>input_sequence_61417
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------------------------------------------------------------GAATACGCGACGCGACCAGA
AGAGCTCCGCTAGCTCGTCCCAATGGCGGCGACGGGCGGCTCGGACGAGGAGGTGCACTTCGACTTCTTCCCGCTCGTCC
GCCAGTACAAGAGCGGCCGCGTGGAGCGCTTCTTCAACTTCCCCCCGATCCCGGCCGGCGTCGACCCCGCCACGGGCGTC
GTCTCCAGGGACGTCGTCATCGACCCGGCCAACGGCCTCTGGGCGCGCGTCTTCCTCCCGCCCGGCGCCGCCGGCAAGCT
CCCCGTCCTCGTCTACTTCCACGGCGGCGCCTACGTCATCGGCTCCGCGTCCGACCCCATGACGCACAACTACCTCAACG
GCCTCGTCGCCGCGGCCAACGTCCTCGCGGTGGCGCTCGAGTACCGCCTCGCGCCGGAGCACCCGCTCCCCGCGGCATAC
GACGACTCCTGGGAGGGGCTCAAGTGGGTGGCCTCCCACGCCACGGGCGGCGG------------CGCAGCAGAGCCGTG
GCTGCTCGACCACGGCGACTTCTCCCGCGTGTTCCTGGCGGGCGGCAGCGCCGGGGGCACCATCGCGCACGTCATGGCCG
TGCGCGCCGGCGAGCGGGGCGCCCTCCC---CG---GCGGGGTCGGCATCAAGGGGGTCATCGTGGTGCACCCCTACTTC
AGCGGCGCGGCGGAGATCGGCAAGGAGGCGACCACGGGGAAGGCGGAGAAGGCCAAGGCCGACGCCTTCTGGCGGTTCCT
CTACCCGGGCTCGCCGGGGCTGGACGACCCGCTGTCCAACCCGTTCTCGGAGGCGGCCGGCGGCAGCGCGGCGCGCATCG
CCGGCGACCGCGTGCTCGTCTGCGTCGCCGAGAAGGACGGCCTCCGGGACAGGGGCGTCTGGTACTACGAGAACCTCAAG
GCGAGCGGCTACGGCGGCGAGGTGGAGCTGCTCGAGTCCATGGACGAGGACCACGTCTTCTACTGCATGAAGCCGCGGTG
TGAGAAAGCGATCGAGTTGCAGGACCGCATCCTCAGCTTCCTCCGCAAGTGAGCCGC---CGCGCTCGCC----------
GGC-----AAAGGAAAGGGAAGTTCCCGTGATGGAAT----GAATAATTTTATCGCCA----------------------
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>chr7D_1_TraesCS7D01G173500
ACGCCCACGGCGAGGAAAGCACCGAAATTGTAGGTCGGTGTTGGCGTGTGAATCGAATCGAACGATGGAGCAGCGGAGGC
GTCGGCAACCAAAGCATCACCGGGACTGGGGAAGAAGGCTCCCCTCCGGTCCGGTGGATTGCTTTGGAGGCGTCTACAAA
AGGTACGATTTTTTCTTCTTTTCTTCTTGTGAGAATAGAGTAGAATTGAATTGAAGAAGAGTCGCGATTGAGTCGCCGGC
AACCTGCAGTAGCCAGGATCCGCGGAGATGGAGCTGGCGCGCGACGTGGGACCCTGGGAGGGAGGGTCTCGCTGAGAGAG
ATGAAACAAAGAAAGAAAGAAAGAAAATTGGGTGGGTCGGGTCCCACCGGTCGCTCCAGTTTGTTTCGTTGGATCGAATC
GGAGTAAAAAAAATGGAAAACGACGACATGTGCTGCGGAGCGCGCACTTCAATCACGTGCATGCTGAGAGCCTCCTCTAG
CTCCAAGTAGTACTCTACTCCGTTGGTCTCGGGGCCAGGAGGAGCTACGCTGAAAAAGGGATAATACTAGACTCACGGGC
TCCTTCAACGGACCTTTACGGAGTGGCCTACGTCTACGTGCCATCTCCTAATTTGCCCCCCCGATTTTCACTCTGGGGCC
TGCGAACCTTAATTAAATCCTGGCAACTAATACTTAATCAACCCGGTAAACTCCCCGTGGACCCCCCGTGAGTGTAGCAT
TGCCCCTGAAAAAGACCCCCCCTCTTGATGCCCGCAATGATCGGCACCGACCGCGCGTTTGGATTGGTGGGCATCTCCAC
TCTCGCCATTCGCCAACACTGCTCTGCTCTGCCGCGCACCAAACCATCAAAAAGTGGCC-GTACCGCCATTTTTGCCACC
ACA--------CCAACCGTTCGGTCCACCAATATCTGTCATCCACC-----------ACTCCATTACATAGTGCCGGCGA
TCGAGACTCGGGAGCAAAGCCTCGAAGCGACGGCACGAGCGAGCTAGCCCACGAACGATCGAATACGCGACGCGACCAGA
AGAGCTCCGCTAGCTCGTCCCAATGGCGGCGACGGGCGGCTCGGACGAGGAGGTGCACTTCGACTTCTTCCCGCTCGTCC
