Multiple sequence alignment - TraesCS7D01G173500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G173500 chr7D 100.000 3078 0 0 1 3078 125907967 125911044 0.000000e+00 5685.0
1 TraesCS7D01G173500 chr7D 94.045 1545 52 19 726 2247 125887491 125889018 0.000000e+00 2307.0
2 TraesCS7D01G173500 chr7D 84.421 674 92 11 2410 3078 270162224 270161559 0.000000e+00 651.0
3 TraesCS7D01G173500 chr7D 100.000 31 0 0 2344 2374 478052387 478052417 1.190000e-04 58.4
4 TraesCS7D01G173500 chr7A 91.855 1596 71 31 824 2375 127370835 127372415 0.000000e+00 2172.0
5 TraesCS7D01G173500 chr7A 88.279 674 71 8 2409 3078 127372867 127373536 0.000000e+00 800.0
6 TraesCS7D01G173500 chr7B 91.288 1607 69 31 751 2318 87125526 87127100 0.000000e+00 2126.0
7 TraesCS7D01G173500 chr7B 84.404 654 84 11 2432 3078 371744202 371743560 7.250000e-176 627.0
8 TraesCS7D01G173500 chr2D 84.467 676 94 10 2409 3078 48208686 48209356 0.000000e+00 656.0
9 TraesCS7D01G173500 chr2D 84.416 77 6 4 1216 1289 88088470 88088543 1.530000e-08 71.3
10 TraesCS7D01G173500 chr5D 84.030 670 96 10 2413 3075 448876483 448875818 4.330000e-178 634.0
11 TraesCS7D01G173500 chr5D 83.735 664 97 9 2409 3065 394531802 394532461 4.360000e-173 617.0
12 TraesCS7D01G173500 chr5D 77.320 291 50 12 1154 1433 355794600 355794885 1.140000e-34 158.0
13 TraesCS7D01G173500 chr1A 83.505 679 99 12 2409 3078 38736406 38737080 3.370000e-174 621.0
14 TraesCS7D01G173500 chr3D 83.333 678 98 14 2409 3078 305883488 305882818 2.030000e-171 612.0
15 TraesCS7D01G173500 chr3D 96.491 57 2 0 537 593 20563060 20563004 9.090000e-16 95.3
16 TraesCS7D01G173500 chr1D 83.161 677 101 12 2409 3078 425542047 425541377 9.440000e-170 606.0
17 TraesCS7D01G173500 chr1D 87.500 64 6 2 2347 2409 449717334 449717396 4.260000e-09 73.1
18 TraesCS7D01G173500 chr5A 78.758 306 55 8 1151 1448 457380435 457380738 2.420000e-46 196.0
19 TraesCS7D01G173500 chr5A 75.835 389 66 21 1062 1433 457516823 457516446 4.080000e-39 172.0
20 TraesCS7D01G173500 chr5A 83.417 199 16 7 2018 2204 564945957 564946150 5.280000e-38 169.0
21 TraesCS7D01G173500 chr5A 78.926 242 46 4 1223 1460 631858979 631858739 3.180000e-35 159.0
22 TraesCS7D01G173500 chr5A 86.726 113 15 0 1890 2002 564945609 564945721 3.220000e-25 126.0
23 TraesCS7D01G173500 chr5B 78.819 288 51 8 1169 1448 419947818 419948103 5.240000e-43 185.0
24 TraesCS7D01G173500 chr5B 77.055 292 49 13 1154 1433 420714331 420714616 5.320000e-33 152.0
25 TraesCS7D01G173500 chr5B 100.000 29 0 0 318 346 653015457 653015485 2.000000e-03 54.7
26 TraesCS7D01G173500 chr2B 100.000 30 0 0 2377 2406 614395172 614395143 4.290000e-04 56.5
27 TraesCS7D01G173500 chr2B 100.000 30 0 0 2377 2406 614500606 614500577 4.290000e-04 56.5
28 TraesCS7D01G173500 chr3A 100.000 28 0 0 321 348 311861646 311861619 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G173500 chr7D 125907967 125911044 3077 False 5685 5685 100.000 1 3078 1 chr7D.!!$F2 3077
1 TraesCS7D01G173500 chr7D 125887491 125889018 1527 False 2307 2307 94.045 726 2247 1 chr7D.!!$F1 1521
2 TraesCS7D01G173500 chr7D 270161559 270162224 665 True 651 651 84.421 2410 3078 1 chr7D.!!$R1 668
3 TraesCS7D01G173500 chr7A 127370835 127373536 2701 False 1486 2172 90.067 824 3078 2 chr7A.!!$F1 2254
4 TraesCS7D01G173500 chr7B 87125526 87127100 1574 False 2126 2126 91.288 751 2318 1 chr7B.!!$F1 1567
5 TraesCS7D01G173500 chr7B 371743560 371744202 642 True 627 627 84.404 2432 3078 1 chr7B.!!$R1 646
6 TraesCS7D01G173500 chr2D 48208686 48209356 670 False 656 656 84.467 2409 3078 1 chr2D.!!$F1 669
7 TraesCS7D01G173500 chr5D 448875818 448876483 665 True 634 634 84.030 2413 3075 1 chr5D.!!$R1 662
8 TraesCS7D01G173500 chr5D 394531802 394532461 659 False 617 617 83.735 2409 3065 1 chr5D.!!$F2 656
9 TraesCS7D01G173500 chr1A 38736406 38737080 674 False 621 621 83.505 2409 3078 1 chr1A.!!$F1 669
10 TraesCS7D01G173500 chr3D 305882818 305883488 670 True 612 612 83.333 2409 3078 1 chr3D.!!$R2 669
11 TraesCS7D01G173500 chr1D 425541377 425542047 670 True 606 606 83.161 2409 3078 1 chr1D.!!$R1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
640 641 0.035056 CGATTTTCACTCTGGGGCCT 60.035 55.0 0.84 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2389 2469 0.442699 GTTGATGACTTTCGCGGTCC 59.557 55.0 6.13 0.0 33.22 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.697756 CCCACGGCGAGGAAAGCA 62.698 66.667 25.15 0.00 36.08 3.91
21 22 3.423154 CCACGGCGAGGAAAGCAC 61.423 66.667 18.99 0.00 36.08 4.40
22 23 3.423154 CACGGCGAGGAAAGCACC 61.423 66.667 16.62 0.00 36.08 5.01
24 25 4.735132 CGGCGAGGAAAGCACCGA 62.735 66.667 0.00 0.00 46.71 4.69
25 26 2.358247 GGCGAGGAAAGCACCGAA 60.358 61.111 0.00 0.00 36.08 4.30
26 27 1.964373 GGCGAGGAAAGCACCGAAA 60.964 57.895 0.00 0.00 36.08 3.46
27 28 1.305930 GGCGAGGAAAGCACCGAAAT 61.306 55.000 0.00 0.00 36.08 2.17
28 29 0.521735 GCGAGGAAAGCACCGAAATT 59.478 50.000 0.00 0.00 34.73 1.82
29 30 1.729149 GCGAGGAAAGCACCGAAATTG 60.729 52.381 0.00 0.00 34.73 2.32
30 31 1.535462 CGAGGAAAGCACCGAAATTGT 59.465 47.619 0.00 0.00 34.73 2.71
31 32 2.739913 CGAGGAAAGCACCGAAATTGTA 59.260 45.455 0.00 0.00 34.73 2.41
32 33 3.181520 CGAGGAAAGCACCGAAATTGTAG 60.182 47.826 0.00 0.00 34.73 2.74
33 34 3.081804 AGGAAAGCACCGAAATTGTAGG 58.918 45.455 0.00 0.00 34.73 3.18
34 35 2.817844 GGAAAGCACCGAAATTGTAGGT 59.182 45.455 0.00 0.00 39.12 3.08
35 36 3.119955 GGAAAGCACCGAAATTGTAGGTC 60.120 47.826 0.00 0.00 35.85 3.85
36 37 1.722011 AGCACCGAAATTGTAGGTCG 58.278 50.000 0.00 0.00 35.85 4.79
42 43 3.449322 CGAAATTGTAGGTCGGTGTTG 57.551 47.619 0.00 0.00 0.00 3.33
43 44 2.158841 CGAAATTGTAGGTCGGTGTTGG 59.841 50.000 0.00 0.00 0.00 3.77
44 45 1.530323 AATTGTAGGTCGGTGTTGGC 58.470 50.000 0.00 0.00 0.00 4.52
45 46 0.672401 ATTGTAGGTCGGTGTTGGCG 60.672 55.000 0.00 0.00 0.00 5.69
46 47 2.030490 TTGTAGGTCGGTGTTGGCGT 62.030 55.000 0.00 0.00 0.00 5.68
47 48 2.025418 GTAGGTCGGTGTTGGCGTG 61.025 63.158 0.00 0.00 0.00 5.34
48 49 2.500714 TAGGTCGGTGTTGGCGTGT 61.501 57.895 0.00 0.00 0.00 4.49
49 50 2.702751 TAGGTCGGTGTTGGCGTGTG 62.703 60.000 0.00 0.00 0.00 3.82
50 51 2.586635 GTCGGTGTTGGCGTGTGA 60.587 61.111 0.00 0.00 0.00 3.58
51 52 2.174969 GTCGGTGTTGGCGTGTGAA 61.175 57.895 0.00 0.00 0.00 3.18
52 53 1.227704 TCGGTGTTGGCGTGTGAAT 60.228 52.632 0.00 0.00 0.00 2.57
53 54 1.206578 CGGTGTTGGCGTGTGAATC 59.793 57.895 0.00 0.00 0.00 2.52
54 55 1.206578 GGTGTTGGCGTGTGAATCG 59.793 57.895 0.00 0.00 0.00 3.34
55 56 1.225376 GGTGTTGGCGTGTGAATCGA 61.225 55.000 0.00 0.00 0.00 3.59
56 57 0.584396 GTGTTGGCGTGTGAATCGAA 59.416 50.000 0.00 0.00 0.00 3.71
57 58 1.196808 GTGTTGGCGTGTGAATCGAAT 59.803 47.619 0.00 0.00 0.00 3.34
58 59 1.463056 TGTTGGCGTGTGAATCGAATC 59.537 47.619 0.00 0.00 0.00 2.52
59 60 0.718904 TTGGCGTGTGAATCGAATCG 59.281 50.000 0.00 0.00 0.00 3.34
60 61 0.109039 TGGCGTGTGAATCGAATCGA 60.109 50.000 8.12 8.12 41.13 3.59
61 62 0.996462 GGCGTGTGAATCGAATCGAA 59.004 50.000 10.12 0.00 39.99 3.71
62 63 1.266891 GGCGTGTGAATCGAATCGAAC 60.267 52.381 10.12 4.07 39.99 3.95
63 64 1.586679 GCGTGTGAATCGAATCGAACG 60.587 52.381 18.63 18.63 39.99 3.95
64 65 1.908889 CGTGTGAATCGAATCGAACGA 59.091 47.619 18.26 17.46 39.99 3.85
70 71 1.772182 ATCGAATCGAACGATGGAGC 58.228 50.000 23.05 1.18 46.35 4.70
71 72 0.454196 TCGAATCGAACGATGGAGCA 59.546 50.000 1.57 0.00 34.70 4.26
72 73 0.848942 CGAATCGAACGATGGAGCAG 59.151 55.000 10.40 0.00 34.70 4.24
73 74 0.579156 GAATCGAACGATGGAGCAGC 59.421 55.000 10.40 0.00 34.70 5.25
92 93 2.975799 GAGGCGTCGGCAACCAAA 60.976 61.111 21.79 0.00 42.47 3.28
93 94 2.966309 GAGGCGTCGGCAACCAAAG 61.966 63.158 21.79 0.00 42.47 2.77
94 95 4.700365 GGCGTCGGCAACCAAAGC 62.700 66.667 14.73 0.00 42.47 3.51
95 96 3.959975 GCGTCGGCAACCAAAGCA 61.960 61.111 0.00 0.00 39.62 3.91
96 97 2.953821 CGTCGGCAACCAAAGCAT 59.046 55.556 0.00 0.00 0.00 3.79
97 98 1.154225 CGTCGGCAACCAAAGCATC 60.154 57.895 0.00 0.00 0.00 3.91
98 99 1.851021 CGTCGGCAACCAAAGCATCA 61.851 55.000 0.00 0.00 0.00 3.07
99 100 0.387239 GTCGGCAACCAAAGCATCAC 60.387 55.000 0.00 0.00 0.00 3.06
100 101 1.080569 CGGCAACCAAAGCATCACC 60.081 57.895 0.00 0.00 0.00 4.02
101 102 1.080569 GGCAACCAAAGCATCACCG 60.081 57.895 0.00 0.00 0.00 4.94
102 103 1.080569 GCAACCAAAGCATCACCGG 60.081 57.895 0.00 0.00 0.00 5.28
103 104 1.586028 CAACCAAAGCATCACCGGG 59.414 57.895 6.32 0.00 0.00 5.73
104 105 0.893270 CAACCAAAGCATCACCGGGA 60.893 55.000 6.32 0.00 0.00 5.14
105 106 0.893727 AACCAAAGCATCACCGGGAC 60.894 55.000 6.32 0.00 0.00 4.46
106 107 1.002134 CCAAAGCATCACCGGGACT 60.002 57.895 6.32 0.00 0.00 3.85
107 108 1.308069 CCAAAGCATCACCGGGACTG 61.308 60.000 6.32 0.00 0.00 3.51
108 109 1.002134 AAAGCATCACCGGGACTGG 60.002 57.895 6.32 0.00 0.00 4.00
109 110 2.484287 AAAGCATCACCGGGACTGGG 62.484 60.000 6.32 0.00 0.00 4.45
110 111 4.489771 GCATCACCGGGACTGGGG 62.490 72.222 6.32 0.00 0.00 4.96
112 113 2.124085 ATCACCGGGACTGGGGAA 59.876 61.111 6.32 0.00 46.61 3.97
113 114 1.995626 ATCACCGGGACTGGGGAAG 60.996 63.158 6.32 0.00 46.61 3.46
114 115 2.471084 ATCACCGGGACTGGGGAAGA 62.471 60.000 6.32 0.00 46.61 2.87
115 116 2.206036 ACCGGGACTGGGGAAGAA 59.794 61.111 6.32 0.00 0.00 2.52
116 117 1.918800 ACCGGGACTGGGGAAGAAG 60.919 63.158 6.32 0.00 0.00 2.85
117 118 2.670148 CCGGGACTGGGGAAGAAGG 61.670 68.421 0.00 0.00 0.00 3.46
118 119 2.677848 GGGACTGGGGAAGAAGGC 59.322 66.667 0.00 0.00 0.00 4.35
119 120 1.925972 GGGACTGGGGAAGAAGGCT 60.926 63.158 0.00 0.00 0.00 4.58
120 121 1.604915 GGACTGGGGAAGAAGGCTC 59.395 63.158 0.00 0.00 0.00 4.70
121 122 1.604915 GACTGGGGAAGAAGGCTCC 59.395 63.158 0.00 0.00 0.00 4.70
