Multiple sequence alignment - TraesCS7D01G095100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G095100 chr7D 100.000 3988 0 0 1 3988 57098842 57102829 0.000000e+00 7365.0
1 TraesCS7D01G095100 chr7D 89.631 434 37 2 3560 3985 619672420 619672853 2.710000e-151 545.0
2 TraesCS7D01G095100 chr7D 91.419 303 20 2 3560 3862 101177503 101177207 1.030000e-110 411.0
3 TraesCS7D01G095100 chr7D 98.039 153 3 0 3388 3540 57718989 57718837 2.360000e-67 267.0
4 TraesCS7D01G095100 chr7A 94.017 2858 81 20 667 3498 61864690 61867483 0.000000e+00 4248.0
5 TraesCS7D01G095100 chr7A 96.697 1968 45 6 1581 3540 62067434 62065479 0.000000e+00 3256.0
6 TraesCS7D01G095100 chr7A 91.661 1451 65 21 54 1488 62068842 62067432 0.000000e+00 1958.0
7 TraesCS7D01G095100 chr7A 90.068 584 46 6 93 674 61834632 61835205 0.000000e+00 747.0
8 TraesCS7D01G095100 chr7A 81.250 320 40 12 67 379 480415600 480415906 1.430000e-59 241.0
9 TraesCS7D01G095100 chr7A 100.000 51 0 0 3490 3540 61874875 61874925 1.180000e-15 95.3
10 TraesCS7D01G095100 chr4A 90.988 577 49 2 306 880 673917819 673917244 0.000000e+00 774.0
11 TraesCS7D01G095100 chr4A 88.660 291 21 4 1 290 673923508 673923229 1.060000e-90 344.0
12 TraesCS7D01G095100 chr4A 81.250 320 40 10 67 379 635522918 635523224 1.430000e-59 241.0
13 TraesCS7D01G095100 chr6D 92.906 437 22 3 3560 3988 402558531 402558096 9.410000e-176 627.0
14 TraesCS7D01G095100 chr3D 92.644 435 24 3 3562 3988 444298698 444298264 1.570000e-173 619.0
15 TraesCS7D01G095100 chr3D 83.766 154 17 8 1443 1594 309913969 309913822 5.370000e-29 139.0
16 TraesCS7D01G095100 chr5D 91.435 432 32 3 3559 3988 9102501 9102073 4.440000e-164 588.0
17 TraesCS7D01G095100 chr5D 96.970 99 3 0 1487 1585 202429531 202429433 2.470000e-37 167.0
18 TraesCS7D01G095100 chr1D 90.575 435 23 6 3560 3988 477258801 477258379 9.680000e-156 560.0
19 TraesCS7D01G095100 chr1D 92.711 343 16 2 3560 3893 453534402 453534060 1.670000e-133 486.0
20 TraesCS7D01G095100 chr4D 89.327 431 31 6 3560 3988 424115828 424116245 9.820000e-146 527.0
21 TraesCS7D01G095100 chr4D 88.330 437 37 4 3560 3988 424175329 424175759 2.750000e-141 512.0
22 TraesCS7D01G095100 chr4D 96.078 102 4 0 1487 1588 323929669 323929568 2.470000e-37 167.0
23 TraesCS7D01G095100 chr2D 92.225 373 23 1 3560 3926 644088060 644087688 1.270000e-144 523.0
24 TraesCS7D01G095100 chr2D 92.715 151 9 1 3840 3988 543303312 543303462 2.410000e-52 217.0
25 TraesCS7D01G095100 chr3A 83.125 320 34 11 67 379 718581817 718582123 1.410000e-69 274.0
26 TraesCS7D01G095100 chr6A 83.387 313 33 11 67 373 94579011 94579310 5.080000e-69 272.0
27 TraesCS7D01G095100 chr5A 82.965 317 34 12 70 379 564672136 564671833 6.570000e-68 268.0
28 TraesCS7D01G095100 chrUn 82.650 317 35 11 70 379 231022739 231022436 3.060000e-66 263.0
29 TraesCS7D01G095100 chr2A 97.938 97 2 0 1487 1583 587158357 587158261 6.850000e-38 169.0
30 TraesCS7D01G095100 chr1A 96.117 103 3 1 1487 1589 264217588 264217487 2.470000e-37 167.0
31 TraesCS7D01G095100 chr5B 92.920 113 6 1 1480 1590 474772784 474772896 3.190000e-36 163.0
32 TraesCS7D01G095100 chr5B 96.000 100 4 0 1486 1585 681819315 681819414 3.190000e-36 163.0
33 TraesCS7D01G095100 chr3B 92.035 113 7 2 1484 1596 439865146 439865036 1.480000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G095100 chr7D 57098842 57102829 3987 False 7365 7365 100.000 1 3988 1 chr7D.!!$F1 3987
1 TraesCS7D01G095100 chr7A 61864690 61867483 2793 False 4248 4248 94.017 667 3498 1 chr7A.!!$F2 2831
2 TraesCS7D01G095100 chr7A 62065479 62068842 3363 True 2607 3256 94.179 54 3540 2 chr7A.!!$R1 3486
3 TraesCS7D01G095100 chr7A 61834632 61835205 573 False 747 747 90.068 93 674 1 chr7A.!!$F1 581
4 TraesCS7D01G095100 chr4A 673917244 673917819 575 True 774 774 90.988 306 880 1 chr4A.!!$R1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
50 51 0.101219 CATCTCACCATGTCGCTCGA 59.899 55.0 0.00 0.00 0.00 4.04 F
51 52 0.101399 ATCTCACCATGTCGCTCGAC 59.899 55.0 14.77 14.77 44.77 4.20 F
544 559 0.178990 GAGTCCTTGGGGTTTGCTGT 60.179 55.0 0.00 0.00 0.00 4.40 F
1850 1988 0.174845 CCTGGCAATGCTTGTGATGG 59.825 55.0 4.82 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1030 1065 2.328099 GCAGGCCAAAGACGACCAG 61.328 63.158 5.01 0.0 0.00 4.00 R
1331 1366 3.520721 GGGGGCTGTAGTTTAGTTAGGAA 59.479 47.826 0.00 0.0 0.00 3.36 R
2390 2530 1.187974 CCTCAATTGGCATTGGAGCA 58.812 50.000 5.42 0.0 40.41 4.26 R
3020 3160 0.170561 CTCAACAGCAAGCCATCAGC 59.829 55.000 0.00 0.0 44.25 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.888741 CTCGCTCGCGCTCGCTAA 62.889 66.667 5.56 0.00 39.59 3.09
33 34 2.956964 GCTCGCGCTCGCTAACAT 60.957 61.111 5.56 0.00 39.32 2.71
34 35 2.922070 GCTCGCGCTCGCTAACATC 61.922 63.158 5.56 0.00 39.32 3.06
35 36 1.298713 CTCGCGCTCGCTAACATCT 60.299 57.895 5.56 0.00 39.32 2.90
36 37 1.265462 CTCGCGCTCGCTAACATCTC 61.265 60.000 5.56 0.00 39.32 2.75
37 38 1.586303 CGCGCTCGCTAACATCTCA 60.586 57.895 5.56 0.00 39.32 3.27
38 39 1.802300 CGCGCTCGCTAACATCTCAC 61.802 60.000 5.56 0.00 39.32 3.51
39 40 1.483424 GCGCTCGCTAACATCTCACC 61.483 60.000 0.00 0.00 38.26 4.02
40 41 0.179137 CGCTCGCTAACATCTCACCA 60.179 55.000 0.00 0.00 0.00 4.17
41 42 1.536922 CGCTCGCTAACATCTCACCAT 60.537 52.381 0.00 0.00 0.00 3.55
42 43 1.863454 GCTCGCTAACATCTCACCATG 59.137 52.381 0.00 0.00 0.00 3.66
43 44 2.739932 GCTCGCTAACATCTCACCATGT 60.740 50.000 0.00 0.00 38.74 3.21
44 45 3.119291 CTCGCTAACATCTCACCATGTC 58.881 50.000 0.00 0.00 35.87 3.06
45 46 1.854743 CGCTAACATCTCACCATGTCG 59.145 52.381 0.00 0.00 35.87 4.35
46 47 1.594862 GCTAACATCTCACCATGTCGC 59.405 52.381 0.00 0.00 35.87 5.19
47 48 2.739932 GCTAACATCTCACCATGTCGCT 60.740 50.000 0.00 0.00 35.87 4.93
48 49 2.015736 AACATCTCACCATGTCGCTC 57.984 50.000 0.00 0.00 35.87 5.03
49 50 0.179127 ACATCTCACCATGTCGCTCG 60.179 55.000 0.00 0.00 30.76 5.03
50 51 0.101219 CATCTCACCATGTCGCTCGA 59.899 55.000 0.00 0.00 0.00 4.04
51 52 0.101399 ATCTCACCATGTCGCTCGAC 59.899 55.000 14.77 14.77 44.77 4.20
162 163 3.883744 CTTCGCTCACCACCCGCTT 62.884 63.158 0.00 0.00 0.00 4.68
