Multiple sequence alignment - TraesCS7D01G207000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G207000 chr7D 100.000 2492 0 0 1 2492 164535966 164533475 0.000000e+00 4602.0
1 TraesCS7D01G207000 chr7D 89.126 469 49 2 2026 2492 164484952 164484484 1.280000e-162 582.0
2 TraesCS7D01G207000 chr7A 93.697 1523 51 19 374 1883 165936189 165937679 0.000000e+00 2239.0
3 TraesCS7D01G207000 chr7A 77.542 472 82 20 2028 2492 25425704 25425250 1.900000e-66 263.0
4 TraesCS7D01G207000 chr7A 75.424 472 92 21 2028 2492 25484853 25484399 9.030000e-50 207.0
5 TraesCS7D01G207000 chr7A 91.667 48 2 2 1967 2014 199002349 199002304 5.750000e-07 65.8
6 TraesCS7D01G207000 chr7B 91.894 1246 46 23 601 1821 126834168 126832953 0.000000e+00 1690.0
7 TraesCS7D01G207000 chr7B 82.719 434 37 19 156 581 126839853 126839450 3.940000e-93 351.0
8 TraesCS7D01G207000 chr5D 91.342 462 35 5 2033 2491 477841115 477840656 5.850000e-176 627.0
9 TraesCS7D01G207000 chr5D 90.021 481 46 2 2014 2492 6508736 6509216 2.720000e-174 621.0
10 TraesCS7D01G207000 chr5D 89.362 470 46 4 2025 2492 394843507 394843974 2.760000e-164 588.0
11 TraesCS7D01G207000 chr1D 90.192 469 43 3 2026 2492 491944739 491945206 2.120000e-170 608.0
12 TraesCS7D01G207000 chr1D 89.744 468 43 5 2027 2492 359604612 359605076 5.930000e-166 593.0
13 TraesCS7D01G207000 chr1D 75.000 468 92 21 2033 2492 454774296 454773846 2.530000e-45 193.0
14 TraesCS7D01G207000 chr6D 90.171 468 41 5 2027 2492 68685420 68685884 2.740000e-169 604.0
15 TraesCS7D01G207000 chr6D 89.574 470 43 6 2026 2492 8169284 8168818 2.130000e-165 592.0
16 TraesCS7D01G207000 chr6D 82.398 392 44 12 1021 1398 385560036 385560416 4.000000e-83 318.0
17 TraesCS7D01G207000 chr2D 89.293 467 48 2 2027 2492 526520862 526521327 3.570000e-163 584.0
18 TraesCS7D01G207000 chr6A 83.544 395 37 16 1021 1398 530045832 530046215 6.600000e-91 344.0
19 TraesCS7D01G207000 chr6B 83.558 371 35 13 1021 1375 575638335 575638695 8.600000e-85 324.0
20 TraesCS7D01G207000 chr2A 76.282 468 85 21 2033 2492 740088673 740089122 2.490000e-55 226.0
21 TraesCS7D01G207000 chrUn 97.059 34 1 0 1978 2011 214038593 214038626 9.630000e-05 58.4
22 TraesCS7D01G207000 chrUn 97.059 34 1 0 1978 2011 240306492 240306459 9.630000e-05 58.4
23 TraesCS7D01G207000 chr3D 97.059 34 1 0 1976 2009 43563935 43563902 9.630000e-05 58.4
24 TraesCS7D01G207000 chr1B 97.059 34 1 0 1978 2011 583456073 583456040 9.630000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G207000 chr7D 164533475 164535966 2491 True 4602 4602 100.000 1 2492 1 chr7D.!!$R2 2491
1 TraesCS7D01G207000 chr7A 165936189 165937679 1490 False 2239 2239 93.697 374 1883 1 chr7A.!!$F1 1509
2 TraesCS7D01G207000 chr7B 126832953 126834168 1215 True 1690 1690 91.894 601 1821 1 chr7B.!!$R1 1220

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
346 347 0.321671 CCTTCTCCTTCGGCTGAACA 59.678 55.0 3.13 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2133 2168 0.031994 CCAAGCGTGTTTTCCCCTTG 59.968 55.0 0.0 0.0 34.26 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.932545 ACTGCGCAAAATCCACAATAA 57.067 38.095 13.05 0.00 0.00 1.40
21 22 3.574614 ACTGCGCAAAATCCACAATAAC 58.425 40.909 13.05 0.00 0.00 1.89
22 23 3.005261 ACTGCGCAAAATCCACAATAACA 59.995 39.130 13.05 0.00 0.00 2.41
23 24 4.175516 CTGCGCAAAATCCACAATAACAT 58.824 39.130 13.05 0.00 0.00 2.71
24 25 4.172505 TGCGCAAAATCCACAATAACATC 58.827 39.130 8.16 0.00 0.00 3.06
25 26 4.082300 TGCGCAAAATCCACAATAACATCT 60.082 37.500 8.16 0.00 0.00 2.90
26 27 4.864247 GCGCAAAATCCACAATAACATCTT 59.136 37.500 0.30 0.00 0.00 2.40
27 28 5.348451 GCGCAAAATCCACAATAACATCTTT 59.652 36.000 0.30 0.00 0.00 2.52
28 29 6.128580 GCGCAAAATCCACAATAACATCTTTT 60.129 34.615 0.30 0.00 0.00 2.27
29 30 7.571059 GCGCAAAATCCACAATAACATCTTTTT 60.571 33.333 0.30 0.00 0.00 1.94
59 60 5.523438 GAGTATCTTCCTAGTCCACCTTG 57.477 47.826 0.00 0.00 0.00 3.61
60 61 4.949121 AGTATCTTCCTAGTCCACCTTGT 58.051 43.478 0.00 0.00 0.00 3.16
61 62 4.712337 AGTATCTTCCTAGTCCACCTTGTG 59.288 45.833 0.00 0.00 0.00 3.33
62 63 3.254093 TCTTCCTAGTCCACCTTGTGA 57.746 47.619 0.00 0.00 35.23 3.58
63 64 3.583228 TCTTCCTAGTCCACCTTGTGAA 58.417 45.455 0.00 0.00 35.23 3.18
64 65 3.323979 TCTTCCTAGTCCACCTTGTGAAC 59.676 47.826 0.00 0.00 35.23 3.18
65 66 1.616865 TCCTAGTCCACCTTGTGAACG 59.383 52.381 0.00 0.00 35.23 3.95
66 67 1.343465 CCTAGTCCACCTTGTGAACGT 59.657 52.381 0.00 0.00 35.23 3.99
67 68 2.609737 CCTAGTCCACCTTGTGAACGTC 60.610 54.545 0.00 0.00 35.23 4.34
68 69 1.120530 AGTCCACCTTGTGAACGTCT 58.879 50.000 0.00 0.00 35.23 4.18
69 70 1.485066 AGTCCACCTTGTGAACGTCTT 59.515 47.619 0.00 0.00 35.23 3.01
70 71 2.696707 AGTCCACCTTGTGAACGTCTTA 59.303 45.455 0.00 0.00 35.23 2.10
71 72 3.057734 GTCCACCTTGTGAACGTCTTAG 58.942 50.000 0.00 0.00 35.23 2.18
72 73 2.036733 TCCACCTTGTGAACGTCTTAGG 59.963 50.000 0.00 0.00 35.23 2.69
73 74 2.224209 CCACCTTGTGAACGTCTTAGGT 60.224 50.000 0.00 0.00 35.23 3.08
74 75 3.057734 CACCTTGTGAACGTCTTAGGTC 58.942 50.000 0.00 0.00 35.23 3.85
75 76 2.963782 ACCTTGTGAACGTCTTAGGTCT 59.036 45.455 0.00 0.00 30.42 3.85
76 77 3.387050 ACCTTGTGAACGTCTTAGGTCTT 59.613 43.478 0.00 0.00 30.42 3.01
77 78 4.141779 ACCTTGTGAACGTCTTAGGTCTTT 60.142 41.667 0.00 0.00 30.42 2.52
78 79 5.069516 ACCTTGTGAACGTCTTAGGTCTTTA 59.930 40.000 0.00 0.00 30.42 1.85
79 80 5.987347 CCTTGTGAACGTCTTAGGTCTTTAA 59.013 40.000 0.00 0.00 0.00 1.52
80 81 6.145696 CCTTGTGAACGTCTTAGGTCTTTAAG 59.854 42.308 0.00 0.00 32.99 1.85
81 82 6.152932 TGTGAACGTCTTAGGTCTTTAAGT 57.847 37.500 0.00 0.00 33.38 2.24
82 83 7.275888 TGTGAACGTCTTAGGTCTTTAAGTA 57.724 36.000 0.00 0.00 33.38 2.24
83 84 7.889469 TGTGAACGTCTTAGGTCTTTAAGTAT 58.111 34.615 0.00 0.00 33.38 2.12
84 85 9.013229 TGTGAACGTCTTAGGTCTTTAAGTATA 57.987 33.333 0.00 0.00 33.38 1.47
117 118 8.432110 AAAAAGTTTAATCAACAACCATGGAC 57.568 30.769 21.47 0.63 37.93 4.02
118 119 6.976934 AAGTTTAATCAACAACCATGGACT 57.023 33.333 21.47 3.37 37.93 3.85
119 120 6.575162 AGTTTAATCAACAACCATGGACTC 57.425 37.500 21.47 0.00 37.93 3.36
120 121 6.068010 AGTTTAATCAACAACCATGGACTCA 58.932 36.000 21.47 0.00 37.93 3.41
121 122 6.721208 AGTTTAATCAACAACCATGGACTCAT 59.279 34.615 21.47 0.00 37.93 2.90
122 123 7.888021 AGTTTAATCAACAACCATGGACTCATA 59.112 33.333 21.47 0.00 37.93 2.15
123 124 7.864108 TTAATCAACAACCATGGACTCATAG 57.136 36.000 21.47 1.88 31.33 2.23
124 125 3.609853 TCAACAACCATGGACTCATAGC 58.390 45.455 21.47 0.00 31.33 2.97
125 126 3.008923 TCAACAACCATGGACTCATAGCA 59.991 43.478 21.47 0.00 31.33 3.49
126 127 3.939740 ACAACCATGGACTCATAGCAT 57.060 42.857 21.47 0.00 31.33 3.79
127 128 4.240881 ACAACCATGGACTCATAGCATT 57.759 40.909 21.47 0.00 31.33 3.56
128 129 4.202441 ACAACCATGGACTCATAGCATTC 58.798 43.478 21.47 0.00 31.33 2.67
129 130 3.498774 ACCATGGACTCATAGCATTCC 57.501 47.619 21.47 0.00 31.33 3.01
130 131 2.107204 ACCATGGACTCATAGCATTCCC 59.893 50.000 21.47 0.00 31.33 3.97
131 132 2.107031 CCATGGACTCATAGCATTCCCA 59.893 50.000 5.56 0.00 31.33 4.37
132 133 3.245158 CCATGGACTCATAGCATTCCCAT 60.245 47.826 5.56 0.00 33.61 4.00
133 134 3.497103 TGGACTCATAGCATTCCCATG 57.503 47.619 0.00 0.00 0.00 3.66
134 135 2.779430 TGGACTCATAGCATTCCCATGT 59.221 45.455 0.00 0.00 32.28 3.21
135 136 3.973305 TGGACTCATAGCATTCCCATGTA 59.027 43.478 0.00 0.00 32.28 2.29
136 137 4.411869 TGGACTCATAGCATTCCCATGTAA 59.588 41.667 0.00 0.00 32.28 2.41
137 138 5.073554 TGGACTCATAGCATTCCCATGTAAT 59.926 40.000 0.00 0.00 32.28 1.89
138 139 6.006449 GGACTCATAGCATTCCCATGTAATT 58.994 40.000 0.00 0.00 32.28 1.40
139 140 6.491403 GGACTCATAGCATTCCCATGTAATTT 59.509 38.462 0.00 0.00 32.28 1.82
140 141 7.281040 ACTCATAGCATTCCCATGTAATTTG 57.719 36.000 0.00 0.00 32.28 2.32
141 142 7.062322 ACTCATAGCATTCCCATGTAATTTGA 58.938 34.615 0.00 0.00 32.28 2.69
142 143 7.727186 ACTCATAGCATTCCCATGTAATTTGAT 59.273 33.333 0.00 0.00 32.28 2.57
143 144 7.888424 TCATAGCATTCCCATGTAATTTGATG 58.112 34.615 0.00 0.00 32.28 3.07
144 145 4.952460 AGCATTCCCATGTAATTTGATGC 58.048 39.130 0.00 0.00 32.28 3.91
145 146 4.060205 GCATTCCCATGTAATTTGATGCC 58.940 43.478 0.00 0.00 32.28 4.40
146 147 4.634199 CATTCCCATGTAATTTGATGCCC 58.366 43.478 0.00 0.00 0.00 5.36
147 148 2.676748 TCCCATGTAATTTGATGCCCC 58.323 47.619 0.00 0.00 0.00 5.80
148 149 2.247111 TCCCATGTAATTTGATGCCCCT 59.753 45.455 0.00 0.00 0.00 4.79
149 150 3.040477 CCCATGTAATTTGATGCCCCTT 58.960 45.455 0.00 0.00 0.00 3.95
150 151 3.455543 CCCATGTAATTTGATGCCCCTTT 59.544 43.478 0.00 0.00 0.00 3.11
151 152 4.443315 CCCATGTAATTTGATGCCCCTTTC 60.443 45.833 0.00 0.00 0.00 2.62
152 153 4.406649 CCATGTAATTTGATGCCCCTTTCT 59.593 41.667 0.00 0.00 0.00 2.52
153 154 5.598005 CCATGTAATTTGATGCCCCTTTCTA 59.402 40.000 0.00 0.00 0.00 2.10
154 155 6.461509 CCATGTAATTTGATGCCCCTTTCTAC 60.462 42.308 0.00 0.00 0.00 2.59
155 156 5.575157 TGTAATTTGATGCCCCTTTCTACA 58.425 37.500 0.00 0.00 0.00 2.74
156 157 6.013379 TGTAATTTGATGCCCCTTTCTACAA 58.987 36.000 0.00 0.00 0.00 2.41
157 158 6.495181 TGTAATTTGATGCCCCTTTCTACAAA 59.505 34.615 0.00 0.00 0.00 2.83
158 159 4.864704 TTTGATGCCCCTTTCTACAAAC 57.135 40.909 0.00 0.00 0.00 2.93
159 160 2.802719 TGATGCCCCTTTCTACAAACC 58.197 47.619 0.00 0.00 0.00 3.27
160 161 2.378547 TGATGCCCCTTTCTACAAACCT 59.621 45.455 0.00 0.00 0.00 3.50
161 162 3.181423 TGATGCCCCTTTCTACAAACCTT 60.181 43.478 0.00 0.00 0.00 3.50
162 163 3.322191 TGCCCCTTTCTACAAACCTTT 57.678 42.857 0.00 0.00 0.00 3.11
163 164 3.648739 TGCCCCTTTCTACAAACCTTTT 58.351 40.909 0.00 0.00 0.00 2.27
164 165 3.639561 TGCCCCTTTCTACAAACCTTTTC 59.360 43.478 0.00 0.00 0.00 2.29
165 166 3.639561 GCCCCTTTCTACAAACCTTTTCA 59.360 43.478 0.00 0.00 0.00 2.69
166 167 4.283467 GCCCCTTTCTACAAACCTTTTCAT 59.717 41.667 0.00 0.00 0.00 2.57
167 168 5.783111 CCCCTTTCTACAAACCTTTTCATG 58.217 41.667 0.00 0.00 0.00 3.07
168 169 5.279456 CCCCTTTCTACAAACCTTTTCATGG 60.279 44.000 0.00 0.00 0.00 3.66
169 170 5.230182 CCTTTCTACAAACCTTTTCATGGC 58.770 41.667 0.00 0.00 0.00 4.40
170 171 5.221422 CCTTTCTACAAACCTTTTCATGGCA 60.221 40.000 0.00 0.00 0.00 4.92
171 172 5.860941 TTCTACAAACCTTTTCATGGCAA 57.139 34.783 0.00 0.00 0.00 4.52
172 173 5.452078 TCTACAAACCTTTTCATGGCAAG 57.548 39.130 0.00 0.00 0.00 4.01
173 174 5.136828 TCTACAAACCTTTTCATGGCAAGA 58.863 37.500 0.00 0.00 0.00 3.02
174 175 4.961438 ACAAACCTTTTCATGGCAAGAT 57.039 36.364 0.00 0.00 0.00 2.40
175 176 6.945435 TCTACAAACCTTTTCATGGCAAGATA 59.055 34.615 0.00 0.00 0.00 1.98
176 177 6.610075 ACAAACCTTTTCATGGCAAGATAT 57.390 33.333 0.00 0.00 0.00 1.63
177 178 7.008021 ACAAACCTTTTCATGGCAAGATATT 57.992 32.000 0.00 0.00 0.00 1.28
178 179 7.452562 ACAAACCTTTTCATGGCAAGATATTT 58.547 30.769 0.00 2.83 0.00 1.40
