAGTAGGCATGTTACC 59.701 44.000 0.00 0.00 0.00 2.85
3464 4405 5.883673 TGGGTCAAATTAGTAGGCATGTTAC 59.116 40.000 0.00 0.00 0.00 2.50
3465 4406 5.883673 GTGGGTCAAATTAGTAGGCATGTTA 59.116 40.000 0.00 0.00 0.00 2.41
3466 4407 4.705023 GTGGGTCAAATTAGTAGGCATGTT 59.295 41.667 0.00 0.00 0.00 2.71
3467 4408 4.270008 GTGGGTCAAATTAGTAGGCATGT 58.730 43.478 0.00 0.00 0.00 3.21
3468 4409 3.632145 GGTGGGTCAAATTAGTAGGCATG 59.368 47.826 0.00 0.00 0.00 4.06
3469 4410 3.268334 TGGTGGGTCAAATTAGTAGGCAT 59.732 43.478 0.00 0.00 0.00 4.40
3470 4411 2.645297 TGGTGGGTCAAATTAGTAGGCA 59.355 45.455 0.00 0.00 0.00 4.75
3471 4412 3.359695 TGGTGGGTCAAATTAGTAGGC 57.640 47.619 0.00 0.00 0.00 3.93
3472 4413 5.063880 GCTATGGTGGGTCAAATTAGTAGG 58.936 45.833 0.00 0.00 0.00 3.18
3473 4414 5.063880 GGCTATGGTGGGTCAAATTAGTAG 58.936 45.833 0.00 0.00 0.00 2.57
3474 4415 4.141344 GGGCTATGGTGGGTCAAATTAGTA 60.141 45.833 0.00 0.00 0.00 1.82
3475 4416 3.372675 GGGCTATGGTGGGTCAAATTAGT 60.373 47.826 0.00 0.00 0.00 2.24
3476 4417 3.222603 GGGCTATGGTGGGTCAAATTAG 58.777 50.000 0.00 0.00 0.00 1.73
3477 4418 2.091555 GGGGCTATGGTGGGTCAAATTA 60.092 50.000 0.00 0.00 0.00 1.40
3478 4419 1.342975 GGGGCTATGGTGGGTCAAATT 60.343 52.381 0.00 0.00 0.00 1.82
3479 4420 0.261696 GGGGCTATGGTGGGTCAAAT 59.738 55.000 0.00 0.00 0.00 2.32
3480 4421 1.143329 TGGGGCTATGGTGGGTCAAA 61.143 55.000 0.00 0.00 0.00 2.69
3481 4422 1.143329 TTGGGGCTATGGTGGGTCAA 61.143 55.000 0.00 0.00 0.00 3.18
3482 4423 1.542628 TTGGGGCTATGGTGGGTCA 60.543 57.895 0.00 0.00 0.00 4.02
3483 4424 1.227383 CTTGGGGCTATGGTGGGTC 59.773 63.158 0.00 0.00 0.00 4.46
3484 4425 0.627469 ATCTTGGGGCTATGGTGGGT 60.627 55.000 0.00 0.00 0.00 4.51
3485 4426 1.073923 GTATCTTGGGGCTATGGTGGG 59.926 57.143 0.00 0.00 0.00 4.61
3486 4427 1.270839 CGTATCTTGGGGCTATGGTGG 60.271 57.143 0.00 0.00 0.00 4.61
3487 4428 1.416401 ACGTATCTTGGGGCTATGGTG 59.584 52.381 0.00 0.00 0.00 4.17
3488 4429 1.802553 ACGTATCTTGGGGCTATGGT 58.197 50.000 0.00 0.00 0.00 3.55
3489 4430 2.897969 AGTACGTATCTTGGGGCTATGG 59.102 50.000 0.00 0.00 0.00 2.74
3490 4431 3.056749 GGAGTACGTATCTTGGGGCTATG 60.057 52.174 0.00 0.00 0.00 2.23
3491 4432 3.163467 GGAGTACGTATCTTGGGGCTAT 58.837 50.000 0.00 0.00 0.00 2.97
3492 4433 2.590821 GGAGTACGTATCTTGGGGCTA 58.409 52.381 0.00 0.00 0.00 3.93
3493 4434 1.411041 GGAGTACGTATCTTGGGGCT 58.589 55.000 0.00 0.00 0.00 5.19