202 203 3.399046 TGGGTAAGCGCACCATCT 58.601 55.556 17.73 0.00 40.65 2.90
203 204 1.220749 TGGGTAAGCGCACCATCTC 59.779 57.895 17.73 2.15 40.65 2.75
204 205 1.264749 TGGGTAAGCGCACCATCTCT 61.265 55.000 17.73 0.00 40.65 3.10
205 206 0.530870 GGGTAAGCGCACCATCTCTC 60.531 60.000 17.73 0.00 40.65 3.20
207 208 0.461961 GTAAGCGCACCATCTCTCCT 59.538 55.000 11.47 0.00 0.00 3.69
208 209 1.681793 GTAAGCGCACCATCTCTCCTA 59.318 52.381 11.47 0.00 0.00 2.94
209 210 0.461961 AAGCGCACCATCTCTCCTAC 59.538 55.000 11.47 0.00 0.00 3.18
210 211 1.068250 GCGCACCATCTCTCCTACC 59.932 63.158 0.30 0.00 0.00 3.18
211 212 1.742768 CGCACCATCTCTCCTACCC 59.257 63.158 0.00 0.00 0.00 3.69
212 213 1.749334 CGCACCATCTCTCCTACCCC 61.749 65.000 0.00 0.00 0.00 4.95
213 214 0.399233 GCACCATCTCTCCTACCCCT 60.399 60.000 0.00 0.00 0.00 4.79
214 215 1.710816 CACCATCTCTCCTACCCCTC 58.289 60.000 0.00 0.00 0.00 4.30
215 216 1.219213 CACCATCTCTCCTACCCCTCT 59.781 57.143 0.00 0.00 0.00 3.69
216 217 1.501604 ACCATCTCTCCTACCCCTCTC 59.498 57.143 0.00 0.00 0.00 3.20
217 218 1.546773 CCATCTCTCCTACCCCTCTCG 60.547 61.905 0.00 0.00 0.00 4.04
224 236 1.717038 CCTACCCCTCTCGCCTCCTA 61.717 65.000 0.00 0.00 0.00 2.94
280 292 2.593725 CGGCTGGCTGATGGATGG 60.594 66.667 0.00 0.00 0.00 3.51
281 293 2.599597 GGCTGGCTGATGGATGGT 59.400 61.111 0.00 0.00 0.00 3.55
324 336 3.788937 TGGATTTCGGTTCGGTTAGATC 58.211 45.455 0.00 0.00 0.00 2.75
326 338 4.141801 TGGATTTCGGTTCGGTTAGATCAT 60.142 41.667 0.00 0.00 0.00 2.45
329 341 4.730949 TTCGGTTCGGTTAGATCATTCT 57.269 40.909 0.00 0.00 35.90 2.40
336 348 6.146347 GGTTCGGTTAGATCATTCTATGCTTC 59.854 42.308 0.00 0.00 34.44 3.86
338 350 5.009710 TCGGTTAGATCATTCTATGCTTCGT 59.990 40.000 0.00 0.00 34.44 3.85
339 351 6.206048 TCGGTTAGATCATTCTATGCTTCGTA 59.794 38.462 0.00 0.00 34.44 3.43
340 352 6.524933 CGGTTAGATCATTCTATGCTTCGTAG 59.475 42.308 0.00 0.00 34.44 3.51
389 404 5.104259 GGATATGGTCCTGTAATGATCCC 57.896 47.826 0.00 0.00 44.16 3.85
415 430 0.592754 GTCTGTCTCGCTGTATCGGC 60.593 60.000 0.00 0.00 0.00 5.54
481 496 3.386237 AGGCCTCCGTGCTGTCTC 61.386 66.667 0.00 0.00 0.00 3.36
482 497 4.459089 GGCCTCCGTGCTGTCTCC 62.459 72.222 0.00 0.00 0.00 3.71
544 559 0.178990 GAGTCCTTGGGGTTTGCTGT 60.179 55.000 0.00 0.00 0.00 4.40
561 576 2.203337 TCCTGCTGTTGTGTGCCC 60.203 61.111 0.00 0.00 0.00 5.36
563 578 2.558286 CCTGCTGTTGTGTGCCCTG 61.558 63.158 0.00 0.00 0.00 4.45
584 599 5.411831 TGTATGTCTGCTCAGTCTGAATT 57.588 39.130 3.67 0.00 0.00 2.17
665 680 3.358707 TGACTGCATTTTGCTGAACTG 57.641 42.857 12.46 0.00 45.31 3.16
705 721 1.002366 CATTGTCTACCAGCAGCGAC 58.998 55.000 0.00 0.00 0.00 5.19
764 782 2.287487 TGTGGACAATGCGTTGATTGTG 60.287 45.455 25.13 0.00 44.78 3.33
777 795 1.177401 GATTGTGGAGGCCTTTGGTC 58.823 55.000 6.77 0.00 0.00 4.02
787 809 2.049435 CCTTTGGTCCCCAGTTTGC 58.951 57.895 0.00 0.00 33.81 3.68
808 830 2.095461 GGACAATTTCTGCTTCCTCCC 58.905 52.381 0.00 0.00 0.00 4.30
1030 1065 2.956964 CGAGGAAGATGGCGACGC 60.957 66.667 12.43 12.43 0.00 5.19
1287 1322 0.388520 CATCTCGCTGTGACCAACGA 60.389 55.000 0.00 0.00 36.88 3.85
1288 1323 3.848142 CTCGCTGTGACCAACGAG 58.152 61.111 4.96 4.96 46.91 4.18
1289 1324 1.007271 CTCGCTGTGACCAACGAGT 60.007 57.895 9.82 0.00 46.86 4.18
1331 1366 2.639839 ACACCCAGTATGAGCTCACTTT 59.360 45.455 20.97 5.98 39.69 2.66
1404 1439 5.896106 AGTCAGTCATGATCTGAGTAATCCA 59.104 40.000 23.09 5.14 41.82 3.41
1485 1520 6.054941 TGTATACACTTGGCAGGATAACATG 58.945 40.000 2.65 0.00 0.00 3.21
1486 1521 3.439857 ACACTTGGCAGGATAACATGT 57.560 42.857 2.65 0.00 0.00 3.21
1487 1522 4.568072 ACACTTGGCAGGATAACATGTA 57.432 40.909 2.65 0.00 0.00 2.29
1488 1523 4.261801 ACACTTGGCAGGATAACATGTAC 58.738 43.478 2.65 0.00 0.00 2.90
1489 1524 4.019321 ACACTTGGCAGGATAACATGTACT 60.019 41.667 2.65 0.00 0.00 2.73
1490 1525 4.572389 CACTTGGCAGGATAACATGTACTC 59.428 45.833 2.65 0.00 0.00 2.59
1491 1526 3.838244 TGGCAGGATAACATGTACTCC 57.162 47.619 15.60 15.60 0.00 3.85
1492 1527 2.438021 TGGCAGGATAACATGTACTCCC 59.562 50.000 18.43 9.73 0.00 4.30
1493 1528 2.706190 GGCAGGATAACATGTACTCCCT 59.294 50.000 18.43 11.49 0.00 4.20
1494 1529 3.244249 GGCAGGATAACATGTACTCCCTC 60.244 52.174 18.43 12.28 0.00 4.30
1495 1530 3.244249 GCAGGATAACATGTACTCCCTCC 60.244 52.174 18.43 10.19 0.00 4.30
1496 1531 3.967326 CAGGATAACATGTACTCCCTCCA 59.033 47.826 18.43 0.00 0.00 3.86
1497 1532 4.594920 CAGGATAACATGTACTCCCTCCAT 59.405 45.833 18.43 2.49 0.00 3.41
1498 1533 4.841246 AGGATAACATGTACTCCCTCCATC 59.159 45.833 18.43 3.97 0.00 3.51
1499 1534 4.020128 GGATAACATGTACTCCCTCCATCC 60.020 50.000 13.32 5.45 0.00 3.51
1500 1535 1.807814 ACATGTACTCCCTCCATCCC 58.192 55.000 0.00 0.00 0.00 3.85
1501 1536 1.009552 ACATGTACTCCCTCCATCCCA 59.990 52.381 0.00 0.00 0.00 4.37
1502 1537 2.126882 CATGTACTCCCTCCATCCCAA 58.873 52.381 0.00 0.00 0.00 4.12
1503 1538 2.352561 TGTACTCCCTCCATCCCAAA 57.647 50.000 0.00 0.00 0.00 3.28
1504 1539 2.638325 TGTACTCCCTCCATCCCAAAA 58.362 47.619 0.00 0.00 0.00 2.44
1505 1540 3.197983 TGTACTCCCTCCATCCCAAAAT 58.802 45.455 0.00 0.00 0.00 1.82
1506 1541 4.376223 TGTACTCCCTCCATCCCAAAATA 58.624 43.478 0.00 0.00 0.00 1.40
1507 1542 4.791334 TGTACTCCCTCCATCCCAAAATAA 59.209 41.667 0.00 0.00 0.00 1.40
1508 1543 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
1509 1544 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
1510 1545 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
1511 1546 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
1512 1547 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
1513 1548 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
1514 1549 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
1515 1550 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
1516 1551 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
1517 1552 5.710099 TCCATCCCAAAATAAGTGTCTCAAC 59.290 40.000 0.00 0.00 0.00 3.18
1518 1553 5.711976 CCATCCCAAAATAAGTGTCTCAACT 59.288 40.000 0.00 0.00 0.00 3.16
1519 1554 6.209391 CCATCCCAAAATAAGTGTCTCAACTT 59.791 38.462 0.00 0.00 42.89 2.66
1520 1555 7.255942 CCATCCCAAAATAAGTGTCTCAACTTT 60.256 37.037 0.00 0.00 40.77 2.66