122 123 1.916206 GACTGGGGAAGAAGGCTCCC 61.916 65.000 0.90 0.90 42.84 4.30
125 126 3.325806 GGGAAGAAGGCTCCCCTC 58.674 66.667 0.00 0.00 41.90 4.30
126 127 2.379459 GGGAAGAAGGCTCCCCTCC 61.379 68.421 0.00 0.00 41.90 4.30
127 128 2.736826 GGAAGAAGGCTCCCCTCCG 61.737 68.421 0.00 0.00 41.90 4.63
128 129 2.689034 AAGAAGGCTCCCCTCCGG 60.689 66.667 0.00 0.00 41.90 5.14
129 130 3.564347 AAGAAGGCTCCCCTCCGGT 62.564 63.158 0.00 0.00 41.90 5.28
130 131 3.471806 GAAGGCTCCCCTCCGGTC 61.472 72.222 0.00 0.00 41.90 4.79
142 143 4.096003 CCGGTCCGGTGGATTGCT 62.096 66.667 23.02 0.00 42.73 3.91
143 144 2.046314 CGGTCCGGTGGATTGCTT 60.046 61.111 2.34 0.00 32.73 3.91
144 145 1.674322 CGGTCCGGTGGATTGCTTT 60.674 57.895 2.34 0.00 32.73 3.51
145 146 1.883021 GGTCCGGTGGATTGCTTTG 59.117 57.895 0.00 0.00 32.73 2.77
146 147 1.595093 GGTCCGGTGGATTGCTTTGG 61.595 60.000 0.00 0.00 32.73 3.28
147 148 0.608035 GTCCGGTGGATTGCTTTGGA 60.608 55.000 0.00 0.00 32.73 3.53
148 149 0.322456 TCCGGTGGATTGCTTTGGAG 60.322 55.000 0.00 0.00 0.00 3.86
149 150 1.315257 CCGGTGGATTGCTTTGGAGG 61.315 60.000 0.00 0.00 0.00 4.30
150 151 1.893062 GGTGGATTGCTTTGGAGGC 59.107 57.895 0.00 0.00 0.00 4.70
151 152 1.508088 GTGGATTGCTTTGGAGGCG 59.492 57.895 0.00 0.00 0.00 5.52
152 153 1.074775 TGGATTGCTTTGGAGGCGT 59.925 52.632 0.00 0.00 0.00 5.68
153 154 0.960364 TGGATTGCTTTGGAGGCGTC 60.960 55.000 0.00 0.00 0.00 5.19
154 155 0.678048 GGATTGCTTTGGAGGCGTCT 60.678 55.000 6.34 0.00 0.00 4.18
155 156 1.406887 GGATTGCTTTGGAGGCGTCTA 60.407 52.381 6.34 0.00 0.00 2.59
156 157 1.666189 GATTGCTTTGGAGGCGTCTAC 59.334 52.381 6.34 0.00 0.00 2.59
157 158 0.394938 TTGCTTTGGAGGCGTCTACA 59.605 50.000 0.00 0.00 30.51 2.74
158 159 0.394938 TGCTTTGGAGGCGTCTACAA 59.605 50.000 11.54 11.54 41.79 2.41
162 163 2.178912 TTGGAGGCGTCTACAAAAGG 57.821 50.000 13.48 0.00 40.65 3.11
163 164 1.053424 TGGAGGCGTCTACAAAAGGT 58.947 50.000 0.00 0.00 29.18 3.50
164 165 2.250031 TGGAGGCGTCTACAAAAGGTA 58.750 47.619 0.00 0.00 29.18 3.08
165 166 2.028748 TGGAGGCGTCTACAAAAGGTAC 60.029 50.000 0.00 0.00 29.18 3.34
166 167 2.257034 GAGGCGTCTACAAAAGGTACG 58.743 52.381 0.00 0.00 0.00 3.67
167 168 1.888512 AGGCGTCTACAAAAGGTACGA 59.111 47.619 0.00 0.00 0.00 3.43
168 169 2.494870 AGGCGTCTACAAAAGGTACGAT 59.505 45.455 0.00 0.00 0.00 3.73
169 170 3.056322 AGGCGTCTACAAAAGGTACGATT 60.056 43.478 0.00 0.00 0.00 3.34
170 171 3.681417 GGCGTCTACAAAAGGTACGATTT 59.319 43.478 0.00 0.00 0.00 2.17
171 172 4.152938 GGCGTCTACAAAAGGTACGATTTT 59.847 41.667 0.00 2.51 0.00 1.82
172 173 5.334337 GGCGTCTACAAAAGGTACGATTTTT 60.334 40.000 5.05 1.40 0.00 1.94
199 200 9.703892 TCTTCTTTTCTTCTTGTGAGAATAGAG 57.296 33.333 6.96 3.93 40.93 2.43
200 201 9.487790 CTTCTTTTCTTCTTGTGAGAATAGAGT 57.512 33.333 6.96 0.00 40.93 3.24
222 223 9.651913 AGAGTAGAATTGAATTGAAGAAGAGTC 57.348 33.333 0.00 0.00 0.00 3.36
223 224 8.472683 AGTAGAATTGAATTGAAGAAGAGTCG 57.527 34.615 0.00 0.00 0.00 4.18
224 225 6.175712 AGAATTGAATTGAAGAAGAGTCGC 57.824 37.500 0.00 0.00 0.00 5.19
225 226 4.590400 ATTGAATTGAAGAAGAGTCGCG 57.410 40.909 0.00 0.00 0.00 5.87
226 227 3.297830 TGAATTGAAGAAGAGTCGCGA 57.702 42.857 3.71 3.71 0.00 5.87
227 228 3.849911 TGAATTGAAGAAGAGTCGCGAT 58.150 40.909 14.06 0.47 0.00 4.58
228 229 4.245660 TGAATTGAAGAAGAGTCGCGATT 58.754 39.130 14.06 8.44 0.00 3.34
229 230 4.091945 TGAATTGAAGAAGAGTCGCGATTG 59.908 41.667 14.06 0.00 0.00 2.67
230 231 3.297830 TTGAAGAAGAGTCGCGATTGA 57.702 42.857 14.06 0.00 0.00 2.57
231 232 2.868662 TGAAGAAGAGTCGCGATTGAG 58.131 47.619 14.06 0.00 0.00 3.02
232 233 2.229062 TGAAGAAGAGTCGCGATTGAGT 59.771 45.455 14.06 0.00 0.00 3.41
233 234 2.553079 AGAAGAGTCGCGATTGAGTC 57.447 50.000 14.06 6.87 38.38 3.36
241 242 2.813474 CGATTGAGTCGCCGGCAA 60.813 61.111 28.98 13.47 44.33 4.52
242 243 2.785258 GATTGAGTCGCCGGCAAC 59.215 61.111 28.98 20.49 0.00 4.17
243 244 2.746277 ATTGAGTCGCCGGCAACC 60.746 61.111 28.98 13.14 0.00 3.77
244 245 3.254024 ATTGAGTCGCCGGCAACCT 62.254 57.895 28.98 18.33 0.00 3.50
245 246 4.680237 TGAGTCGCCGGCAACCTG 62.680 66.667 28.98 9.94 0.00 4.00
255 256 3.583383 GCAACCTGCAGTAGCCAG 58.417 61.111 13.81 0.00 44.26 4.85
256 257 2.042831 GCAACCTGCAGTAGCCAGG 61.043 63.158 13.81 5.92 44.26 4.45
257 258 1.679311 CAACCTGCAGTAGCCAGGA 59.321 57.895 13.81 0.00 39.75 3.86
258 259 0.254178 CAACCTGCAGTAGCCAGGAT 59.746 55.000 13.81 0.00 39.75 3.24
259 260 0.543749 AACCTGCAGTAGCCAGGATC 59.456 55.000 13.81 0.00 39.75 3.36
260 261 1.341156 ACCTGCAGTAGCCAGGATCC 61.341 60.000 13.81 2.48 39.75 3.36
261 262 1.068753 CTGCAGTAGCCAGGATCCG 59.931 63.158 5.25 1.07 41.13 4.18
262 263 2.280457 GCAGTAGCCAGGATCCGC 60.280 66.667 5.98 4.64 33.58 5.54
263 264 2.028190 CAGTAGCCAGGATCCGCG 59.972 66.667 5.98 0.00 0.00 6.46
264 265 3.227276 AGTAGCCAGGATCCGCGG 61.227 66.667 22.12 22.12 0.00 6.46
265 266 3.224324 GTAGCCAGGATCCGCGGA 61.224 66.667 33.12 33.12 0.00 5.54
266 267 2.912542 TAGCCAGGATCCGCGGAG 60.913 66.667 33.87 20.16 0.00 4.63
267 268 3.430907 TAGCCAGGATCCGCGGAGA 62.431 63.158 33.87 12.25 0.00 3.71
268 269 2.715181 TAGCCAGGATCCGCGGAGAT 62.715 60.000 33.87 20.16 0.00 2.75
269 270 2.341543 CCAGGATCCGCGGAGATG 59.658 66.667 33.87 27.61 0.00 2.90
270 271 2.341543 CAGGATCCGCGGAGATGG 59.658 66.667 33.87 18.66 0.00 3.51
271 272 2.198703 AGGATCCGCGGAGATGGA 59.801 61.111 33.87 9.58 37.95 3.41
272 273 1.905843 AGGATCCGCGGAGATGGAG 60.906 63.158 33.87 0.34 37.04 3.86
273 274 2.048690 GATCCGCGGAGATGGAGC 60.049 66.667 33.87 8.04 37.04 4.70
274 275 2.522923 ATCCGCGGAGATGGAGCT 60.523 61.111 33.87 11.30 37.04 4.09
275 276 2.762006 GATCCGCGGAGATGGAGCTG 62.762 65.000 33.87 0.00 37.10 4.24
276 277 4.598894 CCGCGGAGATGGAGCTGG 62.599 72.222 24.07 0.00 0.00 4.85
299 300 3.391382 GACGTGGGACCCTGGGAG 61.391 72.222 22.23 5.70 0.00 4.30
309 310 2.041405 CCTGGGAGGGAGGGTCTC 60.041 72.222 0.00 0.00 0.00 3.36
310 311 2.443016 CTGGGAGGGAGGGTCTCG 60.443 72.222 0.00 0.00 32.34 4.04
311 312 4.779733 TGGGAGGGAGGGTCTCGC 62.780 72.222 4.14 4.14 42.60 5.03
316 317 2.043852 GGGAGGGTCTCGCTGAGA 60.044 66.667 4.47 4.47 39.79 3.27
328 329 3.942130 TCGCTGAGAGAGATGAAACAA 57.058 42.857 0.00 0.00 0.00 2.83
329 330 4.257267 TCGCTGAGAGAGATGAAACAAA 57.743 40.909 0.00 0.00 0.00 2.83
330 331 4.240888 TCGCTGAGAGAGATGAAACAAAG 58.759 43.478 0.00 0.00 0.00 2.77
331 332 4.021981 TCGCTGAGAGAGATGAAACAAAGA 60.022 41.667 0.00 0.00 0.00 2.52
332 333 4.687948 CGCTGAGAGAGATGAAACAAAGAA 59.312 41.667 0.00 0.00 0.00 2.52
333 334 5.178252 CGCTGAGAGAGATGAAACAAAGAAA 59.822 40.000 0.00 0.00 0.00 2.52
334 335 6.601264 GCTGAGAGAGATGAAACAAAGAAAG 58.399 40.000 0.00 0.00 0.00 2.62
335 336 6.426328 GCTGAGAGAGATGAAACAAAGAAAGA 59.574 38.462 0.00 0.00 0.00 2.52
336 337 7.041508 GCTGAGAGAGATGAAACAAAGAAAGAA 60.042 37.037 0.00 0.00 0.00 2.52
337 338 8.737168 TGAGAGAGATGAAACAAAGAAAGAAA 57.263 30.769 0.00 0.00 0.00 2.52
338 339 8.834465 TGAGAGAGATGAAACAAAGAAAGAAAG 58.166 33.333 0.00 0.00 0.00 2.62
339 340 8.970859 AGAGAGATGAAACAAAGAAAGAAAGA 57.029 30.769 0.00 0.00 0.00 2.52
340 341 9.401058 AGAGAGATGAAACAAAGAAAGAAAGAA 57.599 29.630 0.00 0.00 0.00 2.52
351 352 9.166173 ACAAAGAAAGAAAGAAAGAAAATTGGG 57.834 29.630 0.00 0.00 0.00 4.12
352 353 9.166173 CAAAGAAAGAAAGAAAGAAAATTGGGT 57.834 29.630 0.00 0.00 0.00 4.51
353 354 8.722480 AAGAAAGAAAGAAAGAAAATTGGGTG 57.278 30.769 0.00 0.00 0.00 4.61
354 355 7.275183 AGAAAGAAAGAAAGAAAATTGGGTGG 58.725 34.615 0.00 0.00 0.00 4.61
355 356 5.551305 AGAAAGAAAGAAAATTGGGTGGG 57.449 39.130 0.00 0.00 0.00 4.61
356 357 4.968719 AGAAAGAAAGAAAATTGGGTGGGT 59.031 37.500 0.00 0.00 0.00 4.51
357 358 4.955811 AAGAAAGAAAATTGGGTGGGTC 57.044 40.909 0.00 0.00 0.00 4.46
358 359 2.890945 AGAAAGAAAATTGGGTGGGTCG 59.109 45.455 0.00 0.00 0.00 4.79
359 360 1.627864 AAGAAAATTGGGTGGGTCGG 58.372 50.000 0.00 0.00 0.00 4.79
360 361 0.251608 AGAAAATTGGGTGGGTCGGG 60.252 55.000 0.00 0.00 0.00 5.14
361 362 0.541063 GAAAATTGGGTGGGTCGGGT 60.541 55.000 0.00 0.00 0.00 5.28
362 363 0.541063 AAAATTGGGTGGGTCGGGTC 60.541 55.000 0.00 0.00 0.00 4.46
363 364 2.435120 AAATTGGGTGGGTCGGGTCC 62.435 60.000 0.00 0.00 0.00 4.46
380 381 4.003788 CCACCGGTCGCTCCAGTT 62.004 66.667 2.59 0.00 35.57 3.16
381 382 2.030562 CACCGGTCGCTCCAGTTT 59.969 61.111 2.59 0.00 35.57 2.66
382 383 2.030562 ACCGGTCGCTCCAGTTTG 59.969 61.111 0.00 0.00 35.57 2.93
383 384 2.030562 CCGGTCGCTCCAGTTTGT 59.969 61.111 0.00 0.00 35.57 2.83
384 385 1.597027 CCGGTCGCTCCAGTTTGTT 60.597 57.895 0.00 0.00 35.57 2.83
385 386 1.164041 CCGGTCGCTCCAGTTTGTTT 61.164 55.000 0.00 0.00 35.57 2.83
386 387 0.234884 CGGTCGCTCCAGTTTGTTTC 59.765 55.000 0.00 0.00 35.57 2.78
387 388 0.234884 GGTCGCTCCAGTTTGTTTCG 59.765 55.000 0.00 0.00 35.97 3.46
388 389 0.935196 GTCGCTCCAGTTTGTTTCGT 59.065 50.000 0.00 0.00 0.00 3.85
389 390 1.329599 GTCGCTCCAGTTTGTTTCGTT 59.670 47.619 0.00 0.00 0.00 3.85
390 391 1.329292 TCGCTCCAGTTTGTTTCGTTG 59.671 47.619 0.00 0.00 0.00 4.10
391 392 1.596954 CGCTCCAGTTTGTTTCGTTGG 60.597 52.381 0.00 0.00 0.00 3.77
392 393 1.673920 GCTCCAGTTTGTTTCGTTGGA 59.326 47.619 0.00 0.00 36.55 3.53
393 394 2.293399 GCTCCAGTTTGTTTCGTTGGAT 59.707 45.455 0.00 0.00 37.32 3.41
394 395 3.609409 GCTCCAGTTTGTTTCGTTGGATC 60.609 47.826 0.00 0.00 37.32 3.36
395 396 2.546368 TCCAGTTTGTTTCGTTGGATCG 59.454 45.455 0.00 0.00 33.21 3.69
396 397 2.546368 CCAGTTTGTTTCGTTGGATCGA 59.454 45.455 0.00 0.00 38.08 3.59
397 398 3.002862 CCAGTTTGTTTCGTTGGATCGAA 59.997 43.478 0.00 0.00 45.87 3.71
398 399 4.320202 CCAGTTTGTTTCGTTGGATCGAAT 60.320 41.667 2.57 0.00 46.55 3.34
399 400 4.846137 CAGTTTGTTTCGTTGGATCGAATC 59.154 41.667 2.57 3.30 46.55 2.52