179 180 7.603784 ACAAACCTTTTCATGGCAAGATATTTC 59.396 33.333 0.00 0.00 0.00 2.17
180 181 7.486407 AACCTTTTCATGGCAAGATATTTCT 57.514 32.000 0.00 0.00 0.00 2.52
181 182 8.593945 AACCTTTTCATGGCAAGATATTTCTA 57.406 30.769 0.00 0.00 0.00 2.10
182 183 8.230472 ACCTTTTCATGGCAAGATATTTCTAG 57.770 34.615 0.00 0.00 0.00 2.43
183 184 8.055181 ACCTTTTCATGGCAAGATATTTCTAGA 58.945 33.333 0.00 0.00 0.00 2.43
184 185 8.906867 CCTTTTCATGGCAAGATATTTCTAGAA 58.093 33.333 0.00 0.00 0.00 2.10
187 188 7.807977 TCATGGCAAGATATTTCTAGAAACC 57.192 36.000 19.94 14.44 32.51 3.27
188 189 7.577303 TCATGGCAAGATATTTCTAGAAACCT 58.423 34.615 19.94 13.84 32.51 3.50
189 190 8.055181 TCATGGCAAGATATTTCTAGAAACCTT 58.945 33.333 19.94 18.14 32.51 3.50
190 191 8.689972 CATGGCAAGATATTTCTAGAAACCTTT 58.310 33.333 19.94 7.14 32.51 3.11
191 192 8.650143 TGGCAAGATATTTCTAGAAACCTTTT 57.350 30.769 19.94 9.86 32.51 2.27
192 193 9.088987 TGGCAAGATATTTCTAGAAACCTTTTT 57.911 29.630 19.94 6.06 32.51 1.94
193 194 9.574458 GGCAAGATATTTCTAGAAACCTTTTTC 57.426 33.333 19.94 8.99 41.44 2.29
201 202 9.971922 ATTTCTAGAAACCTTTTTCATGTCAAG 57.028 29.630 19.94 0.00 43.29 3.02
202 203 7.510549 TCTAGAAACCTTTTTCATGTCAAGG 57.489 36.000 14.86 14.86 43.29 3.61
203 204 7.287061 TCTAGAAACCTTTTTCATGTCAAGGA 58.713 34.615 20.36 4.08 43.29 3.36
204 205 6.983906 AGAAACCTTTTTCATGTCAAGGAT 57.016 33.333 20.36 10.60 43.29 3.24
205 206 6.986250 AGAAACCTTTTTCATGTCAAGGATC 58.014 36.000 20.36 17.23 43.29 3.36
206 207 6.550854 AGAAACCTTTTTCATGTCAAGGATCA 59.449 34.615 20.36 0.00 43.29 2.92
207 208 5.972107 ACCTTTTTCATGTCAAGGATCAG 57.028 39.130 20.36 0.16 39.73 2.90
208 209 4.219288 ACCTTTTTCATGTCAAGGATCAGC 59.781 41.667 20.36 0.00 39.73 4.26
209 210 4.461781 CCTTTTTCATGTCAAGGATCAGCT 59.538 41.667 12.39 0.00 39.73 4.24
210 211 5.381174 TTTTTCATGTCAAGGATCAGCTG 57.619 39.130 7.63 7.63 0.00 4.24
211 212 3.986996 TTCATGTCAAGGATCAGCTGA 57.013 42.857 20.79 20.79 0.00 4.26
212 213 3.986996 TCATGTCAAGGATCAGCTGAA 57.013 42.857 22.50 4.23 0.00 3.02
213 214 3.603532 TCATGTCAAGGATCAGCTGAAC 58.396 45.455 22.50 18.57 0.00 3.18
214 215 3.008266 TCATGTCAAGGATCAGCTGAACA 59.992 43.478 22.50 19.09 0.00 3.18
215 216 3.708403 TGTCAAGGATCAGCTGAACAT 57.292 42.857 22.50 13.64 0.00 2.71
216 217 3.340928 TGTCAAGGATCAGCTGAACATG 58.659 45.455 22.50 19.38 0.00 3.21
217 218 3.008266 TGTCAAGGATCAGCTGAACATGA 59.992 43.478 22.50 21.22 0.00 3.07
218 219 4.005650 GTCAAGGATCAGCTGAACATGAA 58.994 43.478 22.50 4.82 0.00 2.57
219 220 4.456911 GTCAAGGATCAGCTGAACATGAAA 59.543 41.667 22.50 2.19 0.00 2.69
220 221 5.048504 GTCAAGGATCAGCTGAACATGAAAA 60.049 40.000 22.50 3.05 0.00 2.29
221 222 5.182570 TCAAGGATCAGCTGAACATGAAAAG 59.817 40.000 22.50 4.93 0.00 2.27
222 223 4.914983 AGGATCAGCTGAACATGAAAAGA 58.085 39.130 22.50 0.00 0.00 2.52
223 224 4.699257 AGGATCAGCTGAACATGAAAAGAC 59.301 41.667 22.50 1.77 0.00 3.01
224 225 4.142513 GGATCAGCTGAACATGAAAAGACC 60.143 45.833 22.50 6.16 0.00 3.85
225 226 4.090761 TCAGCTGAACATGAAAAGACCT 57.909 40.909 15.67 0.00 0.00 3.85
226 227 3.817084 TCAGCTGAACATGAAAAGACCTG 59.183 43.478 15.67 0.00 0.00 4.00
227 228 3.817084 CAGCTGAACATGAAAAGACCTGA 59.183 43.478 8.42 0.00 0.00 3.86
228 229 4.276678 CAGCTGAACATGAAAAGACCTGAA 59.723 41.667 8.42 0.00 0.00 3.02
229 230 4.889409 AGCTGAACATGAAAAGACCTGAAA 59.111 37.500 0.00 0.00 0.00 2.69
230 231 5.009410 AGCTGAACATGAAAAGACCTGAAAG 59.991 40.000 0.00 0.00 0.00 2.62
245 246 4.696479 CTGAAAGGTATGGAGGCATAGT 57.304 45.455 0.00 0.00 0.00 2.12
246 247 5.041191 CTGAAAGGTATGGAGGCATAGTT 57.959 43.478 0.00 0.00 0.00 2.24
247 248 5.440610 CTGAAAGGTATGGAGGCATAGTTT 58.559 41.667 0.00 0.00 0.00 2.66
248 249 5.437060 TGAAAGGTATGGAGGCATAGTTTC 58.563 41.667 0.00 0.00 0.00 2.78
249 250 5.045213 TGAAAGGTATGGAGGCATAGTTTCA 60.045 40.000 0.43 0.43 33.41 2.69
250 251 5.450818 AAGGTATGGAGGCATAGTTTCAA 57.549 39.130 0.00 0.00 0.00 2.69
251 252 4.781934 AGGTATGGAGGCATAGTTTCAAC 58.218 43.478 0.00 0.00 0.00 3.18
252 253 4.475016 AGGTATGGAGGCATAGTTTCAACT 59.525 41.667 0.00 0.00 42.91 3.16
253 254 4.816925 GGTATGGAGGCATAGTTTCAACTC 59.183 45.833 0.00 0.00 40.37 3.01
254 255 4.851639 ATGGAGGCATAGTTTCAACTCT 57.148 40.909 0.00 0.00 40.37 3.24
255 256 4.207891 TGGAGGCATAGTTTCAACTCTC 57.792 45.455 0.00 0.00 40.37 3.20
256 257 3.582647 TGGAGGCATAGTTTCAACTCTCA 59.417 43.478 0.00 0.00 40.37 3.27
257 258 4.041567 TGGAGGCATAGTTTCAACTCTCAA 59.958 41.667 0.00 0.00 40.37 3.02
258 259 4.633565 GGAGGCATAGTTTCAACTCTCAAG 59.366 45.833 0.00 0.00 40.37 3.02
259 260 4.583871 AGGCATAGTTTCAACTCTCAAGG 58.416 43.478 0.00 0.00 40.37 3.61
260 261 3.127721 GGCATAGTTTCAACTCTCAAGGC 59.872 47.826 0.00 0.00 40.37 4.35
261 262 3.127721 GCATAGTTTCAACTCTCAAGGCC 59.872 47.826 0.00 0.00 40.37 5.19
262 263 4.583871 CATAGTTTCAACTCTCAAGGCCT 58.416 43.478 0.00 0.00 40.37 5.19
263 264 3.133141 AGTTTCAACTCTCAAGGCCTC 57.867 47.619 5.23 0.00 32.86 4.70
264 265 2.708325 AGTTTCAACTCTCAAGGCCTCT 59.292 45.455 5.23 0.00 32.86 3.69
265 266 3.137360 AGTTTCAACTCTCAAGGCCTCTT 59.863 43.478 5.23 0.00 32.86 2.85
266 267 3.864789 TTCAACTCTCAAGGCCTCTTT 57.135 42.857 5.23 0.00 0.00 2.52
267 268 3.864789 TCAACTCTCAAGGCCTCTTTT 57.135 42.857 5.23 0.00 0.00 2.27
268 269 3.744660 TCAACTCTCAAGGCCTCTTTTC 58.255 45.455 5.23 0.00 0.00 2.29
269 270 3.392616 TCAACTCTCAAGGCCTCTTTTCT 59.607 43.478 5.23 0.00 0.00 2.52
270 271 4.593206 TCAACTCTCAAGGCCTCTTTTCTA 59.407 41.667 5.23 0.00 0.00 2.10
271 272 4.817318 ACTCTCAAGGCCTCTTTTCTAG 57.183 45.455 5.23 0.00 0.00 2.43
272 273 3.517500 ACTCTCAAGGCCTCTTTTCTAGG 59.482 47.826 5.23 0.00 37.17 3.02
273 274 2.840651 TCTCAAGGCCTCTTTTCTAGGG 59.159 50.000 5.23 0.00 34.46 3.53
280 281 3.356290 GCCTCTTTTCTAGGGCAATTCA 58.644 45.455 0.00 0.00 39.00 2.57
281 282 3.379688 GCCTCTTTTCTAGGGCAATTCAG 59.620 47.826 0.00 0.00 39.00 3.02
282 283 3.379688 CCTCTTTTCTAGGGCAATTCAGC 59.620 47.826 0.00 0.00 0.00 4.26
283 284 4.268359 CTCTTTTCTAGGGCAATTCAGCT 58.732 43.478 0.00 0.00 34.17 4.24
284 285 4.265073 TCTTTTCTAGGGCAATTCAGCTC 58.735 43.478 0.00 0.00 34.37 4.09
285 286 3.719268 TTTCTAGGGCAATTCAGCTCA 57.281 42.857 0.00 0.00 37.50 4.26
286 287 3.939740 TTCTAGGGCAATTCAGCTCAT 57.060 42.857 0.00 0.00 37.50 2.90
287 288 3.482156 TCTAGGGCAATTCAGCTCATC 57.518 47.619 0.00 0.00 37.50 2.92
288 289 2.773661 TCTAGGGCAATTCAGCTCATCA 59.226 45.455 0.00 0.00 37.50 3.07
289 290 2.750141 AGGGCAATTCAGCTCATCAT 57.250 45.000 0.00 0.00 37.50 2.45
290 291 3.028094 AGGGCAATTCAGCTCATCATT 57.972 42.857 0.00 0.00 37.50 2.57
291 292 2.693591 AGGGCAATTCAGCTCATCATTG 59.306 45.455 0.00 0.00 37.50 2.82
292 293 2.691526 GGGCAATTCAGCTCATCATTGA 59.308 45.455 7.54 0.00 34.32 2.57
293 294 3.131577 GGGCAATTCAGCTCATCATTGAA 59.868 43.478 7.54 0.00 34.32 2.69
294 295 4.110482 GGCAATTCAGCTCATCATTGAAC 58.890 43.478 7.54 0.00 34.04 3.18
295 296 4.381185 GGCAATTCAGCTCATCATTGAACA 60.381 41.667 7.54 0.00 34.04 3.18
296 297 5.165676 GCAATTCAGCTCATCATTGAACAA 58.834 37.500 7.54 0.00 34.04 2.83
297 298 5.061808 GCAATTCAGCTCATCATTGAACAAC 59.938 40.000 7.54 0.00 34.04 3.32
298 299 6.387465 CAATTCAGCTCATCATTGAACAACT 58.613 36.000 0.00 0.00 34.04 3.16
299 300 5.618056 TTCAGCTCATCATTGAACAACTC 57.382 39.130 0.00 0.00 0.00 3.01
300 301 4.644498 TCAGCTCATCATTGAACAACTCA 58.356 39.130 0.00 0.00 0.00 3.41
302 303 5.049198 TCAGCTCATCATTGAACAACTCAAC 60.049 40.000 0.00 0.00 46.80 3.18
303 304 5.048921 CAGCTCATCATTGAACAACTCAACT 60.049 40.000 0.00 0.00 46.80 3.16
304 305 5.533903 AGCTCATCATTGAACAACTCAACTT 59.466 36.000 0.00 0.00 46.80 2.66
305 306 6.712095 AGCTCATCATTGAACAACTCAACTTA 59.288 34.615 0.00 0.00 46.80 2.24
306 307 7.392673 AGCTCATCATTGAACAACTCAACTTAT 59.607 33.333 0.00 0.00 46.80 1.73
307 308 8.668353 GCTCATCATTGAACAACTCAACTTATA 58.332 33.333 0.00 0.00 46.80 0.98
312 313 8.946085 TCATTGAACAACTCAACTTATATGACC 58.054 33.333 0.00 0.00 46.80 4.02
313 314 8.729756 CATTGAACAACTCAACTTATATGACCA 58.270 33.333 0.00 0.00 46.80 4.02
314 315 8.684386 TTGAACAACTCAACTTATATGACCAA 57.316 30.769 0.00 0.00 39.20 3.67
315 316 8.684386 TGAACAACTCAACTTATATGACCAAA 57.316 30.769 0.00 0.00 0.00 3.28
316 317 8.564574 TGAACAACTCAACTTATATGACCAAAC 58.435 33.333 0.00 0.00 0.00 2.93
317 318 8.458573 AACAACTCAACTTATATGACCAAACA 57.541 30.769 0.00 0.00 0.00 2.83
318 319 8.635765 ACAACTCAACTTATATGACCAAACAT 57.364 30.769 0.00 0.00 0.00 2.71
319 320 8.514594 ACAACTCAACTTATATGACCAAACATG 58.485 33.333 0.00 0.00 0.00 3.21
320 321 8.729756 CAACTCAACTTATATGACCAAACATGA 58.270 33.333 0.00 0.00 0.00 3.07
321 322 8.862325 ACTCAACTTATATGACCAAACATGAA 57.138 30.769 0.00 0.00 0.00 2.57
322 323 8.730680 ACTCAACTTATATGACCAAACATGAAC 58.269 33.333 0.00 0.00 0.00 3.18
323 324 8.628630 TCAACTTATATGACCAAACATGAACA 57.371 30.769 0.00 0.00 0.00 3.18
324 325 8.511321 TCAACTTATATGACCAAACATGAACAC 58.489 33.333 0.00 0.00 0.00 3.32
325 326 8.514594 CAACTTATATGACCAAACATGAACACT 58.485 33.333 0.00 0.00 0.00 3.55
326 327 9.733556 AACTTATATGACCAAACATGAACACTA 57.266 29.630 0.00 0.00 0.00 2.74
327 328 9.162764 ACTTATATGACCAAACATGAACACTAC 57.837 33.333 0.00 0.00 0.00 2.73
328 329 8.500753 TTATATGACCAAACATGAACACTACC 57.499 34.615 0.00 0.00 0.00 3.18
329 330 4.431416 TGACCAAACATGAACACTACCT 57.569 40.909 0.00 0.00 0.00 3.08
330 331 4.787551 TGACCAAACATGAACACTACCTT 58.212 39.130 0.00 0.00 0.00 3.50
331 332 4.819630 TGACCAAACATGAACACTACCTTC 59.180 41.667 0.00 0.00 0.00 3.46
332 333 5.048846 ACCAAACATGAACACTACCTTCT 57.951 39.130 0.00 0.00 0.00 2.85
333 334 5.063880 ACCAAACATGAACACTACCTTCTC 58.936 41.667 0.00 0.00 0.00 2.87
334 335 4.455877 CCAAACATGAACACTACCTTCTCC 59.544 45.833 0.00 0.00 0.00 3.71
335 336 5.308825 CAAACATGAACACTACCTTCTCCT 58.691 41.667 0.00 0.00 0.00 3.69
336 337 5.568620 AACATGAACACTACCTTCTCCTT 57.431 39.130 0.00 0.00 0.00 3.36
337 338 5.153950 ACATGAACACTACCTTCTCCTTC 57.846 43.478 0.00 0.00 0.00 3.46
338 339 3.936372 TGAACACTACCTTCTCCTTCG 57.064 47.619 0.00 0.00 0.00 3.79
339 340 2.561419 TGAACACTACCTTCTCCTTCGG 59.439 50.000 0.00 0.00 0.00 4.30
340 341 0.896226 ACACTACCTTCTCCTTCGGC 59.104 55.000 0.00 0.00 0.00 5.54
341 342 1.187087 CACTACCTTCTCCTTCGGCT 58.813 55.000 0.00 0.00 0.00 5.52
342 343 1.134965 CACTACCTTCTCCTTCGGCTG 60.135 57.143 0.00 0.00 0.00 4.85
343 344 1.272536 ACTACCTTCTCCTTCGGCTGA 60.273 52.381 0.00 0.00 0.00 4.26
344 345 1.825474 CTACCTTCTCCTTCGGCTGAA 59.175 52.381 7.94 7.94 0.00 3.02
345 346 0.321996 ACCTTCTCCTTCGGCTGAAC 59.678 55.000 3.13 0.00 0.00 3.18
346 347 0.321671 CCTTCTCCTTCGGCTGAACA 59.678 55.000 3.13 0.00 0.00 3.18
347 348 1.433534 CTTCTCCTTCGGCTGAACAC 58.566 55.000 3.13 0.00 0.00 3.32