1521 1556 8.792633 CATCCCAAAATAAGTGTCTCAACTTTA 58.207 33.333 0.00 0.00 40.77 1.85
1522 1557 8.934023 TCCCAAAATAAGTGTCTCAACTTTAT 57.066 30.769 0.00 0.00 40.77 1.40
1562 1597 8.788325 AAAGTTGTACTAAGTTTGAGACACTT 57.212 30.769 8.92 0.00 38.13 3.16
1563 1598 9.880157 AAAGTTGTACTAAGTTTGAGACACTTA 57.120 29.630 8.92 0.00 35.95 2.24
1570 1605 8.166422 ACTAAGTTTGAGACACTTATTTTGGG 57.834 34.615 0.00 0.00 36.39 4.12
1571 1606 7.996644 ACTAAGTTTGAGACACTTATTTTGGGA 59.003 33.333 0.00 0.00 36.39 4.37
1572 1607 7.839680 AAGTTTGAGACACTTATTTTGGGAT 57.160 32.000 0.00 0.00 32.48 3.85
1573 1608 7.219484 AGTTTGAGACACTTATTTTGGGATG 57.781 36.000 0.00 0.00 0.00 3.51
1574 1609 6.209391 AGTTTGAGACACTTATTTTGGGATGG 59.791 38.462 0.00 0.00 0.00 3.51
1575 1610 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
1576 1611 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
1577 1612 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
1578 1613 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
1579 1614 3.596046 ACACTTATTTTGGGATGGAGGGA 59.404 43.478 0.00 0.00 0.00 4.20
1712 1850 7.432148 TCCTCCTGTTTGATATTTACAGCTA 57.568 36.000 0.00 0.00 38.32 3.32
1735 1873 5.336102 ACCTGTGGATGGAAATTTCTGAAT 58.664 37.500 17.42 9.22 0.00 2.57
1841 1979 2.493278 AGTTGTACATTCCTGGCAATGC 59.507 45.455 14.68 0.00 37.28 3.56
1850 1988 0.174845 CCTGGCAATGCTTGTGATGG 59.825 55.000 4.82 0.00 0.00 3.51
1852 1990 1.153509 GGCAATGCTTGTGATGGGC 60.154 57.895 4.82 0.00 0.00 5.36
1943 2081 1.071699 AGTTCATACGGCGGCCATATT 59.928 47.619 20.71 2.13 0.00 1.28
2176 2314 6.149973 TGAACTGCTTTATCTCCACAATCAAG 59.850 38.462 0.00 0.00 0.00 3.02
2270 2410 2.099141 TTCTCGTCCCTTTGATGCTG 57.901 50.000 0.00 0.00 0.00 4.41
2354 2494 1.856265 GCACTCCAAAGGAAGTGGCG 61.856 60.000 13.59 0.00 35.99 5.69
2361 2501 2.616510 CCAAAGGAAGTGGCGAGAGAAT 60.617 50.000 0.00 0.00 0.00 2.40
2390 2530 0.322816 ATTGCCGTGAGCCTGTCAAT 60.323 50.000 0.00 0.00 42.71 2.57
2483 2623 1.077858 CAAGGAGGAGGCTGCCTTC 60.078 63.158 24.26 21.99 39.91 3.46
2564 2704 4.436986 GCGTCAATCTACTTAAACAAGGCC 60.437 45.833 0.00 0.00 0.00 5.19
2646 2786 2.037641 CAGATGACACCCAAGACAGACA 59.962 50.000 0.00 0.00 0.00 3.41
2801 2941 1.840635 GTGAGGCCTAGAGGAAACCAT 59.159 52.381 4.42 0.00 37.39 3.55
2824 2964 1.950973 GAAGACCAGGGACCGAGAGC 61.951 65.000 0.00 0.00 0.00 4.09
2846 2986 2.207501 CTGATGCAGGGGCTGGAACT 62.208 60.000 0.00 0.00 41.91 3.01
2865 3005 4.134379 ACTAGTGGCAGTGATTCATCTG 57.866 45.455 4.76 10.20 35.12 2.90
2885 3025 5.514169 TCTGATACAGACTCTGAAGATGGT 58.486 41.667 13.25 0.00 35.39 3.55
2972 3112 1.812686 CGAGGTTCGTTGGAGGTCCA 61.813 60.000 0.00 0.00 45.94 4.02
3025 3165 8.915057 AAGTATGCTACTTGAAATATGCTGAT 57.085 30.769 7.50 0.00 46.58 2.90
3026 3166 8.320396 AGTATGCTACTTGAAATATGCTGATG 57.680 34.615 0.00 0.00 34.86 3.07
3027 3167 6.570672 ATGCTACTTGAAATATGCTGATGG 57.429 37.500 0.00 0.00 0.00 3.51
3028 3168 4.276678 TGCTACTTGAAATATGCTGATGGC 59.723 41.667 0.00 0.00 42.22 4.40
3029 3169 4.518211 GCTACTTGAAATATGCTGATGGCT 59.482 41.667 0.00 0.00 42.39 4.75
3121 3261 1.134670 GCACTAGCTGTGGTTCTAGGG 60.135 57.143 15.16 0.00 46.27 3.53
3343 3485 1.136147 GCATGAACAGGCAAGAGCG 59.864 57.895 6.57 0.00 43.41 5.03
3449 3591 2.350772 GCCAGGTTGATCAAAACGTCAG 60.351 50.000 10.35 0.00 0.00 3.51
3540 3686 5.007039 CGCAACTATGATTAGCACACAGAAT 59.993 40.000 0.00 0.00 0.00 2.40
3541 3687 6.457392 CGCAACTATGATTAGCACACAGAATT 60.457 38.462 0.00 0.00 0.00 2.17
3542 3688 6.909357 GCAACTATGATTAGCACACAGAATTC 59.091 38.462 0.00 0.00 0.00 2.17
3543 3689 7.412853 CAACTATGATTAGCACACAGAATTCC 58.587 38.462 0.65 0.00 0.00 3.01
3544 3690 6.653020 ACTATGATTAGCACACAGAATTCCA 58.347 36.000 0.65 0.00 0.00 3.53
3545 3691 7.285566 ACTATGATTAGCACACAGAATTCCAT 58.714 34.615 0.65 0.00 0.00 3.41
3546 3692 6.630444 ATGATTAGCACACAGAATTCCATC 57.370 37.500 0.65 0.00 0.00 3.51
3547 3693 5.499313 TGATTAGCACACAGAATTCCATCA 58.501 37.500 0.65 0.00 0.00 3.07
3548 3694 5.587443 TGATTAGCACACAGAATTCCATCAG 59.413 40.000 0.65 0.00 0.00 2.90
3549 3695 2.089980 AGCACACAGAATTCCATCAGC 58.910 47.619 0.65 1.84 0.00 4.26
3550 3696 2.089980 GCACACAGAATTCCATCAGCT 58.910 47.619 0.65 0.00 0.00 4.24
3551 3697 2.159421 GCACACAGAATTCCATCAGCTG 60.159 50.000 7.63 7.63 0.00 4.24
3552 3698 3.340928 CACACAGAATTCCATCAGCTGA 58.659 45.455 20.79 20.79 0.00 4.26
3553 3699 3.374367 CACACAGAATTCCATCAGCTGAG 59.626 47.826 22.96 13.56 0.00 3.35
3554 3700 2.943690 CACAGAATTCCATCAGCTGAGG 59.056 50.000 22.96 22.09 0.00 3.86
3555 3701 2.842496 ACAGAATTCCATCAGCTGAGGA 59.158 45.455 28.98 25.59 0.00 3.71
3556 3702 3.458857 ACAGAATTCCATCAGCTGAGGAT 59.541 43.478 28.98 16.57 0.00 3.24
3557 3703 4.079901 ACAGAATTCCATCAGCTGAGGATT 60.080 41.667 28.98 20.40 0.00 3.01
3558 3704 4.888239 CAGAATTCCATCAGCTGAGGATTT 59.112 41.667 28.98 26.87 0.00 2.17
3559 3705 5.360144 CAGAATTCCATCAGCTGAGGATTTT 59.640 40.000 28.98 22.81 0.00 1.82
3560 3706 5.360144 AGAATTCCATCAGCTGAGGATTTTG 59.640 40.000 28.98 16.87 0.00 2.44
3561 3707 3.726557 TCCATCAGCTGAGGATTTTGT 57.273 42.857 28.98 2.86 0.00 2.83
3562 3708 4.038271 TCCATCAGCTGAGGATTTTGTT 57.962 40.909 28.98 2.05 0.00 2.83
3563 3709 5.178096 TCCATCAGCTGAGGATTTTGTTA 57.822 39.130 28.98 5.57 0.00 2.41
3564 3710 5.188434 TCCATCAGCTGAGGATTTTGTTAG 58.812 41.667 28.98 9.33 0.00 2.34
3565 3711 5.045651 TCCATCAGCTGAGGATTTTGTTAGA 60.046 40.000 28.98 11.52 0.00 2.10
3566 3712 5.296283 CCATCAGCTGAGGATTTTGTTAGAG 59.704 44.000 28.98 4.29 0.00 2.43
3567 3713 5.489792 TCAGCTGAGGATTTTGTTAGAGT 57.510 39.130 13.74 0.00 0.00 3.24
3568 3714 6.605471 TCAGCTGAGGATTTTGTTAGAGTA 57.395 37.500 13.74 0.00 0.00 2.59
3569 3715 6.398918 TCAGCTGAGGATTTTGTTAGAGTAC 58.601 40.000 13.74 0.00 0.00 2.73
3570 3716 6.014584 TCAGCTGAGGATTTTGTTAGAGTACA 60.015 38.462 13.74 0.00 0.00 2.90
3571 3717 6.650807 CAGCTGAGGATTTTGTTAGAGTACAA 59.349 38.462 8.42 0.00 36.30 2.41
3572 3718 6.651225 AGCTGAGGATTTTGTTAGAGTACAAC 59.349 38.462 0.00 0.00 37.72 3.32
3573 3719 6.651225 GCTGAGGATTTTGTTAGAGTACAACT 59.349 38.462 0.00 0.00 37.72 3.16