400 401 3.715618 TTGTTTCGTTGGATCGAATCG 57.284 42.857 0.00 0.00 46.55 3.34
401 402 1.996898 TGTTTCGTTGGATCGAATCGG 59.003 47.619 1.76 0.00 46.55 4.18
402 403 2.264813 GTTTCGTTGGATCGAATCGGA 58.735 47.619 1.76 2.41 46.55 4.55
403 404 2.203800 TTCGTTGGATCGAATCGGAG 57.796 50.000 1.76 0.00 43.36 4.63
404 405 1.100510 TCGTTGGATCGAATCGGAGT 58.899 50.000 1.76 0.00 36.89 3.85
405 406 2.291365 TCGTTGGATCGAATCGGAGTA 58.709 47.619 1.76 0.00 36.89 2.59
406 407 2.684374 TCGTTGGATCGAATCGGAGTAA 59.316 45.455 1.76 0.00 36.89 2.24
407 408 3.129113 TCGTTGGATCGAATCGGAGTAAA 59.871 43.478 1.76 0.00 36.89 2.01
408 409 3.861113 CGTTGGATCGAATCGGAGTAAAA 59.139 43.478 1.76 0.00 0.00 1.52
409 410 4.327898 CGTTGGATCGAATCGGAGTAAAAA 59.672 41.667 1.76 0.00 0.00 1.94
430 431 4.561735 AAAATGGAAAACGACGACATGT 57.438 36.364 0.00 0.00 0.00 3.21
431 432 3.536158 AATGGAAAACGACGACATGTG 57.464 42.857 1.15 0.00 0.00 3.21
432 433 0.584396 TGGAAAACGACGACATGTGC 59.416 50.000 1.15 0.00 0.00 4.57
433 434 0.865769 GGAAAACGACGACATGTGCT 59.134 50.000 1.15 0.00 0.00 4.40
434 435 1.398451 GGAAAACGACGACATGTGCTG 60.398 52.381 1.15 0.00 0.00 4.41
435 436 0.041312 AAAACGACGACATGTGCTGC 60.041 50.000 1.15 0.00 0.00 5.25
436 437 2.158058 AAACGACGACATGTGCTGCG 62.158 55.000 1.15 2.53 0.00 5.18
437 438 3.842126 CGACGACATGTGCTGCGG 61.842 66.667 1.15 0.00 0.00 5.69
438 439 2.432456 GACGACATGTGCTGCGGA 60.432 61.111 1.15 0.00 0.00 5.54
439 440 2.433145 ACGACATGTGCTGCGGAG 60.433 61.111 1.15 0.00 0.00 4.63
452 453 3.490759 CGGAGCGCGCACTTCAAT 61.491 61.111 35.10 10.81 0.00 2.57
453 454 2.401195 GGAGCGCGCACTTCAATC 59.599 61.111 35.10 19.63 0.00 2.67
454 455 2.390599 GGAGCGCGCACTTCAATCA 61.391 57.895 35.10 0.00 0.00 2.57
455 456 1.225854 GAGCGCGCACTTCAATCAC 60.226 57.895 35.10 6.95 0.00 3.06
456 457 2.571611 GCGCGCACTTCAATCACG 60.572 61.111 29.10 0.00 0.00 4.35
457 458 2.853210 CGCGCACTTCAATCACGT 59.147 55.556 8.75 0.00 0.00 4.49
458 459 1.507713 CGCGCACTTCAATCACGTG 60.508 57.895 9.94 9.94 0.00 4.49
463 464 1.609932 CACTTCAATCACGTGCATGC 58.390 50.000 11.82 11.82 0.00 4.06
464 465 1.198408 CACTTCAATCACGTGCATGCT 59.802 47.619 20.33 0.00 0.00 3.79
465 466 1.198408 ACTTCAATCACGTGCATGCTG 59.802 47.619 20.33 13.87 0.00 4.41
466 467 1.465777 CTTCAATCACGTGCATGCTGA 59.534 47.619 20.33 14.80 0.00 4.26
467 468 1.081094 TCAATCACGTGCATGCTGAG 58.919 50.000 20.33 12.27 0.00 3.35
468 469 1.081094 CAATCACGTGCATGCTGAGA 58.919 50.000 20.33 15.14 0.00 3.27
469 470 1.062148 CAATCACGTGCATGCTGAGAG 59.938 52.381 20.33 8.76 0.00 3.20
470 471 1.088340 ATCACGTGCATGCTGAGAGC 61.088 55.000 20.33 1.45 42.82 4.09
471 472 2.435586 ACGTGCATGCTGAGAGCC 60.436 61.111 20.33 0.00 41.51 4.70
472 473 2.125229 CGTGCATGCTGAGAGCCT 60.125 61.111 20.33 0.00 41.51 4.58
473 474 2.172372 CGTGCATGCTGAGAGCCTC 61.172 63.158 20.33 0.00 41.51 4.70
474 475 1.818785 GTGCATGCTGAGAGCCTCC 60.819 63.158 20.33 0.00 41.51 4.30
475 476 1.993948 TGCATGCTGAGAGCCTCCT 60.994 57.895 20.33 0.00 41.51 3.69
476 477 1.227615 GCATGCTGAGAGCCTCCTC 60.228 63.158 11.37 0.00 41.51 3.71
486 487 3.222287 AGCCTCCTCTAGCTCCAAG 57.778 57.895 0.00 0.00 32.71 3.61
487 488 0.338120 AGCCTCCTCTAGCTCCAAGT 59.662 55.000 0.00 0.00 32.71 3.16
488 489 1.571457 AGCCTCCTCTAGCTCCAAGTA 59.429 52.381 0.00 0.00 32.71 2.24
489 490 1.960689 GCCTCCTCTAGCTCCAAGTAG 59.039 57.143 0.00 0.00 0.00 2.57
490 491 2.688515 GCCTCCTCTAGCTCCAAGTAGT 60.689 54.545 0.00 0.00 0.00 2.73
491 492 3.435313 GCCTCCTCTAGCTCCAAGTAGTA 60.435 52.174 0.00 0.00 0.00 1.82
492 493 4.139038 CCTCCTCTAGCTCCAAGTAGTAC 58.861 52.174 0.00 0.00 0.00 2.73
493 494 4.141344 CCTCCTCTAGCTCCAAGTAGTACT 60.141 50.000 0.00 0.00 0.00 2.73
494 495 5.038651 TCCTCTAGCTCCAAGTAGTACTC 57.961 47.826 2.58 0.00 0.00 2.59
495 496 4.722781 TCCTCTAGCTCCAAGTAGTACTCT 59.277 45.833 2.58 0.00 0.00 3.24
496 497 5.904169 TCCTCTAGCTCCAAGTAGTACTCTA 59.096 44.000 2.58 0.00 0.00 2.43
497 498 5.993441 CCTCTAGCTCCAAGTAGTACTCTAC 59.007 48.000 2.58 0.00 44.79 2.59
507 508 4.873768 GTAGTACTCTACTCCGTTGGTC 57.126 50.000 0.00 0.00 42.15 4.02
508 509 3.717452 AGTACTCTACTCCGTTGGTCT 57.283 47.619 0.00 0.00 32.47 3.85
509 510 3.608796 AGTACTCTACTCCGTTGGTCTC 58.391 50.000 0.00 0.00 32.47 3.36
510 511 1.451067 ACTCTACTCCGTTGGTCTCG 58.549 55.000 0.00 0.00 0.00 4.04
512 513 0.679002 TCTACTCCGTTGGTCTCGGG 60.679 60.000 4.58 0.00 46.82 5.14
514 515 4.452733 CTCCGTTGGTCTCGGGGC 62.453 72.222 4.58 0.00 46.82 5.80
517 518 4.760047 CGTTGGTCTCGGGGCCAG 62.760 72.222 9.50 0.00 36.00 4.85
518 519 4.410400 GTTGGTCTCGGGGCCAGG 62.410 72.222 9.50 0.00 36.00 4.45
519 520 4.649705 TTGGTCTCGGGGCCAGGA 62.650 66.667 9.50 0.00 36.00 3.86
522 523 4.779733 GTCTCGGGGCCAGGAGGA 62.780 72.222 19.82 7.25 36.89 3.71
523 524 4.465446 TCTCGGGGCCAGGAGGAG 62.465 72.222 19.82 10.81 36.89 3.69
526 527 4.860881 CGGGGCCAGGAGGAGCTA 62.861 72.222 4.39 0.00 36.89 3.32
527 528 3.164977 GGGGCCAGGAGGAGCTAC 61.165 72.222 4.39 0.00 36.89 3.58
528 529 3.541713 GGGCCAGGAGGAGCTACG 61.542 72.222 4.39 0.00 36.89 3.51
529 530 4.228567 GGCCAGGAGGAGCTACGC 62.229 72.222 0.00 0.00 36.89 4.42
530 531 3.151022 GCCAGGAGGAGCTACGCT 61.151 66.667 0.00 0.00 43.88 5.07
531 532 2.811101 CCAGGAGGAGCTACGCTG 59.189 66.667 0.00 0.00 39.88 5.18
532 533 1.754621 CCAGGAGGAGCTACGCTGA 60.755 63.158 0.00 0.00 39.88 4.26
533 534 1.323271 CCAGGAGGAGCTACGCTGAA 61.323 60.000 0.00 0.00 39.88 3.02
534 535 0.532573 CAGGAGGAGCTACGCTGAAA 59.467 55.000 0.00 0.00 39.88 2.69
535 536 1.066858 CAGGAGGAGCTACGCTGAAAA 60.067 52.381 0.00 0.00 39.88 2.29
536 537 1.623811 AGGAGGAGCTACGCTGAAAAA 59.376 47.619 0.00 0.00 39.88 1.94
537 538 2.003301 GGAGGAGCTACGCTGAAAAAG 58.997 52.381 0.00 0.00 39.88 2.27
538 539 2.003301 GAGGAGCTACGCTGAAAAAGG 58.997 52.381 0.00 0.00 39.88 3.11
539 540 1.087501 GGAGCTACGCTGAAAAAGGG 58.912 55.000 0.00 0.00 39.88 3.95
540 541 1.338769 GGAGCTACGCTGAAAAAGGGA 60.339 52.381 0.00 0.00 39.88 4.20
541 542 2.633488 GAGCTACGCTGAAAAAGGGAT 58.367 47.619 0.00 0.00 39.88 3.85
542 543 3.431766 GGAGCTACGCTGAAAAAGGGATA 60.432 47.826 0.00 0.00 39.88 2.59
543 544 4.189231 GAGCTACGCTGAAAAAGGGATAA 58.811 43.478 0.00 0.00 39.88 1.75
544 545 4.781934 AGCTACGCTGAAAAAGGGATAAT 58.218 39.130 0.00 0.00 41.34 1.28
545 546 5.925509 AGCTACGCTGAAAAAGGGATAATA 58.074 37.500 0.00 0.00 41.34 0.98
546 547 5.758784 AGCTACGCTGAAAAAGGGATAATAC 59.241 40.000 0.00 0.00 41.34 1.89
547 548 5.758784 GCTACGCTGAAAAAGGGATAATACT 59.241 40.000 0.00 0.00 41.34 2.12
548 549 6.927381 GCTACGCTGAAAAAGGGATAATACTA 59.073 38.462 0.00 0.00 41.34 1.82
549 550 7.116519 GCTACGCTGAAAAAGGGATAATACTAG 59.883 40.741 0.00 0.00 41.34 2.57
550 551 7.120923 ACGCTGAAAAAGGGATAATACTAGA 57.879 36.000 0.00 0.00 41.34 2.43
551 552 6.985059 ACGCTGAAAAAGGGATAATACTAGAC 59.015 38.462 0.00 0.00 41.34 2.59
552 553 7.147707 ACGCTGAAAAAGGGATAATACTAGACT 60.148 37.037 0.00 0.00 41.34 3.24
553 554 7.382759 CGCTGAAAAAGGGATAATACTAGACTC 59.617 40.741 0.00 0.00 41.34 3.36
554 555 8.204836 GCTGAAAAAGGGATAATACTAGACTCA 58.795 37.037 0.00 0.00 0.00 3.41
555 556 9.535878 CTGAAAAAGGGATAATACTAGACTCAC 57.464 37.037 0.00 0.00 0.00 3.51
556 557 8.195436 TGAAAAAGGGATAATACTAGACTCACG 58.805 37.037 0.00 0.00 0.00 4.35
557 558 6.651975 AAAGGGATAATACTAGACTCACGG 57.348 41.667 0.00 0.00 0.00 4.94
558 559 4.664392 AGGGATAATACTAGACTCACGGG 58.336 47.826 0.00 0.00 0.00 5.28
559 560 3.193056 GGGATAATACTAGACTCACGGGC 59.807 52.174 0.00 0.00 0.00 6.13
560 561 4.080687 GGATAATACTAGACTCACGGGCT 58.919 47.826 0.00 0.00 37.00 5.19
561 562 4.156373 GGATAATACTAGACTCACGGGCTC 59.844 50.000 0.00 0.00 33.70 4.70
562 563 1.984066 ATACTAGACTCACGGGCTCC 58.016 55.000 0.00 0.00 33.70 4.70
563 564 0.917533 TACTAGACTCACGGGCTCCT 59.082 55.000 0.00 0.00 33.70 3.69
564 565 0.039911 ACTAGACTCACGGGCTCCTT 59.960 55.000 0.00 0.00 33.70 3.36
565 566 0.741915 CTAGACTCACGGGCTCCTTC 59.258 60.000 0.00 0.00 33.70 3.46
566 567 0.039180 TAGACTCACGGGCTCCTTCA 59.961 55.000 0.00 0.00 33.70 3.02
567 568 0.832135 AGACTCACGGGCTCCTTCAA 60.832 55.000 0.00 0.00 0.00 2.69
568 569 0.670854 GACTCACGGGCTCCTTCAAC 60.671 60.000 0.00 0.00 0.00 3.18
569 570 1.738099 CTCACGGGCTCCTTCAACG 60.738 63.158 0.00 0.00 0.00 4.10
570 571 2.742372 CACGGGCTCCTTCAACGG 60.742 66.667 0.00 0.00 0.00 4.44
571 572 2.920912 ACGGGCTCCTTCAACGGA 60.921 61.111 0.00 0.00 0.00 4.69
572 573 2.434359 CGGGCTCCTTCAACGGAC 60.434 66.667 0.00 0.00 0.00 4.79
573 574 2.046217 GGGCTCCTTCAACGGACC 60.046 66.667 0.00 0.00 0.00 4.46
574 575 2.593956 GGGCTCCTTCAACGGACCT 61.594 63.158 0.00 0.00 0.00 3.85
575 576 1.375326 GGCTCCTTCAACGGACCTT 59.625 57.895 0.00 0.00 0.00 3.50
576 577 0.250770 GGCTCCTTCAACGGACCTTT 60.251 55.000 0.00 0.00 0.00 3.11
577 578 1.002773 GGCTCCTTCAACGGACCTTTA 59.997 52.381 0.00 0.00 0.00 1.85
578 579 2.074576 GCTCCTTCAACGGACCTTTAC 58.925 52.381 0.00 0.00 0.00 2.01
579 580 2.334838 CTCCTTCAACGGACCTTTACG 58.665 52.381 0.00 0.00 0.00 3.18
580 581 1.001181 TCCTTCAACGGACCTTTACGG 59.999 52.381 0.00 0.00 39.35 4.02
581 582 1.001181 CCTTCAACGGACCTTTACGGA 59.999 52.381 0.00 0.00 36.31 4.69
582 583 2.334838 CTTCAACGGACCTTTACGGAG 58.665 52.381 0.00 0.00 36.31 4.63
584 585 1.000060 TCAACGGACCTTTACGGAGTG 60.000 52.381 0.00 0.00 45.73 3.51
585 586 0.319405 AACGGACCTTTACGGAGTGG 59.681 55.000 0.00 0.00 45.73 4.00
586 587 1.447314 CGGACCTTTACGGAGTGGC 60.447 63.158 0.00 0.00 45.73 5.01
587 588 1.078637 GGACCTTTACGGAGTGGCC 60.079 63.158 0.00 0.00 45.73 5.36
588 589 1.551019 GGACCTTTACGGAGTGGCCT 61.551 60.000 3.32 0.00 45.73 5.19
589 590 1.188863 GACCTTTACGGAGTGGCCTA 58.811 55.000 3.32 0.00 45.73 3.93