348 349 1.001406 CTTCTCCTTCGGCTGAACACT 59.999 52.381 3.13 0.00 0.00 3.55
349 350 0.603569 TCTCCTTCGGCTGAACACTC 59.396 55.000 3.13 0.00 0.00 3.51
350 351 0.734253 CTCCTTCGGCTGAACACTCG 60.734 60.000 3.13 0.00 0.00 4.18
351 352 2.383527 CCTTCGGCTGAACACTCGC 61.384 63.158 3.13 0.00 0.00 5.03
352 353 1.664649 CTTCGGCTGAACACTCGCA 60.665 57.895 3.13 0.00 0.00 5.10
353 354 1.221466 CTTCGGCTGAACACTCGCAA 61.221 55.000 3.13 0.00 0.00 4.85
354 355 1.495584 TTCGGCTGAACACTCGCAAC 61.496 55.000 3.13 0.00 0.00 4.17
355 356 2.946762 GGCTGAACACTCGCAACC 59.053 61.111 0.00 0.00 0.00 3.77
356 357 1.891919 GGCTGAACACTCGCAACCA 60.892 57.895 0.00 0.00 0.00 3.67
357 358 1.444119 GGCTGAACACTCGCAACCAA 61.444 55.000 0.00 0.00 0.00 3.67
358 359 0.380378 GCTGAACACTCGCAACCAAA 59.620 50.000 0.00 0.00 0.00 3.28
359 360 1.202245 GCTGAACACTCGCAACCAAAA 60.202 47.619 0.00 0.00 0.00 2.44
360 361 2.733858 GCTGAACACTCGCAACCAAAAA 60.734 45.455 0.00 0.00 0.00 1.94
400 401 0.526096 AACGCGCATCATTTCCATGC 60.526 50.000 5.73 0.00 42.84 4.06
434 435 5.598416 AAAAAGACCCTGCCATAAATAGC 57.402 39.130 0.00 0.00 0.00 2.97
443 444 1.946768 GCCATAAATAGCTGAACGGCA 59.053 47.619 8.34 0.00 38.20 5.69
453 454 2.362077 AGCTGAACGGCAAAAGTCAAAT 59.638 40.909 8.34 0.00 34.17 2.32
454 455 3.568007 AGCTGAACGGCAAAAGTCAAATA 59.432 39.130 8.34 0.00 34.17 1.40
455 456 3.668656 GCTGAACGGCAAAAGTCAAATAC 59.331 43.478 0.40 0.00 0.00 1.89
456 457 4.791411 GCTGAACGGCAAAAGTCAAATACA 60.791 41.667 0.40 0.00 0.00 2.29
457 458 4.854399 TGAACGGCAAAAGTCAAATACAG 58.146 39.130 0.00 0.00 0.00 2.74
458 459 4.336993 TGAACGGCAAAAGTCAAATACAGT 59.663 37.500 0.00 0.00 0.00 3.55
459 460 5.527951 TGAACGGCAAAAGTCAAATACAGTA 59.472 36.000 0.00 0.00 0.00 2.74
460 461 5.607119 ACGGCAAAAGTCAAATACAGTAG 57.393 39.130 0.00 0.00 0.00 2.57
487 488 2.700897 CTCTAGATCAAACCGGTGGGAT 59.299 50.000 18.30 18.30 36.97 3.85
512 514 3.733443 AACAAGCAACTTTTAGCTGGG 57.267 42.857 0.00 0.00 41.70 4.45
529 531 0.753262 GGGAGCTCGTACACATCCAT 59.247 55.000 7.83 0.00 0.00 3.41
535 537 0.458260 TCGTACACATCCATCCACCG 59.542 55.000 0.00 0.00 0.00 4.94
573 575 1.338105 CCAAACGAGGAGCATCACAGA 60.338 52.381 0.00 0.00 36.25 3.41
598 600 8.948401 AAACAGAAGCCAGATAGATAGATAGA 57.052 34.615 0.00 0.00 0.00 1.98
626 628 9.764363 AGATAGATAGATATTCACACGCAAAAA 57.236 29.630 0.00 0.00 0.00 1.94
764 768 1.380515 CCAACCACAACCACCACCA 60.381 57.895 0.00 0.00 0.00 4.17
772 777 0.322975 CAACCACCACCAGAGAGAGG 59.677 60.000 0.00 0.00 0.00 3.69
1143 1154 1.451028 GGTGCTGGTCATCTGCTCC 60.451 63.158 0.00 0.00 43.24 4.70
1851 1886 9.609950 AATTACATTTTTGCATGTTTACATTGC 57.390 25.926 0.00 9.07 38.40 3.56
1855 1890 7.440556 ACATTTTTGCATGTTTACATTGCAGTA 59.559 29.630 14.77 8.63 39.55 2.74
1857 1892 5.444663 TTGCATGTTTACATTGCAGTACA 57.555 34.783 14.77 0.00 39.55 2.90
1860 1895 6.453943 TGCATGTTTACATTGCAGTACATTT 58.546 32.000 12.65 0.00 36.35 2.32
1861 1896 6.927936 TGCATGTTTACATTGCAGTACATTTT 59.072 30.769 12.65 0.00 36.35 1.82
1890 1925 3.320610 TGAAACAATCAAACAGGGGGA 57.679 42.857 0.00 0.00 34.30 4.81
1891 1926 3.230134 TGAAACAATCAAACAGGGGGAG 58.770 45.455 0.00 0.00 34.30 4.30
1892 1927 1.632589 AACAATCAAACAGGGGGAGC 58.367 50.000 0.00 0.00 0.00 4.70
1893 1928 0.251787 ACAATCAAACAGGGGGAGCC 60.252 55.000 0.00 0.00 0.00 4.70
1894 1929 1.000896 AATCAAACAGGGGGAGCCG 60.001 57.895 0.00 0.00 0.00 5.52
1895 1930 1.789576 AATCAAACAGGGGGAGCCGT 61.790 55.000 0.00 0.00 0.00 5.68
1896 1931 2.198304 ATCAAACAGGGGGAGCCGTC 62.198 60.000 0.00 0.00 0.00 4.79
1897 1932 2.529389 AAACAGGGGGAGCCGTCT 60.529 61.111 0.00 0.00 0.00 4.18
1898 1933 1.229400 AAACAGGGGGAGCCGTCTA 60.229 57.895 0.00 0.00 0.00 2.59
1899 1934 1.551019 AAACAGGGGGAGCCGTCTAC 61.551 60.000 0.00 0.00 0.00 2.59
1900 1935 3.155167 CAGGGGGAGCCGTCTACC 61.155 72.222 0.00 0.00 43.02 3.18
1901 1936 3.357082 AGGGGGAGCCGTCTACCT 61.357 66.667 0.00 0.00 43.30 3.08
1902 1937 2.365237 GGGGGAGCCGTCTACCTT 60.365 66.667 0.00 0.00 43.30 3.50
1903 1938 1.075748 GGGGGAGCCGTCTACCTTA 60.076 63.158 0.00 0.00 43.30 2.69
1904 1939 0.471401 GGGGGAGCCGTCTACCTTAT 60.471 60.000 0.00 0.00 43.30 1.73
1905 1940 0.680061 GGGGAGCCGTCTACCTTATG 59.320 60.000 0.00 0.00 43.30 1.90
1906 1941 0.033642 GGGAGCCGTCTACCTTATGC 59.966 60.000 0.00 0.00 40.39 3.14
1907 1942 1.041437 GGAGCCGTCTACCTTATGCT 58.959 55.000 0.00 0.00 0.00 3.79
1908 1943 1.000052 GGAGCCGTCTACCTTATGCTC 60.000 57.143 0.00 0.00 43.34 4.26
1909 1944 1.000052 GAGCCGTCTACCTTATGCTCC 60.000 57.143 0.00 0.00 39.36 4.70
1910 1945 0.318784 GCCGTCTACCTTATGCTCCG 60.319 60.000 0.00 0.00 0.00 4.63
1911 1946 0.314302 CCGTCTACCTTATGCTCCGG 59.686 60.000 0.00 0.00 0.00 5.14
1912 1947 0.318784 CGTCTACCTTATGCTCCGGC 60.319 60.000 0.00 0.00 39.26 6.13
1913 1948 1.041437 GTCTACCTTATGCTCCGGCT 58.959 55.000 0.00 0.00 39.59 5.52
1914 1949 1.413077 GTCTACCTTATGCTCCGGCTT 59.587 52.381 0.00 0.00 39.59 4.35
1915 1950 2.626743 GTCTACCTTATGCTCCGGCTTA 59.373 50.000 0.00 0.00 39.59 3.09
1916 1951 3.069158 GTCTACCTTATGCTCCGGCTTAA 59.931 47.826 0.00 0.00 39.59 1.85
1917 1952 3.707611 TCTACCTTATGCTCCGGCTTAAA 59.292 43.478 0.00 0.00 37.53 1.52
1918 1953 3.577805 ACCTTATGCTCCGGCTTAAAT 57.422 42.857 0.00 0.00 37.53 1.40
1919 1954 3.477530 ACCTTATGCTCCGGCTTAAATC 58.522 45.455 0.00 0.00 37.53 2.17
1920 1955 2.480419 CCTTATGCTCCGGCTTAAATCG 59.520 50.000 0.00 0.00 37.53 3.34
1921 1956 2.163818 TATGCTCCGGCTTAAATCGG 57.836 50.000 0.00 9.19 46.89 4.18
1922 1957 1.166531 ATGCTCCGGCTTAAATCGGC 61.167 55.000 0.00 2.63 45.31 5.54
1923 1958 1.817941 GCTCCGGCTTAAATCGGCA 60.818 57.895 0.00 1.60 45.31 5.69
1924 1959 1.373590 GCTCCGGCTTAAATCGGCAA 61.374 55.000 0.00 0.00 45.31 4.52
1925 1960 0.657840 CTCCGGCTTAAATCGGCAAG 59.342 55.000 0.00 2.22 45.31 4.01
1926 1961 0.250793 TCCGGCTTAAATCGGCAAGA 59.749 50.000 0.00 0.00 45.31 3.02
1927 1962 1.134220 TCCGGCTTAAATCGGCAAGAT 60.134 47.619 0.00 0.00 45.31 2.40
1928 1963 2.103432 TCCGGCTTAAATCGGCAAGATA 59.897 45.455 0.00 0.00 45.31 1.98
1929 1964 2.875933 CCGGCTTAAATCGGCAAGATAA 59.124 45.455 0.00 0.00 38.98 1.75
1930 1965 3.314080 CCGGCTTAAATCGGCAAGATAAA 59.686 43.478 0.00 0.00 38.98 1.40
1931 1966 4.201970 CCGGCTTAAATCGGCAAGATAAAA 60.202 41.667 0.00 0.00 38.98 1.52
1932 1967 5.336744 CGGCTTAAATCGGCAAGATAAAAA 58.663 37.500 0.00 0.00 38.98 1.94
1950 1985 4.691860 AAAAAGAAGCATGTCGGAGATG 57.308 40.909 10.55 10.55 40.67 2.90
1951 1986 2.322355 AAGAAGCATGTCGGAGATGG 57.678 50.000 15.88 0.00 40.67 3.51
1952 1987 1.198713 AGAAGCATGTCGGAGATGGT 58.801 50.000 13.35 13.35 40.67 3.55
1953 1988 1.556911 AGAAGCATGTCGGAGATGGTT 59.443 47.619 26.28 26.28 42.68 3.67
1954 1989 2.766263 AGAAGCATGTCGGAGATGGTTA 59.234 45.455 26.10 0.00 40.66 2.85
1955 1990 2.604046 AGCATGTCGGAGATGGTTAC 57.396 50.000 13.35 0.00 40.67 2.50
1956 1991 1.831106 AGCATGTCGGAGATGGTTACA 59.169 47.619 13.35 0.00 40.67 2.41
1957 1992 2.236146 AGCATGTCGGAGATGGTTACAA 59.764 45.455 13.35 0.00 40.67 2.41
1958 1993 3.006940 GCATGTCGGAGATGGTTACAAA 58.993 45.455 15.88 0.00 40.67 2.83
1959 1994 3.181510 GCATGTCGGAGATGGTTACAAAC 60.182 47.826 15.88 0.00 40.67 2.93
1960 1995 2.679450 TGTCGGAGATGGTTACAAACG 58.321 47.619 0.00 0.00 40.67 3.60
1961 1996 2.036217 TGTCGGAGATGGTTACAAACGT 59.964 45.455 0.00 0.00 40.67 3.99
1962 1997 2.665052 GTCGGAGATGGTTACAAACGTC 59.335 50.000 0.00 0.00 40.67 4.34
1963 1998 1.652124 CGGAGATGGTTACAAACGTCG 59.348 52.381 0.00 0.00 0.00 5.12
1964 1999 1.997606 GGAGATGGTTACAAACGTCGG 59.002 52.381 0.00 0.00 0.00 4.79
1965 2000 2.611224 GGAGATGGTTACAAACGTCGGT 60.611 50.000 0.00 0.00 0.00 4.69
1966 2001 3.062042 GAGATGGTTACAAACGTCGGTT 58.938 45.455 0.00 0.00 38.22 4.44
1967 2002 2.803956 AGATGGTTACAAACGTCGGTTG 59.196 45.455 21.15 21.15 36.25 3.77
1968 2003 2.306341 TGGTTACAAACGTCGGTTGA 57.694 45.000 28.79 10.22 36.25 3.18
1969 2004 2.836262 TGGTTACAAACGTCGGTTGAT 58.164 42.857 28.79 15.18 36.25 2.57
1970 2005 2.801679 TGGTTACAAACGTCGGTTGATC 59.198 45.455 28.79 16.58 36.25 2.92
1971 2006 2.159934 GGTTACAAACGTCGGTTGATCG 60.160 50.000 28.79 3.12 36.25 3.69
1972 2007 2.702898 TACAAACGTCGGTTGATCGA 57.297 45.000 28.79 8.56 36.25 3.59
1981 2016 3.079960 TCGGTTGATCGACATTAGAGC 57.920 47.619 15.11 0.00 33.92 4.09
1982 2017 2.425668 TCGGTTGATCGACATTAGAGCA 59.574 45.455 15.11 0.00 33.92 4.26
1983 2018 3.068165 TCGGTTGATCGACATTAGAGCAT 59.932 43.478 15.11 0.00 33.81 3.79
1984 2019 3.426859 CGGTTGATCGACATTAGAGCATC 59.573 47.826 15.11 0.00 33.81 3.91
1985 2020 6.949392 TCGGTTGATCGACATTAGAGCATCT 61.949 44.000 15.11 0.00 41.04 2.90
1986 2021 8.648843 TCGGTTGATCGACATTAGAGCATCTC 62.649 46.154 15.11 0.00 39.49 2.75
2046 2081 4.410400 CCCTCGCACCCCCAAGAC 62.410 72.222 0.00 0.00 0.00 3.01
2047 2082 3.636231 CCTCGCACCCCCAAGACA 61.636 66.667 0.00 0.00 0.00 3.41
2048 2083 2.358737 CTCGCACCCCCAAGACAC 60.359 66.667 0.00 0.00 0.00 3.67
2049 2084 3.901797 CTCGCACCCCCAAGACACC 62.902 68.421 0.00 0.00 0.00 4.16
2051 2086 3.948719 GCACCCCCAAGACACCGA 61.949 66.667 0.00 0.00 0.00 4.69
2052 2087 2.833227 CACCCCCAAGACACCGAA 59.167 61.111 0.00 0.00 0.00 4.30
2053 2088 1.149627 CACCCCCAAGACACCGAAA 59.850 57.895 0.00 0.00 0.00 3.46
2054 2089 0.251165 CACCCCCAAGACACCGAAAT 60.251 55.000 0.00 0.00 0.00 2.17
2055 2090 0.037734 ACCCCCAAGACACCGAAATC 59.962 55.000 0.00 0.00 0.00 2.17
2056 2091 0.679960 CCCCCAAGACACCGAAATCC 60.680 60.000 0.00 0.00 0.00 3.01
2057 2092 1.024579 CCCCAAGACACCGAAATCCG 61.025 60.000 0.00 0.00 38.18 4.18
2058 2093 1.644786 CCCAAGACACCGAAATCCGC 61.645 60.000 0.00 0.00 36.84 5.54
2059 2094 1.644786 CCAAGACACCGAAATCCGCC 61.645 60.000 0.00 0.00 36.84 6.13
2060 2095 1.740296 AAGACACCGAAATCCGCCG 60.740 57.895 0.00 0.00 36.84 6.46
2077 2112 4.050934 GGCTCGGCCCGTTTTTGG 62.051 66.667 1.63 0.00 44.06 3.28
2087 2122 3.378602 GTTTTTGGGCCCGGCGAT 61.379 61.111 19.37 0.00 0.00 4.58
2088 2123 3.065567 TTTTTGGGCCCGGCGATC 61.066 61.111 19.37 0.00 0.00 3.69
2142 2177 4.715523 CTCCGGCGCAAGGGGAAA 62.716 66.667 15.06 0.00 38.28 3.13
2143 2178 4.272511 TCCGGCGCAAGGGGAAAA 62.273 61.111 19.03 0.00 38.28 2.29
2144 2179 4.050934 CCGGCGCAAGGGGAAAAC 62.051 66.667 10.83 0.00 38.28 2.43
2145 2180 3.291383 CGGCGCAAGGGGAAAACA 61.291 61.111 10.83 0.00 38.28 2.83
2146 2181 2.338620 GGCGCAAGGGGAAAACAC 59.661 61.111 10.83 0.00 38.28 3.32
2147 2182 2.050442 GCGCAAGGGGAAAACACG 60.050 61.111 0.30 0.00 38.28 4.49
2148 2183 2.050442 CGCAAGGGGAAAACACGC 60.050 61.111 0.00 0.00 0.00 5.34
2149 2184 2.551912 CGCAAGGGGAAAACACGCT 61.552 57.895 0.00 0.00 0.00 5.07
2150 2185 1.739667 GCAAGGGGAAAACACGCTT 59.260 52.632 0.00 0.00 41.11 4.68
2152 2187 2.425562 AAGGGGAAAACACGCTTGG 58.574 52.632 0.00 0.00 39.30 3.61