3574 3720 7.173390 GCTGAGGATTTTGTTAGAGTACAACTT 59.827 37.037 0.00 0.00 37.72 2.66
3575 3721 8.378172 TGAGGATTTTGTTAGAGTACAACTTG 57.622 34.615 0.00 0.00 37.72 3.16
3576 3722 7.990886 TGAGGATTTTGTTAGAGTACAACTTGT 59.009 33.333 0.00 0.00 37.72 3.16
3577 3723 9.485206 GAGGATTTTGTTAGAGTACAACTTGTA 57.515 33.333 0.00 0.00 37.72 2.41
3578 3724 9.841295 AGGATTTTGTTAGAGTACAACTTGTAA 57.159 29.630 3.10 0.00 37.72 2.41
3600 3746 9.064706 TGTAATAGGATTAAGACTTCTACTCGG 57.935 37.037 0.00 0.00 0.00 4.63
3601 3747 9.282569 GTAATAGGATTAAGACTTCTACTCGGA 57.717 37.037 0.00 0.00 0.00 4.55
3602 3748 8.943594 AATAGGATTAAGACTTCTACTCGGAT 57.056 34.615 0.00 0.00 0.00 4.18
3603 3749 8.943594 ATAGGATTAAGACTTCTACTCGGATT 57.056 34.615 0.00 0.00 0.00 3.01
3604 3750 7.045126 AGGATTAAGACTTCTACTCGGATTG 57.955 40.000 0.00 0.00 0.00 2.67
3605 3751 6.608002 AGGATTAAGACTTCTACTCGGATTGT 59.392 38.462 0.00 0.00 0.00 2.71
3606 3752 7.778853 AGGATTAAGACTTCTACTCGGATTGTA 59.221 37.037 0.00 0.00 0.00 2.41
3607 3753 8.411683 GGATTAAGACTTCTACTCGGATTGTAA 58.588 37.037 0.00 0.00 0.00 2.41
3608 3754 9.968870 GATTAAGACTTCTACTCGGATTGTAAT 57.031 33.333 0.00 0.00 0.00 1.89
3612 3758 7.942990 AGACTTCTACTCGGATTGTAATAAGG 58.057 38.462 0.00 0.00 0.00 2.69
3613 3759 6.514063 ACTTCTACTCGGATTGTAATAAGGC 58.486 40.000 0.00 0.00 0.00 4.35
3614 3760 6.324254 ACTTCTACTCGGATTGTAATAAGGCT 59.676 38.462 0.00 0.00 0.00 4.58
3615 3761 7.504911 ACTTCTACTCGGATTGTAATAAGGCTA 59.495 37.037 0.00 0.00 0.00 3.93
3616 3762 7.450124 TCTACTCGGATTGTAATAAGGCTAG 57.550 40.000 0.00 0.00 0.00 3.42
3617 3763 5.470047 ACTCGGATTGTAATAAGGCTAGG 57.530 43.478 0.00 0.00 0.00 3.02
3618 3764 4.900054 ACTCGGATTGTAATAAGGCTAGGT 59.100 41.667 0.00 0.00 0.00 3.08
3619 3765 5.010820 ACTCGGATTGTAATAAGGCTAGGTC 59.989 44.000 0.00 0.00 0.00 3.85
3620 3766 4.897076 TCGGATTGTAATAAGGCTAGGTCA 59.103 41.667 0.00 0.00 0.00 4.02
3621 3767 5.010719 TCGGATTGTAATAAGGCTAGGTCAG 59.989 44.000 0.00 0.00 0.00 3.51
3622 3768 5.010719 CGGATTGTAATAAGGCTAGGTCAGA 59.989 44.000 0.00 0.00 0.00 3.27
3623 3769 6.295349 CGGATTGTAATAAGGCTAGGTCAGAT 60.295 42.308 0.00 0.00 0.00 2.90
3624 3770 6.876257 GGATTGTAATAAGGCTAGGTCAGATG 59.124 42.308 0.00 0.00 0.00 2.90
3625 3771 6.808321 TTGTAATAAGGCTAGGTCAGATGT 57.192 37.500 0.00 0.00 0.00 3.06
3626 3772 7.907841 TTGTAATAAGGCTAGGTCAGATGTA 57.092 36.000 0.00 0.00 0.00 2.29
3627 3773 7.526142 TGTAATAAGGCTAGGTCAGATGTAG 57.474 40.000 0.00 0.00 0.00 2.74
3628 3774 5.476091 AATAAGGCTAGGTCAGATGTAGC 57.524 43.478 5.70 5.70 38.79 3.58
3629 3775 2.765689 AGGCTAGGTCAGATGTAGCT 57.234 50.000 11.81 0.00 39.36 3.32
3630 3776 3.039252 AGGCTAGGTCAGATGTAGCTT 57.961 47.619 11.81 4.13 39.36 3.74
3631 3777 2.697751 AGGCTAGGTCAGATGTAGCTTG 59.302 50.000 11.81 0.00 39.36 4.01
3632 3778 2.224161 GGCTAGGTCAGATGTAGCTTGG 60.224 54.545 11.81 0.00 39.36 3.61
3633 3779 2.804933 GCTAGGTCAGATGTAGCTTGGC 60.805 54.545 0.00 0.00 36.93 4.52
3634 3780 1.577736 AGGTCAGATGTAGCTTGGCT 58.422 50.000 0.00 0.00 43.41 4.75
3635 3781 1.484240 AGGTCAGATGTAGCTTGGCTC 59.516 52.381 0.00 0.00 40.44 4.70
3636 3782 1.484240 GGTCAGATGTAGCTTGGCTCT 59.516 52.381 0.00 0.00 40.44 4.09
3637 3783 2.093235 GGTCAGATGTAGCTTGGCTCTT 60.093 50.000 0.00 0.00 40.44 2.85
3638 3784 3.133003 GGTCAGATGTAGCTTGGCTCTTA 59.867 47.826 0.00 0.00 40.44 2.10
3639 3785 4.202305 GGTCAGATGTAGCTTGGCTCTTAT 60.202 45.833 0.00 0.00 40.44 1.73
3640 3786 5.011125 GGTCAGATGTAGCTTGGCTCTTATA 59.989 44.000 0.00 0.00 40.44 0.98
3641 3787 6.295575 GGTCAGATGTAGCTTGGCTCTTATAT 60.296 42.308 0.00 0.00 40.44 0.86
3642 3788 7.093727 GGTCAGATGTAGCTTGGCTCTTATATA 60.094 40.741 0.00 0.00 40.44 0.86
3643 3789 8.474025 GTCAGATGTAGCTTGGCTCTTATATAT 58.526 37.037 0.00 0.00 40.44 0.86
3644 3790 9.700831 TCAGATGTAGCTTGGCTCTTATATATA 57.299 33.333 0.00 0.00 40.44 0.86
3645 3791 9.743057 CAGATGTAGCTTGGCTCTTATATATAC 57.257 37.037 0.00 0.00 40.44 1.47
3646 3792 9.707957 AGATGTAGCTTGGCTCTTATATATACT 57.292 33.333 0.00 0.00 40.44 2.12
3649 3795 9.535170 TGTAGCTTGGCTCTTATATATACTTCT 57.465 33.333 0.00 0.00 40.44 2.85
3652 3798 8.875168 AGCTTGGCTCTTATATATACTTCTTGT 58.125 33.333 0.00 0.00 30.62 3.16
3656 3802 8.737175 TGGCTCTTATATATACTTCTTGTACCG 58.263 37.037 0.00 0.00 33.45 4.02
3657 3803 8.189460 GGCTCTTATATATACTTCTTGTACCGG 58.811 40.741 0.00 0.00 33.45 5.28
3658 3804 7.701501 GCTCTTATATATACTTCTTGTACCGGC 59.298 40.741 0.00 0.00 33.45 6.13
3659 3805 8.640063 TCTTATATATACTTCTTGTACCGGCA 57.360 34.615 0.00 0.00 33.45 5.69
3660 3806 9.251440 TCTTATATATACTTCTTGTACCGGCAT 57.749 33.333 0.00 0.00 33.45 4.40
3667 3813 6.861065 ACTTCTTGTACCGGCATAATATTG 57.139 37.500 0.00 0.00 0.00 1.90
3668 3814 6.354130 ACTTCTTGTACCGGCATAATATTGT 58.646 36.000 0.00 0.00 0.00 2.71
3669 3815 7.502696 ACTTCTTGTACCGGCATAATATTGTA 58.497 34.615 0.00 0.00 0.00 2.41
3670 3816 8.154856 ACTTCTTGTACCGGCATAATATTGTAT 58.845 33.333 0.00 0.00 0.00 2.29
3671 3817 8.542497 TTCTTGTACCGGCATAATATTGTATC 57.458 34.615 0.00 0.00 0.00 2.24
3672 3818 7.672240 TCTTGTACCGGCATAATATTGTATCA 58.328 34.615 0.00 0.00 0.00 2.15
3673 3819 8.151596 TCTTGTACCGGCATAATATTGTATCAA 58.848 33.333 0.00 0.00 0.00 2.57
3674 3820 7.661127 TGTACCGGCATAATATTGTATCAAC 57.339 36.000 0.00 0.00 0.00 3.18
3675 3821 7.217906 TGTACCGGCATAATATTGTATCAACA 58.782 34.615 0.00 0.00 0.00 3.33
3707 3853 9.764363 TCAATACAATTCTACATGGTATCAGAC 57.236 33.333 0.00 0.00 0.00 3.51
3708 3854 9.770097 CAATACAATTCTACATGGTATCAGACT 57.230 33.333 0.00 0.00 0.00 3.24
3712 3858 9.770097 ACAATTCTACATGGTATCAGACTTATG 57.230 33.333 0.00 0.00 0.00 1.90
3713 3859 9.987272 CAATTCTACATGGTATCAGACTTATGA 57.013 33.333 0.00 0.00 0.00 2.15
3716 3862 8.354711 TCTACATGGTATCAGACTTATGATCC 57.645 38.462 0.00 0.00 40.40 3.36
3717 3863 8.173412 TCTACATGGTATCAGACTTATGATCCT 58.827 37.037 0.00 0.00 40.40 3.24
3718 3864 9.467796 CTACATGGTATCAGACTTATGATCCTA 57.532 37.037 0.00 0.00 40.40 2.94
3719 3865 8.359875 ACATGGTATCAGACTTATGATCCTAG 57.640 38.462 0.00 0.00 40.40 3.02
3720 3866 7.398618 ACATGGTATCAGACTTATGATCCTAGG 59.601 40.741 0.82 0.82 40.40 3.02
3721 3867 6.256819 TGGTATCAGACTTATGATCCTAGGG 58.743 44.000 9.46 0.00 40.40 3.53