GCCAGTACAAGAGCGGCCGCGTGGAGCGCTTCTTCAACTTCCCCCCGATCCCGGCCGGCGTCGACCCCGCCACGGGCGTC
GTCTCCAGGGACGTCGTCATCGACCCGGCCAACGGCCTCTGGGCGCGCGTCTTCCTCCCGCCCGGCGCCGCCGGCAAGCT
CCCCGTCCTCGTCTACTTCCACGGCGGCGCCTACGTCATCGGCTCCGCGTCCGACCCCATGACGCACAACTACCTCAACG
GCCTCGTCGCCGCGGCCAACGTCCTCGCGGTGGCGCTCGAGTACCGCCTCGCGCCGGAGCACCCGCTCCCCGCGGCATAC
GACGACTCCTGGGAGGGGCTCAAGTGGGTGGCCTCCCACGCCACGGGCGGCGG------------CGCAGCAGAGCCGTG
GCTGCTCGACCACGGCGACTTCTCCCGCGTGTTCCTGGCGGGCGGCAGCGCCGGGGGCACCATCGCGCACGTCATGGCCG
TGCGCGCCGGCGAGCGGGGCGCCCTCCC---CG---GCGGGGTCGGCATCAAGGGGGTCATCGTGGTGCACCCCTACTTC
AGCGGCGCGGCGGAGATCGGCAAGGAGGCGACCACGGGGAAGGCGGAGAAGGCCAAGGCCGACGCCTTCTGGCGGTTCCT
CTACCCGGGCTCGCCGGGGCTGGACGACCCGCTGTCCAACCCGTTCTCGGAGGCGGCCGGCGGCAGCGCGGCGCGCATCG
CCGGCGACCGCGTGCTCGTCTGCGTCGCCGAGAAGGACGGCCTCCGGGACAGGGGCGTCTGGTACTACGAGAACCTCAAG
GCGAGCGGCTACGGCGGCGAGGTGGAGCTGCTCGAGTCCATGGACGAGGACCACGTCTTCTACTGCATGAAGCCGCGGTG
TGAGAAAGCGATCGAGTTGCAGGACCGCATCCTCAGCTTCCTCCGCAAGTGAGCCGC---CGCGCTCGCC----------
GGC-----AAAGGAAAGGGAAGTTCCCGTGATGGAAT----GAATAATTTTATCGCCATTGATGTTCCTCTGTTTGAGCT
CGAGAGATCTCTCCCTTTAATTTG--TTGTCCGTCGGTTATGGTCTCGCCGATGCAGCCGGCTGATGTTTATCTCAA---
TACCATGGCGAAGAGAGC--TAGTGGGTTTCTTCACAATTTGCGCTGAACTT-TTGTTTCAATCATCTTTCCTGTAGAGG
CCGAAAGTAATAAAGGTCTTTCCTTTTTTAATTATA---TTTATCTTGTGAAAAGTTATGGAT--------ATGTTTTGA
GGAGAAACCCCTATTTGCATTGTAAGGGCATCTCCAACGCCCACCCTCAAACCGCCCCGCATACGTCCGGACCGCGAAAG
TCATCAACTTCTCTCCC---------------------------------------------------------------
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------------------------------------TTATTTTACATTTGCACCCTCCATCTCC-CCACCATTGATGTAC
GTCTCCGCCCGCTACAGAGGTATTGTC-GGACGTTCGCAACCAGCACCGACGGGCCCGCTCGCCTTTACGATGGTTCTAT
CCACCCTGGAGCCGTT-GTACCCAGGTACACTCCGCCCCC-CTGTCGACGACCTCCA-TGGTGGACACCACGCCCGGCAG
GCGTTCAGTCAAATGCCATTGAGCTTATTTTCAAACACTATGTCGTC-TTTTAGAGTACGAAGGATGGCGAGCTACTCAA
CCATGGAGGATGAGTAGTTGTGTGATGCGTGGTTGGTCGTATCCGCGAATTTCGTAGGCAGGAGCAGAG-GGGGGACCTT
CTAGCAGCAAGTGCATGAATAATTT---CACGCACGAAAGCACATTCCGCCCTACGACATGTACGTCATTCAAGAACGCA
AACGTGAGGTCGTTGTCCTATCGCTGGTACGCTATGCAGACCAGCGTCACCAAGTTTTGTAACATGGTTCGTCAGCTGGA
GGCAAGGTGGCTATTGCACGCGACAT--GACAAGATCGTAAGTTTTGC-TTCCTTTTGCTCAACTTGTTTAAATCATTCG
TTCAATCGATGTTGGTCTACA-CATTAT--GTAGCCTGCACGCGCTGCC-TAATGTACCACATGACAGAGGGA
>chr7D_726
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-----CTGAAAAAGATCCCCCCTCTTGATGCCCACAATGATCGGCACCGACCGCTTGTA-----TGG-GGGCATCTCCAC
TCTCGCCA-------ACACTGCTCTGCTCTGCCGCGCACCAAACCATCAAAAAGT-GCC-GTATCGCCATTTTTGCCACC