2153 2188 1.112916 AAGGGGAAAACACGCTTGGG 61.113 55.000 0.00 0.00 39.30 4.12
2154 2189 2.338620 GGGAAAACACGCTTGGGC 59.661 61.111 0.00 0.00 0.00 5.36
2155 2190 2.494530 GGGAAAACACGCTTGGGCA 61.495 57.895 0.00 0.00 38.60 5.36
2156 2191 1.439644 GGAAAACACGCTTGGGCAA 59.560 52.632 0.00 0.00 38.60 4.52
2157 2192 0.874175 GGAAAACACGCTTGGGCAAC 60.874 55.000 0.00 0.00 38.60 4.17
2158 2193 0.179124 GAAAACACGCTTGGGCAACA 60.179 50.000 0.00 0.00 38.60 3.33
2159 2194 0.459411 AAAACACGCTTGGGCAACAC 60.459 50.000 0.00 0.00 38.60 3.32
2160 2195 2.291457 AAACACGCTTGGGCAACACC 62.291 55.000 0.00 0.00 38.60 4.16
2161 2196 4.326766 CACGCTTGGGCAACACCG 62.327 66.667 0.00 0.00 40.62 4.94
2162 2197 4.868116 ACGCTTGGGCAACACCGT 62.868 61.111 0.00 0.00 40.62 4.83
2163 2198 4.025401 CGCTTGGGCAACACCGTC 62.025 66.667 0.00 0.00 40.62 4.79
2164 2199 2.904866 GCTTGGGCAACACCGTCA 60.905 61.111 0.00 0.00 40.62 4.35
2165 2200 2.268076 GCTTGGGCAACACCGTCAT 61.268 57.895 0.00 0.00 40.62 3.06
2166 2201 1.580942 CTTGGGCAACACCGTCATG 59.419 57.895 0.00 0.00 40.62 3.07
2167 2202 0.888736 CTTGGGCAACACCGTCATGA 60.889 55.000 0.00 0.00 40.62 3.07
2168 2203 0.888736 TTGGGCAACACCGTCATGAG 60.889 55.000 0.00 0.00 40.62 2.90
2169 2204 1.003839 GGGCAACACCGTCATGAGA 60.004 57.895 0.00 0.00 40.62 3.27
2170 2205 0.605319 GGGCAACACCGTCATGAGAA 60.605 55.000 0.00 0.00 40.62 2.87
2171 2206 1.234821 GGCAACACCGTCATGAGAAA 58.765 50.000 0.00 0.00 0.00 2.52
2172 2207 1.606668 GGCAACACCGTCATGAGAAAA 59.393 47.619 0.00 0.00 0.00 2.29
2173 2208 2.350772 GGCAACACCGTCATGAGAAAAG 60.351 50.000 0.00 0.00 0.00 2.27
2174 2209 2.290641 GCAACACCGTCATGAGAAAAGT 59.709 45.455 0.00 0.00 0.00 2.66
2175 2210 3.607078 GCAACACCGTCATGAGAAAAGTC 60.607 47.826 0.00 0.00 0.00 3.01
2176 2211 3.469008 ACACCGTCATGAGAAAAGTCA 57.531 42.857 0.00 0.00 0.00 3.41
2177 2212 3.804036 ACACCGTCATGAGAAAAGTCAA 58.196 40.909 0.00 0.00 0.00 3.18
2178 2213 3.809832 ACACCGTCATGAGAAAAGTCAAG 59.190 43.478 0.00 0.00 0.00 3.02
2179 2214 2.808543 ACCGTCATGAGAAAAGTCAAGC 59.191 45.455 0.00 0.00 0.00 4.01
2180 2215 2.160417 CCGTCATGAGAAAAGTCAAGCC 59.840 50.000 0.00 0.00 0.00 4.35
2181 2216 2.807967 CGTCATGAGAAAAGTCAAGCCA 59.192 45.455 0.00 0.00 0.00 4.75
2182 2217 3.250762 CGTCATGAGAAAAGTCAAGCCAA 59.749 43.478 0.00 0.00 0.00 4.52
2183 2218 4.083110 CGTCATGAGAAAAGTCAAGCCAAT 60.083 41.667 0.00 0.00 0.00 3.16
2184 2219 5.397326 GTCATGAGAAAAGTCAAGCCAATC 58.603 41.667 0.00 0.00 0.00 2.67
2185 2220 4.154737 TCATGAGAAAAGTCAAGCCAATCG 59.845 41.667 0.00 0.00 0.00 3.34
2186 2221 3.476552 TGAGAAAAGTCAAGCCAATCGT 58.523 40.909 0.00 0.00 0.00 3.73
2187 2222 3.498397 TGAGAAAAGTCAAGCCAATCGTC 59.502 43.478 0.00 0.00 0.00 4.20
2188 2223 2.814336 AGAAAAGTCAAGCCAATCGTCC 59.186 45.455 0.00 0.00 0.00 4.79
2189 2224 2.270352 AAAGTCAAGCCAATCGTCCA 57.730 45.000 0.00 0.00 0.00 4.02
2190 2225 1.813513 AAGTCAAGCCAATCGTCCAG 58.186 50.000 0.00 0.00 0.00 3.86
2191 2226 0.976641 AGTCAAGCCAATCGTCCAGA 59.023 50.000 0.00 0.00 0.00 3.86
2192 2227 1.556911 AGTCAAGCCAATCGTCCAGAT 59.443 47.619 0.00 0.00 42.43 2.90
2194 2229 2.352960 GTCAAGCCAATCGTCCAGATTC 59.647 50.000 0.00 0.00 45.95 2.52
2195 2230 1.328680 CAAGCCAATCGTCCAGATTCG 59.671 52.381 0.00 0.00 45.95 3.34
2196 2231 1.643832 GCCAATCGTCCAGATTCGC 59.356 57.895 0.00 0.00 45.95 4.70
2197 2232 1.776034 GCCAATCGTCCAGATTCGCC 61.776 60.000 0.14 0.00 45.95 5.54
2198 2233 1.160329 CCAATCGTCCAGATTCGCCC 61.160 60.000 0.00 0.00 45.95 6.13
2199 2234 1.146263 AATCGTCCAGATTCGCCCC 59.854 57.895 0.00 0.00 45.95 5.80
2200 2235 2.325393 AATCGTCCAGATTCGCCCCC 62.325 60.000 0.00 0.00 45.95 5.40
2201 2236 3.781307 CGTCCAGATTCGCCCCCA 61.781 66.667 0.00 0.00 0.00 4.96
2202 2237 2.124695 GTCCAGATTCGCCCCCAC 60.125 66.667 0.00 0.00 0.00 4.61
2203 2238 3.407967 TCCAGATTCGCCCCCACC 61.408 66.667 0.00 0.00 0.00 4.61
2204 2239 4.506255 CCAGATTCGCCCCCACCC 62.506 72.222 0.00 0.00 0.00 4.61
2205 2240 4.506255 CAGATTCGCCCCCACCCC 62.506 72.222 0.00 0.00 0.00 4.95
2233 2268 4.740822 GGCCACCACCTTGCCGAT 62.741 66.667 0.00 0.00 35.08 4.18
2234 2269 3.134127 GCCACCACCTTGCCGATC 61.134 66.667 0.00 0.00 0.00 3.69
2235 2270 2.438434 CCACCACCTTGCCGATCC 60.438 66.667 0.00 0.00 0.00 3.36
2236 2271 2.438434 CACCACCTTGCCGATCCC 60.438 66.667 0.00 0.00 0.00 3.85
2237 2272 4.096003 ACCACCTTGCCGATCCCG 62.096 66.667 0.00 0.00 0.00 5.14
2266 2301 4.227134 CGCCCAGCACCGCTAGAT 62.227 66.667 0.00 0.00 36.40 1.98
2267 2302 2.280457 GCCCAGCACCGCTAGATC 60.280 66.667 0.00 0.00 36.40 2.75
2268 2303 2.028190 CCCAGCACCGCTAGATCG 59.972 66.667 0.00 0.00 36.40 3.69
2275 2310 4.268687 CCGCTAGATCGGCCATTC 57.731 61.111 2.24 0.00 43.18 2.67
2276 2311 1.374758 CCGCTAGATCGGCCATTCC 60.375 63.158 2.24 0.00 43.18 3.01
2277 2312 1.374758 CGCTAGATCGGCCATTCCC 60.375 63.158 2.24 0.00 0.00 3.97
2278 2313 1.003233 GCTAGATCGGCCATTCCCC 60.003 63.158 2.24 0.00 0.00 4.81
2279 2314 1.293498 CTAGATCGGCCATTCCCCG 59.707 63.158 2.24 0.00 46.88 5.73
2280 2315 2.788191 CTAGATCGGCCATTCCCCGC 62.788 65.000 2.24 0.00 45.19 6.13
2291 2326 2.605295 TCCCCGCCGGAAAAGAGA 60.605 61.111 5.05 0.00 37.88 3.10
2292 2327 2.125106 CCCCGCCGGAAAAGAGAG 60.125 66.667 5.05 0.00 0.00 3.20
2293 2328 2.656069 CCCCGCCGGAAAAGAGAGA 61.656 63.158 5.05 0.00 0.00 3.10
2294 2329 1.295423 CCCGCCGGAAAAGAGAGAA 59.705 57.895 5.05 0.00 0.00 2.87
2295 2330 0.741221 CCCGCCGGAAAAGAGAGAAG 60.741 60.000 5.05 0.00 0.00 2.85
2296 2331 0.741221 CCGCCGGAAAAGAGAGAAGG 60.741 60.000 5.05 0.00 0.00 3.46
2297 2332 0.037232 CGCCGGAAAAGAGAGAAGGT 60.037 55.000 5.05 0.00 0.00 3.50
2298 2333 1.608283 CGCCGGAAAAGAGAGAAGGTT 60.608 52.381 5.05 0.00 0.00 3.50
2299 2334 2.505405 GCCGGAAAAGAGAGAAGGTTT 58.495 47.619 5.05 0.00 0.00 3.27
2300 2335 2.885266 GCCGGAAAAGAGAGAAGGTTTT 59.115 45.455 5.05 0.00 0.00 2.43
2301 2336 3.304726 GCCGGAAAAGAGAGAAGGTTTTG 60.305 47.826 5.05 0.00 0.00 2.44
2302 2337 3.304726 CCGGAAAAGAGAGAAGGTTTTGC 60.305 47.826 0.00 0.00 0.00 3.68
2303 2338 3.304726 CGGAAAAGAGAGAAGGTTTTGCC 60.305 47.826 0.00 0.00 30.25 4.52
2304 2339 3.636764 GGAAAAGAGAGAAGGTTTTGCCA 59.363 43.478 0.00 0.00 40.61 4.92
2305 2340 4.499865 GGAAAAGAGAGAAGGTTTTGCCAC 60.500 45.833 0.00 0.00 40.61 5.01
2306 2341 1.884235 AGAGAGAAGGTTTTGCCACG 58.116 50.000 0.00 0.00 40.61 4.94
2307 2342 0.875059 GAGAGAAGGTTTTGCCACGG 59.125 55.000 0.00 0.00 40.61 4.94
2308 2343 1.172812 AGAGAAGGTTTTGCCACGGC 61.173 55.000 0.00 0.00 40.61 5.68
2319 2354 4.767255 CCACGGCAGCCTCTCCAC 62.767 72.222 10.54 0.00 0.00 4.02
2320 2355 4.767255 CACGGCAGCCTCTCCACC 62.767 72.222 10.54 0.00 0.00 4.61
2322 2357 4.767255 CGGCAGCCTCTCCACCAC 62.767 72.222 10.54 0.00 0.00 4.16
2323 2358 4.416738 GGCAGCCTCTCCACCACC 62.417 72.222 3.29 0.00 0.00 4.61
2324 2359 4.767255 GCAGCCTCTCCACCACCG 62.767 72.222 0.00 0.00 0.00 4.94
2325 2360 3.314331 CAGCCTCTCCACCACCGT 61.314 66.667 0.00 0.00 0.00 4.83
2326 2361 2.997897 AGCCTCTCCACCACCGTC 60.998 66.667 0.00 0.00 0.00 4.79
2327 2362 4.083862 GCCTCTCCACCACCGTCC 62.084 72.222 0.00 0.00 0.00 4.79
2328 2363 3.760035 CCTCTCCACCACCGTCCG 61.760 72.222 0.00 0.00 0.00 4.79
2329 2364 2.675423 CTCTCCACCACCGTCCGA 60.675 66.667 0.00 0.00 0.00 4.55
2330 2365 2.675423 TCTCCACCACCGTCCGAG 60.675 66.667 0.00 0.00 0.00 4.63
2331 2366 4.436998 CTCCACCACCGTCCGAGC 62.437 72.222 0.00 0.00 0.00 5.03
2334 2369 4.778415 CACCACCGTCCGAGCGAG 62.778 72.222 0.00 0.00 0.00 5.03
2336 2371 4.052229 CCACCGTCCGAGCGAGTT 62.052 66.667 0.00 0.00 0.00 3.01
2337 2372 2.049433 CACCGTCCGAGCGAGTTT 60.049 61.111 0.00 0.00 0.00 2.66
2338 2373 1.663702 CACCGTCCGAGCGAGTTTT 60.664 57.895 0.00 0.00 0.00 2.43
2339 2374 1.372623 ACCGTCCGAGCGAGTTTTC 60.373 57.895 0.00 0.00 0.00 2.29
2340 2375 2.092882 CCGTCCGAGCGAGTTTTCC 61.093 63.158 0.00 0.00 0.00 3.13
2341 2376 2.434134 CGTCCGAGCGAGTTTTCCG 61.434 63.158 0.00 0.00 0.00 4.30
2347 2382 4.148645 GCGAGTTTTCCGCCGCTC 62.149 66.667 0.00 0.00 46.22 5.03
2348 2383 3.488090 CGAGTTTTCCGCCGCTCC 61.488 66.667 0.00 0.00 0.00 4.70
2349 2384 3.488090 GAGTTTTCCGCCGCTCCG 61.488 66.667 0.00 0.00 0.00 4.63
2372 2407 2.280865 GCAGGGCGGTATACTGGC 60.281 66.667 26.08 26.08 45.98 4.85
2376 2411 3.543641 GGCGGTATACTGGCGGGT 61.544 66.667 21.13 0.00 38.06 5.28
2377 2412 2.279918 GCGGTATACTGGCGGGTG 60.280 66.667 13.59 0.00 0.00 4.61
2378 2413 3.085119 GCGGTATACTGGCGGGTGT 62.085 63.158 13.59 0.00 0.00 4.16
2379 2414 1.227147 CGGTATACTGGCGGGTGTG 60.227 63.158 3.55 0.00 0.00 3.82
2380 2415 1.523032 GGTATACTGGCGGGTGTGC 60.523 63.158 2.25 0.00 0.00 4.57
2381 2416 1.881252 GTATACTGGCGGGTGTGCG 60.881 63.158 0.00 0.00 35.06 5.34
2382 2417 3.726595 TATACTGGCGGGTGTGCGC 62.727 63.158 0.00 0.00 35.06 6.09
2411 2446 3.284449 GCCAGGTGTTCGGCGTTT 61.284 61.111 6.85 0.00 38.82 3.60
2412 2447 2.841160 GCCAGGTGTTCGGCGTTTT 61.841 57.895 6.85 0.00 38.82 2.43
2413 2448 1.008995 CCAGGTGTTCGGCGTTTTG 60.009 57.895 6.85 0.00 0.00 2.44
2414 2449 1.720694 CCAGGTGTTCGGCGTTTTGT 61.721 55.000 6.85 0.00 0.00 2.83
2415 2450 0.316689 CAGGTGTTCGGCGTTTTGTC 60.317 55.000 6.85 0.00 0.00 3.18
2416 2451 0.463116 AGGTGTTCGGCGTTTTGTCT 60.463 50.000 6.85 0.00 0.00 3.41
2417 2452 0.316689 GGTGTTCGGCGTTTTGTCTG 60.317 55.000 6.85 0.00 0.00 3.51
2418 2453 0.928451 GTGTTCGGCGTTTTGTCTGC 60.928 55.000 6.85 0.00 0.00 4.26
2419 2454 1.092921 TGTTCGGCGTTTTGTCTGCT 61.093 50.000 6.85 0.00 0.00 4.24
2420 2455 0.384353 GTTCGGCGTTTTGTCTGCTC 60.384 55.000 6.85 0.00 0.00 4.26
2421 2456 1.827315 TTCGGCGTTTTGTCTGCTCG 61.827 55.000 6.85 0.00 0.00 5.03
2422 2457 2.556287 GGCGTTTTGTCTGCTCGG 59.444 61.111 0.00 0.00 0.00 4.63
2423 2458 2.127232 GCGTTTTGTCTGCTCGGC 60.127 61.111 0.00 0.00 0.00 5.54
2424 2459 2.170985 CGTTTTGTCTGCTCGGCG 59.829 61.111 0.00 0.00 0.00 6.46
2425 2460 2.307309 CGTTTTGTCTGCTCGGCGA 61.307 57.895 10.14 10.14 0.00 5.54
2426 2461 1.626654 CGTTTTGTCTGCTCGGCGAT 61.627 55.000 11.27 0.00 0.00 4.58
2427 2462 0.179215 GTTTTGTCTGCTCGGCGATG 60.179 55.000 11.27 5.99 0.00 3.84
2428 2463 1.298157 TTTTGTCTGCTCGGCGATGG 61.298 55.000 11.27 0.00 0.00 3.51
2429 2464 2.166130 TTTGTCTGCTCGGCGATGGA 62.166 55.000 11.27 6.27 0.00 3.41
2430 2465 2.583593 GTCTGCTCGGCGATGGAC 60.584 66.667 11.27 14.82 0.00 4.02
2431 2466 2.755876 TCTGCTCGGCGATGGACT 60.756 61.111 11.27 0.00 0.00 3.85
2432 2467 2.279120 CTGCTCGGCGATGGACTC 60.279 66.667 11.27 0.00 0.00 3.36
2440 2475 4.616592 CGATGGACTCGGATGACG 57.383 61.111 0.00 0.00 43.82 4.35
2450 2485 2.496817 GGATGACGAGAAGGCGCT 59.503 61.111 7.64 0.00 33.86 5.92
2451 2486 1.590259 GGATGACGAGAAGGCGCTC 60.590 63.158 7.64 0.00 33.86 5.03
2466 2501 2.882777 CTCGCGGTGCTGCTGTAG 60.883 66.667 6.13 0.00 0.00 2.74