590 591 0.900421 ACCTTTACGGAGTGGCCTAC 59.100 55.000 3.32 0.00 45.73 3.18
595 596 4.230603 CGGAGTGGCCTACGTCTA 57.769 61.111 3.32 0.00 40.32 2.59
596 597 1.726265 CGGAGTGGCCTACGTCTAC 59.274 63.158 3.32 0.00 40.32 2.59
597 598 1.726265 GGAGTGGCCTACGTCTACG 59.274 63.158 3.32 0.04 46.33 3.51
607 608 4.711980 CGTCTACGTGCCATCTCC 57.288 61.111 0.00 0.00 34.11 3.71
608 609 2.107705 CGTCTACGTGCCATCTCCT 58.892 57.895 0.00 0.00 34.11 3.69
609 610 1.306148 CGTCTACGTGCCATCTCCTA 58.694 55.000 0.00 0.00 34.11 2.94
610 611 1.674441 CGTCTACGTGCCATCTCCTAA 59.326 52.381 0.00 0.00 34.11 2.69
611 612 2.293677 CGTCTACGTGCCATCTCCTAAT 59.706 50.000 0.00 0.00 34.11 1.73
612 613 3.243434 CGTCTACGTGCCATCTCCTAATT 60.243 47.826 0.00 0.00 34.11 1.40
613 614 4.694339 GTCTACGTGCCATCTCCTAATTT 58.306 43.478 0.00 0.00 0.00 1.82
614 615 4.508124 GTCTACGTGCCATCTCCTAATTTG 59.492 45.833 0.00 0.00 0.00 2.32
615 616 2.017049 ACGTGCCATCTCCTAATTTGC 58.983 47.619 0.00 0.00 0.00 3.68
616 617 1.334869 CGTGCCATCTCCTAATTTGCC 59.665 52.381 0.00 0.00 0.00 4.52
617 618 1.683385 GTGCCATCTCCTAATTTGCCC 59.317 52.381 0.00 0.00 0.00 5.36
618 619 1.332195 GCCATCTCCTAATTTGCCCC 58.668 55.000 0.00 0.00 0.00 5.80
619 620 2.001076 CCATCTCCTAATTTGCCCCC 57.999 55.000 0.00 0.00 0.00 5.40
635 636 3.175133 CCCCCGATTTTCACTCTGG 57.825 57.895 0.00 0.00 0.00 3.86
636 637 0.394352 CCCCCGATTTTCACTCTGGG 60.394 60.000 0.00 0.00 37.02 4.45
637 638 3.175133 CCCGATTTTCACTCTGGGG 57.825 57.895 0.00 0.00 32.85 4.96
638 639 1.032114 CCCGATTTTCACTCTGGGGC 61.032 60.000 0.00 0.00 32.85 5.80
639 640 1.032114 CCGATTTTCACTCTGGGGCC 61.032 60.000 0.00 0.00 0.00 5.80
640 641 0.035056 CGATTTTCACTCTGGGGCCT 60.035 55.000 0.84 0.00 0.00 5.19
641 642 1.467920 GATTTTCACTCTGGGGCCTG 58.532 55.000 0.84 0.00 0.00 4.85
642 643 0.613012 ATTTTCACTCTGGGGCCTGC 60.613 55.000 0.84 0.00 0.00 4.85
643 644 3.551496 TTTCACTCTGGGGCCTGCG 62.551 63.158 0.84 0.00 0.00 5.18
645 646 4.020617 CACTCTGGGGCCTGCGAA 62.021 66.667 0.84 0.00 0.00 4.70
646 647 4.021925 ACTCTGGGGCCTGCGAAC 62.022 66.667 0.84 0.00 0.00 3.95
647 648 4.785453 CTCTGGGGCCTGCGAACC 62.785 72.222 0.84 0.00 0.00 3.62
649 650 4.351054 CTGGGGCCTGCGAACCTT 62.351 66.667 0.84 0.00 0.00 3.50
650 651 2.931105 TGGGGCCTGCGAACCTTA 60.931 61.111 0.84 0.00 0.00 2.69
651 652 2.353573 GGGGCCTGCGAACCTTAA 59.646 61.111 0.84 0.00 0.00 1.85
652 653 1.076995 GGGGCCTGCGAACCTTAAT 60.077 57.895 0.84 0.00 0.00 1.40
653 654 0.683179 GGGGCCTGCGAACCTTAATT 60.683 55.000 0.84 0.00 0.00 1.40
654 655 1.409101 GGGGCCTGCGAACCTTAATTA 60.409 52.381 0.84 0.00 0.00 1.40
655 656 2.371306 GGGCCTGCGAACCTTAATTAA 58.629 47.619 0.84 0.00 0.00 1.40
656 657 2.756207 GGGCCTGCGAACCTTAATTAAA 59.244 45.455 0.84 0.00 0.00 1.52
657 658 3.383505 GGGCCTGCGAACCTTAATTAAAT 59.616 43.478 0.84 0.00 0.00 1.40
658 659 4.499188 GGGCCTGCGAACCTTAATTAAATC 60.499 45.833 0.84 0.00 0.00 2.17
659 660 4.499188 GGCCTGCGAACCTTAATTAAATCC 60.499 45.833 0.00 0.00 0.00 3.01
660 661 4.338400 GCCTGCGAACCTTAATTAAATCCT 59.662 41.667 0.00 0.00 0.00 3.24
661 662 5.733373 GCCTGCGAACCTTAATTAAATCCTG 60.733 44.000 0.00 0.00 0.00 3.86
662 663 5.221048 CCTGCGAACCTTAATTAAATCCTGG 60.221 44.000 0.00 0.00 0.00 4.45
663 664 4.097286 TGCGAACCTTAATTAAATCCTGGC 59.903 41.667 0.00 0.62 0.00 4.85
664 665 4.097286 GCGAACCTTAATTAAATCCTGGCA 59.903 41.667 0.00 0.00 0.00 4.92
665 666 5.393678 GCGAACCTTAATTAAATCCTGGCAA 60.394 40.000 0.00 0.00 0.00 4.52
666 667 6.033966 CGAACCTTAATTAAATCCTGGCAAC 58.966 40.000 0.00 0.00 0.00 4.17
667 668 6.127730 CGAACCTTAATTAAATCCTGGCAACT 60.128 38.462 0.00 0.00 37.61 3.16
668 669 7.066525 CGAACCTTAATTAAATCCTGGCAACTA 59.933 37.037 0.00 0.00 37.61 2.24
669 670 8.658840 AACCTTAATTAAATCCTGGCAACTAA 57.341 30.769 0.00 0.00 37.61 2.24
670 671 8.838649 ACCTTAATTAAATCCTGGCAACTAAT 57.161 30.769 0.00 0.00 37.61 1.73
671 672 9.930158 ACCTTAATTAAATCCTGGCAACTAATA 57.070 29.630 0.00 0.00 37.61 0.98
680 681 9.474313 AAATCCTGGCAACTAATACTTAATCAA 57.526 29.630 0.00 0.00 37.61 2.57
681 682 7.859325 TCCTGGCAACTAATACTTAATCAAC 57.141 36.000 0.00 0.00 37.61 3.18
682 683 6.826741 TCCTGGCAACTAATACTTAATCAACC 59.173 38.462 0.00 0.00 37.61 3.77
683 684 6.039382 CCTGGCAACTAATACTTAATCAACCC 59.961 42.308 0.00 0.00 37.61 4.11
684 685 5.587043 TGGCAACTAATACTTAATCAACCCG 59.413 40.000 0.00 0.00 37.61 5.28
685 686 5.008316 GGCAACTAATACTTAATCAACCCGG 59.992 44.000 0.00 0.00 0.00 5.73
686 687 5.587443 GCAACTAATACTTAATCAACCCGGT 59.413 40.000 0.00 0.00 0.00 5.28
687 688 6.762661 GCAACTAATACTTAATCAACCCGGTA 59.237 38.462 0.00 0.00 0.00 4.02
688 689 7.280652 GCAACTAATACTTAATCAACCCGGTAA 59.719 37.037 0.00 0.00 0.00 2.85
689 690 9.165035 CAACTAATACTTAATCAACCCGGTAAA 57.835 33.333 0.00 0.00 0.00 2.01
690 691 8.722480 ACTAATACTTAATCAACCCGGTAAAC 57.278 34.615 0.00 0.00 0.00 2.01
691 692 8.542926 ACTAATACTTAATCAACCCGGTAAACT 58.457 33.333 0.00 0.00 0.00 2.66
692 693 7.854557 AATACTTAATCAACCCGGTAAACTC 57.145 36.000 0.00 0.00 0.00 3.01
693 694 4.582869 ACTTAATCAACCCGGTAAACTCC 58.417 43.478 0.00 0.00 0.00 3.85
694 695 2.502142 AATCAACCCGGTAAACTCCC 57.498 50.000 0.00 0.00 0.00 4.30
695 696 0.622136 ATCAACCCGGTAAACTCCCC 59.378 55.000 0.00 0.00 0.00 4.81
696 697 1.376295 CAACCCGGTAAACTCCCCG 60.376 63.158 0.00 0.00 43.82 5.73
697 698 1.842920 AACCCGGTAAACTCCCCGT 60.843 57.895 0.00 0.00 42.67 5.28
698 699 2.115734 AACCCGGTAAACTCCCCGTG 62.116 60.000 0.00 0.00 42.67 4.94
699 700 2.266689 CCGGTAAACTCCCCGTGG 59.733 66.667 0.00 0.00 42.67 4.94
700 701 2.285024 CCGGTAAACTCCCCGTGGA 61.285 63.158 0.00 0.00 42.67 4.02
701 702 1.079612 CGGTAAACTCCCCGTGGAC 60.080 63.158 0.00 0.00 39.38 4.02
702 703 1.297689 GGTAAACTCCCCGTGGACC 59.702 63.158 0.00 0.00 35.03 4.46
703 704 1.297689 GTAAACTCCCCGTGGACCC 59.702 63.158 0.00 0.00 35.03 4.46
704 705 1.919816 TAAACTCCCCGTGGACCCC 60.920 63.158 0.00 0.00 35.03 4.95
719 720 3.309582 CCCCCGTGAGTGTAGCAT 58.690 61.111 0.00 0.00 0.00 3.79
720 721 1.602237 CCCCCGTGAGTGTAGCATT 59.398 57.895 0.00 0.00 0.00 3.56
721 722 0.744414 CCCCCGTGAGTGTAGCATTG 60.744 60.000 0.00 0.00 0.00 2.82
722 723 1.369091 CCCCGTGAGTGTAGCATTGC 61.369 60.000 0.00 0.00 0.00 3.56
723 724 1.369091 CCCGTGAGTGTAGCATTGCC 61.369 60.000 4.70 0.00 0.00 4.52
724 725 1.369091 CCGTGAGTGTAGCATTGCCC 61.369 60.000 4.70 0.00 0.00 5.36
735 736 1.620323 AGCATTGCCCCTGAAAAAGAC 59.380 47.619 4.70 0.00 0.00 3.01
808 809 1.445095 GCATCTCCACTCTCGCCAT 59.555 57.895 0.00 0.00 0.00 4.40
809 810 0.179062 GCATCTCCACTCTCGCCATT 60.179 55.000 0.00 0.00 0.00 3.16
810 811 1.863267 CATCTCCACTCTCGCCATTC 58.137 55.000 0.00 0.00 0.00 2.67
811 812 0.387202 ATCTCCACTCTCGCCATTCG 59.613 55.000 0.00 0.00 40.15 3.34
812 813 1.880340 CTCCACTCTCGCCATTCGC 60.880 63.158 0.00 0.00 38.27 4.70
813 814 2.892425 CCACTCTCGCCATTCGCC 60.892 66.667 0.00 0.00 38.27 5.54
814 815 2.125552 CACTCTCGCCATTCGCCA 60.126 61.111 0.00 0.00 38.27 5.69
855 856 2.539274 CGCACCAAACCATCAAAAAGTG 59.461 45.455 0.00 0.00 0.00 3.16
884 894 0.467384 CCATTTTTGCCACCACACCA 59.533 50.000 0.00 0.00 0.00 4.17
893 903 2.203098 ACCACACCAACCGTTCGG 60.203 61.111 9.81 9.81 0.00 4.30
908 918 2.418197 CGTTCGGTCCACCAATATCTGT 60.418 50.000 0.00 0.00 35.14 3.41
950 971 4.315122 CCGGCGATCGAGACTCGG 62.315 72.222 23.92 17.69 40.88 4.63
955 976 2.180862 CGATCGAGACTCGGGAGCA 61.181 63.158 23.92 5.33 40.88 4.26
1027 1048 2.202676 CGCGACCAGAAGAGCTCC 60.203 66.667 10.93 0.00 0.00 4.70
1618 1657 4.506255 GGGTCGGCATCAAGGGGG 62.506 72.222 0.00 0.00 0.00 5.40
1874 1913 1.089920 GGCGTCTGGTACTACGAGAA 58.910 55.000 16.40 0.00 39.92 2.87
1961 2000 4.170062 CTGCATGAAGCCGCGGTG 62.170 66.667 28.70 17.83 44.83 4.94
2039 2096 3.361977 GCTCGCCGGCAAAGGAAA 61.362 61.111 28.98 0.81 0.00 3.13
2042 2099 3.747976 CGCCGGCAAAGGAAAGGG 61.748 66.667 28.98 0.98 0.00 3.95
2044 2101 1.906333 GCCGGCAAAGGAAAGGGAA 60.906 57.895 24.80 0.00 0.00 3.97
2100 2161 3.668447 TGATGTTCCTCTGTTTGAGCTC 58.332 45.455 6.82 6.82 41.35 4.09
2128 2191 7.826744 AGAGATCTCTCCCTTTAATTTGTTGTC 59.173 37.037 19.92 0.00 43.88 3.18
2130 2193 5.001232 TCTCTCCCTTTAATTTGTTGTCCG 58.999 41.667 0.00 0.00 0.00 4.79
2206 2274 4.545208 AAGAGAGCTAGTGGGTTTCTTC 57.455 45.455 5.76 0.00 41.09 2.87
2215 2283 4.058721 AGTGGGTTTCTTCACAATTTGC 57.941 40.909 0.00 0.00 36.43 3.68
2259 2328 1.640917 TTCCTGTAGAGGCCGAAAGT 58.359 50.000 0.00 0.00 39.57 2.66
2274 2343 5.163683 GGCCGAAAGTAATAAAGGTCTTTCC 60.164 44.000 0.00 0.00 41.18 3.13
2330 2410 5.261216 TGGATATGTTTTGAGGAGAAACCC 58.739 41.667 0.00 0.00 40.05 4.11
2331 2411 4.645136 GGATATGTTTTGAGGAGAAACCCC 59.355 45.833 0.00 0.00 40.05 4.95
2336 2416 5.711698 TGTTTTGAGGAGAAACCCCTATTT 58.288 37.500 0.00 0.00 40.05 1.40
2338 2418 3.366052 TGAGGAGAAACCCCTATTTGC 57.634 47.619 0.00 0.00 40.05 3.68
2339 2419 2.647299 TGAGGAGAAACCCCTATTTGCA 59.353 45.455 0.00 0.00 40.05 4.08
2354 2434 4.660789 ATTTGCATTGTAAGGGCATCTC 57.339 40.909 0.00 0.00 37.39 2.75
2359 2439 2.107950 TTGTAAGGGCATCTCCAACG 57.892 50.000 0.00 0.00 36.21 4.10
2367 2447 2.610859 ATCTCCAACGCCCACCCT 60.611 61.111 0.00 0.00 0.00 4.34
2368 2448 2.670148 ATCTCCAACGCCCACCCTC 61.670 63.158 0.00 0.00 0.00 4.30
2371 2451 2.203422 CCAACGCCCACCCTCAAA 60.203 61.111 0.00 0.00 0.00 2.69
2373 2453 2.203437 AACGCCCACCCTCAAACC 60.203 61.111 0.00 0.00 0.00 3.27
2374 2454 4.636435 ACGCCCACCCTCAAACCG 62.636 66.667 0.00 0.00 0.00 4.44
2384 2464 2.437002 TCAAACCGCCCCGCATAC 60.437 61.111 0.00 0.00 0.00 2.39
2397 2477 3.879682 CATACGTCCGGACCGCGA 61.880 66.667 28.52 14.78 0.00 5.87
2401 2481 4.712425 CGTCCGGACCGCGAAAGT 62.712 66.667 28.52 0.00 0.00 2.66