TCA--------CCTACCGTTCGCTCCACCAATATCTGGCATCCACCGTTCTTCCACCACTCCACTACATACTGCCGGCGA
TCGAGACCCGAGAGCGAAGCCTCGAAGCGACGGCACGAGCGAGCTAGCCCACGAACGACCGAATACGCGACGCGACCAGA
AGAGCTCAGCTAGCTCGTCCCAATGGCGGCGACGGGCGGCTCGGACGAGGAGGTGTACTTCGACTTCTTCCCGCTCGTCC
GCCAGTACAAGAGCGGCCGCGTGGAGCGCTTCTTCAACTTCCCCCCGATCCCGGCCGGCGTCGACCCCGCCACGGGCGTC
ACCTCCAAGGACGTCGTCATCGACCCGGCCAACGGCCTCTGGGCGCGCGTCTTCCTCCCGCCCGGCGCCGCCGGCAGGCT
CCCCGTCCTCGTCTACTTCCACGGCGGCGCCTACGTCATCGGCTCCGCGTCCGACCCCATGACGCACAACTACCTCAACG
GCCTCGTCGCCGCGGCCAACGTCCTCGCGGTGGCGCTAGAGTACCGCCTCGCGCCGGAGCACCCGCTCCCCGCGGCCTAC
GACGACTCCTGGGAGGGGCTCAAGTGGGTGGCGTCCCACGCCGCGGGCGGCGG---------AGCCGCCGCCGAGCCGTG
GCTGGTCGACCACGGCGACTTCTCCCGCGTGTTCCTGGCGGGCGGCAGCGCCGGGGGCACCATCGCGCACGTCATGGCCG
TGCGCGCCGGCGAGCAGGGCGCCCTCCC---CGGCGG---GGTCGGCATCAAGGGGACCATCGTGGTGCACCCCTACTTC
AGCGGCGCGGCGGAGATCGGCAAAGAGGCGACCACGGGGAAGGCGGAGAAGGCCAAGGCCGACGCCTTCTGGCGGTTCCT
CTACCCGGGCTCGCCGGGGCTGGACGACCCGCTGTCCAACCCGTTCTCCGAGGCGGCCGGCGGCAGCGCGGCGCGCATCG
CCGGCGACCGCGTGCTCGTCTGCGTCGCCGAGAAGGACGGCCTCCGGGACAGGGGCGTCTGGTACTACGAGAGCCTCAAG
GCGTGCGGCTACGGCGGCGAGGTGGAGCTGCTCGAGTCCATGGACGAGGACCACGTCTTCTACTGCATGAAGCCGCGGTC
CGAGAAAGCGATCGAGTTGCAGGACCGCATCCTCGGATTCCTCCGCAAATGAGCCGCTTCCGCGCACGCC----------
GGCGAGTGAAGGGAAGGGAAGGTTCCCGTGATGGAAT----GAATAATTTTACCGCCACTGATTTTCCTATGTTTGAGCT
TGAGAGATCTCCCTTT---ATTTG--TTGTTCCTCGGTTATGGTCTCGCCGATGCAGCCGACCGATGTTTATCTCAA---
TACCATGGCGAAGAGAGC--TAGTGGGTTTCTTGACAATTTGTGCTCAACTTGTTGTTTCAATCATCTTTCCTGT-----
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>chr7B_751
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------------------------------CCCACAATGATCGGCACCGACCGCGCGTA-----TGGTGGGCATCTCCAC
TCTCGCCA-------ACACTGCTCTGCTCTGCCGCGCACCAAACCATCAAAAAGT-GCCCGTATCGCCATTTTTGCCACC
ACACCTACCGTCCTACCGTTCGCTCCACCAATATCTGGCATCCACCATTCCTCCACCACTCCATTACATAATGCCGGCGA
TCGAGACCCGAGAGCGAAGCCTCGAAGCGACGGCACGAGTGAGGTAGCCCACGAACGATCGAATACGCGACCAGAAG---
-------AGCTAGCTCGTCCCAATGGCGGCAACGGGCGGCTCGGACGAGGAGGTGCACTTCGACTTCTTCCCGCTCGTCC
GCCAGTACAAGAGCGGCCGCGTGGAGCGGTTCTTTAACTTCCCCCCGATCCCGGCCGGCGTCGACCCCGCCACGGGCGTC
GTCTCCAAGGACGTCGTCATCGACCCGGCCAACGGCCTCTGGGCGCGCGTCTTCCTGCCGCCCGGCGCCGCCGGCAAGCT
CCCCGTCCTCATCTACTTCCACGGCGGCGCCTACGTCATCGGCTCGGCGTCCGACCCCATGACGCACAACTACCTCAACG
GCCTCGTCGCCGCGGCCAACGTCGTCGCGGTGGCGCTCGAGTACCGCCTCGCGCCGGAGCACCCGCTCCCCGCGGCCTAC
GACGACTCCTGGGAGGGGCTCAAGTGGGTGGCGTCCCACGCCACGGCGGGCGC---------GGCCGGCACCGAGCCGTG
GCTGGTCGACCACGGCGACTTCTCCCGCGTGTTCCTGGCGGGCGGCAGCGCCGGGGGCACCATCGCGCACGTCATGGCCG