3722 3868 6.183361 TGGTATCAGACTTATGATCCTAGGGT 60.183 42.308 9.46 0.00 40.40 4.34
3723 3869 7.019254 TGGTATCAGACTTATGATCCTAGGGTA 59.981 40.741 9.46 0.00 40.40 3.69
3724 3870 8.062536 GGTATCAGACTTATGATCCTAGGGTAT 58.937 40.741 9.46 3.86 40.40 2.73
3725 3871 7.969690 ATCAGACTTATGATCCTAGGGTATG 57.030 40.000 9.46 4.70 34.84 2.39
3726 3872 6.256819 TCAGACTTATGATCCTAGGGTATGG 58.743 44.000 9.46 2.47 0.00 2.74
3727 3873 5.026790 AGACTTATGATCCTAGGGTATGGC 58.973 45.833 9.46 2.56 0.00 4.40
3728 3874 5.026790 GACTTATGATCCTAGGGTATGGCT 58.973 45.833 9.46 0.00 0.00 4.75
3729 3875 6.010650 AGACTTATGATCCTAGGGTATGGCTA 60.011 42.308 9.46 0.00 0.00 3.93
3730 3876 6.571624 ACTTATGATCCTAGGGTATGGCTAA 58.428 40.000 9.46 0.00 0.00 3.09
3731 3877 6.440965 ACTTATGATCCTAGGGTATGGCTAAC 59.559 42.308 9.46 0.00 0.00 2.34
3732 3878 3.517612 TGATCCTAGGGTATGGCTAACC 58.482 50.000 9.46 0.73 34.60 2.85
3736 3882 2.112507 GGGTATGGCTAACCCGCC 59.887 66.667 11.36 0.00 46.95 6.13
3776 3922 4.874977 GGCTACTCCGAGCGGCAC 62.875 72.222 1.45 0.00 43.83 5.01
3800 3946 4.814294 ATCGTCGCCGCCAAGGTC 62.814 66.667 0.00 0.00 43.70 3.85
3822 3968 2.279073 CGGCCTCCTCCACCTCTA 59.721 66.667 0.00 0.00 0.00 2.43
3823 3969 2.128507 CGGCCTCCTCCACCTCTAC 61.129 68.421 0.00 0.00 0.00 2.59
3824 3970 1.762858 GGCCTCCTCCACCTCTACC 60.763 68.421 0.00 0.00 0.00 3.18
3825 3971 1.311747 GCCTCCTCCACCTCTACCT 59.688 63.158 0.00 0.00 0.00 3.08
3826 3972 0.325765 GCCTCCTCCACCTCTACCTT 60.326 60.000 0.00 0.00 0.00 3.50
3827 3973 1.902141 GCCTCCTCCACCTCTACCTTT 60.902 57.143 0.00 0.00 0.00 3.11
3828 3974 2.626149 GCCTCCTCCACCTCTACCTTTA 60.626 54.545 0.00 0.00 0.00 1.85
3829 3975 3.032459 CCTCCTCCACCTCTACCTTTAC 58.968 54.545 0.00 0.00 0.00 2.01
3830 3976 3.309994 CCTCCTCCACCTCTACCTTTACT 60.310 52.174 0.00 0.00 0.00 2.24
3831 3977 3.955551 CTCCTCCACCTCTACCTTTACTC 59.044 52.174 0.00 0.00 0.00 2.59
3832 3978 3.596956 TCCTCCACCTCTACCTTTACTCT 59.403 47.826 0.00 0.00 0.00 3.24
3833 3979 4.792426 TCCTCCACCTCTACCTTTACTCTA 59.208 45.833 0.00 0.00 0.00 2.43
3834 3980 5.104024 TCCTCCACCTCTACCTTTACTCTAG 60.104 48.000 0.00 0.00 0.00 2.43
3835 3981 4.534797 TCCACCTCTACCTTTACTCTAGC 58.465 47.826 0.00 0.00 0.00 3.42
3836 3982 4.230041 TCCACCTCTACCTTTACTCTAGCT 59.770 45.833 0.00 0.00 0.00 3.32
3837 3983 4.581409 CCACCTCTACCTTTACTCTAGCTC 59.419 50.000 0.00 0.00 0.00 4.09
3838 3984 5.442391 CACCTCTACCTTTACTCTAGCTCT 58.558 45.833 0.00 0.00 0.00 4.09
3839 3985 6.409464 CCACCTCTACCTTTACTCTAGCTCTA 60.409 46.154 0.00 0.00 0.00 2.43
3840 3986 6.484308 CACCTCTACCTTTACTCTAGCTCTAC 59.516 46.154 0.00 0.00 0.00 2.59
3841 3987 5.999600 CCTCTACCTTTACTCTAGCTCTACC 59.000 48.000 0.00 0.00 0.00 3.18
3842 3988 6.183361 CCTCTACCTTTACTCTAGCTCTACCT 60.183 46.154 0.00 0.00 0.00 3.08
3843 3989 6.829849 TCTACCTTTACTCTAGCTCTACCTC 58.170 44.000 0.00 0.00 0.00 3.85
3844 3990 4.795469 ACCTTTACTCTAGCTCTACCTCC 58.205 47.826 0.00 0.00 0.00 4.30
3845 3991 4.230041 ACCTTTACTCTAGCTCTACCTCCA 59.770 45.833 0.00 0.00 0.00 3.86
3846 3992 4.581409 CCTTTACTCTAGCTCTACCTCCAC 59.419 50.000 0.00 0.00 0.00 4.02
3847 3993 2.740506 ACTCTAGCTCTACCTCCACC 57.259 55.000 0.00 0.00 0.00 4.61
3848 3994 1.923850 ACTCTAGCTCTACCTCCACCA 59.076 52.381 0.00 0.00 0.00 4.17
3849 3995 2.312140 ACTCTAGCTCTACCTCCACCAA 59.688 50.000 0.00 0.00 0.00 3.67
3850 3996 2.691011 CTCTAGCTCTACCTCCACCAAC 59.309 54.545 0.00 0.00 0.00 3.77
3851 3997 2.042569 TCTAGCTCTACCTCCACCAACA 59.957 50.000 0.00 0.00 0.00 3.33
3852 3998 1.270907 AGCTCTACCTCCACCAACAG 58.729 55.000 0.00 0.00 0.00 3.16
3853 3999 0.391793 GCTCTACCTCCACCAACAGC 60.392 60.000 0.00 0.00 0.00 4.40
3854 4000 0.976641 CTCTACCTCCACCAACAGCA 59.023 55.000 0.00 0.00 0.00 4.41
3855 4001 0.685097 TCTACCTCCACCAACAGCAC 59.315 55.000 0.00 0.00 0.00 4.40
3856 4002 0.321653 CTACCTCCACCAACAGCACC 60.322 60.000 0.00 0.00 0.00 5.01
3857 4003 0.766674 TACCTCCACCAACAGCACCT 60.767 55.000 0.00 0.00 0.00 4.00
3858 4004 1.302832 CCTCCACCAACAGCACCTC 60.303 63.158 0.00 0.00 0.00 3.85
3859 4005 1.302832 CTCCACCAACAGCACCTCC 60.303 63.158 0.00 0.00 0.00 4.30
3860 4006 1.770110 TCCACCAACAGCACCTCCT 60.770 57.895 0.00 0.00 0.00 3.69
3861 4007 1.302832 CCACCAACAGCACCTCCTC 60.303 63.158 0.00 0.00 0.00 3.71
3862 4008 1.451504 CACCAACAGCACCTCCTCA 59.548 57.895 0.00 0.00 0.00 3.86
3863 4009 0.179020 CACCAACAGCACCTCCTCAA 60.179 55.000 0.00 0.00 0.00 3.02
3864 4010 0.179018 ACCAACAGCACCTCCTCAAC 60.179 55.000 0.00 0.00 0.00 3.18
3865 4011 0.890996 CCAACAGCACCTCCTCAACC 60.891 60.000 0.00 0.00 0.00 3.77
3866 4012 0.179020 CAACAGCACCTCCTCAACCA 60.179 55.000 0.00 0.00 0.00 3.67
3867 4013 0.773644 AACAGCACCTCCTCAACCAT 59.226 50.000 0.00 0.00 0.00 3.55
3868 4014 0.326264 ACAGCACCTCCTCAACCATC 59.674 55.000 0.00 0.00 0.00 3.51
3869 4015 0.393537 CAGCACCTCCTCAACCATCC 60.394 60.000 0.00 0.00 0.00 3.51
3870 4016 1.450312 GCACCTCCTCAACCATCCG 60.450 63.158 0.00 0.00 0.00 4.18
3871 4017 1.221840 CACCTCCTCAACCATCCGG 59.778 63.158 0.00 0.00 38.77 5.14
3872 4018 2.190578 CCTCCTCAACCATCCGGC 59.809 66.667 0.00 0.00 34.57 6.13
3873 4019 2.370445 CCTCCTCAACCATCCGGCT 61.370 63.158 0.00 0.00 34.57 5.52
3874 4020 1.153289 CTCCTCAACCATCCGGCTG 60.153 63.158 0.00 0.00 34.57 4.85
3875 4021 2.124570 CCTCAACCATCCGGCTGG 60.125 66.667 22.80 22.80 42.35 4.85
3876 4022 2.825836 CTCAACCATCCGGCTGGC 60.826 66.667 24.24 0.00 40.15 4.85
3877 4023 4.776322 TCAACCATCCGGCTGGCG 62.776 66.667 24.24 17.39 40.15 5.69
3879 4025 4.778143 AACCATCCGGCTGGCGTC 62.778 66.667 24.24 0.00 40.15 5.19
3882 4028 4.776322 CATCCGGCTGGCGTCCAA 62.776 66.667 22.22 5.37 30.80 3.53
3883 4029 4.473520 ATCCGGCTGGCGTCCAAG 62.474 66.667 22.22 6.67 30.80 3.61
3887 4033 4.329545 GGCTGGCGTCCAAGTCCA 62.330 66.667 0.35 0.00 30.80 4.02
3888 4034 2.281484 GCTGGCGTCCAAGTCCAA 60.281 61.111 0.35 0.00 30.80 3.53
3889 4035 1.896660 GCTGGCGTCCAAGTCCAAA 60.897 57.895 0.35 0.00 30.80 3.28
3890 4036 1.949257 CTGGCGTCCAAGTCCAAAC 59.051 57.895 0.35 0.00 30.80 2.93
3891 4037 0.535102 CTGGCGTCCAAGTCCAAACT 60.535 55.000 0.35 0.00 37.32 2.66