2406 2486 1.445410 CGGACCGCGAAAGTCATCA 60.445 57.895 8.23 0.00 35.89 3.07
2408 2488 0.442699 GGACCGCGAAAGTCATCAAC 59.557 55.000 8.23 0.00 35.89 3.18
2409 2489 1.429463 GACCGCGAAAGTCATCAACT 58.571 50.000 8.23 0.00 41.10 3.16
2421 2920 6.882768 AAGTCATCAACTTCTCTCCCTTAT 57.117 37.500 0.00 0.00 45.28 1.73
2425 2924 8.826765 AGTCATCAACTTCTCTCCCTTATTTTA 58.173 33.333 0.00 0.00 33.03 1.52
2441 2940 6.127083 CCTTATTTTACATTTGCACCCTCCAT 60.127 38.462 0.00 0.00 0.00 3.41
2451 2951 2.042762 CCCTCCATCTCCCCACCA 59.957 66.667 0.00 0.00 0.00 4.17
2481 2981 4.753662 TCCGCCCGCTACAGAGGT 62.754 66.667 0.00 0.00 32.75 3.85
2534 3035 1.518572 CGCTCGCCTTTACGATGGT 60.519 57.895 0.00 0.00 42.02 3.55
2535 3036 1.082117 CGCTCGCCTTTACGATGGTT 61.082 55.000 0.00 0.00 42.02 3.67
2538 3039 2.480759 GCTCGCCTTTACGATGGTTCTA 60.481 50.000 0.00 0.00 42.02 2.10
2576 3078 3.782443 CCCAGGTACACTCCGCCC 61.782 72.222 0.00 0.00 0.00 6.13
2663 3167 7.519002 AGCTTATTTTCAAACACTATGTCGTC 58.481 34.615 0.00 0.00 0.00 4.20
2853 3362 3.556365 TGTACGTCATTCAAGAACGCAAA 59.444 39.130 0.00 0.00 0.00 3.68
2957 3466 1.449423 TGGCTATTGCACGCGACAT 60.449 52.632 15.93 0.78 41.91 3.06
3003 3515 8.419076 TTCCTTTTGCTCAACTTGTTTAAATC 57.581 30.769 0.00 0.00 0.00 2.17
3013 3525 9.232082 CTCAACTTGTTTAAATCATTCGTTCAA 57.768 29.630 0.00 0.00 0.00 2.69
3016 3528 8.434870 ACTTGTTTAAATCATTCGTTCAATCG 57.565 30.769 0.00 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.423154 GTGCTTTCCTCGCCGTGG 61.423 66.667 0.00 0.00 0.00 4.94
5 6 3.423154 GGTGCTTTCCTCGCCGTG 61.423 66.667 0.00 0.00 0.00 4.94
8 9 1.305930 ATTTCGGTGCTTTCCTCGCC 61.306 55.000 0.00 0.00 0.00 5.54
9 10 0.521735 AATTTCGGTGCTTTCCTCGC 59.478 50.000 0.00 0.00 0.00 5.03
10 11 1.535462 ACAATTTCGGTGCTTTCCTCG 59.465 47.619 0.00 0.00 0.00 4.63
11 12 3.127030 CCTACAATTTCGGTGCTTTCCTC 59.873 47.826 0.00 0.00 0.00 3.71
12 13 3.081804 CCTACAATTTCGGTGCTTTCCT 58.918 45.455 0.00 0.00 0.00 3.36
13 14 2.817844 ACCTACAATTTCGGTGCTTTCC 59.182 45.455 0.00 0.00 0.00 3.13
14 15 3.424433 CGACCTACAATTTCGGTGCTTTC 60.424 47.826 0.00 0.00 0.00 2.62
15 16 2.482721 CGACCTACAATTTCGGTGCTTT 59.517 45.455 0.00 0.00 0.00 3.51
16 17 2.073816 CGACCTACAATTTCGGTGCTT 58.926 47.619 0.00 0.00 0.00 3.91
17 18 1.674817 CCGACCTACAATTTCGGTGCT 60.675 52.381 7.25 0.00 45.95 4.40
18 19 0.725117 CCGACCTACAATTTCGGTGC 59.275 55.000 7.25 0.00 45.95 5.01
22 23 2.158841 CCAACACCGACCTACAATTTCG 59.841 50.000 0.00 0.00 0.00 3.46
23 24 2.095415 GCCAACACCGACCTACAATTTC 60.095 50.000 0.00 0.00 0.00 2.17
24 25 1.883926 GCCAACACCGACCTACAATTT 59.116 47.619 0.00 0.00 0.00 1.82
25 26 1.530323 GCCAACACCGACCTACAATT 58.470 50.000 0.00 0.00 0.00 2.32
26 27 0.672401 CGCCAACACCGACCTACAAT 60.672 55.000 0.00 0.00 0.00 2.71
27 28 1.301087 CGCCAACACCGACCTACAA 60.301 57.895 0.00 0.00 0.00 2.41
28 29 2.340809 CGCCAACACCGACCTACA 59.659 61.111 0.00 0.00 0.00 2.74
29 30 2.025418 CACGCCAACACCGACCTAC 61.025 63.158 0.00 0.00 0.00 3.18
30 31 2.340809 CACGCCAACACCGACCTA 59.659 61.111 0.00 0.00 0.00 3.08
31 32 3.857038 ACACGCCAACACCGACCT 61.857 61.111 0.00 0.00 0.00 3.85
32 33 3.645975 CACACGCCAACACCGACC 61.646 66.667 0.00 0.00 0.00 4.79
33 34 1.503818 ATTCACACGCCAACACCGAC 61.504 55.000 0.00 0.00 0.00 4.79
34 35 1.225376 GATTCACACGCCAACACCGA 61.225 55.000 0.00 0.00 0.00 4.69
35 36 1.206578 GATTCACACGCCAACACCG 59.793 57.895 0.00 0.00 0.00 4.94
36 37 1.206578 CGATTCACACGCCAACACC 59.793 57.895 0.00 0.00 0.00 4.16
37 38 0.584396 TTCGATTCACACGCCAACAC 59.416 50.000 0.00 0.00 0.00 3.32
38 39 1.463056 GATTCGATTCACACGCCAACA 59.537 47.619 2.48 0.00 0.00 3.33
39 40 1.526986 CGATTCGATTCACACGCCAAC 60.527 52.381 0.00 0.00 0.00 3.77
40 41 0.718904 CGATTCGATTCACACGCCAA 59.281 50.000 0.00 0.00 0.00 4.52
41 42 0.109039 TCGATTCGATTCACACGCCA 60.109 50.000 4.29 0.00 0.00 5.69
42 43 0.996462 TTCGATTCGATTCACACGCC 59.004 50.000 9.96 0.00 35.23 5.68
43 44 1.586679 CGTTCGATTCGATTCACACGC 60.587 52.381 14.79 0.00 35.23 5.34
44 45 1.908889 TCGTTCGATTCGATTCACACG 59.091 47.619 18.98 18.98 36.75 4.49
45 46 3.301835 CCATCGTTCGATTCGATTCACAC 60.302 47.826 18.65 3.77 43.98 3.82
46 47 2.857748 CCATCGTTCGATTCGATTCACA 59.142 45.455 18.65 0.00 43.98 3.58
47 48 3.113322 TCCATCGTTCGATTCGATTCAC 58.887 45.455 18.65 4.51 43.98 3.18
48 49 3.372060 CTCCATCGTTCGATTCGATTCA 58.628 45.455 18.65 10.30 43.98 2.57
49 50 2.154007 GCTCCATCGTTCGATTCGATTC 59.846 50.000 18.65 5.74 43.98 2.52
50 51 2.128035 GCTCCATCGTTCGATTCGATT 58.872 47.619 18.65 6.51 43.98 3.34
51 52 1.067060 TGCTCCATCGTTCGATTCGAT 59.933 47.619 9.96 16.49 46.70 3.59
52 53 0.454196 TGCTCCATCGTTCGATTCGA 59.546 50.000 4.29 4.29 41.45 3.71
53 54 0.848942 CTGCTCCATCGTTCGATTCG 59.151 55.000 4.92 0.00 0.00 3.34
54 55 0.579156 GCTGCTCCATCGTTCGATTC 59.421 55.000 4.92 0.00 0.00 2.52
55 56 1.148157 CGCTGCTCCATCGTTCGATT 61.148 55.000 4.92 0.00 0.00 3.34
56 57 1.589993 CGCTGCTCCATCGTTCGAT 60.590 57.895 1.68 1.68 0.00 3.59
57 58 2.202610 CGCTGCTCCATCGTTCGA 60.203 61.111 0.00 0.00 0.00 3.71
58 59 3.257561 CCGCTGCTCCATCGTTCG 61.258 66.667 0.00 0.00 0.00 3.95
59 60 1.880340 CTCCGCTGCTCCATCGTTC 60.880 63.158 0.00 0.00 0.00 3.95
60 61 2.185350 CTCCGCTGCTCCATCGTT 59.815 61.111 0.00 0.00 0.00 3.85
61 62 3.842923 CCTCCGCTGCTCCATCGT 61.843 66.667 0.00 0.00 0.00 3.73
75 76 2.966309 CTTTGGTTGCCGACGCCTC 61.966 63.158 0.00 0.00 0.00 4.70
76 77 2.978010 CTTTGGTTGCCGACGCCT 60.978 61.111 0.00 0.00 0.00 5.52
77 78 4.700365 GCTTTGGTTGCCGACGCC 62.700 66.667 0.00 0.00 0.00 5.68
78 79 3.267597 ATGCTTTGGTTGCCGACGC 62.268 57.895 0.00 0.00 33.39 5.19
79 80 1.154225 GATGCTTTGGTTGCCGACG 60.154 57.895 0.00 0.00 0.00 5.12
80 81 0.387239 GTGATGCTTTGGTTGCCGAC 60.387 55.000 0.00 0.00 0.00 4.79
81 82 1.523154 GGTGATGCTTTGGTTGCCGA 61.523 55.000 0.00 0.00 0.00 5.54
82 83 1.080569 GGTGATGCTTTGGTTGCCG 60.081 57.895 0.00 0.00 0.00 5.69
83 84 1.080569 CGGTGATGCTTTGGTTGCC 60.081 57.895 0.00 0.00 0.00 4.52
84 85 1.080569 CCGGTGATGCTTTGGTTGC 60.081 57.895 0.00 0.00 0.00 4.17
85 86 0.893270 TCCCGGTGATGCTTTGGTTG 60.893 55.000 0.00 0.00 0.00 3.77
86 87 0.893727 GTCCCGGTGATGCTTTGGTT 60.894 55.000 0.00 0.00 0.00 3.67
87 88 1.303317 GTCCCGGTGATGCTTTGGT 60.303 57.895 0.00 0.00 0.00 3.67
88 89 1.002134 AGTCCCGGTGATGCTTTGG 60.002 57.895 0.00 0.00 0.00 3.28
89 90 1.308069 CCAGTCCCGGTGATGCTTTG 61.308 60.000 0.00 0.00 0.00 2.77
90 91 1.002134 CCAGTCCCGGTGATGCTTT 60.002 57.895 0.00 0.00 0.00 3.51
91 92 2.671070 CCAGTCCCGGTGATGCTT 59.329 61.111 0.00 0.00 0.00 3.91
92 93 3.402681 CCCAGTCCCGGTGATGCT 61.403 66.667 0.00 0.00 0.00 3.79
93 94 4.489771 CCCCAGTCCCGGTGATGC 62.490 72.222 0.00 0.00 0.00 3.91
94 95 2.257409 CTTCCCCAGTCCCGGTGATG 62.257 65.000 0.00 0.00 0.00 3.07
95 96 1.995626 CTTCCCCAGTCCCGGTGAT 60.996 63.158 0.00 0.00 0.00 3.06
96 97 2.606519 CTTCCCCAGTCCCGGTGA 60.607 66.667 0.00 0.00 0.00 4.02
97 98 2.185310 CTTCTTCCCCAGTCCCGGTG 62.185 65.000 0.00 0.00 0.00 4.94
98 99 1.918800 CTTCTTCCCCAGTCCCGGT 60.919 63.158 0.00 0.00 0.00 5.28
99 100 2.670148 CCTTCTTCCCCAGTCCCGG 61.670 68.421 0.00 0.00 0.00 5.73
100 101 2.990479 CCTTCTTCCCCAGTCCCG 59.010 66.667 0.00 0.00 0.00 5.14
101 102 1.916206 GAGCCTTCTTCCCCAGTCCC 61.916 65.000 0.00 0.00 0.00 4.46
102 103 1.604915 GAGCCTTCTTCCCCAGTCC 59.395 63.158 0.00 0.00 0.00 3.85
103 104 1.604915 GGAGCCTTCTTCCCCAGTC 59.395 63.158 0.00 0.00 0.00 3.51
104 105 1.925972 GGGAGCCTTCTTCCCCAGT 60.926 63.158 0.00 0.00 38.69 4.00
105 106 3.002371 GGGAGCCTTCTTCCCCAG 58.998 66.667 0.00 0.00 38.69 4.45
109 110 2.736826 CGGAGGGGAGCCTTCTTCC 61.737 68.421 0.00 0.00 37.24 3.46
110 111 2.904131 CGGAGGGGAGCCTTCTTC 59.096 66.667 0.00 0.00 29.89 2.87
126 127 1.674322 AAAGCAATCCACCGGACCG 60.674 57.895 9.46 6.99 32.98 4.79
127 128 1.595093 CCAAAGCAATCCACCGGACC 61.595 60.000 9.46 0.00 32.98 4.46
128 129 0.608035 TCCAAAGCAATCCACCGGAC 60.608 55.000 9.46 0.00 32.98 4.79
129 130 0.322456 CTCCAAAGCAATCCACCGGA 60.322 55.000 9.46 0.00 35.55 5.14
130 131 1.315257 CCTCCAAAGCAATCCACCGG 61.315 60.000 0.00 0.00 0.00 5.28
131 132 1.937546 GCCTCCAAAGCAATCCACCG 61.938 60.000 0.00 0.00 0.00 4.94
132 133 1.893062 GCCTCCAAAGCAATCCACC 59.107 57.895 0.00 0.00 0.00 4.61
133 134 1.244019 ACGCCTCCAAAGCAATCCAC 61.244 55.000 0.00 0.00 0.00 4.02
134 135 0.960364 GACGCCTCCAAAGCAATCCA 60.960 55.000 0.00 0.00 0.00 3.41
135 136 0.678048 AGACGCCTCCAAAGCAATCC 60.678 55.000 0.00 0.00 0.00 3.01
136 137 1.666189 GTAGACGCCTCCAAAGCAATC 59.334 52.381 0.00 0.00 0.00 2.67
137 138 1.003118 TGTAGACGCCTCCAAAGCAAT 59.997 47.619 0.00 0.00 0.00 3.56
138 139 0.394938 TGTAGACGCCTCCAAAGCAA 59.605 50.000 0.00 0.00 0.00 3.91
139 140 0.394938 TTGTAGACGCCTCCAAAGCA 59.605 50.000 0.00 0.00 0.00 3.91
140 141 1.519408 TTTGTAGACGCCTCCAAAGC 58.481 50.000 0.00 0.00 0.00 3.51
141 142 2.484264 CCTTTTGTAGACGCCTCCAAAG 59.516 50.000 0.00 0.00 31.34 2.77
142 143 2.158726 ACCTTTTGTAGACGCCTCCAAA 60.159 45.455 0.00 0.00 0.00 3.28
143 144 1.418637 ACCTTTTGTAGACGCCTCCAA 59.581 47.619 0.00 0.00 0.00 3.53
144 145 1.053424 ACCTTTTGTAGACGCCTCCA 58.947 50.000 0.00 0.00 0.00 3.86
145 146 2.614779 GTACCTTTTGTAGACGCCTCC 58.385 52.381 0.00 0.00 0.00 4.30
146 147 2.095059 TCGTACCTTTTGTAGACGCCTC 60.095 50.000 0.00 0.00 0.00 4.70
147 148 1.888512 TCGTACCTTTTGTAGACGCCT 59.111 47.619 0.00 0.00 0.00 5.52
148 149 2.352503 TCGTACCTTTTGTAGACGCC 57.647 50.000 0.00 0.00 0.00 5.68
149 150 4.916099 AAATCGTACCTTTTGTAGACGC 57.084 40.909 0.00 0.00 0.00 5.19
173 174 9.703892 CTCTATTCTCACAAGAAGAAAAGAAGA 57.296 33.333 0.00 0.00 44.53 2.87
174 175 9.487790 ACTCTATTCTCACAAGAAGAAAAGAAG 57.512 33.333 0.00 0.00 44.53 2.85