TGCGCGCCGGCGAGCAGGGCGCCCTCCC---CG---G---GGTCGGCATCAAGGGGATCATCGTGGTGCACCCGTACTTC
AGCGGCGCGGCGGAGATCGGCAAGGAGGCGACCACGGGGAAGGCGGAGAAGGCCAAGGCCGACGCCTTCTGGCGCTTCCT
CTACCCGGGCTCGCCGGGGCTGGACGACCCGCTGTCCAACCCGTTCTCGGAGGCGGCCGGCGGCAGCGCGGCGCGCATCG
CCGGCGAGCGCGTGCTCGTCTGCGTCGCCCAGAAGGACGGCCTCCGGGACAGGGGCGTCTGGTACTACGAGAGCCTCAAG
GCGAGCGGGTACGGCGGCGAGGTGGAGCTGCTCGAGTCCATGGACGAGGACCACGTCTTCTACTGCATGAAGCCGCGGTC
CGAGAAAGCGATCGAGTTGCAGGAGCGCATCCTCAGCTTCCTCCGCAAGTGAGCGGC---CGCGCGCACCGGCTGGTGAA
GGC-----AAGGGAAGGGAAGATTCCCTTGATGGAATAAT-------TTTTACCGCCACTGATTTTCCGATGTTTGAGCT
TGAGAGATCTCCCTTC---AATTTGTTTGTTCCTCGGTTATGTCCTCGCCGATGCAGTCGACTGATGTTTATGTCCTCGA
TAAATTGGCGAAGAGAGC--TAGTGGGTTTCTTGACAATCCGTGCTGAAATTGTTGTTCCAATCATCTTTCCTGTAGAGG
CCGAAAGCAATAAAGCTCTTTCA-TTTTTTGTTCTA---TTTGTCTTGTGAAAAGTGATGGATCATGTTT----------
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>chr7A_824
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-----------------------CTGCTCTGCCGCGCACCGAACCATAAAAAAGT-GCCCGTACCGCCATTTTTGCCACC
TCA--------CCTACCGTTCGCTCCACCAATATCTGGCATCCACCGTTCCTCCACCACTCCATTACATAGTGCCGGCGA
TCGAGATTCCAGAGCCAACCCCCGGAGCGACGTCACGAGCAAGCCC--------ACGGACGAATACGCGACGCCACCAGA
AGAGCTCAGCTAGCTCGTCCCAATGGCGGCGACGGGCGGCTCGGACGACGAGGTGCACTTCGACTTCTTCCCGCTCGTCC
GCCAGTACAAGAGCGGCCGCGTGGAGCGGTTCTTTAACTTCCCCCCCATCCCGGCCGGCGTCGACCCCGCCACGGGCGTC
GTCTCCAAGGACGTCGTCATCGACCCGGCCAACGGCCTCTGGGCGCGCGTCTTCCTGCCGCCCGGCGCCGCCGGCAAGCT
CCCCGTCGTCGTCTACTTCCACGGCGGCGCCTACGTCATCGGCTCGGCGTCCGACCCCATGACGCACAACTACCTCAACG
GCCTCGTCGCCGCGGCCAACGTCCTCGCGGTGGCGCTCGAGTACCGCCTCGCGCCGGAGCACCCGCTCCCCGCGGCCTAC
GACGACTCCTGGGAGGGGCTCAAGTGGGTGGCGTCCCACGCCACGGCTGGCGCGGGCGCGGCAGACGGCGCAGAGCCGTT
GCTGGTCGACCACGGCGACTTCTCCCGCGTGTTCCTGGCGGGCGGCAGCGCCGGGGGCACCATCGCGCACGTCATGGCCG
TGCGCGCCGGCGAGCAGGGTGCCCTCCCAGGCG---G---GGTCGGCATCAAGGGGACTATCGTGGTGCACCCCTACTTC
AGCGGCGCGGCGGAGATCGGCAAGGAGGCGACCACGGGGAAGGCGGAGAAGGCCAAGGCCGACGCCTTCTGGCGGTTCCT
CTACCCGGGCTCGCCGGGGCTCGACGACCCGCTGTCCAACCCGTTCTCCGAGGCGGCCGGCGGCAGCGCGGCGCGCATCG
CCGGCGACCGCGTGCTCGTCTGCGTCGCCGAGAAGGACGGCCTCCGGGACAGGGGCGTCTGGTACTACGAGAGCCTCAAG
GCGAGCGGCTACGGCGGCGAGGTGGAGCTGCTCGAGTCCATGGACGAGGACCACGTCTTCTACTGCATGAAGCCGCGGTC
CGAGAAAGCGATCGAGTTGCAGGAGCGCATCCTCAGCTTCCTCCGCAAGTGAGCGGC---CGCGCGCGCC----------
TGC-----AAAGGAAGT-AAGTTTCCCGTGAATCCGTGATGGAATAATCTTATCGCCATTGATGTTCCTCTGTTTGAGCT
TGAGAGATCCCCCTTT---ATTTC--TTGTTCCTCGGTTATGGTCTCGCCGATGCAGCCGACCGATGTTTATCTCCTCAG
TACCATGGCGAAGAAAGCTATAGTGGGTTTCTTGACAATTTGTGCTCAACTTGTTGTTTCAATCATCTTTCCTCT-GAGG