3892 4038 0.759959 TGGCGTCCAAGTCCAAACTA 59.240 50.000 0.00 0.00 33.48 2.24
3893 4039 1.154197 GGCGTCCAAGTCCAAACTAC 58.846 55.000 0.00 0.00 33.48 2.73
3894 4040 1.154197 GCGTCCAAGTCCAAACTACC 58.846 55.000 0.00 0.00 33.48 3.18
3895 4041 1.425412 CGTCCAAGTCCAAACTACCG 58.575 55.000 0.00 0.00 33.48 4.02
3896 4042 1.804601 GTCCAAGTCCAAACTACCGG 58.195 55.000 0.00 0.00 33.48 5.28
3897 4043 0.688487 TCCAAGTCCAAACTACCGGG 59.312 55.000 6.32 0.00 33.48 5.73
3898 4044 0.322187 CCAAGTCCAAACTACCGGGG 60.322 60.000 6.32 0.00 33.48 5.73
3899 4045 0.958876 CAAGTCCAAACTACCGGGGC 60.959 60.000 6.32 0.00 33.48 5.80
3900 4046 1.420532 AAGTCCAAACTACCGGGGCA 61.421 55.000 6.32 0.00 33.48 5.36
3901 4047 1.073548 GTCCAAACTACCGGGGCAA 59.926 57.895 6.32 0.00 0.00 4.52
3902 4048 0.537828 GTCCAAACTACCGGGGCAAA 60.538 55.000 6.32 0.00 0.00 3.68
3903 4049 0.185416 TCCAAACTACCGGGGCAAAA 59.815 50.000 6.32 0.00 0.00 2.44
3904 4050 1.041437 CCAAACTACCGGGGCAAAAA 58.959 50.000 6.32 0.00 0.00 1.94
3905 4051 1.621317 CCAAACTACCGGGGCAAAAAT 59.379 47.619 6.32 0.00 0.00 1.82
3906 4052 2.353307 CCAAACTACCGGGGCAAAAATC 60.353 50.000 6.32 0.00 0.00 2.17
3907 4053 1.552578 AACTACCGGGGCAAAAATCC 58.447 50.000 6.32 0.00 0.00 3.01
3908 4054 0.702316 ACTACCGGGGCAAAAATCCT 59.298 50.000 6.32 0.00 0.00 3.24
3909 4055 1.917568 ACTACCGGGGCAAAAATCCTA 59.082 47.619 6.32 0.00 0.00 2.94
3910 4056 2.092592 ACTACCGGGGCAAAAATCCTAG 60.093 50.000 6.32 0.00 0.00 3.02
3911 4057 0.033503 ACCGGGGCAAAAATCCTAGG 60.034 55.000 6.32 0.82 0.00 3.02
3912 4058 1.391933 CCGGGGCAAAAATCCTAGGC 61.392 60.000 2.96 0.00 0.00 3.93
3913 4059 1.391933 CGGGGCAAAAATCCTAGGCC 61.392 60.000 2.96 0.00 45.15 5.19
3914 4060 1.391933 GGGGCAAAAATCCTAGGCCG 61.392 60.000 2.96 0.00 46.67 6.13
3915 4061 1.437573 GGCAAAAATCCTAGGCCGC 59.562 57.895 2.96 0.00 34.56 6.53
3916 4062 1.437573 GCAAAAATCCTAGGCCGCC 59.562 57.895 2.96 0.00 0.00 6.13
3917 4063 1.037579 GCAAAAATCCTAGGCCGCCT 61.038 55.000 18.05 18.05 37.71 5.52
3918 4064 1.474330 CAAAAATCCTAGGCCGCCTT 58.526 50.000 19.35 1.59 34.61 4.35
3919 4065 2.650322 CAAAAATCCTAGGCCGCCTTA 58.350 47.619 19.35 4.13 34.61 2.69
3920 4066 2.618709 CAAAAATCCTAGGCCGCCTTAG 59.381 50.000 19.35 12.41 34.61 2.18
3921 4067 1.508256 AAATCCTAGGCCGCCTTAGT 58.492 50.000 19.35 0.00 34.61 2.24
3922 4068 1.508256 AATCCTAGGCCGCCTTAGTT 58.492 50.000 19.35 5.27 34.61 2.24
3923 4069 1.049402 ATCCTAGGCCGCCTTAGTTC 58.951 55.000 19.35 0.00 34.61 3.01
3924 4070 1.047034 TCCTAGGCCGCCTTAGTTCC 61.047 60.000 19.35 0.00 34.61 3.62
3925 4071 1.067582 CTAGGCCGCCTTAGTTCCG 59.932 63.158 19.35 0.00 34.61 4.30
3926 4072 2.973180 CTAGGCCGCCTTAGTTCCGC 62.973 65.000 19.35 0.00 34.61 5.54
3927 4073 4.770874 GGCCGCCTTAGTTCCGCA 62.771 66.667 0.71 0.00 0.00 5.69
3928 4074 3.497031 GCCGCCTTAGTTCCGCAC 61.497 66.667 0.00 0.00 0.00 5.34
3929 4075 3.186047 CCGCCTTAGTTCCGCACG 61.186 66.667 0.00 0.00 0.00 5.34
3930 4076 2.126228 CGCCTTAGTTCCGCACGA 60.126 61.111 0.00 0.00 0.00 4.35
3931 4077 2.442188 CGCCTTAGTTCCGCACGAC 61.442 63.158 0.00 0.00 0.00 4.34
3932 4078 2.442188 GCCTTAGTTCCGCACGACG 61.442 63.158 0.00 0.00 43.15 5.12
3933 4079 2.442188 CCTTAGTTCCGCACGACGC 61.442 63.158 0.00 0.00 41.76 5.19
3934 4080 2.431260 TTAGTTCCGCACGACGCC 60.431 61.111 0.00 0.00 41.76 5.68
3935 4081 3.919973 TTAGTTCCGCACGACGCCC 62.920 63.158 0.00 0.00 41.76 6.13
3952 4098 4.277593 CGCTCCTGCTCCGCCTAG 62.278 72.222 0.00 0.00 36.97 3.02
3953 4099 4.600576 GCTCCTGCTCCGCCTAGC 62.601 72.222 0.00 0.00 43.08 3.42
3954 4100 2.837291 CTCCTGCTCCGCCTAGCT 60.837 66.667 6.51 0.00 43.19 3.32
3955 4101 2.835431 TCCTGCTCCGCCTAGCTC 60.835 66.667 6.51 0.00 43.19 4.09
3956 4102 3.922640 CCTGCTCCGCCTAGCTCC 61.923 72.222 6.51 0.00 43.19 4.70
3957 4103 3.150335 CTGCTCCGCCTAGCTCCA 61.150 66.667 6.51 0.00 43.19 3.86
3958 4104 3.438017 CTGCTCCGCCTAGCTCCAC 62.438 68.421 6.51 0.00 43.19 4.02
3959 4105 4.228567 GCTCCGCCTAGCTCCACC 62.229 72.222 0.00 0.00 39.50 4.61
3960 4106 2.759973 CTCCGCCTAGCTCCACCA 60.760 66.667 0.00 0.00 0.00 4.17
3961 4107 2.284331 TCCGCCTAGCTCCACCAA 60.284 61.111 0.00 0.00 0.00 3.67
3962 4108 2.125106 CCGCCTAGCTCCACCAAC 60.125 66.667 0.00 0.00 0.00 3.77
3963 4109 2.660064 CCGCCTAGCTCCACCAACT 61.660 63.158 0.00 0.00 0.00 3.16
3964 4110 1.448540 CGCCTAGCTCCACCAACTG 60.449 63.158 0.00 0.00 0.00 3.16
3965 4111 1.679898 GCCTAGCTCCACCAACTGT 59.320 57.895 0.00 0.00 0.00 3.55
3966 4112 0.674895 GCCTAGCTCCACCAACTGTG 60.675 60.000 0.00 0.00 45.01 3.66
3967 4113 0.674895 CCTAGCTCCACCAACTGTGC 60.675 60.000 0.00 0.00 44.01 4.57
3968 4114 0.674895 CTAGCTCCACCAACTGTGCC 60.675 60.000 0.00 0.00 44.01 5.01
3969 4115 1.414866 TAGCTCCACCAACTGTGCCA 61.415 55.000 0.00 0.00 44.01 4.92
3970 4116 2.555547 GCTCCACCAACTGTGCCAC 61.556 63.158 0.00 0.00 44.01 5.01
3971 4117 1.898574 CTCCACCAACTGTGCCACC 60.899 63.158 0.00 0.00 44.01 4.61
3972 4118 2.123939 CCACCAACTGTGCCACCA 60.124 61.111 0.00 0.00 44.01 4.17
3973 4119 2.489275 CCACCAACTGTGCCACCAC 61.489 63.158 0.00 0.00 44.01 4.16
3974 4120 2.123897 ACCAACTGTGCCACCACC 60.124 61.111 0.00 0.00 41.35 4.61
3975 4121 3.286751 CCAACTGTGCCACCACCG 61.287 66.667 0.00 0.00 41.35 4.94
3976 4122 3.964875 CAACTGTGCCACCACCGC 61.965 66.667 0.00 0.00 41.35 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.483424 GGTGAGATGTTAGCGAGCGC 61.483 60.000 6.78 6.78 42.33 5.92
21 22 0.179137 TGGTGAGATGTTAGCGAGCG 60.179 55.000 0.00 0.00 0.00 5.03
22 23 1.863454 CATGGTGAGATGTTAGCGAGC 59.137 52.381 0.00 0.00 0.00 5.03
23 24 3.119291 GACATGGTGAGATGTTAGCGAG 58.881 50.000 0.00 0.00 36.67 5.03
24 25 2.479560 CGACATGGTGAGATGTTAGCGA 60.480 50.000 0.00 0.00 36.67 4.93
25 26 1.854743 CGACATGGTGAGATGTTAGCG 59.145 52.381 0.00 0.00 36.67 4.26
26 27 1.594862 GCGACATGGTGAGATGTTAGC 59.405 52.381 0.00 0.00 36.67 3.09
27 28 3.119291 GAGCGACATGGTGAGATGTTAG 58.881 50.000 0.00 0.00 36.67 2.34
28 29 2.479560 CGAGCGACATGGTGAGATGTTA 60.480 50.000 0.00 0.00 36.67 2.41
29 30 1.737029 CGAGCGACATGGTGAGATGTT 60.737 52.381 0.00 0.00 36.67 2.71
30 31 0.179127 CGAGCGACATGGTGAGATGT 60.179 55.000 0.00 0.00 39.34 3.06