196 197 9.651913 GACTCTTCTTCAATTCAATTCTACTCT 57.348 33.333 0.00 0.00 0.00 3.24
197 198 8.591312 CGACTCTTCTTCAATTCAATTCTACTC 58.409 37.037 0.00 0.00 0.00 2.59
198 199 7.064016 GCGACTCTTCTTCAATTCAATTCTACT 59.936 37.037 0.00 0.00 0.00 2.57
199 200 7.176741 GCGACTCTTCTTCAATTCAATTCTAC 58.823 38.462 0.00 0.00 0.00 2.59
200 201 6.035005 CGCGACTCTTCTTCAATTCAATTCTA 59.965 38.462 0.00 0.00 0.00 2.10
201 202 5.163913 CGCGACTCTTCTTCAATTCAATTCT 60.164 40.000 0.00 0.00 0.00 2.40
202 203 5.018240 CGCGACTCTTCTTCAATTCAATTC 58.982 41.667 0.00 0.00 0.00 2.17
203 204 4.690748 TCGCGACTCTTCTTCAATTCAATT 59.309 37.500 3.71 0.00 0.00 2.32
204 205 4.245660 TCGCGACTCTTCTTCAATTCAAT 58.754 39.130 3.71 0.00 0.00 2.57
205 206 3.649073 TCGCGACTCTTCTTCAATTCAA 58.351 40.909 3.71 0.00 0.00 2.69
206 207 3.297830 TCGCGACTCTTCTTCAATTCA 57.702 42.857 3.71 0.00 0.00 2.57
207 208 4.327357 TCAATCGCGACTCTTCTTCAATTC 59.673 41.667 12.93 0.00 0.00 2.17
208 209 4.245660 TCAATCGCGACTCTTCTTCAATT 58.754 39.130 12.93 0.00 0.00 2.32
209 210 3.849911 TCAATCGCGACTCTTCTTCAAT 58.150 40.909 12.93 0.00 0.00 2.57
210 211 3.245797 CTCAATCGCGACTCTTCTTCAA 58.754 45.455 12.93 0.00 0.00 2.69
211 212 2.229062 ACTCAATCGCGACTCTTCTTCA 59.771 45.455 12.93 0.00 0.00 3.02
212 213 2.849473 GACTCAATCGCGACTCTTCTTC 59.151 50.000 12.93 0.00 0.00 2.87
213 214 2.729467 CGACTCAATCGCGACTCTTCTT 60.729 50.000 12.93 0.00 45.52 2.52
214 215 1.202087 CGACTCAATCGCGACTCTTCT 60.202 52.381 12.93 0.00 45.52 2.85
215 216 1.184349 CGACTCAATCGCGACTCTTC 58.816 55.000 12.93 3.56 45.52 2.87
216 217 3.314339 CGACTCAATCGCGACTCTT 57.686 52.632 12.93 0.00 45.52 2.85
225 226 2.750888 GGTTGCCGGCGACTCAATC 61.751 63.158 38.83 22.57 0.00 2.67
226 227 2.746277 GGTTGCCGGCGACTCAAT 60.746 61.111 38.83 0.00 0.00 2.57
227 228 3.936203 AGGTTGCCGGCGACTCAA 61.936 61.111 38.83 18.79 0.00 3.02
228 229 4.680237 CAGGTTGCCGGCGACTCA 62.680 66.667 38.83 13.35 0.00 3.41
234 235 3.127533 CTACTGCAGGTTGCCGGC 61.128 66.667 22.73 22.73 44.23 6.13
235 236 3.127533 GCTACTGCAGGTTGCCGG 61.128 66.667 19.93 0.00 44.23 6.13
238 239 2.042831 CCTGGCTACTGCAGGTTGC 61.043 63.158 19.93 17.67 45.29 4.17
239 240 0.254178 ATCCTGGCTACTGCAGGTTG 59.746 55.000 19.93 8.54 41.91 3.77
240 241 0.543749 GATCCTGGCTACTGCAGGTT 59.456 55.000 19.93 0.00 41.91 3.50
241 242 1.341156 GGATCCTGGCTACTGCAGGT 61.341 60.000 19.93 6.35 41.91 4.00
242 243 1.449353 GGATCCTGGCTACTGCAGG 59.551 63.158 19.93 1.57 41.91 4.85
243 244 1.068753 CGGATCCTGGCTACTGCAG 59.931 63.158 13.48 13.48 41.91 4.41
244 245 3.094062 GCGGATCCTGGCTACTGCA 62.094 63.158 10.75 0.00 41.91 4.41
245 246 2.280457 GCGGATCCTGGCTACTGC 60.280 66.667 10.75 0.00 38.76 4.40
246 247 2.028190 CGCGGATCCTGGCTACTG 59.972 66.667 10.75 0.00 0.00 2.74
247 248 3.227276 CCGCGGATCCTGGCTACT 61.227 66.667 24.07 0.00 0.00 2.57
248 249 3.214250 CTCCGCGGATCCTGGCTAC 62.214 68.421 31.19 0.00 0.00 3.58
249 250 2.715181 ATCTCCGCGGATCCTGGCTA 62.715 60.000 31.19 2.04 0.00 3.93
250 251 4.841617 TCTCCGCGGATCCTGGCT 62.842 66.667 31.19 0.00 0.00 4.75
251 252 3.620785 ATCTCCGCGGATCCTGGC 61.621 66.667 31.19 5.83 0.00 4.85
252 253 2.341543 CATCTCCGCGGATCCTGG 59.658 66.667 31.19 17.18 0.00 4.45
253 254 2.152297 CTCCATCTCCGCGGATCCTG 62.152 65.000 31.19 23.90 0.00 3.86
254 255 1.905843 CTCCATCTCCGCGGATCCT 60.906 63.158 31.19 13.57 0.00 3.24
255 256 2.653702 CTCCATCTCCGCGGATCC 59.346 66.667 31.19 0.00 0.00 3.36
256 257 2.048690 GCTCCATCTCCGCGGATC 60.049 66.667 31.19 8.11 0.00 3.36
257 258 2.522923 AGCTCCATCTCCGCGGAT 60.523 61.111 31.19 12.87 0.00 4.18
258 259 3.531207 CAGCTCCATCTCCGCGGA 61.531 66.667 29.03 29.03 0.00 5.54
259 260 4.598894 CCAGCTCCATCTCCGCGG 62.599 72.222 22.12 22.12 0.00 6.46
282 283 3.391382 CTCCCAGGGTCCCACGTC 61.391 72.222 11.55 0.00 0.00 4.34
292 293 2.041405 GAGACCCTCCCTCCCAGG 60.041 72.222 0.00 0.00 34.30 4.45
293 294 2.443016 CGAGACCCTCCCTCCCAG 60.443 72.222 0.00 0.00 0.00 4.45
294 295 4.779733 GCGAGACCCTCCCTCCCA 62.780 72.222 0.00 0.00 0.00 4.37
295 296 4.467107 AGCGAGACCCTCCCTCCC 62.467 72.222 0.00 0.00 0.00 4.30
296 297 3.151022 CAGCGAGACCCTCCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
297 298 2.043852 TCAGCGAGACCCTCCCTC 60.044 66.667 0.00 0.00 0.00 4.30
298 299 2.043450 CTCAGCGAGACCCTCCCT 60.043 66.667 0.00 0.00 0.00 4.20
299 300 2.043852 TCTCAGCGAGACCCTCCC 60.044 66.667 4.47 0.00 33.35 4.30
300 301 1.077357 TCTCTCAGCGAGACCCTCC 60.077 63.158 4.47 0.00 43.72 4.30
301 302 0.107410 TCTCTCTCAGCGAGACCCTC 60.107 60.000 4.47 0.00 43.72 4.30
302 303 0.550914 ATCTCTCTCAGCGAGACCCT 59.449 55.000 0.00 0.00 43.72 4.34
303 304 0.667993 CATCTCTCTCAGCGAGACCC 59.332 60.000 0.00 0.00 43.72 4.46
304 305 1.674359 TCATCTCTCTCAGCGAGACC 58.326 55.000 0.00 0.00 43.72 3.85
305 306 3.119673 TGTTTCATCTCTCTCAGCGAGAC 60.120 47.826 0.00 0.00 43.72 3.36
306 307 3.084786 TGTTTCATCTCTCTCAGCGAGA 58.915 45.455 0.00 0.00 46.32 4.04
307 308 3.500558 TGTTTCATCTCTCTCAGCGAG 57.499 47.619 0.00 0.00 41.30 5.03
308 309 3.942130 TTGTTTCATCTCTCTCAGCGA 57.058 42.857 0.00 0.00 0.00 4.93
309 310 4.240888 TCTTTGTTTCATCTCTCTCAGCG 58.759 43.478 0.00 0.00 0.00 5.18
310 311 6.426328 TCTTTCTTTGTTTCATCTCTCTCAGC 59.574 38.462 0.00 0.00 0.00 4.26
311 312 7.959689 TCTTTCTTTGTTTCATCTCTCTCAG 57.040 36.000 0.00 0.00 0.00 3.35
312 313 8.737168 TTTCTTTCTTTGTTTCATCTCTCTCA 57.263 30.769 0.00 0.00 0.00 3.27
313 314 9.050601 TCTTTCTTTCTTTGTTTCATCTCTCTC 57.949 33.333 0.00 0.00 0.00 3.20
314 315 8.970859 TCTTTCTTTCTTTGTTTCATCTCTCT 57.029 30.769 0.00 0.00 0.00 3.10
325 326 9.166173 CCCAATTTTCTTTCTTTCTTTCTTTGT 57.834 29.630 0.00 0.00 0.00 2.83
326 327 9.166173 ACCCAATTTTCTTTCTTTCTTTCTTTG 57.834 29.630 0.00 0.00 0.00 2.77
327 328 9.166173 CACCCAATTTTCTTTCTTTCTTTCTTT 57.834 29.630 0.00 0.00 0.00 2.52
328 329 7.770433 CCACCCAATTTTCTTTCTTTCTTTCTT 59.230 33.333 0.00 0.00 0.00 2.52
329 330 7.275183 CCACCCAATTTTCTTTCTTTCTTTCT 58.725 34.615 0.00 0.00 0.00 2.52
330 331 6.483307 CCCACCCAATTTTCTTTCTTTCTTTC 59.517 38.462 0.00 0.00 0.00 2.62
331 332 6.069673 ACCCACCCAATTTTCTTTCTTTCTTT 60.070 34.615 0.00 0.00 0.00 2.52
332 333 5.428457 ACCCACCCAATTTTCTTTCTTTCTT 59.572 36.000 0.00 0.00 0.00 2.52
333 334 4.968719 ACCCACCCAATTTTCTTTCTTTCT 59.031 37.500 0.00 0.00 0.00 2.52
334 335 5.290493 ACCCACCCAATTTTCTTTCTTTC 57.710 39.130 0.00 0.00 0.00 2.62
335 336 4.202212 CGACCCACCCAATTTTCTTTCTTT 60.202 41.667 0.00 0.00 0.00 2.52
336 337 3.320826 CGACCCACCCAATTTTCTTTCTT 59.679 43.478 0.00 0.00 0.00 2.52
337 338 2.890945 CGACCCACCCAATTTTCTTTCT 59.109 45.455 0.00 0.00 0.00 2.52
338 339 2.029380 CCGACCCACCCAATTTTCTTTC 60.029 50.000 0.00 0.00 0.00 2.62
339 340 1.967779 CCGACCCACCCAATTTTCTTT 59.032 47.619 0.00 0.00 0.00 2.52
340 341 1.627864 CCGACCCACCCAATTTTCTT 58.372 50.000 0.00 0.00 0.00 2.52
341 342 0.251608 CCCGACCCACCCAATTTTCT 60.252 55.000 0.00 0.00 0.00 2.52
342 343 0.541063 ACCCGACCCACCCAATTTTC 60.541 55.000 0.00 0.00 0.00 2.29
343 344 0.541063 GACCCGACCCACCCAATTTT 60.541 55.000 0.00 0.00 0.00 1.82
344 345 1.076014 GACCCGACCCACCCAATTT 59.924 57.895 0.00 0.00 0.00 1.82
345 346 2.761160 GACCCGACCCACCCAATT 59.239 61.111 0.00 0.00 0.00 2.32
346 347 3.335729 GGACCCGACCCACCCAAT 61.336 66.667 0.00 0.00 0.00 3.16
367 368 0.234884 GAAACAAACTGGAGCGACCG 59.765 55.000 0.00 0.00 42.61 4.79
368 369 0.234884 CGAAACAAACTGGAGCGACC 59.765 55.000 0.00 0.00 39.54 4.79
369 370 0.935196 ACGAAACAAACTGGAGCGAC 59.065 50.000 0.00 0.00 0.00 5.19
370 371 1.329292 CAACGAAACAAACTGGAGCGA 59.671 47.619 0.00 0.00 0.00 4.93
371 372 1.596954 CCAACGAAACAAACTGGAGCG 60.597 52.381 0.00 0.00 0.00 5.03
372 373 1.673920 TCCAACGAAACAAACTGGAGC 59.326 47.619 0.00 0.00 32.42 4.70
373 374 3.363970 CGATCCAACGAAACAAACTGGAG 60.364 47.826 0.00 0.00 39.47 3.86
374 375 2.546368 CGATCCAACGAAACAAACTGGA 59.454 45.455 0.00 0.00 40.36 3.86
375 376 2.546368 TCGATCCAACGAAACAAACTGG 59.454 45.455 0.00 0.00 39.34 4.00
376 377 3.870723 TCGATCCAACGAAACAAACTG 57.129 42.857 0.00 0.00 39.34 3.16
385 386 1.100510 ACTCCGATTCGATCCAACGA 58.899 50.000 7.83 0.00 40.55 3.85
386 387 2.768833 TACTCCGATTCGATCCAACG 57.231 50.000 7.83 0.00 0.00 4.10
387 388 5.789710 TTTTTACTCCGATTCGATCCAAC 57.210 39.130 7.83 0.00 0.00 3.77
408 409 4.737765 CACATGTCGTCGTTTTCCATTTTT 59.262 37.500 0.00 0.00 0.00 1.94
409 410 4.286910 CACATGTCGTCGTTTTCCATTTT 58.713 39.130 0.00 0.00 0.00 1.82
410 411 3.851838 GCACATGTCGTCGTTTTCCATTT 60.852 43.478 0.00 0.00 0.00 2.32
411 412 2.350388 GCACATGTCGTCGTTTTCCATT 60.350 45.455 0.00 0.00 0.00 3.16
412 413 1.196808 GCACATGTCGTCGTTTTCCAT 59.803 47.619 0.00 0.00 0.00 3.41
413 414 0.584396 GCACATGTCGTCGTTTTCCA 59.416 50.000 0.00 0.00 0.00 3.53
414 415 0.865769 AGCACATGTCGTCGTTTTCC 59.134 50.000 0.00 0.00 0.00 3.13
415 416 1.937359 CAGCACATGTCGTCGTTTTC 58.063 50.000 0.00 0.00 0.00 2.29
416 417 0.041312 GCAGCACATGTCGTCGTTTT 60.041 50.000 0.00 0.00 0.00 2.43
417 418 1.569493 GCAGCACATGTCGTCGTTT 59.431 52.632 0.00 0.00 0.00 3.60
418 419 2.657757 CGCAGCACATGTCGTCGTT 61.658 57.895 0.00 0.00 0.00 3.85
419 420 3.105782 CGCAGCACATGTCGTCGT 61.106 61.111 0.00 0.00 0.00 4.34
420 421 3.842126 CCGCAGCACATGTCGTCG 61.842 66.667 0.00 0.00 0.00 5.12
421 422 2.432456 TCCGCAGCACATGTCGTC 60.432 61.111 0.00 0.00 0.00 4.20
422 423 2.433145 CTCCGCAGCACATGTCGT 60.433 61.111 0.00 0.00 0.00 4.34
423 424 3.857854 GCTCCGCAGCACATGTCG 61.858 66.667 0.00 0.00 46.06 4.35
435 436 3.425938 GATTGAAGTGCGCGCTCCG 62.426 63.158 33.29 0.00 40.75 4.63
436 437 2.390599 TGATTGAAGTGCGCGCTCC 61.391 57.895 33.29 22.14 0.00 4.70