CCGAAAGCAATAAAGGTCTTTCA-TTTTTTTAATTCTATTTTATCTTGTGAAAAGTTATGGATCATGTTTGATGTTTTGA
GGAGAAACCGTTATTAGGCTTGTAAGGGCATCTTCAACACCGACCCCAAACCGTT--CGCGTATGTCTCGACTGCAGAAG
CCATCCAACACGGTCCTGTATCGGTCCAGGGCAAGGTCCGGACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGGACCCCGACATCCCAGGACTACC
CGATCCCATTTCCTTCCACAACGTCCCTTCTCCTCCTTACTTTGCACCCGCACCGTCCACCTCCGCCGCCGCCGTTGTAC
CTCTCCACCCGCCACAAAGGCATTGTC-GCACGTTCGCAACCAGCACCGACGCGCCCGCTCGCCTTTACGATGGCGCTGT
CCACCCTGGAGCCATTTGTACC-AGGTACACTCCGCC-CC-CTGTCGACGACGTCCA-TGGCGGATACCACGCCCGACAG
GTGTTCGATCAAACGCCATTGAGCTTATTTTCAAATGCTATGTTGTTTTTTGAGAGTACGAAGGATGGTGAGCTACTCAA
CCATGGAGGATGAGTAGTTGTGCGATGCGTGGTTGGCCGTATCCGTGAATTTCGTAGGCAGGAGCAGAT-GGGGGACCTT
CTGGCAGCAAGTGCATGAATAATTT---CACCAACGAAAGCACATTGTGCACTAAGACATGTACATCATTCAAGAACGCA
A-CATGAGGTAGTTATCGTATCGCTGGTACGCAATGCAGACCAGCGTCACCAAGTTTGGTAACGTGGTTCGTCAACTGG-
GGCAAGGTGGCTATTGCACGTGGCAA--GACAAGATCGTACGTTTTGC-TTCTTCTTGCTCAACTTGTTTAAATTATTCA
TTCACTCAATGTTGGTCTACAACATTAT--GTAGCCTGCACGCGCTGCC-TAATGTATCAGAGGACAGAGGGA
>chr2D_2409
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--------------------------CTTCTCCCCCATACTTTGCATCTGCACCCTCCACCTTTGCCGCCGCCGCTGTAC
GTCTCCGGCCGCCACAGAGGCATTGCT-GGACGTCCACAACCAGCACCAATGCGCACGTTTGCCTTTACGATAGCGTTGT
CCACCCTGGAGCCGTTTGTACCTAGGTACACTCCGCCTCC-CTGTCGACGACCTCCA-TGGCGGACACCACGCTCGACAG
GCGTTCTGTCAAATGTCATTTAGCTCATATTCAGT-ACTATGTCG-TTTTTTAGAGTATGAAGGATGACAAGCTACTCGA
CCATGGAGGATGAGTTGTTGTGCGTTGTGTGGTTGGCCGTATCCGCGGATTTCGTAGGCATGAGCAGAG-GGGGACCTTC
-TGACAGCAAGTGCATGAATCGCTT---TACACACGAAAGCACATTATGCCCTACGACATGTACATCATTTAAGAACGCA
A-TGTGAGGTTGTTATCGTATCACTGGTACGCTATCGAAACCAGCGTCACCAAGTTTTGTAACATGGTTCGTCAACTTGA
GGCAAGGTGGCCATTGCACGCGGCAGAGGACGAGATCGTAAGTTTTGC-TTCGTCTTGCTCAACTTGTTGATTG-GTTCG
TTCACTCAATGTTGGTCTACA-CATTAT--GTAGCCCGCACGTGTTGTAGTGATGTACCACGGGACAGAGGGA
>chr5D_2409
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--------------------------CTTCTCCCCCTTGCTTTGTATTCGCACCCTCCACCTCCGCCGCCGCTGCAGTTC
ATCTCCGGCCGCCACAAAGGCATTGTC-GGACGTCCGCAACCAGCACCGACGCGCCCGCTCGCAGTTTCGACGGAGCTTT
CAGCCCTGGAGCCGTTTGTACCCATGTACACTCCGTC-CC-CTGTCGACGACCTCCA-TGGCGGACACCACGCCCGACAG
GTGTTCGGTCAAATGCCATTGAGCTTATTTTCAAATGTTATATTG-TTTTTTAGAGTACGATGGATGGTGAGCTACTCGA
CCATGGAGGATGAGTTATTGTGCGATGCGTGGCTGGCCGTATCCGCGGATTTCATAGGCAGGAGCGGAG-GGGAGCCCTT
-TAGGAGCAAGTGCGTGGACAGTTT---AATGCACGAAAGCACATTGTGCCCTACGACATGTACATCATTCAACCACGCA
A-TGTGAGGTCGTTGACGTATCGTTGGCACGCTATCTAGATCAGCTTCACCAAATTTTGCAACGTGGTTCGTCAGCTCGA
GGAAAGGTGGCCATTGCACGCGACAGAGGACGAGATCGTAAGTTTTAC-TTCCTCTTGCTCAACTTGTTGATTG-ATTCA