31 32 0.101219 TCGAGCGACATGGTGAGATG 59.899 55.000 0.00 0.00 0.00 2.90
32 33 0.101399 GTCGAGCGACATGGTGAGAT 59.899 55.000 17.21 0.00 44.02 2.75
33 34 1.506718 GTCGAGCGACATGGTGAGA 59.493 57.895 17.21 0.00 44.02 3.27
34 35 1.869574 CGTCGAGCGACATGGTGAG 60.870 63.158 21.09 1.29 44.77 3.51
35 36 2.178273 CGTCGAGCGACATGGTGA 59.822 61.111 21.09 0.00 44.77 4.02
36 37 3.545481 GCGTCGAGCGACATGGTG 61.545 66.667 21.09 7.08 44.77 4.17
202 203 1.997256 GAGGCGAGAGGGGTAGGAGA 61.997 65.000 0.00 0.00 0.00 3.71
203 204 1.529713 GAGGCGAGAGGGGTAGGAG 60.530 68.421 0.00 0.00 0.00 3.69
204 205 2.601868 GAGGCGAGAGGGGTAGGA 59.398 66.667 0.00 0.00 0.00 2.94
205 206 1.717038 TAGGAGGCGAGAGGGGTAGG 61.717 65.000 0.00 0.00 0.00 3.18
207 208 1.535685 GTAGGAGGCGAGAGGGGTA 59.464 63.158 0.00 0.00 0.00 3.69
208 209 2.279408 GTAGGAGGCGAGAGGGGT 59.721 66.667 0.00 0.00 0.00 4.95
209 210 2.522193 GGTAGGAGGCGAGAGGGG 60.522 72.222 0.00 0.00 0.00 4.79
210 211 1.529713 GAGGTAGGAGGCGAGAGGG 60.530 68.421 0.00 0.00 0.00 4.30
211 212 1.894756 CGAGGTAGGAGGCGAGAGG 60.895 68.421 0.00 0.00 0.00 3.69
212 213 1.894756 CCGAGGTAGGAGGCGAGAG 60.895 68.421 0.00 0.00 0.00 3.20
213 214 2.192443 CCGAGGTAGGAGGCGAGA 59.808 66.667 0.00 0.00 0.00 4.04
214 215 3.597728 GCCGAGGTAGGAGGCGAG 61.598 72.222 0.00 0.00 41.53 5.03
271 283 2.025416 ACCCAAAATCGACCATCCATCA 60.025 45.455 0.00 0.00 0.00 3.07
280 292 2.351060 GGAAAACGGACCCAAAATCGAC 60.351 50.000 0.00 0.00 0.00 4.20
281 293 1.881324 GGAAAACGGACCCAAAATCGA 59.119 47.619 0.00 0.00 0.00 3.59
336 348 7.893236 GCAATCGCTCATAAAATATGTACTACG 59.107 37.037 0.00 0.00 34.30 3.51
380 395 3.632333 ACAGACAGAGACGGGATCATTA 58.368 45.455 0.00 0.00 0.00 1.90
389 404 0.179202 CAGCGAGACAGACAGAGACG 60.179 60.000 0.00 0.00 0.00 4.18
415 430 2.281070 ACAAGAGGCAGGCACACG 60.281 61.111 0.00 0.00 0.00 4.49
422 437 1.605710 CAGAACAACCACAAGAGGCAG 59.394 52.381 0.00 0.00 0.00 4.85
544 559 2.203337 GGGCACACAACAGCAGGA 60.203 61.111 0.00 0.00 0.00 3.86
561 576 4.446994 TTCAGACTGAGCAGACATACAG 57.553 45.455 5.10 0.00 36.58 2.74
563 578 7.038659 ACTTAATTCAGACTGAGCAGACATAC 58.961 38.462 5.10 0.00 0.00 2.39
584 599 6.147164 CCAAACGAGCAGATGAACTTAACTTA 59.853 38.462 0.00 0.00 0.00 2.24
665 680 0.673644 CCTGGATGACCACACGTTCC 60.674 60.000 0.00 0.00 41.77 3.62
705 721 0.525311 TGCACACACACAGTTGTTGG 59.475 50.000 0.00 0.00 31.66 3.77
787 809 1.740025 GGAGGAAGCAGAAATTGTCCG 59.260 52.381 0.00 0.00 0.00 4.79
1030 1065 2.328099 GCAGGCCAAAGACGACCAG 61.328 63.158 5.01 0.00 0.00 4.00
1321 1356 7.871463 TGTAGTTTAGTTAGGAAAAGTGAGCTC 59.129 37.037 6.82 6.82 0.00 4.09
1331 1366 3.520721 GGGGGCTGTAGTTTAGTTAGGAA 59.479 47.826 0.00 0.00 0.00 3.36
1485 1520 3.953542 ATTTTGGGATGGAGGGAGTAC 57.046 47.619 0.00 0.00 0.00 2.73
1486 1521 5.043762 ACTTATTTTGGGATGGAGGGAGTA 58.956 41.667 0.00 0.00 0.00 2.59
1487 1522 3.858638 ACTTATTTTGGGATGGAGGGAGT 59.141 43.478 0.00 0.00 0.00 3.85
1488 1523 4.210331 CACTTATTTTGGGATGGAGGGAG 58.790 47.826 0.00 0.00 0.00 4.30
1489 1524 3.596046 ACACTTATTTTGGGATGGAGGGA 59.404 43.478 0.00 0.00 0.00 4.20
1490 1525 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
1491 1526 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
1492 1527 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
1493 1528 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
1494 1529 5.711976 AGTTGAGACACTTATTTTGGGATGG 59.288 40.000 0.00 0.00 0.00 3.51
1495 1530 6.824305 AGTTGAGACACTTATTTTGGGATG 57.176 37.500 0.00 0.00 0.00 3.51
1496 1531 7.839680 AAAGTTGAGACACTTATTTTGGGAT 57.160 32.000 0.00 0.00 35.87 3.85
1497 1532 8.934023 ATAAAGTTGAGACACTTATTTTGGGA 57.066 30.769 0.00 0.00 35.87 4.37
1536 1571 9.880157 AAGTGTCTCAAACTTAGTACAACTTTA 57.120 29.630 0.00 0.00 36.11 1.85
1537 1572 8.788325 AAGTGTCTCAAACTTAGTACAACTTT 57.212 30.769 0.00 0.00 36.11 2.66
1544 1579 9.280174 CCCAAAATAAGTGTCTCAAACTTAGTA 57.720 33.333 2.85 0.00 41.95 1.82
1545 1580 7.996644 TCCCAAAATAAGTGTCTCAAACTTAGT 59.003 33.333 2.85 0.00 41.95 2.24
1546 1581 8.391075 TCCCAAAATAAGTGTCTCAAACTTAG 57.609 34.615 2.85 0.00 41.95 2.18
1547 1582 8.792633 CATCCCAAAATAAGTGTCTCAAACTTA 58.207 33.333 0.00 0.00 42.63 2.24
1548 1583 7.255942 CCATCCCAAAATAAGTGTCTCAAACTT 60.256 37.037 0.00 0.00 40.82 2.66
1549 1584 6.209391 CCATCCCAAAATAAGTGTCTCAAACT 59.791 38.462 0.00 0.00 0.00 2.66
1550 1585 6.208599 TCCATCCCAAAATAAGTGTCTCAAAC 59.791 38.462 0.00 0.00 0.00 2.93
1551 1586 6.310941 TCCATCCCAAAATAAGTGTCTCAAA 58.689 36.000 0.00 0.00 0.00 2.69
1552 1587 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
1553 1588 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
1554 1589 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
1555 1590 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
1556 1591 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
1557 1592 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
1558 1593 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
1559 1594 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
1560 1595 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
1561 1596 7.715267 TTATACTCCCTCCATCCCAAAATAA 57.285 36.000 0.00 0.00 0.00 1.40
1562 1597 7.905144 ATTATACTCCCTCCATCCCAAAATA 57.095 36.000 0.00 0.00 0.00 1.40
1563 1598 6.803587 ATTATACTCCCTCCATCCCAAAAT 57.196 37.500 0.00 0.00 0.00 1.82
1564 1599 6.855061 ACTATTATACTCCCTCCATCCCAAAA 59.145 38.462 0.00 0.00 0.00 2.44
1565 1600 6.399013 ACTATTATACTCCCTCCATCCCAAA 58.601 40.000 0.00 0.00 0.00 3.28
1566 1601 5.989717 ACTATTATACTCCCTCCATCCCAA 58.010 41.667 0.00 0.00 0.00 4.12
1567 1602 5.633473 ACTATTATACTCCCTCCATCCCA 57.367 43.478 0.00 0.00 0.00 4.37
1568 1603 5.338463 GCAACTATTATACTCCCTCCATCCC 60.338 48.000 0.00 0.00 0.00 3.85
1569 1604 5.248477 TGCAACTATTATACTCCCTCCATCC 59.752 44.000 0.00 0.00 0.00 3.51
1570 1605 6.166982 GTGCAACTATTATACTCCCTCCATC 58.833 44.000 0.00 0.00 0.00 3.51
1571 1606 6.115448 GTGCAACTATTATACTCCCTCCAT 57.885 41.667 0.00 0.00 0.00 3.41
1572 1607 5.546621 GTGCAACTATTATACTCCCTCCA 57.453 43.478 0.00 0.00 0.00 3.86
1712 1850 4.387026 TCAGAAATTTCCATCCACAGGT 57.613 40.909 14.61 0.00 0.00 4.00