437 438 1.225854 GTGATTGAAGTGCGCGCTC 60.226 57.895 33.29 28.81 0.00 5.03
438 439 2.863153 GTGATTGAAGTGCGCGCT 59.137 55.556 33.29 19.72 0.00 5.92
439 440 2.571611 CGTGATTGAAGTGCGCGC 60.572 61.111 27.26 27.26 0.00 6.86
440 441 1.507713 CACGTGATTGAAGTGCGCG 60.508 57.895 10.90 0.00 40.92 6.86
441 442 4.422506 CACGTGATTGAAGTGCGC 57.577 55.556 10.90 0.00 0.00 6.09
444 445 1.198408 AGCATGCACGTGATTGAAGTG 59.802 47.619 22.23 7.23 37.14 3.16
445 446 1.198408 CAGCATGCACGTGATTGAAGT 59.802 47.619 22.23 1.41 0.00 3.01
446 447 1.465777 TCAGCATGCACGTGATTGAAG 59.534 47.619 22.23 11.04 34.76 3.02
447 448 1.465777 CTCAGCATGCACGTGATTGAA 59.534 47.619 22.23 0.00 34.76 2.69
448 449 1.081094 CTCAGCATGCACGTGATTGA 58.919 50.000 22.23 11.74 34.76 2.57
449 450 1.062148 CTCTCAGCATGCACGTGATTG 59.938 52.381 22.23 16.29 34.76 2.67
450 451 1.366679 CTCTCAGCATGCACGTGATT 58.633 50.000 22.23 1.60 34.76 2.57
451 452 1.088340 GCTCTCAGCATGCACGTGAT 61.088 55.000 22.23 7.22 41.89 3.06
452 453 1.739196 GCTCTCAGCATGCACGTGA 60.739 57.895 22.23 14.01 41.89 4.35
453 454 2.747822 GGCTCTCAGCATGCACGTG 61.748 63.158 21.98 12.28 44.75 4.49
454 455 2.435586 GGCTCTCAGCATGCACGT 60.436 61.111 21.98 0.00 44.75 4.49
455 456 2.125229 AGGCTCTCAGCATGCACG 60.125 61.111 21.98 10.81 44.75 5.34
456 457 1.818785 GGAGGCTCTCAGCATGCAC 60.819 63.158 21.98 1.37 42.91 4.57
457 458 1.969200 GAGGAGGCTCTCAGCATGCA 61.969 60.000 21.98 0.00 45.83 3.96
458 459 1.227615 GAGGAGGCTCTCAGCATGC 60.228 63.158 15.23 10.51 43.74 4.06
459 460 1.614903 CTAGAGGAGGCTCTCAGCATG 59.385 57.143 15.23 0.00 44.75 4.06
460 461 1.999648 CTAGAGGAGGCTCTCAGCAT 58.000 55.000 15.23 0.00 44.75 3.79
461 462 0.754957 GCTAGAGGAGGCTCTCAGCA 60.755 60.000 15.23 0.00 44.75 4.41
462 463 0.468029 AGCTAGAGGAGGCTCTCAGC 60.468 60.000 15.23 16.19 41.46 4.26
463 464 3.827505 AGCTAGAGGAGGCTCTCAG 57.172 57.895 15.23 7.53 36.30 3.35
468 469 0.338120 ACTTGGAGCTAGAGGAGGCT 59.662 55.000 0.00 0.00 41.88 4.58
469 470 1.960689 CTACTTGGAGCTAGAGGAGGC 59.039 57.143 0.00 0.00 0.00 4.70
470 471 3.306472 ACTACTTGGAGCTAGAGGAGG 57.694 52.381 0.00 0.00 0.00 4.30
471 472 5.043737 AGTACTACTTGGAGCTAGAGGAG 57.956 47.826 0.00 0.00 0.00 3.69
472 473 4.722781 AGAGTACTACTTGGAGCTAGAGGA 59.277 45.833 0.00 0.00 0.00 3.71
473 474 5.043737 AGAGTACTACTTGGAGCTAGAGG 57.956 47.826 0.00 0.00 0.00 3.69
486 487 4.512484 AGACCAACGGAGTAGAGTACTAC 58.488 47.826 0.00 0.00 45.00 2.73
487 488 4.679106 CGAGACCAACGGAGTAGAGTACTA 60.679 50.000 0.00 0.00 45.00 1.82
488 489 3.608796 GAGACCAACGGAGTAGAGTACT 58.391 50.000 0.00 0.00 45.00 2.73
489 490 2.351111 CGAGACCAACGGAGTAGAGTAC 59.649 54.545 0.00 0.00 45.00 2.73
490 491 2.625737 CGAGACCAACGGAGTAGAGTA 58.374 52.381 0.00 0.00 45.00 2.59
491 492 1.451067 CGAGACCAACGGAGTAGAGT 58.549 55.000 0.00 0.00 45.00 3.24
500 501 4.760047 CTGGCCCCGAGACCAACG 62.760 72.222 0.00 0.00 34.96 4.10
501 502 4.410400 CCTGGCCCCGAGACCAAC 62.410 72.222 0.00 0.00 34.96 3.77
502 503 4.649705 TCCTGGCCCCGAGACCAA 62.650 66.667 0.00 0.00 34.96 3.67
505 506 4.779733 TCCTCCTGGCCCCGAGAC 62.780 72.222 15.97 0.00 0.00 3.36
506 507 4.465446 CTCCTCCTGGCCCCGAGA 62.465 72.222 15.97 0.00 0.00 4.04
509 510 4.860881 TAGCTCCTCCTGGCCCCG 62.861 72.222 0.00 0.00 0.00 5.73
510 511 3.164977 GTAGCTCCTCCTGGCCCC 61.165 72.222 0.00 0.00 0.00 5.80
511 512 3.541713 CGTAGCTCCTCCTGGCCC 61.542 72.222 0.00 0.00 0.00 5.80
524 525 8.358148 TCTAGTATTATCCCTTTTTCAGCGTAG 58.642 37.037 0.00 0.00 0.00 3.51
525 526 8.139989 GTCTAGTATTATCCCTTTTTCAGCGTA 58.860 37.037 0.00 0.00 0.00 4.42
526 527 6.985059 GTCTAGTATTATCCCTTTTTCAGCGT 59.015 38.462 0.00 0.00 0.00 5.07
527 528 7.210873 AGTCTAGTATTATCCCTTTTTCAGCG 58.789 38.462 0.00 0.00 0.00 5.18
528 529 8.204836 TGAGTCTAGTATTATCCCTTTTTCAGC 58.795 37.037 0.00 0.00 0.00 4.26
529 530 9.535878 GTGAGTCTAGTATTATCCCTTTTTCAG 57.464 37.037 0.00 0.00 0.00 3.02
530 531 8.195436 CGTGAGTCTAGTATTATCCCTTTTTCA 58.805 37.037 0.00 0.00 0.00 2.69
531 532 7.652507 CCGTGAGTCTAGTATTATCCCTTTTTC 59.347 40.741 0.00 0.00 0.00 2.29
532 533 7.418712 CCCGTGAGTCTAGTATTATCCCTTTTT 60.419 40.741 0.00 0.00 0.00 1.94
533 534 6.041751 CCCGTGAGTCTAGTATTATCCCTTTT 59.958 42.308 0.00 0.00 0.00 2.27
534 535 5.539193 CCCGTGAGTCTAGTATTATCCCTTT 59.461 44.000 0.00 0.00 0.00 3.11
535 536 5.078256 CCCGTGAGTCTAGTATTATCCCTT 58.922 45.833 0.00 0.00 0.00 3.95
536 537 4.664392 CCCGTGAGTCTAGTATTATCCCT 58.336 47.826 0.00 0.00 0.00 4.20
537 538 3.193056 GCCCGTGAGTCTAGTATTATCCC 59.807 52.174 0.00 0.00 0.00 3.85
538 539 4.080687 AGCCCGTGAGTCTAGTATTATCC 58.919 47.826 0.00 0.00 0.00 2.59
539 540 4.156373 GGAGCCCGTGAGTCTAGTATTATC 59.844 50.000 0.00 0.00 0.00 1.75
540 541 4.080687 GGAGCCCGTGAGTCTAGTATTAT 58.919 47.826 0.00 0.00 0.00 1.28
541 542 3.137913 AGGAGCCCGTGAGTCTAGTATTA 59.862 47.826 0.00 0.00 0.00 0.98
542 543 2.091775 AGGAGCCCGTGAGTCTAGTATT 60.092 50.000 0.00 0.00 0.00 1.89
543 544 1.495574 AGGAGCCCGTGAGTCTAGTAT 59.504 52.381 0.00 0.00 0.00 2.12
544 545 0.917533 AGGAGCCCGTGAGTCTAGTA 59.082 55.000 0.00 0.00 0.00 1.82
545 546 0.039911 AAGGAGCCCGTGAGTCTAGT 59.960 55.000 0.00 0.00 0.00 2.57
546 547 0.741915 GAAGGAGCCCGTGAGTCTAG 59.258 60.000 0.00 0.00 0.00 2.43
547 548 0.039180 TGAAGGAGCCCGTGAGTCTA 59.961 55.000 0.00 0.00 0.00 2.59
548 549 0.832135 TTGAAGGAGCCCGTGAGTCT 60.832 55.000 0.00 0.00 0.00 3.24
549 550 0.670854 GTTGAAGGAGCCCGTGAGTC 60.671 60.000 0.00 0.00 0.00 3.36
550 551 1.371558 GTTGAAGGAGCCCGTGAGT 59.628 57.895 0.00 0.00 0.00 3.41
551 552 1.738099 CGTTGAAGGAGCCCGTGAG 60.738 63.158 0.00 0.00 0.00 3.51
552 553 2.342279 CGTTGAAGGAGCCCGTGA 59.658 61.111 0.00 0.00 0.00 4.35
553 554 2.742372 CCGTTGAAGGAGCCCGTG 60.742 66.667 0.00 0.00 0.00 4.94
554 555 2.920912 TCCGTTGAAGGAGCCCGT 60.921 61.111 0.00 0.00 34.92 5.28
555 556 2.434359 GTCCGTTGAAGGAGCCCG 60.434 66.667 0.00 0.00 41.68 6.13
559 560 2.334838 CGTAAAGGTCCGTTGAAGGAG 58.665 52.381 0.00 0.00 41.68 3.69
560 561 1.001181 CCGTAAAGGTCCGTTGAAGGA 59.999 52.381 0.00 0.00 38.11 3.36
561 562 1.001181 TCCGTAAAGGTCCGTTGAAGG 59.999 52.381 0.00 1.54 41.99 3.46
562 563 2.288640 ACTCCGTAAAGGTCCGTTGAAG 60.289 50.000 0.00 0.00 41.99 3.02
563 564 1.688197 ACTCCGTAAAGGTCCGTTGAA 59.312 47.619 0.00 0.00 41.99 2.69
564 565 1.000060 CACTCCGTAAAGGTCCGTTGA 60.000 52.381 0.00 0.00 41.99 3.18
565 566 1.425412 CACTCCGTAAAGGTCCGTTG 58.575 55.000 0.00 0.00 41.99 4.10
566 567 0.319405 CCACTCCGTAAAGGTCCGTT 59.681 55.000 0.00 0.00 41.99 4.44
567 568 1.969862 CCACTCCGTAAAGGTCCGT 59.030 57.895 0.00 0.00 41.99 4.69
568 569 1.447314 GCCACTCCGTAAAGGTCCG 60.447 63.158 0.00 0.00 41.99 4.79
569 570 1.078637 GGCCACTCCGTAAAGGTCC 60.079 63.158 0.00 0.00 41.99 4.46
570 571 1.134877 GTAGGCCACTCCGTAAAGGTC 60.135 57.143 5.01 0.00 41.99 3.85
571 572 0.900421 GTAGGCCACTCCGTAAAGGT 59.100 55.000 5.01 0.00 41.99 3.50
572 573 0.179119 CGTAGGCCACTCCGTAAAGG 60.179 60.000 5.01 0.00 40.77 3.11
573 574 0.529378 ACGTAGGCCACTCCGTAAAG 59.471 55.000 5.01 0.00 37.52 1.85
574 575 0.527565 GACGTAGGCCACTCCGTAAA 59.472 55.000 5.01 0.00 39.50 2.01
575 576 0.322816 AGACGTAGGCCACTCCGTAA 60.323 55.000 5.01 0.00 39.50 3.18
576 577 0.541392 TAGACGTAGGCCACTCCGTA 59.459 55.000 5.01 0.00 39.50 4.02
577 578 1.028868 GTAGACGTAGGCCACTCCGT 61.029 60.000 5.01 7.17 42.25 4.69
578 579 1.726265 GTAGACGTAGGCCACTCCG 59.274 63.158 5.01 3.38 40.77 4.63
579 580 1.726265 CGTAGACGTAGGCCACTCC 59.274 63.158 5.01 0.00 34.11 3.85
590 591 1.306148 TAGGAGATGGCACGTAGACG 58.694 55.000 0.00 0.00 46.33 4.18
591 592 4.323553 AATTAGGAGATGGCACGTAGAC 57.676 45.455 0.00 0.00 0.00 2.59
592 593 4.693283 CAAATTAGGAGATGGCACGTAGA 58.307 43.478 0.00 0.00 0.00 2.59
593 594 3.248602 GCAAATTAGGAGATGGCACGTAG 59.751 47.826 0.00 0.00 0.00 3.51
594 595 3.202906 GCAAATTAGGAGATGGCACGTA 58.797 45.455 0.00 0.00 0.00 3.57
595 596 2.017049 GCAAATTAGGAGATGGCACGT 58.983 47.619 0.00 0.00 0.00 4.49
596 597 1.334869 GGCAAATTAGGAGATGGCACG 59.665 52.381 0.00 0.00 38.16 5.34
597 598 1.683385 GGGCAAATTAGGAGATGGCAC 59.317 52.381 0.00 0.00 39.84 5.01
598 599 1.411501 GGGGCAAATTAGGAGATGGCA 60.412 52.381 0.00 0.00 39.84 4.92
599 600 1.332195 GGGGCAAATTAGGAGATGGC 58.668 55.000 0.00 0.00 37.60 4.40
600 601 2.001076 GGGGGCAAATTAGGAGATGG 57.999 55.000 0.00 0.00 0.00 3.51
617 618 3.175133 CCAGAGTGAAAATCGGGGG 57.825 57.895 0.00 0.00 42.60 5.40
619 620 1.032114 GCCCCAGAGTGAAAATCGGG 61.032 60.000 0.00 0.00 45.91 5.14
620 621 1.032114 GGCCCCAGAGTGAAAATCGG 61.032 60.000 0.00 0.00 35.11 4.18
621 622 0.035056 AGGCCCCAGAGTGAAAATCG 60.035 55.000 0.00 0.00 35.11 3.34
622 623 1.467920 CAGGCCCCAGAGTGAAAATC 58.532 55.000 0.00 0.00 0.00 2.17
623 624 0.613012 GCAGGCCCCAGAGTGAAAAT 60.613 55.000 0.00 0.00 0.00 1.82
624 625 1.228552 GCAGGCCCCAGAGTGAAAA 60.229 57.895 0.00 0.00 0.00 2.29
625 626 2.436109 GCAGGCCCCAGAGTGAAA 59.564 61.111 0.00 0.00 0.00 2.69
626 627 4.020617 CGCAGGCCCCAGAGTGAA 62.021 66.667 0.00 0.00 0.00 3.18
628 629 4.020617 TTCGCAGGCCCCAGAGTG 62.021 66.667 0.00 0.00 0.00 3.51
629 630 4.021925 GTTCGCAGGCCCCAGAGT 62.022 66.667 0.00 0.00 0.00 3.24
630 631 4.785453 GGTTCGCAGGCCCCAGAG 62.785 72.222 0.00 0.00 0.00 3.35
632 633 2.478335 TTAAGGTTCGCAGGCCCCAG 62.478 60.000 0.00 0.00 0.00 4.45
633 634 1.858739 ATTAAGGTTCGCAGGCCCCA 61.859 55.000 0.00 0.00 0.00 4.96
634 635 0.683179 AATTAAGGTTCGCAGGCCCC 60.683 55.000 0.00 0.00 0.00 5.80
635 636 2.047002 TAATTAAGGTTCGCAGGCCC 57.953 50.000 0.00 0.00 0.00 5.80
636 637 4.499188 GGATTTAATTAAGGTTCGCAGGCC 60.499 45.833 0.00 0.00 0.00 5.19
637 638 4.338400 AGGATTTAATTAAGGTTCGCAGGC 59.662 41.667 0.00 0.00 0.00 4.85