TTCACTCAATGTTGGTCTACA-CATTATATGTAGTACGCACGCGCTGTCGTGGTGTACCA-------------
>chr1A_2409
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--------------------------CTTCACCCCCTTACTTTGCATCCGCACTCTCTACCTCCATCGCCGTTGTTGTTC
ATCTCCAGCCGCTACAGAGGCATTGTCAGAACGTTCGCAACCAGCACCGCCGCGCCCGGTCGCCGTTTCGATGGAGCTTT
CCACCCTGGAGTCGTTTGTACCCAGGTACACTCCGCC-CC-CTGTCGATGACCTCCAATGCCGGACACCACGCCTAACAG
GTGTTCGATCAAATGCCATTGAGCTTATTTTCAAACGCTTTGTCG--TTTTTAGAGTACGAAGGATGGTGAGCTACTCGA
CCATAAAGGATGAGTTCTTGTGTGATGCGGGGCTGGTCGTATCCACGGATTTCATATGCAGGAGCAGAG-GGGAGCCCTC
CTGGGAGCAAGTGCATGAAAAGTTT---CACGCACGAAAGCACATTGCGTCCTACGACATGTACATAATTCAACCACGCA
A-CGTGAGGTCATTGCGATATCGCTGACACGCTATCCAGATCAGCGTCATCAAGGTTTGCAACTTGGTTAGTCAGCTCGA
GGCAAGGTGGCCATTGCATGCGGACATGAAAGAGATGGTAAGTTTTAC-TTCCTCTTGCTCAAATATTTGATTG-ATTCA
TCCACTCAACGTTGGTCTACA-CATTATATGTAGCCCGCACACGCTGCCGTGATGCACCACAGGACAGAGGGA
>chr3D_2409
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--------------------------CTTCTTCCCCTTACTTTGCATCCGCACCCTCCACCTTCGCCGCCGCAGCTGTTC
TTCTCCGACCGCCACAGAGGCATTGCC-AGACGTCCACAACCAGCACCGACGCGCCCGCTCGCCATTCCGACGGAGTTTT
CCACCCTGGAGCCGTTTGTATCCAGGTACACTCCGCC-CC-CTGTCGGCGACCTCCA-TGGCGGACACCACGCCCGACGG
GTATTTGGTCAAATGCCATTGAGCTTATTTTTAAATGTTATGTCA-TTTTTTAGAGTACGAAGGATGGTGAGCTACTCGA
CCATGGAGGATGAGTTGTTGTGCTATGCGTGGCTGGCCGTATCCGCAGATTTCATAGGCAGGAGCAGAG-GGGAGCCCTT
CCGGGAGCAAGTGCATGAAAAGTTC---CATGCACGAAAGTACATTGCGCCCTACGACATGTACATCATTCAACCACGCA
A-CGTGAGGTCGTTGTCGTATCGCTGGCACGCTATCCAGGTCAGCGTCATCAAGTTTTGCAACTTGATTAGTCAGTTCGA
GGCAAGGTGGCCATTGCACGCGAACATG---AAGATGATAAGTTTTGC-TTCCTTTTGCTCAACTTGTTGATTG-ATTTA
TTCACTCAATGTTGGTCTATA-CATTATATGTAGCTCACACGCGCCACCGTGGTGTACCATAGGACAGAGAGA
>chr1D_2409
CTTCT---------------------------------------------------------------------------
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--------------------------------CCCCTTGCTTTGCATCCGCACCCTCCACCTCCGTCGCCGCCGCTGTTC
GTCTCAGGCCGCCACAGAGGCATTGCC-GGACGTCCGCAACCAGCACCGACACGCCCGCTCGTCGTTCCGACGGAGCTTT
CCACCCTGGAGCCGATTGTACCCAAGTACACTCCGCC-CC-CTATCGACGACCTTCA-TGGCAGACACCACGCCCGGCAG
GTGTTCGGTCAAATGCCATTGAGCTTATTTTCAAATGCTCTGTC--TTTTTTAGAGTACGAAGGATGGTGAGCTACTCGA
CCATGG-GGATGAGTTGTTCTGCGATGCGTGGCTGGTCGTATCCGCGGATTTCATAGGCAGGAGCAGAG-GGGAACCCTT
CTGGGAGCAAGTGGATGAAAATTTT---CACGCACGAAAGCACATTGGATCCTACTACATGCACATCATTCAACCACGCA
A-CATCAGGTCGTTGTCGTATCGCTGGCGCGCTATTCAGGTCAGCGTCATCAAGTTTTGCAACTTGCGTAGTCAGCTTGA
GGCAAGGTGGCTATTGCACGCGGACATGAAGGAGATGATAAGTTTTAC-TTCCCCTTGCTCAAGTTGTTGATTG-ACTCA