2467 2502 4.435436 TCGCGGTGCTGCTGTAGG 62.435 66.667 6.13 0.00 0.00 3.18
2468 2503 4.435436 CGCGGTGCTGCTGTAGGA 62.435 66.667 0.00 0.00 0.00 2.94
2469 2504 2.510238 GCGGTGCTGCTGTAGGAG 60.510 66.667 0.00 0.00 36.50 3.69
2470 2505 2.185350 CGGTGCTGCTGTAGGAGG 59.815 66.667 0.00 0.00 33.79 4.30
2471 2506 2.351244 CGGTGCTGCTGTAGGAGGA 61.351 63.158 0.00 0.00 33.79 3.71
2472 2507 1.888436 CGGTGCTGCTGTAGGAGGAA 61.888 60.000 0.00 0.00 35.39 3.36
2473 2508 0.107945 GGTGCTGCTGTAGGAGGAAG 60.108 60.000 0.00 0.00 35.39 3.46
2474 2509 0.742635 GTGCTGCTGTAGGAGGAAGC 60.743 60.000 0.00 0.00 35.39 3.86
2475 2510 1.153269 GCTGCTGTAGGAGGAAGCC 60.153 63.158 2.57 0.00 36.05 4.35
2476 2511 1.142748 CTGCTGTAGGAGGAAGCCG 59.857 63.158 0.00 0.00 36.05 5.52
2477 2512 1.304962 TGCTGTAGGAGGAAGCCGA 60.305 57.895 0.00 0.00 36.05 5.54
2478 2513 0.687757 TGCTGTAGGAGGAAGCCGAT 60.688 55.000 0.00 0.00 36.05 4.18
2479 2514 0.249657 GCTGTAGGAGGAAGCCGATG 60.250 60.000 0.00 0.00 0.00 3.84
2480 2515 0.390860 CTGTAGGAGGAAGCCGATGG 59.609 60.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.005261 TGTTATTGTGGATTTTGCGCAGT 59.995 39.130 11.31 0.00 28.00 4.40
1 2 3.573598 TGTTATTGTGGATTTTGCGCAG 58.426 40.909 11.31 0.00 28.00 5.18
2 3 3.650070 TGTTATTGTGGATTTTGCGCA 57.350 38.095 5.66 5.66 0.00 6.09
3 4 4.423732 AGATGTTATTGTGGATTTTGCGC 58.576 39.130 0.00 0.00 0.00 6.09
4 5 6.949578 AAAGATGTTATTGTGGATTTTGCG 57.050 33.333 0.00 0.00 0.00 4.85
27 28 8.968969 GGACTAGGAAGATACTCTGTCTAAAAA 58.031 37.037 0.00 0.00 0.00 1.94
28 29 8.114102 TGGACTAGGAAGATACTCTGTCTAAAA 58.886 37.037 0.00 0.00 0.00 1.52
29 30 7.556996 GTGGACTAGGAAGATACTCTGTCTAAA 59.443 40.741 0.00 0.00 0.00 1.85
30 31 7.055378 GTGGACTAGGAAGATACTCTGTCTAA 58.945 42.308 0.00 0.00 0.00 2.10
31 32 6.409464 GGTGGACTAGGAAGATACTCTGTCTA 60.409 46.154 0.00 0.00 0.00 2.59
32 33 5.442391 GTGGACTAGGAAGATACTCTGTCT 58.558 45.833 0.00 0.00 0.00 3.41
33 34 4.581409 GGTGGACTAGGAAGATACTCTGTC 59.419 50.000 0.00 0.00 0.00 3.51
34 35 4.230964 AGGTGGACTAGGAAGATACTCTGT 59.769 45.833 0.00 0.00 0.00 3.41
35 36 4.798882 AGGTGGACTAGGAAGATACTCTG 58.201 47.826 0.00 0.00 0.00 3.35
36 37 5.205056 CAAGGTGGACTAGGAAGATACTCT 58.795 45.833 0.00 0.00 0.00 3.24
37 38 4.957327 ACAAGGTGGACTAGGAAGATACTC 59.043 45.833 0.00 0.00 0.00 2.59
38 39 4.712337 CACAAGGTGGACTAGGAAGATACT 59.288 45.833 0.00 0.00 0.00 2.12
39 40 4.710375 TCACAAGGTGGACTAGGAAGATAC 59.290 45.833 0.00 0.00 33.87 2.24
40 41 4.942944 TCACAAGGTGGACTAGGAAGATA 58.057 43.478 0.00 0.00 33.87 1.98
41 42 3.791320 TCACAAGGTGGACTAGGAAGAT 58.209 45.455 0.00 0.00 33.87 2.40
42 43 3.254093 TCACAAGGTGGACTAGGAAGA 57.746 47.619 0.00 0.00 33.87 2.87
43 44 3.665190 GTTCACAAGGTGGACTAGGAAG 58.335 50.000 0.54 0.00 38.86 3.46
44 45 2.036733 CGTTCACAAGGTGGACTAGGAA 59.963 50.000 6.26 0.00 39.70 3.36
45 46 1.616865 CGTTCACAAGGTGGACTAGGA 59.383 52.381 6.26 0.00 39.70 2.94
46 47 1.343465 ACGTTCACAAGGTGGACTAGG 59.657 52.381 6.26 0.00 39.70 3.02
47 48 2.296471 AGACGTTCACAAGGTGGACTAG 59.704 50.000 6.26 0.00 39.70 2.57
48 49 2.313317 AGACGTTCACAAGGTGGACTA 58.687 47.619 6.26 0.00 39.70 2.59
49 50 1.120530 AGACGTTCACAAGGTGGACT 58.879 50.000 6.26 0.00 39.70 3.85
50 51 1.949465 AAGACGTTCACAAGGTGGAC 58.051 50.000 0.00 0.00 38.58 4.02
51 52 2.036733 CCTAAGACGTTCACAAGGTGGA 59.963 50.000 0.00 0.00 33.87 4.02
52 53 2.224209 ACCTAAGACGTTCACAAGGTGG 60.224 50.000 7.84 0.00 36.03 4.61
53 54 3.057734 GACCTAAGACGTTCACAAGGTG 58.942 50.000 12.02 0.00 37.47 4.00
54 55 2.963782 AGACCTAAGACGTTCACAAGGT 59.036 45.455 8.25 8.25 39.99 3.50
55 56 3.662247 AGACCTAAGACGTTCACAAGG 57.338 47.619 0.00 0.00 0.00 3.61
56 57 6.700520 ACTTAAAGACCTAAGACGTTCACAAG 59.299 38.462 0.00 0.00 33.78 3.16
57 58 6.576185 ACTTAAAGACCTAAGACGTTCACAA 58.424 36.000 0.00 0.00 33.78 3.33
58 59 6.152932 ACTTAAAGACCTAAGACGTTCACA 57.847 37.500 0.00 0.00 33.78 3.58
91 92 9.535878 GTCCATGGTTGTTGATTAAACTTTTTA 57.464 29.630 12.58 0.00 39.70 1.52
92 93 8.264347 AGTCCATGGTTGTTGATTAAACTTTTT 58.736 29.630 12.58 0.00 39.70 1.94
93 94 7.791029 AGTCCATGGTTGTTGATTAAACTTTT 58.209 30.769 12.58 0.00 39.70 2.27
94 95 7.069331 TGAGTCCATGGTTGTTGATTAAACTTT 59.931 33.333 12.58 0.00 39.70 2.66
95 96 6.549364 TGAGTCCATGGTTGTTGATTAAACTT 59.451 34.615 12.58 0.00 39.70 2.66
96 97 6.068010 TGAGTCCATGGTTGTTGATTAAACT 58.932 36.000 12.58 2.59 39.70 2.66
97 98 6.325919 TGAGTCCATGGTTGTTGATTAAAC 57.674 37.500 12.58 0.00 39.41 2.01
98 99 7.148086 GCTATGAGTCCATGGTTGTTGATTAAA 60.148 37.037 12.58 0.00 34.22 1.52
99 100 6.318648 GCTATGAGTCCATGGTTGTTGATTAA 59.681 38.462 12.58 0.00 34.22 1.40
100 101 5.822519 GCTATGAGTCCATGGTTGTTGATTA 59.177 40.000 12.58 0.00 34.22 1.75
101 102 4.641989 GCTATGAGTCCATGGTTGTTGATT 59.358 41.667 12.58 0.00 34.22 2.57
102 103 4.202441 GCTATGAGTCCATGGTTGTTGAT 58.798 43.478 12.58 0.68 34.22 2.57
103 104 3.008923 TGCTATGAGTCCATGGTTGTTGA 59.991 43.478 12.58 0.00 34.22 3.18
104 105 3.346315 TGCTATGAGTCCATGGTTGTTG 58.654 45.455 12.58 0.00 34.22 3.33
105 106 3.719268 TGCTATGAGTCCATGGTTGTT 57.281 42.857 12.58 0.00 34.22 2.83
106 107 3.939740 ATGCTATGAGTCCATGGTTGT 57.060 42.857 12.58 0.00 34.22 3.32
107 108 3.567164 GGAATGCTATGAGTCCATGGTTG 59.433 47.826 12.58 0.00 34.22 3.77
108 109 3.435601 GGGAATGCTATGAGTCCATGGTT 60.436 47.826 12.58 0.82 34.22 3.67
109 110 2.107204 GGGAATGCTATGAGTCCATGGT 59.893 50.000 12.58 0.00 34.22 3.55
110 111 2.107031 TGGGAATGCTATGAGTCCATGG 59.893 50.000 4.97 4.97 34.31 3.66
111 112 3.497103 TGGGAATGCTATGAGTCCATG 57.503 47.619 0.00 0.00 34.31 3.66
112 113 3.396946 ACATGGGAATGCTATGAGTCCAT 59.603 43.478 4.97 0.00 36.81 3.41
113 114 2.779430 ACATGGGAATGCTATGAGTCCA 59.221 45.455 4.97 0.00 31.30 4.02
114 115 3.498774 ACATGGGAATGCTATGAGTCC 57.501 47.619 4.97 0.00 0.00 3.85
115 116 7.229306 TCAAATTACATGGGAATGCTATGAGTC 59.771 37.037 4.97 0.00 0.00 3.36
116 117 7.062322 TCAAATTACATGGGAATGCTATGAGT 58.938 34.615 4.97 0.00 0.00 3.41
117 118 7.514784 TCAAATTACATGGGAATGCTATGAG 57.485 36.000 4.97 0.00 0.00 2.90
118 119 7.524202 GCATCAAATTACATGGGAATGCTATGA 60.524 37.037 4.97 1.49 0.00 2.15
119 120 6.588756 GCATCAAATTACATGGGAATGCTATG 59.411 38.462 0.00 0.00 0.00 2.23
120 121 6.295462 GGCATCAAATTACATGGGAATGCTAT 60.295 38.462 0.00 0.00 0.00 2.97
121 122 5.010922 GGCATCAAATTACATGGGAATGCTA 59.989 40.000 0.00 0.00 0.00 3.49
122 123 4.202284 GGCATCAAATTACATGGGAATGCT 60.202 41.667 0.00 0.00 0.00 3.79
123 124 4.060205 GGCATCAAATTACATGGGAATGC 58.940 43.478 0.00 2.64 0.00 3.56
124 125 4.503643 GGGGCATCAAATTACATGGGAATG 60.504 45.833 0.00 0.00 0.00 2.67
125 126 3.647590 GGGGCATCAAATTACATGGGAAT 59.352 43.478 0.00 0.00 0.00 3.01
126 127 3.037549 GGGGCATCAAATTACATGGGAA 58.962 45.455 0.00 0.00 0.00 3.97
127 128 2.247111 AGGGGCATCAAATTACATGGGA 59.753 45.455 0.00 0.00 0.00 4.37
128 129 2.681422 AGGGGCATCAAATTACATGGG 58.319 47.619 0.00 0.00 0.00 4.00
129 130 4.406649 AGAAAGGGGCATCAAATTACATGG 59.593 41.667 0.00 0.00 0.00 3.66
130 131 5.603170 AGAAAGGGGCATCAAATTACATG 57.397 39.130 0.00 0.00 0.00 3.21
131 132 6.194235 TGTAGAAAGGGGCATCAAATTACAT 58.806 36.000 0.00 0.00 0.00 2.29
132 133 5.575157 TGTAGAAAGGGGCATCAAATTACA 58.425 37.500 0.00 0.00 0.00 2.41
133 134 6.524101 TTGTAGAAAGGGGCATCAAATTAC 57.476 37.500 0.00 0.00 0.00 1.89
134 135 6.071051 GGTTTGTAGAAAGGGGCATCAAATTA 60.071 38.462 0.00 0.00 0.00 1.40
135 136 5.279960 GGTTTGTAGAAAGGGGCATCAAATT 60.280 40.000 0.00 0.00 0.00 1.82
136 137 4.222810 GGTTTGTAGAAAGGGGCATCAAAT 59.777 41.667 0.00 0.00 0.00 2.32
137 138 3.576550 GGTTTGTAGAAAGGGGCATCAAA 59.423 43.478 0.00 0.00 0.00 2.69
138 139 3.161866 GGTTTGTAGAAAGGGGCATCAA 58.838 45.455 0.00 0.00 0.00 2.57
139 140 2.378547 AGGTTTGTAGAAAGGGGCATCA 59.621 45.455 0.00 0.00 0.00 3.07
140 141 3.087370 AGGTTTGTAGAAAGGGGCATC 57.913 47.619 0.00 0.00 0.00 3.91
141 142 3.542969 AAGGTTTGTAGAAAGGGGCAT 57.457 42.857 0.00 0.00 0.00 4.40
142 143 3.322191 AAAGGTTTGTAGAAAGGGGCA 57.678 42.857 0.00 0.00 0.00 5.36
143 144 3.639561 TGAAAAGGTTTGTAGAAAGGGGC 59.360 43.478 0.00 0.00 0.00 5.80
144 145 5.279456 CCATGAAAAGGTTTGTAGAAAGGGG 60.279 44.000 0.00 0.00 0.00 4.79
145 146 5.783111 CCATGAAAAGGTTTGTAGAAAGGG 58.217 41.667 0.00 0.00 0.00 3.95
146 147 5.221422 TGCCATGAAAAGGTTTGTAGAAAGG 60.221 40.000 0.00 0.00 0.00 3.11
147 148 5.841810 TGCCATGAAAAGGTTTGTAGAAAG 58.158 37.500 0.00 0.00 0.00 2.62
148 149 5.860941 TGCCATGAAAAGGTTTGTAGAAA 57.139 34.783 0.00 0.00 0.00 2.52
149 150 5.596361 TCTTGCCATGAAAAGGTTTGTAGAA 59.404 36.000 0.00 0.00 0.00 2.10
150 151 5.136828 TCTTGCCATGAAAAGGTTTGTAGA 58.863 37.500 0.00 0.00 0.00 2.59
151 152 5.452078 TCTTGCCATGAAAAGGTTTGTAG 57.548 39.130 0.00 0.00 0.00 2.74
152 153 7.716799 ATATCTTGCCATGAAAAGGTTTGTA 57.283 32.000 0.00 0.00 0.00 2.41
153 154 4.961438 ATCTTGCCATGAAAAGGTTTGT 57.039 36.364 0.00 0.00 0.00 2.83
154 155 7.820872 AGAAATATCTTGCCATGAAAAGGTTTG 59.179 33.333 0.00 0.00 29.15 2.93
155 156 7.910584 AGAAATATCTTGCCATGAAAAGGTTT 58.089 30.769 0.00 1.20 29.15 3.27
156 157 7.486407 AGAAATATCTTGCCATGAAAAGGTT 57.514 32.000 0.00 0.00 29.15 3.50
157 158 8.055181 TCTAGAAATATCTTGCCATGAAAAGGT 58.945 33.333 0.00 0.00 37.10 3.50
158 159 8.455903 TCTAGAAATATCTTGCCATGAAAAGG 57.544 34.615 0.00 0.00 37.10 3.11
161 162 8.686334 GGTTTCTAGAAATATCTTGCCATGAAA 58.314 33.333 20.41 0.00 37.10 2.69
162 163 8.055181 AGGTTTCTAGAAATATCTTGCCATGAA 58.945 33.333 20.41 0.00 37.10 2.57
163 164 7.577303 AGGTTTCTAGAAATATCTTGCCATGA 58.423 34.615 20.41 0.00 37.10 3.07
164 165 7.814264 AGGTTTCTAGAAATATCTTGCCATG 57.186 36.000 20.41 0.00 37.10 3.66
165 166 8.829373 AAAGGTTTCTAGAAATATCTTGCCAT 57.171 30.769 20.41 6.02 37.10 4.40
166 167 8.650143 AAAAGGTTTCTAGAAATATCTTGCCA 57.350 30.769 20.41 0.00 37.10 4.92
167 168 9.574458 GAAAAAGGTTTCTAGAAATATCTTGCC 57.426 33.333 20.41 14.38 40.11 4.52
175 176 9.971922 CTTGACATGAAAAAGGTTTCTAGAAAT 57.028 29.630 20.41 3.86 43.13 2.17
176 177 8.413229 CCTTGACATGAAAAAGGTTTCTAGAAA 58.587 33.333 13.99 13.99 43.13 2.52
177 178 7.777910 TCCTTGACATGAAAAAGGTTTCTAGAA 59.222 33.333 18.68 0.00 43.13 2.10
178 179 7.287061 TCCTTGACATGAAAAAGGTTTCTAGA 58.713 34.615 18.68 0.00 43.13 2.43
179 180 7.510549 TCCTTGACATGAAAAAGGTTTCTAG 57.489 36.000 18.68 3.38 43.13 2.43
180 181 7.723616 TGATCCTTGACATGAAAAAGGTTTCTA 59.276 33.333 18.68 6.32 43.13 2.10
181 182 6.550854 TGATCCTTGACATGAAAAAGGTTTCT 59.449 34.615 18.68 8.18 43.13 2.52
182 183 6.748132 TGATCCTTGACATGAAAAAGGTTTC 58.252 36.000 18.68 16.89 43.04 2.78
183 184 6.729690 TGATCCTTGACATGAAAAAGGTTT 57.270 33.333 18.68 11.60 41.12 3.27
184 185 5.279156 GCTGATCCTTGACATGAAAAAGGTT 60.279 40.000 18.68 13.61 41.12 3.50
185 186 4.219288 GCTGATCCTTGACATGAAAAAGGT 59.781 41.667 18.68 10.68 41.12 3.50