638 639 5.221048 CCAGGATTTAATTAAGGTTCGCAGG 60.221 44.000 0.00 0.00 0.00 4.85
639 640 5.733373 GCCAGGATTTAATTAAGGTTCGCAG 60.733 44.000 0.00 0.00 0.00 5.18
640 641 4.097286 GCCAGGATTTAATTAAGGTTCGCA 59.903 41.667 0.00 0.00 0.00 5.10
641 642 4.097286 TGCCAGGATTTAATTAAGGTTCGC 59.903 41.667 0.00 0.00 0.00 4.70
642 643 5.828299 TGCCAGGATTTAATTAAGGTTCG 57.172 39.130 0.00 0.00 0.00 3.95
643 644 7.170393 AGTTGCCAGGATTTAATTAAGGTTC 57.830 36.000 0.00 0.00 0.00 3.62
644 645 8.658840 TTAGTTGCCAGGATTTAATTAAGGTT 57.341 30.769 0.00 0.00 0.00 3.50
645 646 8.838649 ATTAGTTGCCAGGATTTAATTAAGGT 57.161 30.769 0.00 0.00 0.00 3.50
654 655 9.474313 TTGATTAAGTATTAGTTGCCAGGATTT 57.526 29.630 0.00 0.00 0.00 2.17
655 656 8.903820 GTTGATTAAGTATTAGTTGCCAGGATT 58.096 33.333 0.00 0.00 0.00 3.01
656 657 7.502561 GGTTGATTAAGTATTAGTTGCCAGGAT 59.497 37.037 0.00 0.00 0.00 3.24
657 658 6.826741 GGTTGATTAAGTATTAGTTGCCAGGA 59.173 38.462 0.00 0.00 0.00 3.86
658 659 6.039382 GGGTTGATTAAGTATTAGTTGCCAGG 59.961 42.308 0.00 0.00 0.00 4.45
659 660 6.238374 CGGGTTGATTAAGTATTAGTTGCCAG 60.238 42.308 0.00 0.00 0.00 4.85
660 661 5.587043 CGGGTTGATTAAGTATTAGTTGCCA 59.413 40.000 0.00 0.00 0.00 4.92
661 662 5.008316 CCGGGTTGATTAAGTATTAGTTGCC 59.992 44.000 0.00 0.00 0.00 4.52
662 663 5.587443 ACCGGGTTGATTAAGTATTAGTTGC 59.413 40.000 6.32 0.00 0.00 4.17
663 664 8.721019 TTACCGGGTTGATTAAGTATTAGTTG 57.279 34.615 4.31 0.00 0.00 3.16
664 665 9.166173 GTTTACCGGGTTGATTAAGTATTAGTT 57.834 33.333 4.31 0.00 0.00 2.24
665 666 8.542926 AGTTTACCGGGTTGATTAAGTATTAGT 58.457 33.333 4.31 0.00 0.00 2.24
666 667 8.953368 AGTTTACCGGGTTGATTAAGTATTAG 57.047 34.615 4.31 0.00 0.00 1.73
667 668 7.986889 GGAGTTTACCGGGTTGATTAAGTATTA 59.013 37.037 4.31 0.00 0.00 0.98
668 669 6.825213 GGAGTTTACCGGGTTGATTAAGTATT 59.175 38.462 4.31 0.00 0.00 1.89
669 670 6.351711 GGAGTTTACCGGGTTGATTAAGTAT 58.648 40.000 4.31 0.00 0.00 2.12
670 671 5.338300 GGGAGTTTACCGGGTTGATTAAGTA 60.338 44.000 4.31 0.00 0.00 2.24
671 672 4.566278 GGGAGTTTACCGGGTTGATTAAGT 60.566 45.833 4.31 0.00 0.00 2.24
672 673 3.943381 GGGAGTTTACCGGGTTGATTAAG 59.057 47.826 4.31 0.00 0.00 1.85
673 674 3.308331 GGGGAGTTTACCGGGTTGATTAA 60.308 47.826 4.31 0.00 0.00 1.40
674 675 2.239402 GGGGAGTTTACCGGGTTGATTA 59.761 50.000 4.31 0.00 0.00 1.75
675 676 1.005097 GGGGAGTTTACCGGGTTGATT 59.995 52.381 4.31 0.00 0.00 2.57
676 677 0.622136 GGGGAGTTTACCGGGTTGAT 59.378 55.000 4.31 0.00 0.00 2.57
677 678 1.829523 CGGGGAGTTTACCGGGTTGA 61.830 60.000 4.31 0.00 46.08 3.18
678 679 1.376295 CGGGGAGTTTACCGGGTTG 60.376 63.158 4.31 0.00 46.08 3.77
679 680 3.071575 CGGGGAGTTTACCGGGTT 58.928 61.111 4.31 0.00 46.08 4.11
684 685 1.297689 GGTCCACGGGGAGTTTACC 59.702 63.158 6.67 0.00 46.12 2.85
685 686 1.297689 GGGTCCACGGGGAGTTTAC 59.702 63.158 6.67 0.00 46.12 2.01
686 687 1.919816 GGGGTCCACGGGGAGTTTA 60.920 63.158 6.67 0.00 46.12 2.01
687 688 3.254617 GGGGTCCACGGGGAGTTT 61.255 66.667 6.67 0.00 46.12 2.66
702 703 0.744414 CAATGCTACACTCACGGGGG 60.744 60.000 0.00 0.00 0.00 5.40
703 704 1.369091 GCAATGCTACACTCACGGGG 61.369 60.000 0.00 0.00 0.00 5.73
704 705 1.369091 GGCAATGCTACACTCACGGG 61.369 60.000 4.82 0.00 0.00 5.28
705 706 1.369091 GGGCAATGCTACACTCACGG 61.369 60.000 4.82 0.00 0.00 4.94
706 707 1.369091 GGGGCAATGCTACACTCACG 61.369 60.000 4.82 0.00 0.00 4.35
707 708 0.035056 AGGGGCAATGCTACACTCAC 60.035 55.000 4.82 0.00 0.00 3.51
708 709 0.035152 CAGGGGCAATGCTACACTCA 60.035 55.000 4.82 0.00 0.00 3.41
709 710 0.253044 TCAGGGGCAATGCTACACTC 59.747 55.000 4.82 0.00 0.00 3.51
710 711 0.698238 TTCAGGGGCAATGCTACACT 59.302 50.000 4.82 0.00 0.00 3.55
711 712 1.544724 TTTCAGGGGCAATGCTACAC 58.455 50.000 4.82 0.00 0.00 2.90
712 713 2.300956 TTTTCAGGGGCAATGCTACA 57.699 45.000 4.82 0.00 0.00 2.74
713 714 2.825532 TCTTTTTCAGGGGCAATGCTAC 59.174 45.455 4.82 0.00 0.00 3.58
714 715 2.825532 GTCTTTTTCAGGGGCAATGCTA 59.174 45.455 4.82 0.00 0.00 3.49
715 716 1.620323 GTCTTTTTCAGGGGCAATGCT 59.380 47.619 4.82 0.00 0.00 3.79
716 717 1.338105 GGTCTTTTTCAGGGGCAATGC 60.338 52.381 0.00 0.00 0.00 3.56
717 718 1.276138 GGGTCTTTTTCAGGGGCAATG 59.724 52.381 0.00 0.00 0.00 2.82
718 719 1.644509 GGGTCTTTTTCAGGGGCAAT 58.355 50.000 0.00 0.00 0.00 3.56
719 720 0.471022 GGGGTCTTTTTCAGGGGCAA 60.471 55.000 0.00 0.00 0.00 4.52
720 721 1.155155 GGGGTCTTTTTCAGGGGCA 59.845 57.895 0.00 0.00 0.00 5.36
721 722 1.609501 GGGGGTCTTTTTCAGGGGC 60.610 63.158 0.00 0.00 0.00 5.80
722 723 4.865629 GGGGGTCTTTTTCAGGGG 57.134 61.111 0.00 0.00 0.00 4.79
778 779 0.033208 GGAGATGCCCACCAATCCAA 60.033 55.000 0.00 0.00 34.89 3.53
779 780 1.213619 TGGAGATGCCCACCAATCCA 61.214 55.000 0.00 0.00 39.64 3.41
780 781 1.614711 TGGAGATGCCCACCAATCC 59.385 57.895 0.00 0.00 35.17 3.01
808 809 2.253758 GCAGAGCAGTGTTGGCGAA 61.254 57.895 0.00 0.00 36.08 4.70
809 810 2.666190 GCAGAGCAGTGTTGGCGA 60.666 61.111 0.00 0.00 36.08 5.54
810 811 2.667536 AGCAGAGCAGTGTTGGCG 60.668 61.111 0.00 0.00 36.08 5.69
811 812 1.302351 AGAGCAGAGCAGTGTTGGC 60.302 57.895 0.00 0.00 0.00 4.52
812 813 1.575576 GCAGAGCAGAGCAGTGTTGG 61.576 60.000 0.00 0.00 0.00 3.77
813 814 1.575576 GGCAGAGCAGAGCAGTGTTG 61.576 60.000 0.00 0.00 0.00 3.33
814 815 1.302351 GGCAGAGCAGAGCAGTGTT 60.302 57.895 0.00 0.00 0.00 3.32
893 903 4.130118 GTGGATGACAGATATTGGTGGAC 58.870 47.826 0.00 0.00 0.00 4.02
908 918 4.968719 ACTATGTAATGGAGTGGTGGATGA 59.031 41.667 0.00 0.00 0.00 2.92
950 971 2.744768 CGCTTCGAGGCTTTGCTCC 61.745 63.158 18.01 0.00 0.00 4.70
955 976 2.432628 CCGTCGCTTCGAGGCTTT 60.433 61.111 18.01 0.00 39.87 3.51
1027 1048 1.592669 CCATTGGGACGAGCTAGCG 60.593 63.158 9.55 0.00 35.59 4.26
1416 1437 0.465824 CCTCCCAGGAGTCGTCGTAT 60.466 60.000 12.65 0.00 37.67 3.06
1492 1525 2.504244 GAAGTCGCCGTGGTCGAG 60.504 66.667 5.82 0.00 39.71 4.04
1599 1638 4.856801 CCCTTGATGCCGACCCCG 62.857 72.222 0.00 0.00 0.00 5.73
1600 1639 4.506255 CCCCTTGATGCCGACCCC 62.506 72.222 0.00 0.00 0.00 4.95
1601 1640 4.506255 CCCCCTTGATGCCGACCC 62.506 72.222 0.00 0.00 0.00 4.46
1618 1657 1.895020 TAGGGGTGCACCACGATGAC 61.895 60.000 35.78 17.15 46.41 3.06
1961 2000 1.059835 GCAACTCGATCGCTTTCTCAC 59.940 52.381 11.09 0.00 0.00 3.51
1962 2001 1.336795 TGCAACTCGATCGCTTTCTCA 60.337 47.619 11.09 1.04 0.00 3.27
2024 2066 2.671619 CCTTTCCTTTGCCGGCGA 60.672 61.111 23.90 19.26 0.00 5.54
2111 2172 3.499157 CGACGGACAACAAATTAAAGGGA 59.501 43.478 0.00 0.00 0.00 4.20
2113 2174 3.251487 ACCGACGGACAACAAATTAAAGG 59.749 43.478 23.38 0.00 0.00 3.11
2114 2175 4.477302 ACCGACGGACAACAAATTAAAG 57.523 40.909 23.38 0.00 0.00 1.85
2116 2177 5.106634 CCATAACCGACGGACAACAAATTAA 60.107 40.000 23.38 0.00 0.00 1.40
2117 2178 4.392445 CCATAACCGACGGACAACAAATTA 59.608 41.667 23.38 6.33 0.00 1.40
2118 2179 3.189702 CCATAACCGACGGACAACAAATT 59.810 43.478 23.38 3.96 0.00 1.82
2128 2191 1.588139 GCGAGACCATAACCGACGG 60.588 63.158 13.61 13.61 0.00 4.79
2130 2193 1.588139 CGGCGAGACCATAACCGAC 60.588 63.158 0.00 0.00 46.71 4.79
2158 2221 6.569226 GCCATGGTATTGAGATAAACATCAGC 60.569 42.308 14.67 0.00 0.00 4.26
2206 2274 3.306703 ACAAAAGTTCAGCGCAAATTGTG 59.693 39.130 11.47 9.72 0.00 3.33
2215 2283 5.916883 AGATGATTGAAACAAAAGTTCAGCG 59.083 36.000 0.00 0.00 36.41 5.18
2330 2410 4.586001 AGATGCCCTTACAATGCAAATAGG 59.414 41.667 0.00 0.00 38.69 2.57
2331 2411 5.278660 GGAGATGCCCTTACAATGCAAATAG 60.279 44.000 0.00 0.00 38.69 1.73
2336 2416 1.284491 TGGAGATGCCCTTACAATGCA 59.716 47.619 0.00 0.00 39.68 3.96
2338 2418 2.355756 CGTTGGAGATGCCCTTACAATG 59.644 50.000 0.00 0.00 34.97 2.82
2339 2419 2.643551 CGTTGGAGATGCCCTTACAAT 58.356 47.619 0.00 0.00 34.97 2.71
2354 2434 2.203422 TTTGAGGGTGGGCGTTGG 60.203 61.111 0.00 0.00 0.00 3.77
2367 2447 2.437002 GTATGCGGGGCGGTTTGA 60.437 61.111 0.00 0.00 0.00 2.69
2368 2448 3.871574 CGTATGCGGGGCGGTTTG 61.872 66.667 0.00 0.00 0.00 2.93
2381 2461 2.603135 CTTTCGCGGTCCGGACGTAT 62.603 60.000 27.68 0.00 37.59 3.06
2384 2464 4.712425 ACTTTCGCGGTCCGGACG 62.712 66.667 27.68 22.43 37.59 4.79
2388 2468 1.011968 TTGATGACTTTCGCGGTCCG 61.012 55.000 6.99 6.99 38.61 4.79
2389 2469 0.442699 GTTGATGACTTTCGCGGTCC 59.557 55.000 6.13 0.00 33.22 4.46
2401 2481 8.602424 TGTAAAATAAGGGAGAGAAGTTGATGA 58.398 33.333 0.00 0.00 0.00 2.92
2406 2486 8.523658 GCAAATGTAAAATAAGGGAGAGAAGTT 58.476 33.333 0.00 0.00 0.00 2.66
2408 2488 7.970614 GTGCAAATGTAAAATAAGGGAGAGAAG 59.029 37.037 0.00 0.00 0.00 2.85
2409 2489 7.093945 GGTGCAAATGTAAAATAAGGGAGAGAA 60.094 37.037 0.00 0.00 0.00 2.87
2410 2490 6.377146 GGTGCAAATGTAAAATAAGGGAGAGA 59.623 38.462 0.00 0.00 0.00 3.10
2412 2492 5.420739 GGGTGCAAATGTAAAATAAGGGAGA 59.579 40.000 0.00 0.00 0.00 3.71
2413 2493 5.422012 AGGGTGCAAATGTAAAATAAGGGAG 59.578 40.000 0.00 0.00 0.00 4.30
2417 2497 6.279513 TGGAGGGTGCAAATGTAAAATAAG 57.720 37.500 0.00 0.00 0.00 1.73
2421 2920 4.415596 AGATGGAGGGTGCAAATGTAAAA 58.584 39.130 0.00 0.00 0.00 1.52
2425 2924 1.341383 GGAGATGGAGGGTGCAAATGT 60.341 52.381 0.00 0.00 0.00 2.71
2441 2940 1.484653 CGTACATCAATGGTGGGGAGA 59.515 52.381 0.00 0.00 0.00 3.71
2481 2981 1.062258 GTTGCGAACGTCCGACAATA 58.938 50.000 0.00 0.00 32.00 1.90
2576 3078 3.450115 GGAGGTCGTCGACAGGGG 61.450 72.222 25.64 0.00 33.68 4.79
2663 3167 3.797256 CGCCATCCTTCGTACTCTAAAAG 59.203 47.826 0.00 0.00 0.00 2.27
2869 3378 1.068541 TGCATAGCGTACCAGCGATAG 60.069 52.381 0.00 0.00 43.00 2.08
2957 3466 5.049680 GGAAGCAAAACTTACGATCTTGTCA 60.050 40.000 0.00 0.00 39.29 3.58
3003 3515 4.093408 AGACCAACATCGATTGAACGAATG 59.907 41.667 0.00 0.00 45.16 2.67
3013 3525 6.582636 ACATAATGTGTAGACCAACATCGAT 58.417 36.000 0.00 0.00 39.91 3.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.