TTCATTCAATGTTGGTCTACA-TATTAAATGTAGCTCGCACGCGCCGCCTTGGTGTACCACATGACTGAGGGA
>chr7D_2410
-TTCT---------------------------------------------------------------------------
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--------------------------------CCCCTTGCTTTGCATCCGCACTCTCCACCTCAGCCACCGCCGATGTAT
GTCTTCGGCCGCCACAAAG-CATTACC-GAACGTCCGCAACCAGCACTGACGCGCCCGCTCGCCTCTATGACGGCGTTGT
CCACCCTGGAGCCGTTTGTACCTAGGGACACTCCGCT-CCCTTGTAGACGACCTCCA-TGGCGGAT--CACGCTCGCCAG
G-GTTCGGTCAAATGCCTTTGACCTTATTTTCGAACGCTATGTCG-TTTTTTAGAGTACGAAGCATGGCGAGCTACTCGA
CCATGGATGATGAGTTGTTGTGCGATGCGTGGTTGGGCGTATCCATGAATTTCGTAGGCAGGAGCAA--AGGGGGACCTT
CTAGCAGCAAGTGCATGAATTGTTT---CACGCATGAAAGTATATTGCGCCCTAAAACATGTACATCATTCAACAATGCA
A-TGTGAGGTCGTCATCGTATCACCGATACGCTATCCAGACCAGCGTCACCAAGCTTTGTAACGTGGTTCGTCAGCTGGA
GACAAGGTGGCTATTGCACGCGACAAAGGACGAGATCGTAAATTTTGC-TTCCTCTTGCTCAACTTGTTGATTG-ATTCG
TTCACTCAATGTTGGTCTACA-CATTAT--GTAGTCCGCACGCGTTGCCGTGATGTATCACAGGACAGAGAGA
>chr5D_2413
----T---------------------------------------------------------------------------
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--------------------------------CTCCTTACTTTGCATTCGCACCCTCCACCTTCGTCGCCGTTGTTGTAC
GTCTCCGGCCGCCACAGAGGCATTTCC-GGACGTCCGCAACCAGCACCGACGCGTCCGCTCGCCTCTA-GACGGCGTTGT
CCACCCTGGAGCCGTTTGTATCCAGGTACAATCCGCC-CCTCTGTCGACGGCTTCCA-TGGCGTAGACCATGCTCGGCTG
GTGTTCGATCAAATGCCATTGAGCTTATTTTCGAATGCTATGTCG-TTTTTTAGAGTACGAAGGATGGTGAGCTACTCGA
CCATGGAGGATAAGTTGCTAGGTGATGCGTGGTTGGCTGTATCCACGAATTTCGTAGGCAGAAGCAGAGAGGGGGACCTT
CTAGCAGCAAGTGCATGAATCGTCT---CACGCACGAAAGCACATTCGAACCTACGACATGTACATCATTGAAGAACACA
A-TGTGCGGTCGTTACCGTATTGCTGATATGCTATCCTGACCAGCGTCAACAAGTTTTGTAACGTGATTCGTCAGCTGGA
GGTAATGTGGCCATTGCATGCGGCAGAGGACGAGATCGTAAGTTTTTTTTTCTTCTTGCTCAACTTGTTGATTG-ATTCG
TTCACACAATGTTGGTCTACA-CATTAT--GTAGCCCGCGCGCGCTGCCGTGATGCACCACAAGACTGAG---
>chr7B_2432
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-------------------------------------------------GCACCCTCCACCTCCGCCGTTGTTGATGTAC
GTCTCCGTCCGCCACATAGGCATTGCG-GGATGTCCGCAACCAGCAGTGACGTGCCCGCTCGTCTCTACGACGGCGCTGT
CCACCCTGGAGCCGTTTGTACCCAGGTACACTCTGCC-CC-CTGTAGATGACCTTCA-TGGCGGACACCACGCTCGGCAT
GTGTTTAGTCAAATGTCATTGAACTTATTTTCGGACGCTATGTCG--TTTTTAGACTACGAAGGATGGAGAGCTACTCGA
CCATGGAGGATGAGTTGTTGTGCGATGCGTAGTTGGCCGTATCTACGGATTTCATAGGCAGGAG------GGGGGACCTT
CTGGCATCAAGTGCATGAATCATTTCAGCACGCACGAAAGCACATTGCGCCCTACGACATGTAC-TCATTCAACAATGTA
G-CGTGAGTTCGTTATCGTACCGCTGGTATGCTATCCAGACCAGTGTCATCAAGTTTTGTAACATGGTTCGTCAGCTGGA
GGCAATGTGACAATTGCACGCCACAGAAGATGAGATCGTAAGTTTTGC-TTTCTCTTGCTCAACTTGTTGATTG-ATTCG