186 187 4.461781 AGCTGATCCTTGACATGAAAAAGG 59.538 41.667 15.36 15.36 41.60 3.11
187 188 5.182570 TCAGCTGATCCTTGACATGAAAAAG 59.817 40.000 13.74 0.00 0.00 2.27
188 189 5.072055 TCAGCTGATCCTTGACATGAAAAA 58.928 37.500 13.74 0.00 0.00 1.94
189 190 4.654915 TCAGCTGATCCTTGACATGAAAA 58.345 39.130 13.74 0.00 0.00 2.29
190 191 4.290711 TCAGCTGATCCTTGACATGAAA 57.709 40.909 13.74 0.00 0.00 2.69
191 192 3.986996 TCAGCTGATCCTTGACATGAA 57.013 42.857 13.74 0.00 0.00 2.57
192 193 3.008266 TGTTCAGCTGATCCTTGACATGA 59.992 43.478 19.04 0.00 0.00 3.07
193 194 3.340928 TGTTCAGCTGATCCTTGACATG 58.659 45.455 19.04 0.00 0.00 3.21
194 195 3.708403 TGTTCAGCTGATCCTTGACAT 57.292 42.857 19.04 0.00 0.00 3.06
195 196 3.008266 TCATGTTCAGCTGATCCTTGACA 59.992 43.478 19.04 17.64 0.00 3.58
196 197 3.603532 TCATGTTCAGCTGATCCTTGAC 58.396 45.455 19.04 12.10 0.00 3.18
197 198 3.986996 TCATGTTCAGCTGATCCTTGA 57.013 42.857 19.04 19.57 0.00 3.02
198 199 5.182570 TCTTTTCATGTTCAGCTGATCCTTG 59.817 40.000 19.04 17.79 0.00 3.61
199 200 5.182760 GTCTTTTCATGTTCAGCTGATCCTT 59.817 40.000 19.04 6.85 0.00 3.36
200 201 4.699257 GTCTTTTCATGTTCAGCTGATCCT 59.301 41.667 19.04 7.01 0.00 3.24
201 202 4.142513 GGTCTTTTCATGTTCAGCTGATCC 60.143 45.833 19.04 11.96 0.00 3.36
202 203 4.699257 AGGTCTTTTCATGTTCAGCTGATC 59.301 41.667 19.04 17.54 0.00 2.92
203 204 4.458295 CAGGTCTTTTCATGTTCAGCTGAT 59.542 41.667 19.04 0.00 32.32 2.90
204 205 3.817084 CAGGTCTTTTCATGTTCAGCTGA 59.183 43.478 13.74 13.74 32.32 4.26
205 206 3.817084 TCAGGTCTTTTCATGTTCAGCTG 59.183 43.478 7.63 7.63 0.00 4.24
206 207 4.090761 TCAGGTCTTTTCATGTTCAGCT 57.909 40.909 0.00 0.00 0.00 4.24
207 208 4.836125 TTCAGGTCTTTTCATGTTCAGC 57.164 40.909 0.00 0.00 0.00 4.26
208 209 5.766222 CCTTTCAGGTCTTTTCATGTTCAG 58.234 41.667 0.00 0.00 0.00 3.02
209 210 5.772825 CCTTTCAGGTCTTTTCATGTTCA 57.227 39.130 0.00 0.00 0.00 3.18
223 224 3.392616 ACTATGCCTCCATACCTTTCAGG 59.607 47.826 0.00 0.00 35.68 3.86
224 225 4.696479 ACTATGCCTCCATACCTTTCAG 57.304 45.455 0.00 0.00 32.85 3.02
225 226 5.045213 TGAAACTATGCCTCCATACCTTTCA 60.045 40.000 0.00 0.00 35.55 2.69
226 227 5.437060 TGAAACTATGCCTCCATACCTTTC 58.563 41.667 0.00 0.00 32.40 2.62
227 228 5.450818 TGAAACTATGCCTCCATACCTTT 57.549 39.130 0.00 0.00 32.85 3.11
228 229 5.044846 AGTTGAAACTATGCCTCCATACCTT 60.045 40.000 0.00 0.00 37.52 3.50
229 230 4.475016 AGTTGAAACTATGCCTCCATACCT 59.525 41.667 0.00 0.00 37.52 3.08
230 231 4.781934 AGTTGAAACTATGCCTCCATACC 58.218 43.478 0.00 0.00 37.52 2.73
231 232 5.675538 AGAGTTGAAACTATGCCTCCATAC 58.324 41.667 0.00 0.00 39.88 2.39
232 233 5.425217 TGAGAGTTGAAACTATGCCTCCATA 59.575 40.000 0.00 0.00 39.88 2.74
233 234 4.225942 TGAGAGTTGAAACTATGCCTCCAT 59.774 41.667 0.00 0.00 39.88 3.41
234 235 3.582647 TGAGAGTTGAAACTATGCCTCCA 59.417 43.478 0.00 0.00 39.88 3.86
235 236 4.207891 TGAGAGTTGAAACTATGCCTCC 57.792 45.455 0.00 0.00 39.88 4.30
236 237 4.633565 CCTTGAGAGTTGAAACTATGCCTC 59.366 45.833 0.00 0.00 39.88 4.70
237 238 4.583871 CCTTGAGAGTTGAAACTATGCCT 58.416 43.478 0.00 0.00 39.88 4.75
238 239 3.127721 GCCTTGAGAGTTGAAACTATGCC 59.872 47.826 0.00 0.00 39.88 4.40
239 240 3.127721 GGCCTTGAGAGTTGAAACTATGC 59.872 47.826 0.00 0.00 39.88 3.14
240 241 4.583871 AGGCCTTGAGAGTTGAAACTATG 58.416 43.478 0.00 0.00 39.88 2.23
241 242 4.534103 AGAGGCCTTGAGAGTTGAAACTAT 59.466 41.667 6.77 0.00 39.88 2.12
242 243 3.904339 AGAGGCCTTGAGAGTTGAAACTA 59.096 43.478 6.77 0.00 39.88 2.24
243 244 2.708325 AGAGGCCTTGAGAGTTGAAACT 59.292 45.455 6.77 0.00 43.16 2.66
244 245 3.133141 AGAGGCCTTGAGAGTTGAAAC 57.867 47.619 6.77 0.00 0.00 2.78
245 246 3.864789 AAGAGGCCTTGAGAGTTGAAA 57.135 42.857 6.77 0.00 0.00 2.69
246 247 3.864789 AAAGAGGCCTTGAGAGTTGAA 57.135 42.857 6.77 0.00 31.91 2.69
247 248 3.392616 AGAAAAGAGGCCTTGAGAGTTGA 59.607 43.478 6.77 0.00 31.91 3.18
248 249 3.749226 AGAAAAGAGGCCTTGAGAGTTG 58.251 45.455 6.77 0.00 31.91 3.16
249 250 4.019771 CCTAGAAAAGAGGCCTTGAGAGTT 60.020 45.833 6.77 0.00 31.91 3.01
250 251 3.517500 CCTAGAAAAGAGGCCTTGAGAGT 59.482 47.826 6.77 0.00 31.91 3.24
251 252 3.118445 CCCTAGAAAAGAGGCCTTGAGAG 60.118 52.174 6.77 0.00 32.18 3.20
252 253 2.840651 CCCTAGAAAAGAGGCCTTGAGA 59.159 50.000 6.77 0.00 32.18 3.27
253 254 2.682269 GCCCTAGAAAAGAGGCCTTGAG 60.682 54.545 6.77 0.00 36.22 3.02
254 255 1.282157 GCCCTAGAAAAGAGGCCTTGA 59.718 52.381 6.77 0.00 36.22 3.02
255 256 1.004745 TGCCCTAGAAAAGAGGCCTTG 59.995 52.381 6.77 0.00 39.52 3.61
256 257 1.372501 TGCCCTAGAAAAGAGGCCTT 58.627 50.000 6.77 0.00 39.52 4.35
257 258 1.372501 TTGCCCTAGAAAAGAGGCCT 58.627 50.000 3.86 3.86 39.52 5.19
258 259 2.443958 ATTGCCCTAGAAAAGAGGCC 57.556 50.000 0.00 0.00 39.52 5.19
259 260 3.356290 TGAATTGCCCTAGAAAAGAGGC 58.644 45.455 0.00 0.00 40.24 4.70
260 261 3.379688 GCTGAATTGCCCTAGAAAAGAGG 59.620 47.826 0.00 0.00 0.00 3.69
261 262 4.268359 AGCTGAATTGCCCTAGAAAAGAG 58.732 43.478 0.00 0.00 0.00 2.85
262 263 4.263462 TGAGCTGAATTGCCCTAGAAAAGA 60.263 41.667 0.00 0.00 0.00 2.52
263 264 4.012374 TGAGCTGAATTGCCCTAGAAAAG 58.988 43.478 0.00 0.00 0.00 2.27
264 265 4.032960 TGAGCTGAATTGCCCTAGAAAA 57.967 40.909 0.00 0.00 0.00 2.29
265 266 3.719268 TGAGCTGAATTGCCCTAGAAA 57.281 42.857 0.00 0.00 0.00 2.52
266 267 3.200605 TGATGAGCTGAATTGCCCTAGAA 59.799 43.478 0.00 0.00 0.00 2.10
267 268 2.773661 TGATGAGCTGAATTGCCCTAGA 59.226 45.455 0.00 0.00 0.00 2.43
268 269 3.204306 TGATGAGCTGAATTGCCCTAG 57.796 47.619 0.00 0.00 0.00 3.02
269 270 3.870538 ATGATGAGCTGAATTGCCCTA 57.129 42.857 0.00 0.00 0.00 3.53
270 271 2.693591 CAATGATGAGCTGAATTGCCCT 59.306 45.455 0.00 0.00 0.00 5.19
271 272 2.691526 TCAATGATGAGCTGAATTGCCC 59.308 45.455 0.00 0.00 31.50 5.36
272 273 4.110482 GTTCAATGATGAGCTGAATTGCC 58.890 43.478 0.00 0.00 36.78 4.52
273 274 4.740268 TGTTCAATGATGAGCTGAATTGC 58.260 39.130 0.00 0.00 37.64 3.56
274 275 6.387465 AGTTGTTCAATGATGAGCTGAATTG 58.613 36.000 0.00 0.00 37.64 2.32
275 276 6.208007 TGAGTTGTTCAATGATGAGCTGAATT 59.792 34.615 0.00 0.00 37.64 2.17
276 277 5.708697 TGAGTTGTTCAATGATGAGCTGAAT 59.291 36.000 0.00 0.00 37.64 2.57
277 278 5.065235 TGAGTTGTTCAATGATGAGCTGAA 58.935 37.500 0.00 0.00 37.64 3.02
278 279 4.644498 TGAGTTGTTCAATGATGAGCTGA 58.356 39.130 0.00 0.00 37.64 4.26
279 280 5.048921 AGTTGAGTTGTTCAATGATGAGCTG 60.049 40.000 0.00 0.00 46.85 4.24
280 281 5.068636 AGTTGAGTTGTTCAATGATGAGCT 58.931 37.500 0.00 0.00 46.85 4.09
281 282 5.368256 AGTTGAGTTGTTCAATGATGAGC 57.632 39.130 0.00 0.00 46.85 4.26
286 287 8.946085 GGTCATATAAGTTGAGTTGTTCAATGA 58.054 33.333 0.00 0.00 46.85 2.57
287 288 8.729756 TGGTCATATAAGTTGAGTTGTTCAATG 58.270 33.333 0.00 0.00 46.85 2.82
288 289 8.862325 TGGTCATATAAGTTGAGTTGTTCAAT 57.138 30.769 0.00 0.00 46.85 2.57
289 290 8.684386 TTGGTCATATAAGTTGAGTTGTTCAA 57.316 30.769 0.00 0.00 43.40 2.69
290 291 8.564574 GTTTGGTCATATAAGTTGAGTTGTTCA 58.435 33.333 0.00 0.00 0.00 3.18
291 292 8.564574 TGTTTGGTCATATAAGTTGAGTTGTTC 58.435 33.333 0.00 0.00 0.00 3.18
292 293 8.458573 TGTTTGGTCATATAAGTTGAGTTGTT 57.541 30.769 0.00 0.00 0.00 2.83
293 294 8.514594 CATGTTTGGTCATATAAGTTGAGTTGT 58.485 33.333 0.00 0.00 0.00 3.32
294 295 8.729756 TCATGTTTGGTCATATAAGTTGAGTTG 58.270 33.333 0.00 0.00 0.00 3.16
295 296 8.862325 TCATGTTTGGTCATATAAGTTGAGTT 57.138 30.769 0.00 0.00 0.00 3.01
296 297 8.730680 GTTCATGTTTGGTCATATAAGTTGAGT 58.269 33.333 0.00 0.00 0.00 3.41
297 298 8.729756 TGTTCATGTTTGGTCATATAAGTTGAG 58.270 33.333 0.00 0.00 0.00 3.02
298 299 8.511321 GTGTTCATGTTTGGTCATATAAGTTGA 58.489 33.333 0.00 0.00 0.00 3.18
299 300 8.514594 AGTGTTCATGTTTGGTCATATAAGTTG 58.485 33.333 0.00 0.00 0.00 3.16
300 301 8.635765 AGTGTTCATGTTTGGTCATATAAGTT 57.364 30.769 0.00 0.00 0.00 2.66
301 302 9.162764 GTAGTGTTCATGTTTGGTCATATAAGT 57.837 33.333 0.00 0.00 0.00 2.24
302 303 8.612619 GGTAGTGTTCATGTTTGGTCATATAAG 58.387 37.037 0.00 0.00 0.00 1.73
303 304 8.325787 AGGTAGTGTTCATGTTTGGTCATATAA 58.674 33.333 0.00 0.00 0.00 0.98
304 305 7.857456 AGGTAGTGTTCATGTTTGGTCATATA 58.143 34.615 0.00 0.00 0.00 0.86
305 306 6.721318 AGGTAGTGTTCATGTTTGGTCATAT 58.279 36.000 0.00 0.00 0.00 1.78
306 307 6.121776 AGGTAGTGTTCATGTTTGGTCATA 57.878 37.500 0.00 0.00 0.00 2.15
307 308 4.985538 AGGTAGTGTTCATGTTTGGTCAT 58.014 39.130 0.00 0.00 0.00 3.06
308 309 4.431416 AGGTAGTGTTCATGTTTGGTCA 57.569 40.909 0.00 0.00 0.00 4.02
309 310 5.063880 AGAAGGTAGTGTTCATGTTTGGTC 58.936 41.667 0.00 0.00 0.00 4.02
310 311 5.048846 AGAAGGTAGTGTTCATGTTTGGT 57.951 39.130 0.00 0.00 0.00 3.67
311 312 4.455877 GGAGAAGGTAGTGTTCATGTTTGG 59.544 45.833 0.00 0.00 0.00 3.28
312 313 5.308825 AGGAGAAGGTAGTGTTCATGTTTG 58.691 41.667 0.00 0.00 0.00 2.93
313 314 5.568620 AGGAGAAGGTAGTGTTCATGTTT 57.431 39.130 0.00 0.00 0.00 2.83
314 315 5.552178 GAAGGAGAAGGTAGTGTTCATGTT 58.448 41.667 0.00 0.00 0.00 2.71
315 316 4.322049 CGAAGGAGAAGGTAGTGTTCATGT 60.322 45.833 0.00 0.00 0.00 3.21
316 317 4.177026 CGAAGGAGAAGGTAGTGTTCATG 58.823 47.826 0.00 0.00 0.00 3.07
317 318 4.457834 CGAAGGAGAAGGTAGTGTTCAT 57.542 45.455 0.00 0.00 0.00 2.57
318 319 3.936372 CGAAGGAGAAGGTAGTGTTCA 57.064 47.619 0.00 0.00 0.00 3.18
334 335 1.221466 TTGCGAGTGTTCAGCCGAAG 61.221 55.000 0.00 0.00 0.00 3.79
335 336 1.227409 TTGCGAGTGTTCAGCCGAA 60.227 52.632 0.00 0.00 0.00 4.30
336 337 1.954146 GTTGCGAGTGTTCAGCCGA 60.954 57.895 0.00 0.00 0.00 5.54
337 338 2.551270 GTTGCGAGTGTTCAGCCG 59.449 61.111 0.00 0.00 0.00 5.52
338 339 1.444119 TTGGTTGCGAGTGTTCAGCC 61.444 55.000 0.00 0.00 34.65 4.85
339 340 0.380378 TTTGGTTGCGAGTGTTCAGC 59.620 50.000 0.00 0.00 0.00 4.26
340 341 2.842208 TTTTGGTTGCGAGTGTTCAG 57.158 45.000 0.00 0.00 0.00 3.02
358 359 1.468520 CACGATCATGGGTCGCTTTTT 59.531 47.619 17.47 0.23 42.56 1.94
359 360 1.086696 CACGATCATGGGTCGCTTTT 58.913 50.000 17.47 0.53 42.56 2.27
360 361 0.036388 ACACGATCATGGGTCGCTTT 60.036 50.000 17.47 3.77 42.56 3.51
361 362 0.821517 TACACGATCATGGGTCGCTT 59.178 50.000 17.47 9.66 42.56 4.68
362 363 0.821517 TTACACGATCATGGGTCGCT 59.178 50.000 17.47 8.56 42.56 4.93
363 364 1.326548 GTTTACACGATCATGGGTCGC 59.673 52.381 17.47 1.67 42.56 5.19
386 387 4.139786 TCTAGAAGGCATGGAAATGATGC 58.860 43.478 0.00 0.00 44.65 3.91
388 389 7.722949 TTTTTCTAGAAGGCATGGAAATGAT 57.277 32.000 5.12 0.00 0.00 2.45
413 414 4.646492 CAGCTATTTATGGCAGGGTCTTTT 59.354 41.667 0.00 0.00 36.66 2.27
418 419 3.555966 GTTCAGCTATTTATGGCAGGGT 58.444 45.455 0.00 0.00 36.66 4.34
420 421 2.549754 CCGTTCAGCTATTTATGGCAGG 59.450 50.000 0.00 0.00 36.66 4.85
434 435 4.854399 TGTATTTGACTTTTGCCGTTCAG 58.146 39.130 0.00 0.00 0.00 3.02
453 454 9.829507 GGTTTGATCTAGAGTAGTACTACTGTA 57.170 37.037 34.67 31.28 45.63 2.74