3494 4435 0.391966 GGGAGTACGTATCTTGGGGC 59.608 60.000 0.00 0.00 0.00 5.80
3495 4436 1.962100 GAGGGAGTACGTATCTTGGGG 59.038 57.143 0.00 0.00 0.00 4.96
3496 4437 1.962100 GGAGGGAGTACGTATCTTGGG 59.038 57.143 0.00 0.00 0.00 4.12
3497 4438 1.607628 CGGAGGGAGTACGTATCTTGG 59.392 57.143 0.00 0.00 0.00 3.61
3498 4439 2.569059 TCGGAGGGAGTACGTATCTTG 58.431 52.381 0.00 0.00 0.00 3.02
3499 4440 3.410508 GATCGGAGGGAGTACGTATCTT 58.589 50.000 0.00 0.00 0.00 2.40
3500 4441 2.290197 GGATCGGAGGGAGTACGTATCT 60.290 54.545 0.00 0.00 0.00 1.98
3501 4442 2.083002 GGATCGGAGGGAGTACGTATC 58.917 57.143 0.00 0.00 0.00 2.24
3502 4443 1.422781 TGGATCGGAGGGAGTACGTAT 59.577 52.381 0.00 0.00 0.00 3.06
3503 4444 0.839277 TGGATCGGAGGGAGTACGTA 59.161 55.000 0.00 0.00 0.00 3.57
3504 4445 0.185416 ATGGATCGGAGGGAGTACGT 59.815 55.000 0.00 0.00 0.00 3.57
3505 4446 2.195741 TATGGATCGGAGGGAGTACG 57.804 55.000 0.00 0.00 0.00 3.67
3506 4447 6.793505 ATTAATATGGATCGGAGGGAGTAC 57.206 41.667 0.00 0.00 0.00 2.73
3507 4448 6.729100 ACAATTAATATGGATCGGAGGGAGTA 59.271 38.462 0.00 0.00 0.00 2.59
3508 4449 5.548056 ACAATTAATATGGATCGGAGGGAGT 59.452 40.000 0.00 0.00 0.00 3.85
3509 4450 6.054860 ACAATTAATATGGATCGGAGGGAG 57.945 41.667 0.00 0.00 0.00 4.30
3510 4451 7.749377 ATACAATTAATATGGATCGGAGGGA 57.251 36.000 0.00 0.00 0.00 4.20
3511 4452 8.705594 ACTATACAATTAATATGGATCGGAGGG 58.294 37.037 0.00 0.00 0.00 4.30
3512 4453 9.534565 CACTATACAATTAATATGGATCGGAGG 57.465 37.037 0.00 0.00 0.00 4.30
3513 4454 9.534565 CCACTATACAATTAATATGGATCGGAG 57.465 37.037 0.00 0.00 0.00 4.63
3514 4455 9.262240 TCCACTATACAATTAATATGGATCGGA 57.738 33.333 0.00 0.00 30.08 4.55
3515 4456 9.884636 TTCCACTATACAATTAATATGGATCGG 57.115 33.333 0.00 0.00 35.03 4.18
3529 4470 9.621629 CATTTGGTATAAGGTTCCACTATACAA 57.378 33.333 16.04 7.95 0.00 2.41
3530 4471 8.994500 TCATTTGGTATAAGGTTCCACTATACA 58.006 33.333 16.04 6.45 0.00 2.29
3531 4472 9.490379 CTCATTTGGTATAAGGTTCCACTATAC 57.510 37.037 10.24 10.24 0.00 1.47
3532 4473 9.220906 ACTCATTTGGTATAAGGTTCCACTATA 57.779 33.333 0.00 0.00 0.00 1.31
3533 4474 7.993183 CACTCATTTGGTATAAGGTTCCACTAT 59.007 37.037 0.00 0.00 0.00 2.12
3534 4475 7.181305 TCACTCATTTGGTATAAGGTTCCACTA 59.819 37.037 0.00 0.00 0.00 2.74
3535 4476 6.012858 TCACTCATTTGGTATAAGGTTCCACT 60.013 38.462 0.00 0.00 0.00 4.00
3536 4477 6.177610 TCACTCATTTGGTATAAGGTTCCAC 58.822 40.000 0.00 0.00 0.00 4.02