TTCACTCAATGTTGGTGCACA-CATTAT--GTAGCCCGCACGCGCTGC--TGATGTACCACATCACATCGGGA
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS----------S-----------------S------------------------SSSSSS----------------
--------SSSSSSS----------------------------------------S------------------------
-------------S--------S--------------S------------------------------------------
----------S----S----------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------S-----------------------------------S-----------
----S---------------------------------------------------------------------------
---------------S---------------------SSS----------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------------------------------------------------------------------------------S
S----------------------------------------------------------------S--------------
---------------S--S-S-----------------------------------------------------------
S----------S-SS-SSS-----------S-S---------------------------S-------------------
---------------------------------S--------S-------------------------------------
-------S--------------SS-----SS--S----------------------------------------------
---------SS----S-SS--------------S----S--S----SS--S-SSSSS---S--S---SS---S--SS---
S----S-SSS-SS---S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------S---S---------------S----------S---------
--------------------S-------------------------------S---------------------SS--S-
-------------------------------------S-----------------------S------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-S---------------S--------------------------------------------------------------
-------------------------S------------------------------------------------S-----
----S--S-----------------------------------------------------------------
>forward_641
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-------------------------------------------------------------CGATTTTCACTCTGGGGCC
T-------------------------------------------------------------------------------
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>reverse_2469
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--------------------------------------------------------------------GGACCGCGAAAG
TCATCAAC------------------------------------------------------------------------
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-------------------------------------------------------------------------