454 455 7.495279 CGGTTTGATCTAGAGTAGTACTACTGT 59.505 40.741 34.67 31.79 45.63 3.55
455 456 7.041916 CCGGTTTGATCTAGAGTAGTACTACTG 60.042 44.444 34.67 22.20 45.63 2.74
457 458 6.765512 ACCGGTTTGATCTAGAGTAGTACTAC 59.234 42.308 23.03 23.03 36.35 2.73
458 459 6.765036 CACCGGTTTGATCTAGAGTAGTACTA 59.235 42.308 2.97 0.00 0.00 1.82
459 460 5.589452 CACCGGTTTGATCTAGAGTAGTACT 59.411 44.000 2.97 1.37 0.00 2.73
460 461 5.221009 CCACCGGTTTGATCTAGAGTAGTAC 60.221 48.000 2.97 0.00 0.00 2.73
487 488 3.704061 AGCTAAAAGTTGCTTGTTTGGGA 59.296 39.130 0.00 0.00 35.86 4.37
512 514 1.409064 TGGATGGATGTGTACGAGCTC 59.591 52.381 2.73 2.73 0.00 4.09
529 531 2.576832 GGTTCGAGGTTCCGGTGGA 61.577 63.158 0.00 0.00 0.00 4.02
535 537 3.119096 GCAGCGGTTCGAGGTTCC 61.119 66.667 0.00 0.00 0.00 3.62
573 575 8.948401 TCTATCTATCTATCTGGCTTCTGTTT 57.052 34.615 0.00 0.00 0.00 2.83
624 626 1.526575 CGGTGCATGGGCTCTGTTTT 61.527 55.000 0.00 0.00 41.91 2.43
625 627 1.973281 CGGTGCATGGGCTCTGTTT 60.973 57.895 0.00 0.00 41.91 2.83
626 628 2.360350 CGGTGCATGGGCTCTGTT 60.360 61.111 0.00 0.00 41.91 3.16
851 862 4.787280 CCGGTGGGAGGAGGAGCT 62.787 72.222 0.00 0.00 34.06 4.09
856 867 2.765807 ATCTGCCGGTGGGAGGAG 60.766 66.667 1.90 0.00 41.64 3.69
977 988 1.683943 ACGATCAATCAATGGCCTGG 58.316 50.000 3.32 0.00 0.00 4.45
982 993 3.551454 GCCATCCAACGATCAATCAATGG 60.551 47.826 8.38 8.38 36.37 3.16
984 995 2.291465 CGCCATCCAACGATCAATCAAT 59.709 45.455 0.00 0.00 0.00 2.57
985 996 1.670295 CGCCATCCAACGATCAATCAA 59.330 47.619 0.00 0.00 0.00 2.57
986 997 1.298602 CGCCATCCAACGATCAATCA 58.701 50.000 0.00 0.00 0.00 2.57
987 998 0.588252 CCGCCATCCAACGATCAATC 59.412 55.000 0.00 0.00 0.00 2.67
1092 1103 4.409218 TCGTCGCGCACCCTGTAC 62.409 66.667 8.75 0.00 0.00 2.90
1834 1869 5.836347 TGTACTGCAATGTAAACATGCAAA 58.164 33.333 15.83 8.58 38.70 3.68
1883 1918 3.155167 GGTAGACGGCTCCCCCTG 61.155 72.222 0.00 0.00 0.00 4.45
1884 1919 1.587522 TAAGGTAGACGGCTCCCCCT 61.588 60.000 0.00 0.00 0.00 4.79
1885 1920 0.471401 ATAAGGTAGACGGCTCCCCC 60.471 60.000 0.00 0.00 0.00 5.40
1886 1921 0.680061 CATAAGGTAGACGGCTCCCC 59.320 60.000 0.00 0.00 0.00 4.81
1887 1922 0.033642 GCATAAGGTAGACGGCTCCC 59.966 60.000 0.00 0.00 0.00 4.30
1888 1923 1.000052 GAGCATAAGGTAGACGGCTCC 60.000 57.143 0.00 0.00 41.31 4.70
1889 1924 1.000052 GGAGCATAAGGTAGACGGCTC 60.000 57.143 0.00 0.00 45.18 4.70
1890 1925 1.041437 GGAGCATAAGGTAGACGGCT 58.959 55.000 0.00 0.00 0.00 5.52
1891 1926 0.318784 CGGAGCATAAGGTAGACGGC 60.319 60.000 0.00 0.00 0.00 5.68
1892 1927 0.314302 CCGGAGCATAAGGTAGACGG 59.686 60.000 0.00 0.00 33.17 4.79
1893 1928 0.318784 GCCGGAGCATAAGGTAGACG 60.319 60.000 5.05 0.00 39.53 4.18
1894 1929 1.041437 AGCCGGAGCATAAGGTAGAC 58.959 55.000 5.05 0.00 43.56 2.59
1895 1930 1.789523 AAGCCGGAGCATAAGGTAGA 58.210 50.000 5.05 0.00 43.56 2.59
1896 1931 3.746045 TTAAGCCGGAGCATAAGGTAG 57.254 47.619 5.05 0.00 43.56 3.18
1897 1932 4.638304 GATTTAAGCCGGAGCATAAGGTA 58.362 43.478 5.05 0.00 43.56 3.08
1898 1933 3.477530 GATTTAAGCCGGAGCATAAGGT 58.522 45.455 5.05 0.00 43.56 3.50
1899 1934 2.480419 CGATTTAAGCCGGAGCATAAGG 59.520 50.000 5.05 0.00 43.56 2.69
1900 1935 3.795561 CGATTTAAGCCGGAGCATAAG 57.204 47.619 5.05 0.00 43.56 1.73
1909 1944 4.545823 TTTATCTTGCCGATTTAAGCCG 57.454 40.909 0.00 0.00 33.48 5.52
1929 1964 3.441572 CCATCTCCGACATGCTTCTTTTT 59.558 43.478 0.00 0.00 0.00 1.94
1930 1965 3.012518 CCATCTCCGACATGCTTCTTTT 58.987 45.455 0.00 0.00 0.00 2.27
1931 1966 2.026822 ACCATCTCCGACATGCTTCTTT 60.027 45.455 0.00 0.00 0.00 2.52
1932 1967 1.556911 ACCATCTCCGACATGCTTCTT 59.443 47.619 0.00 0.00 0.00 2.52
1933 1968 1.198713 ACCATCTCCGACATGCTTCT 58.801 50.000 0.00 0.00 0.00 2.85
1934 1969 2.029838 AACCATCTCCGACATGCTTC 57.970 50.000 0.00 0.00 0.00 3.86
1935 1970 2.236146 TGTAACCATCTCCGACATGCTT 59.764 45.455 0.00 0.00 0.00 3.91
1936 1971 1.831106 TGTAACCATCTCCGACATGCT 59.169 47.619 0.00 0.00 0.00 3.79
1937 1972 2.309528 TGTAACCATCTCCGACATGC 57.690 50.000 0.00 0.00 0.00 4.06
1938 1973 3.062099 CGTTTGTAACCATCTCCGACATG 59.938 47.826 0.00 0.00 0.00 3.21
1939 1974 3.259064 CGTTTGTAACCATCTCCGACAT 58.741 45.455 0.00 0.00 0.00 3.06
1940 1975 2.036217 ACGTTTGTAACCATCTCCGACA 59.964 45.455 0.00 0.00 0.00 4.35
1941 1976 2.665052 GACGTTTGTAACCATCTCCGAC 59.335 50.000 0.00 0.00 0.00 4.79
1942 1977 2.669113 CGACGTTTGTAACCATCTCCGA 60.669 50.000 0.00 0.00 0.00 4.55
1943 1978 1.652124 CGACGTTTGTAACCATCTCCG 59.348 52.381 0.00 0.00 0.00 4.63
1944 1979 1.997606 CCGACGTTTGTAACCATCTCC 59.002 52.381 0.00 0.00 0.00 3.71
1945 1980 2.680577 ACCGACGTTTGTAACCATCTC 58.319 47.619 0.00 0.00 0.00 2.75
1946 1981 2.803956 CAACCGACGTTTGTAACCATCT 59.196 45.455 0.00 0.00 0.00 2.90
1947 1982 2.801679 TCAACCGACGTTTGTAACCATC 59.198 45.455 4.99 0.00 0.00 3.51
1948 1983 2.836262 TCAACCGACGTTTGTAACCAT 58.164 42.857 4.99 0.00 0.00 3.55
1949 1984 2.306341 TCAACCGACGTTTGTAACCA 57.694 45.000 4.99 0.00 0.00 3.67
1950 1985 2.159934 CGATCAACCGACGTTTGTAACC 60.160 50.000 4.99 0.00 0.00 2.85
1951 1986 2.725723 TCGATCAACCGACGTTTGTAAC 59.274 45.455 4.99 0.00 33.14 2.50
1952 1987 3.010624 TCGATCAACCGACGTTTGTAA 57.989 42.857 4.99 0.00 33.14 2.41
1953 1988 2.702898 TCGATCAACCGACGTTTGTA 57.297 45.000 4.99 0.00 33.14 2.41
1954 1989 3.573569 TCGATCAACCGACGTTTGT 57.426 47.368 4.99 0.00 33.14 2.83
1961 1996 2.425668 TGCTCTAATGTCGATCAACCGA 59.574 45.455 0.00 0.00 36.06 4.69
1962 1997 2.809446 TGCTCTAATGTCGATCAACCG 58.191 47.619 0.00 0.00 0.00 4.44
1963 1998 4.626042 AGATGCTCTAATGTCGATCAACC 58.374 43.478 0.00 0.00 0.00 3.77
1964 1999 4.683781 GGAGATGCTCTAATGTCGATCAAC 59.316 45.833 0.00 0.00 0.00 3.18
1965 2000 4.557496 CGGAGATGCTCTAATGTCGATCAA 60.557 45.833 0.00 0.00 0.00 2.57
1966 2001 3.057946 CGGAGATGCTCTAATGTCGATCA 60.058 47.826 0.00 0.00 0.00 2.92
1967 2002 3.497118 CGGAGATGCTCTAATGTCGATC 58.503 50.000 0.00 0.00 0.00 3.69
1968 2003 2.230025 CCGGAGATGCTCTAATGTCGAT 59.770 50.000 0.00 0.00 0.00 3.59
1969 2004 1.609072 CCGGAGATGCTCTAATGTCGA 59.391 52.381 0.00 0.00 0.00 4.20
1970 2005 1.932604 GCCGGAGATGCTCTAATGTCG 60.933 57.143 5.05 0.00 0.00 4.35
1971 2006 1.606737 GGCCGGAGATGCTCTAATGTC 60.607 57.143 5.05 0.00 0.00 3.06
1972 2007 0.394565 GGCCGGAGATGCTCTAATGT 59.605 55.000 5.05 0.00 0.00 2.71
1973 2008 0.668706 CGGCCGGAGATGCTCTAATG 60.669 60.000 20.10 0.00 0.00 1.90
1974 2009 1.668294 CGGCCGGAGATGCTCTAAT 59.332 57.895 20.10 0.00 0.00 1.73
1975 2010 3.129300 CGGCCGGAGATGCTCTAA 58.871 61.111 20.10 0.00 0.00 2.10
1976 2011 3.606662 GCGGCCGGAGATGCTCTA 61.607 66.667 29.38 0.00 0.00 2.43
2029 2064 4.410400 GTCTTGGGGGTGCGAGGG 62.410 72.222 0.00 0.00 0.00 4.30
2030 2065 3.636231 TGTCTTGGGGGTGCGAGG 61.636 66.667 0.00 0.00 0.00 4.63
2031 2066 2.358737 GTGTCTTGGGGGTGCGAG 60.359 66.667 0.00 0.00 0.00 5.03
2032 2067 3.948719 GGTGTCTTGGGGGTGCGA 61.949 66.667 0.00 0.00 0.00 5.10
2034 2069 2.969300 TTTCGGTGTCTTGGGGGTGC 62.969 60.000 0.00 0.00 0.00 5.01
2035 2070 0.251165 ATTTCGGTGTCTTGGGGGTG 60.251 55.000 0.00 0.00 0.00 4.61
2036 2071 0.037734 GATTTCGGTGTCTTGGGGGT 59.962 55.000 0.00 0.00 0.00 4.95
2037 2072 0.679960 GGATTTCGGTGTCTTGGGGG 60.680 60.000 0.00 0.00 0.00 5.40
2038 2073 1.024579 CGGATTTCGGTGTCTTGGGG 61.025 60.000 0.00 0.00 34.75 4.96
2039 2074 1.644786 GCGGATTTCGGTGTCTTGGG 61.645 60.000 0.00 0.00 39.69 4.12
2040 2075 1.644786 GGCGGATTTCGGTGTCTTGG 61.645 60.000 0.00 0.00 39.69 3.61
2041 2076 1.794222 GGCGGATTTCGGTGTCTTG 59.206 57.895 0.00 0.00 39.69 3.02
2042 2077 1.740296 CGGCGGATTTCGGTGTCTT 60.740 57.895 0.00 0.00 39.69 3.01
2043 2078 2.125673 CGGCGGATTTCGGTGTCT 60.126 61.111 0.00 0.00 39.69 3.41
2044 2079 3.192922 CCGGCGGATTTCGGTGTC 61.193 66.667 24.41 0.00 41.23 3.67
2061 2096 4.050934 CCCAAAAACGGGCCGAGC 62.051 66.667 35.78 0.00 40.07 5.03
2070 2105 3.350909 GATCGCCGGGCCCAAAAAC 62.351 63.158 24.92 4.37 0.00 2.43
2071 2106 3.065567 GATCGCCGGGCCCAAAAA 61.066 61.111 24.92 4.19 0.00 1.94
2085 2120 4.467084 TGGGTTCGGCCTGCGATC 62.467 66.667 0.00 0.00 37.43 3.69
2086 2121 4.473520 CTGGGTTCGGCCTGCGAT 62.474 66.667 0.00 0.00 37.43 4.58
2094 2129 4.680237 TCAGTGCGCTGGGTTCGG 62.680 66.667 26.23 0.00 42.78 4.30
2095 2130 3.114616 CTCAGTGCGCTGGGTTCG 61.115 66.667 26.23 7.15 42.78 3.95
2096 2131 2.743928 CCTCAGTGCGCTGGGTTC 60.744 66.667 24.98 0.00 41.59 3.62
2097 2132 4.335647 CCCTCAGTGCGCTGGGTT 62.336 66.667 24.98 0.00 41.59 4.11
2125 2160 4.715523 TTTCCCCTTGCGCCGGAG 62.716 66.667 5.05 1.55 0.00 4.63
2126 2161 4.272511 TTTTCCCCTTGCGCCGGA 62.273 61.111 5.05 6.47 0.00 5.14
2127 2162 4.050934 GTTTTCCCCTTGCGCCGG 62.051 66.667 4.18 5.21 0.00 6.13
2128 2163 3.291383 TGTTTTCCCCTTGCGCCG 61.291 61.111 4.18 0.00 0.00 6.46
2129 2164 2.338620 GTGTTTTCCCCTTGCGCC 59.661 61.111 4.18 0.00 0.00 6.53
2130 2165 2.050442 CGTGTTTTCCCCTTGCGC 60.050 61.111 0.00 0.00 0.00 6.09
2131 2166 2.050442 GCGTGTTTTCCCCTTGCG 60.050 61.111 0.00 0.00 0.00 4.85
2132 2167 0.597377 CAAGCGTGTTTTCCCCTTGC 60.597 55.000 0.00 0.00 0.00 4.01
2133 2168 0.031994 CCAAGCGTGTTTTCCCCTTG 59.968 55.000 0.00 0.00 34.26 3.61
2134 2169 1.112916 CCCAAGCGTGTTTTCCCCTT 61.113 55.000 0.00 0.00 0.00 3.95
2135 2170 1.530655 CCCAAGCGTGTTTTCCCCT 60.531 57.895 0.00 0.00 0.00 4.79
2136 2171 3.047735 CCCAAGCGTGTTTTCCCC 58.952 61.111 0.00 0.00 0.00 4.81
2137 2172 2.022240 TTGCCCAAGCGTGTTTTCCC 62.022 55.000 0.00 0.00 44.31 3.97
2138 2173 0.874175 GTTGCCCAAGCGTGTTTTCC 60.874 55.000 0.00 0.00 44.31 3.13
2139 2174 0.179124 TGTTGCCCAAGCGTGTTTTC 60.179 50.000 0.00 0.00 44.31 2.29
2140 2175 0.459411 GTGTTGCCCAAGCGTGTTTT 60.459 50.000 0.00 0.00 44.31 2.43
2141 2176 1.140804 GTGTTGCCCAAGCGTGTTT 59.859 52.632 0.00 0.00 44.31 2.83
2142 2177 2.781158 GGTGTTGCCCAAGCGTGTT 61.781 57.895 0.00 0.00 44.31 3.32
2143 2178 3.216292 GGTGTTGCCCAAGCGTGT 61.216 61.111 0.00 0.00 44.31 4.49
2144 2179 4.326766 CGGTGTTGCCCAAGCGTG 62.327 66.667 0.00 0.00 44.31 5.34
2145 2180 4.868116 ACGGTGTTGCCCAAGCGT 62.868 61.111 1.63 1.63 44.86 5.07
2146 2181 4.025401 GACGGTGTTGCCCAAGCG 62.025 66.667 0.00 0.00 44.31 4.68
2147 2182 2.268076 ATGACGGTGTTGCCCAAGC 61.268 57.895 0.00 0.00 40.48 4.01
2148 2183 0.888736 TCATGACGGTGTTGCCCAAG 60.889 55.000 0.00 0.00 0.00 3.61
2149 2184 0.888736 CTCATGACGGTGTTGCCCAA 60.889 55.000 0.00 0.00 0.00 4.12
2150 2185 1.302431 CTCATGACGGTGTTGCCCA 60.302 57.895 0.00 0.00 0.00 5.36
2151 2186 0.605319 TTCTCATGACGGTGTTGCCC 60.605 55.000 0.00 0.00 0.00 5.36
2152 2187 1.234821 TTTCTCATGACGGTGTTGCC 58.765 50.000 0.00 0.00 0.00 4.52
2153 2188 2.290641 ACTTTTCTCATGACGGTGTTGC 59.709 45.455 0.00 0.00 0.00 4.17
2154 2189 3.559655 TGACTTTTCTCATGACGGTGTTG 59.440 43.478 0.00 0.00 0.00 3.33