3537 4478 6.214615 TCTCACTCATTTGGTATAAGGTTCCA 59.785 38.462 0.00 0.00 0.00 3.53
3538 4479 6.650120 TCTCACTCATTTGGTATAAGGTTCC 58.350 40.000 0.00 0.00 0.00 3.62
3539 4480 8.738645 ATTCTCACTCATTTGGTATAAGGTTC 57.261 34.615 0.00 0.00 0.00 3.62
3548 4489 9.479549 ACCAATATTAATTCTCACTCATTTGGT 57.520 29.630 0.00 0.00 0.00 3.67
3549 4490 9.740239 CACCAATATTAATTCTCACTCATTTGG 57.260 33.333 0.00 0.00 0.00 3.28
3553 4494 9.775854 CTCTCACCAATATTAATTCTCACTCAT 57.224 33.333 0.00 0.00 0.00 2.90
3554 4495 8.206867 CCTCTCACCAATATTAATTCTCACTCA 58.793 37.037 0.00 0.00 0.00 3.41
3555 4496 8.207545 ACCTCTCACCAATATTAATTCTCACTC 58.792 37.037 0.00 0.00 0.00 3.51
3556 4497 8.095452 ACCTCTCACCAATATTAATTCTCACT 57.905 34.615 0.00 0.00 0.00 3.41
3557 4498 9.482627 CTACCTCTCACCAATATTAATTCTCAC 57.517 37.037 0.00 0.00 0.00 3.51
3558 4499 9.434275 TCTACCTCTCACCAATATTAATTCTCA 57.566 33.333 0.00 0.00 0.00 3.27
3566 4507 8.971073 CCAAAATTTCTACCTCTCACCAATATT 58.029 33.333 0.00 0.00 0.00 1.28
3567 4508 8.116026 ACCAAAATTTCTACCTCTCACCAATAT 58.884 33.333 0.00 0.00 0.00 1.28
3568 4509 7.466804 ACCAAAATTTCTACCTCTCACCAATA 58.533 34.615 0.00 0.00 0.00 1.90
3569 4510 6.314917 ACCAAAATTTCTACCTCTCACCAAT 58.685 36.000 0.00 0.00 0.00 3.16
3570 4511 5.701224 ACCAAAATTTCTACCTCTCACCAA 58.299 37.500 0.00 0.00 0.00 3.67
3571 4512 5.319043 ACCAAAATTTCTACCTCTCACCA 57.681 39.130 0.00 0.00 0.00 4.17
3572 4513 6.650427 AAACCAAAATTTCTACCTCTCACC 57.350 37.500 0.00 0.00 0.00 4.02
3573 4514 7.941919 AGAAAACCAAAATTTCTACCTCTCAC 58.058 34.615 0.00 0.00 43.43 3.51
3611 4552 9.706691 TGGTCAAACAAAAATAACACAGTAAAA 57.293 25.926 0.00 0.00 0.00 1.52
3612 4553 9.877178 ATGGTCAAACAAAAATAACACAGTAAA 57.123 25.926 0.00 0.00 0.00 2.01
3613 4554 9.877178 AATGGTCAAACAAAAATAACACAGTAA 57.123 25.926 0.00 0.00 0.00 2.24
3614 4555 9.307121 CAATGGTCAAACAAAAATAACACAGTA 57.693 29.630 0.00 0.00 0.00 2.74
3615 4556 7.821846 ACAATGGTCAAACAAAAATAACACAGT 59.178 29.630 0.00 0.00 0.00 3.55
3616 4557 8.195617 ACAATGGTCAAACAAAAATAACACAG 57.804 30.769 0.00 0.00 0.00 3.66
3617 4558 9.307121 CTACAATGGTCAAACAAAAATAACACA 57.693 29.630 0.00 0.00 0.00 3.72
3618 4559 9.308318 ACTACAATGGTCAAACAAAAATAACAC 57.692 29.630 0.00 0.00 0.00 3.32
3619 4560 9.877178 AACTACAATGGTCAAACAAAAATAACA 57.123 25.926 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.