2155 2190 3.804036 TGACTTTTCTCATGACGGTGTT 58.196 40.909 0.00 0.00 0.00 3.32
2156 2191 3.469008 TGACTTTTCTCATGACGGTGT 57.531 42.857 0.00 0.00 0.00 4.16
2157 2192 3.364366 GCTTGACTTTTCTCATGACGGTG 60.364 47.826 0.00 0.00 0.00 4.94
2158 2193 2.808543 GCTTGACTTTTCTCATGACGGT 59.191 45.455 0.00 0.00 0.00 4.83
2159 2194 2.160417 GGCTTGACTTTTCTCATGACGG 59.840 50.000 0.00 0.00 0.00 4.79
2160 2195 2.807967 TGGCTTGACTTTTCTCATGACG 59.192 45.455 0.00 0.00 0.00 4.35
2161 2196 4.836125 TTGGCTTGACTTTTCTCATGAC 57.164 40.909 0.00 0.00 0.00 3.06
2162 2197 4.154737 CGATTGGCTTGACTTTTCTCATGA 59.845 41.667 0.00 0.00 0.00 3.07
2163 2198 4.083110 ACGATTGGCTTGACTTTTCTCATG 60.083 41.667 0.00 0.00 0.00 3.07
2164 2199 4.074970 ACGATTGGCTTGACTTTTCTCAT 58.925 39.130 0.00 0.00 0.00 2.90
2165 2200 3.476552 ACGATTGGCTTGACTTTTCTCA 58.523 40.909 0.00 0.00 0.00 3.27
2166 2201 3.120165 GGACGATTGGCTTGACTTTTCTC 60.120 47.826 0.00 0.00 0.00 2.87
2167 2202 2.814336 GGACGATTGGCTTGACTTTTCT 59.186 45.455 0.00 0.00 0.00 2.52
2168 2203 2.552315 TGGACGATTGGCTTGACTTTTC 59.448 45.455 0.00 0.00 0.00 2.29
2169 2204 2.554032 CTGGACGATTGGCTTGACTTTT 59.446 45.455 0.00 0.00 0.00 2.27
2170 2205 2.154462 CTGGACGATTGGCTTGACTTT 58.846 47.619 0.00 0.00 0.00 2.66
2171 2206 1.347707 TCTGGACGATTGGCTTGACTT 59.652 47.619 0.00 0.00 0.00 3.01
2172 2207 0.976641 TCTGGACGATTGGCTTGACT 59.023 50.000 0.00 0.00 0.00 3.41
2173 2208 2.029838 ATCTGGACGATTGGCTTGAC 57.970 50.000 0.00 0.00 0.00 3.18
2174 2209 2.632377 GAATCTGGACGATTGGCTTGA 58.368 47.619 0.00 0.00 42.31 3.02
2175 2210 1.328680 CGAATCTGGACGATTGGCTTG 59.671 52.381 0.00 0.00 42.31 4.01
2176 2211 1.656652 CGAATCTGGACGATTGGCTT 58.343 50.000 0.00 0.00 42.31 4.35
2177 2212 3.369381 CGAATCTGGACGATTGGCT 57.631 52.632 0.00 0.00 42.31 4.75
2179 2214 1.160329 GGGCGAATCTGGACGATTGG 61.160 60.000 0.00 0.00 42.31 3.16
2180 2215 1.160329 GGGGCGAATCTGGACGATTG 61.160 60.000 0.00 0.00 42.31 2.67
2181 2216 1.146263 GGGGCGAATCTGGACGATT 59.854 57.895 0.00 0.00 44.87 3.34
2182 2217 2.808206 GGGGGCGAATCTGGACGAT 61.808 63.158 0.00 0.00 0.00 3.73
2183 2218 3.467226 GGGGGCGAATCTGGACGA 61.467 66.667 0.00 0.00 0.00 4.20
2184 2219 3.781307 TGGGGGCGAATCTGGACG 61.781 66.667 0.00 0.00 0.00 4.79
2185 2220 2.124695 GTGGGGGCGAATCTGGAC 60.125 66.667 0.00 0.00 0.00 4.02
2186 2221 3.407967 GGTGGGGGCGAATCTGGA 61.408 66.667 0.00 0.00 0.00 3.86
2187 2222 4.506255 GGGTGGGGGCGAATCTGG 62.506 72.222 0.00 0.00 0.00 3.86
2188 2223 4.506255 GGGGTGGGGGCGAATCTG 62.506 72.222 0.00 0.00 0.00 2.90
2216 2251 4.740822 ATCGGCAAGGTGGTGGCC 62.741 66.667 0.00 0.00 44.27 5.36
2217 2252 3.134127 GATCGGCAAGGTGGTGGC 61.134 66.667 0.00 0.00 40.55 5.01
2218 2253 2.438434 GGATCGGCAAGGTGGTGG 60.438 66.667 0.00 0.00 0.00 4.61
2219 2254 2.438434 GGGATCGGCAAGGTGGTG 60.438 66.667 0.00 0.00 0.00 4.17
2220 2255 4.096003 CGGGATCGGCAAGGTGGT 62.096 66.667 0.00 0.00 0.00 4.16
2249 2284 4.227134 ATCTAGCGGTGCTGGGCG 62.227 66.667 0.00 0.00 40.10 6.13
2250 2285 2.280457 GATCTAGCGGTGCTGGGC 60.280 66.667 0.00 0.00 40.10 5.36
2251 2286 2.028190 CGATCTAGCGGTGCTGGG 59.972 66.667 0.00 0.00 40.10 4.45
2252 2287 2.028190 CCGATCTAGCGGTGCTGG 59.972 66.667 0.00 0.00 46.07 4.85
2259 2294 1.374758 GGGAATGGCCGATCTAGCG 60.375 63.158 0.00 0.00 37.63 4.26
2260 2295 1.003233 GGGGAATGGCCGATCTAGC 60.003 63.158 0.00 0.00 37.63 3.42
2261 2296 1.293498 CGGGGAATGGCCGATCTAG 59.707 63.158 0.00 0.00 37.63 2.43
2262 2297 2.879233 GCGGGGAATGGCCGATCTA 61.879 63.158 0.00 0.00 37.63 1.98
2263 2298 4.256180 GCGGGGAATGGCCGATCT 62.256 66.667 0.00 0.00 37.63 2.75
2274 2309 2.605295 TCTCTTTTCCGGCGGGGA 60.605 61.111 27.98 17.21 45.40 4.81
2275 2310 2.125106 CTCTCTTTTCCGGCGGGG 60.125 66.667 27.98 13.85 37.02 5.73
2276 2311 0.741221 CTTCTCTCTTTTCCGGCGGG 60.741 60.000 27.98 10.15 0.00 6.13
2277 2312 0.741221 CCTTCTCTCTTTTCCGGCGG 60.741 60.000 22.51 22.51 0.00 6.13
2278 2313 0.037232 ACCTTCTCTCTTTTCCGGCG 60.037 55.000 0.00 0.00 0.00 6.46
2279 2314 2.186532 AACCTTCTCTCTTTTCCGGC 57.813 50.000 0.00 0.00 0.00 6.13
2280 2315 3.304726 GCAAAACCTTCTCTCTTTTCCGG 60.305 47.826 0.00 0.00 0.00 5.14
2281 2316 3.304726 GGCAAAACCTTCTCTCTTTTCCG 60.305 47.826 0.00 0.00 34.51 4.30
2282 2317 3.636764 TGGCAAAACCTTCTCTCTTTTCC 59.363 43.478 0.00 0.00 40.22 3.13
2283 2318 4.611943 GTGGCAAAACCTTCTCTCTTTTC 58.388 43.478 0.00 0.00 40.22 2.29
2284 2319 3.066760 CGTGGCAAAACCTTCTCTCTTTT 59.933 43.478 0.00 0.00 40.22 2.27
2285 2320 2.618709 CGTGGCAAAACCTTCTCTCTTT 59.381 45.455 0.00 0.00 40.22 2.52
2286 2321 2.222027 CGTGGCAAAACCTTCTCTCTT 58.778 47.619 0.00 0.00 40.22 2.85
2287 2322 1.543429 CCGTGGCAAAACCTTCTCTCT 60.543 52.381 0.00 0.00 40.22 3.10
2288 2323 0.875059 CCGTGGCAAAACCTTCTCTC 59.125 55.000 0.00 0.00 40.22 3.20
2289 2324 1.172812 GCCGTGGCAAAACCTTCTCT 61.173 55.000 5.89 0.00 41.49 3.10
2290 2325 1.285950 GCCGTGGCAAAACCTTCTC 59.714 57.895 5.89 0.00 41.49 2.87
2291 2326 3.443588 GCCGTGGCAAAACCTTCT 58.556 55.556 5.89 0.00 41.49 2.85
2302 2337 4.767255 GTGGAGAGGCTGCCGTGG 62.767 72.222 13.96 0.00 0.00 4.94
2303 2338 4.767255 GGTGGAGAGGCTGCCGTG 62.767 72.222 13.96 0.00 0.00 4.94
2305 2340 4.767255 GTGGTGGAGAGGCTGCCG 62.767 72.222 13.96 0.00 0.00 5.69
2306 2341 4.416738 GGTGGTGGAGAGGCTGCC 62.417 72.222 11.65 11.65 0.00 4.85
2307 2342 4.767255 CGGTGGTGGAGAGGCTGC 62.767 72.222 0.00 0.00 0.00 5.25
2308 2343 3.302347 GACGGTGGTGGAGAGGCTG 62.302 68.421 0.00 0.00 0.00 4.85
2309 2344 2.997897 GACGGTGGTGGAGAGGCT 60.998 66.667 0.00 0.00 0.00 4.58
2310 2345 4.083862 GGACGGTGGTGGAGAGGC 62.084 72.222 0.00 0.00 0.00 4.70
2311 2346 3.760035 CGGACGGTGGTGGAGAGG 61.760 72.222 0.00 0.00 0.00 3.69
2312 2347 2.675423 TCGGACGGTGGTGGAGAG 60.675 66.667 0.00 0.00 0.00 3.20
2313 2348 2.675423 CTCGGACGGTGGTGGAGA 60.675 66.667 0.00 0.00 0.00 3.71
2314 2349 4.436998 GCTCGGACGGTGGTGGAG 62.437 72.222 0.00 0.00 0.00 3.86
2317 2352 4.778415 CTCGCTCGGACGGTGGTG 62.778 72.222 0.00 0.00 0.00 4.17
2319 2354 3.569049 AAACTCGCTCGGACGGTGG 62.569 63.158 0.00 0.00 0.00 4.61
2320 2355 1.615107 GAAAACTCGCTCGGACGGTG 61.615 60.000 0.00 0.00 0.00 4.94
2321 2356 1.372623 GAAAACTCGCTCGGACGGT 60.373 57.895 0.00 0.00 0.00 4.83
2322 2357 2.092882 GGAAAACTCGCTCGGACGG 61.093 63.158 0.00 0.00 0.00 4.79
2323 2358 2.434134 CGGAAAACTCGCTCGGACG 61.434 63.158 0.00 0.00 0.00 4.79
2324 2359 3.460144 CGGAAAACTCGCTCGGAC 58.540 61.111 0.00 0.00 0.00 4.79
2331 2366 3.488090 GGAGCGGCGGAAAACTCG 61.488 66.667 9.78 0.00 0.00 4.18
2332 2367 3.488090 CGGAGCGGCGGAAAACTC 61.488 66.667 9.78 5.94 0.00 3.01
2355 2390 2.280865 GCCAGTATACCGCCCTGC 60.281 66.667 0.00 0.00 0.00 4.85
2356 2391 2.029073 CGCCAGTATACCGCCCTG 59.971 66.667 0.00 0.00 0.00 4.45
2357 2392 3.231736 CCGCCAGTATACCGCCCT 61.232 66.667 0.00 0.00 0.00 5.19
2358 2393 4.309950 CCCGCCAGTATACCGCCC 62.310 72.222 0.00 0.00 0.00 6.13
2359 2394 3.543641 ACCCGCCAGTATACCGCC 61.544 66.667 0.00 0.00 0.00 6.13
2360 2395 2.279918 CACCCGCCAGTATACCGC 60.280 66.667 0.00 0.72 0.00 5.68
2361 2396 1.227147 CACACCCGCCAGTATACCG 60.227 63.158 0.00 0.00 0.00 4.02
2362 2397 1.523032 GCACACCCGCCAGTATACC 60.523 63.158 0.00 0.00 0.00 2.73
2363 2398 1.881252 CGCACACCCGCCAGTATAC 60.881 63.158 0.00 0.00 0.00 1.47
2364 2399 2.497293 CGCACACCCGCCAGTATA 59.503 61.111 0.00 0.00 0.00 1.47
2395 2430 1.008995 CAAAACGCCGAACACCTGG 60.009 57.895 0.00 0.00 0.00 4.45
2396 2431 0.316689 GACAAAACGCCGAACACCTG 60.317 55.000 0.00 0.00 0.00 4.00
2397 2432 0.463116 AGACAAAACGCCGAACACCT 60.463 50.000 0.00 0.00 0.00 4.00
2398 2433 0.316689 CAGACAAAACGCCGAACACC 60.317 55.000 0.00 0.00 0.00 4.16
2399 2434 0.928451 GCAGACAAAACGCCGAACAC 60.928 55.000 0.00 0.00 0.00 3.32
2400 2435 1.092921 AGCAGACAAAACGCCGAACA 61.093 50.000 0.00 0.00 0.00 3.18
2401 2436 0.384353 GAGCAGACAAAACGCCGAAC 60.384 55.000 0.00 0.00 0.00 3.95
2402 2437 1.827315 CGAGCAGACAAAACGCCGAA 61.827 55.000 0.00 0.00 0.00 4.30
2403 2438 2.307309 CGAGCAGACAAAACGCCGA 61.307 57.895 0.00 0.00 0.00 5.54
2404 2439 2.170985 CGAGCAGACAAAACGCCG 59.829 61.111 0.00 0.00 0.00 6.46
2405 2440 2.556287 CCGAGCAGACAAAACGCC 59.444 61.111 0.00 0.00 0.00 5.68
2406 2441 2.127232 GCCGAGCAGACAAAACGC 60.127 61.111 0.00 0.00 0.00 4.84
2407 2442 1.626654 ATCGCCGAGCAGACAAAACG 61.627 55.000 0.00 0.00 0.00 3.60
2408 2443 0.179215 CATCGCCGAGCAGACAAAAC 60.179 55.000 0.00 0.00 0.00 2.43
2409 2444 1.298157 CCATCGCCGAGCAGACAAAA 61.298 55.000 0.00 0.00 0.00 2.44
2410 2445 1.741401 CCATCGCCGAGCAGACAAA 60.741 57.895 0.00 0.00 0.00 2.83
2411 2446 2.125552 CCATCGCCGAGCAGACAA 60.126 61.111 0.00 0.00 0.00 3.18
2412 2447 3.068064 TCCATCGCCGAGCAGACA 61.068 61.111 0.00 0.00 0.00 3.41
2413 2448 2.583593 GTCCATCGCCGAGCAGAC 60.584 66.667 0.00 0.00 0.00 3.51
2414 2449 2.755876 AGTCCATCGCCGAGCAGA 60.756 61.111 0.00 0.00 0.00 4.26
2415 2450 2.279120 GAGTCCATCGCCGAGCAG 60.279 66.667 0.00 0.00 0.00 4.24
2416 2451 4.193334 CGAGTCCATCGCCGAGCA 62.193 66.667 0.00 0.00 45.98 4.26
2431 2466 2.798689 CGCCTTCTCGTCATCCGA 59.201 61.111 0.00 0.00 45.00 4.55
2432 2467 2.956964 GCGCCTTCTCGTCATCCG 60.957 66.667 0.00 0.00 38.13 4.18
2433 2468 1.590259 GAGCGCCTTCTCGTCATCC 60.590 63.158 2.29 0.00 0.00 3.51
2434 2469 4.005032 GAGCGCCTTCTCGTCATC 57.995 61.111 2.29 0.00 0.00 2.92
2449 2484 2.882777 CTACAGCAGCACCGCGAG 60.883 66.667 8.23 0.00 36.85 5.03
2450 2485 4.435436 CCTACAGCAGCACCGCGA 62.435 66.667 8.23 0.00 36.85 5.87
2451 2486 4.435436 TCCTACAGCAGCACCGCG 62.435 66.667 0.00 0.00 36.85 6.46
2452 2487 2.510238 CTCCTACAGCAGCACCGC 60.510 66.667 0.00 0.00 0.00 5.68
2453 2488 1.888436 TTCCTCCTACAGCAGCACCG 61.888 60.000 0.00 0.00 0.00 4.94
2454 2489 0.107945 CTTCCTCCTACAGCAGCACC 60.108 60.000 0.00 0.00 0.00 5.01
2455 2490 0.742635 GCTTCCTCCTACAGCAGCAC 60.743 60.000 0.00 0.00 33.45 4.40
2456 2491 1.599047 GCTTCCTCCTACAGCAGCA 59.401 57.895 0.00 0.00 33.45 4.41
2457 2492 1.153269 GGCTTCCTCCTACAGCAGC 60.153 63.158 0.00 0.00 35.05 5.25
2458 2493 1.142748 CGGCTTCCTCCTACAGCAG 59.857 63.158 0.00 0.00 35.05 4.24
2459 2494 0.687757 ATCGGCTTCCTCCTACAGCA 60.688 55.000 0.00 0.00 35.05 4.41
2460 2495 0.249657 CATCGGCTTCCTCCTACAGC 60.250 60.000 0.00 0.00 0.00 4.40
2461 2496 0.390860 CCATCGGCTTCCTCCTACAG 59.609 60.000 0.00 0.00 0.00 2.74
2462 2497 1.686325 GCCATCGGCTTCCTCCTACA 61.686 60.000 0.00 0.00 46.69 2.74
2463 2498 1.069935 GCCATCGGCTTCCTCCTAC 59.930 63.158 0.00 0.00 46.69 3.18
2464 2499 3.550974 GCCATCGGCTTCCTCCTA 58.449 61.111 0.00 0.00 46.69 2.94
2473 2508 3.554692 CTTGACGTCGCCATCGGC 61.555 66.667 11.62 0.00 46.75 5.54
2474 2509 2.885644 CCTTGACGTCGCCATCGG 60.886 66.667 11.62 0.88 36.13 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.