1735 1873 6.322456 TCCCAAATATCACAAGTTCACAACAA 59.678 34.615 0.00 0.00 0.00 2.83
1841 1979 4.701956 AATCTTAAACGCCCATCACAAG 57.298 40.909 0.00 0.00 0.00 3.16
1850 1988 7.852516 AGAAAATCGATCTAATCTTAAACGCC 58.147 34.615 0.00 0.00 0.00 5.68
1897 2035 5.894807 ACCAATGCTGTACAAATAGAATGC 58.105 37.500 0.00 0.00 0.00 3.56
2270 2410 5.772521 AGATTTGCATCCACACTTGTAAAC 58.227 37.500 0.00 0.00 31.73 2.01
2361 2501 2.163412 GCTCACGGCAATTGATTACCAA 59.837 45.455 10.34 0.00 41.35 3.67
2390 2530 1.187974 CCTCAATTGGCATTGGAGCA 58.812 50.000 5.42 0.00 40.41 4.26
2564 2704 1.153369 ATCGCATGGGTTGTCGAGG 60.153 57.895 9.86 0.00 37.32 4.63
2646 2786 1.898574 CCTTGGCGGTCTTGCAACT 60.899 57.895 0.00 0.00 36.28 3.16
2704 2844 1.180029 CATCCAAGCCAAGAACCCAG 58.820 55.000 0.00 0.00 0.00 4.45
2801 2941 0.252057 TCGGTCCCTGGTCTTCATCA 60.252 55.000 0.00 0.00 0.00 3.07
2824 2964 1.528542 CCAGCCCCTGCATCAGATG 60.529 63.158 5.98 5.98 41.13 2.90
2846 2986 5.363580 TGTATCAGATGAATCACTGCCACTA 59.636 40.000 7.60 0.00 34.57 2.74
2865 3005 5.843673 TCACCATCTTCAGAGTCTGTATC 57.156 43.478 19.53 0.00 32.61 2.24
2972 3112 6.604795 CCTTCATCATTCACTTCTTAACCCAT 59.395 38.462 0.00 0.00 0.00 4.00
3020 3160 0.170561 CTCAACAGCAAGCCATCAGC 59.829 55.000 0.00 0.00 44.25 4.26
3021 3161 0.809385 CCTCAACAGCAAGCCATCAG 59.191 55.000 0.00 0.00 0.00 2.90
3022 3162 0.609957 CCCTCAACAGCAAGCCATCA 60.610 55.000 0.00 0.00 0.00 3.07
3023 3163 0.322816 TCCCTCAACAGCAAGCCATC 60.323 55.000 0.00 0.00 0.00 3.51
3024 3164 0.323178 CTCCCTCAACAGCAAGCCAT 60.323 55.000 0.00 0.00 0.00 4.40
3025 3165 1.073722 CTCCCTCAACAGCAAGCCA 59.926 57.895 0.00 0.00 0.00 4.75
3026 3166 0.250901 TTCTCCCTCAACAGCAAGCC 60.251 55.000 0.00 0.00 0.00 4.35
3027 3167 1.609208 TTTCTCCCTCAACAGCAAGC 58.391 50.000 0.00 0.00 0.00 4.01
3028 3168 4.077822 AGATTTTCTCCCTCAACAGCAAG 58.922 43.478 0.00 0.00 0.00 4.01
3029 3169 4.104383 AGATTTTCTCCCTCAACAGCAA 57.896 40.909 0.00 0.00 0.00 3.91
3121 3261 3.815401 AGCAAAATGGTATCGCTGGTATC 59.185 43.478 0.00 0.00 0.00 2.24
3297 3439 4.577283 CACGAACCCTGTTCTTAAAAAGGA 59.423 41.667 5.53 0.00 41.91 3.36
3343 3485 6.768029 TTTACGTGTACTGTCAATGTTACC 57.232 37.500 0.00 0.00 0.00 2.85
3529 3675 2.089980 GCTGATGGAATTCTGTGTGCT 58.910 47.619 5.23 0.00 0.00 4.40
3540 3686 4.038271 ACAAAATCCTCAGCTGATGGAA 57.962 40.909 27.71 16.89 33.20 3.53
3541 3687 3.726557 ACAAAATCCTCAGCTGATGGA 57.273 42.857 26.77 26.77 0.00 3.41
3542 3688 5.188434 TCTAACAAAATCCTCAGCTGATGG 58.812 41.667 18.63 19.60 0.00 3.51
3543 3689 5.879223 ACTCTAACAAAATCCTCAGCTGATG 59.121 40.000 18.63 15.19 0.00 3.07
3544 3690 6.059787 ACTCTAACAAAATCCTCAGCTGAT 57.940 37.500 18.63 0.00 0.00 2.90
3545 3691 5.489792 ACTCTAACAAAATCCTCAGCTGA 57.510 39.130 17.19 17.19 0.00 4.26
3546 3692 6.166279 TGTACTCTAACAAAATCCTCAGCTG 58.834 40.000 7.63 7.63 0.00 4.24
3547 3693 6.360370 TGTACTCTAACAAAATCCTCAGCT 57.640 37.500 0.00 0.00 0.00 4.24
3548 3694 6.651225 AGTTGTACTCTAACAAAATCCTCAGC 59.349 38.462 0.00 0.00 40.85 4.26
3549 3695 8.499162 CAAGTTGTACTCTAACAAAATCCTCAG 58.501 37.037 0.00 0.00 40.85 3.35
3550 3696 7.990886 ACAAGTTGTACTCTAACAAAATCCTCA 59.009 33.333 6.75 0.00 40.85 3.86
3551 3697 8.379457 ACAAGTTGTACTCTAACAAAATCCTC 57.621 34.615 6.75 0.00 40.85 3.71
3552 3698 9.841295 TTACAAGTTGTACTCTAACAAAATCCT 57.159 29.630 15.31 0.00 40.85 3.24
3574 3720 9.064706 CCGAGTAGAAGTCTTAATCCTATTACA 57.935 37.037 0.00 0.00 0.00 2.41
3575 3721 9.282569 TCCGAGTAGAAGTCTTAATCCTATTAC 57.717 37.037 0.00 0.00 0.00 1.89
3577 3723 8.943594 ATCCGAGTAGAAGTCTTAATCCTATT 57.056 34.615 0.00 0.00 0.00 1.73
3578 3724 8.798402 CAATCCGAGTAGAAGTCTTAATCCTAT 58.202 37.037 0.00 0.00 0.00 2.57
3579 3725 7.778853 ACAATCCGAGTAGAAGTCTTAATCCTA 59.221 37.037 0.00 0.00 0.00 2.94
3580 3726 6.608002 ACAATCCGAGTAGAAGTCTTAATCCT 59.392 38.462 0.00 0.00 0.00 3.24
3581 3727 6.807789 ACAATCCGAGTAGAAGTCTTAATCC 58.192 40.000 0.00 0.00 0.00 3.01
3582 3728 9.968870 ATTACAATCCGAGTAGAAGTCTTAATC 57.031 33.333 0.00 0.00 0.00 1.75
3586 3732 8.414778 CCTTATTACAATCCGAGTAGAAGTCTT 58.585 37.037 0.00 0.00 0.00 3.01
3587 3733 7.470286 GCCTTATTACAATCCGAGTAGAAGTCT 60.470 40.741 0.00 0.00 0.00 3.24
3588 3734 6.641723 GCCTTATTACAATCCGAGTAGAAGTC 59.358 42.308 0.00 0.00 0.00 3.01
3589 3735 6.324254 AGCCTTATTACAATCCGAGTAGAAGT 59.676 38.462 0.00 0.00 0.00 3.01
3590 3736 6.750148 AGCCTTATTACAATCCGAGTAGAAG 58.250 40.000 0.00 0.00 0.00 2.85
3591 3737 6.726490 AGCCTTATTACAATCCGAGTAGAA 57.274 37.500 0.00 0.00 0.00 2.10
3592 3738 6.433404 CCTAGCCTTATTACAATCCGAGTAGA 59.567 42.308 0.00 0.00 0.00 2.59
3593 3739 6.208994 ACCTAGCCTTATTACAATCCGAGTAG 59.791 42.308 0.00 0.00 0.00 2.57
3594 3740 6.073314 ACCTAGCCTTATTACAATCCGAGTA 58.927 40.000 0.00 0.00 0.00 2.59
3595 3741 4.900054 ACCTAGCCTTATTACAATCCGAGT 59.100 41.667 0.00 0.00 0.00 4.18
3596 3742 5.010719 TGACCTAGCCTTATTACAATCCGAG 59.989 44.000 0.00 0.00 0.00 4.63
3597 3743 4.897076 TGACCTAGCCTTATTACAATCCGA 59.103 41.667 0.00 0.00 0.00 4.55
3598 3744 5.010719 TCTGACCTAGCCTTATTACAATCCG 59.989 44.000 0.00 0.00 0.00 4.18
3599 3745 6.420913 TCTGACCTAGCCTTATTACAATCC 57.579 41.667 0.00 0.00 0.00 3.01
3600 3746 7.445945 ACATCTGACCTAGCCTTATTACAATC 58.554 38.462 0.00 0.00 0.00 2.67
3601 3747 7.380423 ACATCTGACCTAGCCTTATTACAAT 57.620 36.000 0.00 0.00 0.00 2.71
3602 3748 6.808321 ACATCTGACCTAGCCTTATTACAA 57.192 37.500 0.00 0.00 0.00 2.41
3603 3749 6.015350 GCTACATCTGACCTAGCCTTATTACA 60.015 42.308 4.71 0.00 0.00 2.41
3604 3750 6.209788 AGCTACATCTGACCTAGCCTTATTAC 59.790 42.308 10.38 0.00 34.55 1.89
3605 3751 6.315714 AGCTACATCTGACCTAGCCTTATTA 58.684 40.000 10.38 0.00 34.55 0.98
3606 3752 5.151454 AGCTACATCTGACCTAGCCTTATT 58.849 41.667 10.38 0.00 34.55 1.40
3607 3753 4.746466 AGCTACATCTGACCTAGCCTTAT 58.254 43.478 10.38 0.00 34.55 1.73
3608 3754 4.186077 AGCTACATCTGACCTAGCCTTA 57.814 45.455 10.38 0.00 34.55 2.69
3609 3755 3.039252 AGCTACATCTGACCTAGCCTT 57.961 47.619 10.38 0.00 34.55 4.35
3610 3756 2.697751 CAAGCTACATCTGACCTAGCCT 59.302 50.000 10.38 0.00 34.55 4.58
3611 3757 2.224161 CCAAGCTACATCTGACCTAGCC 60.224 54.545 10.38 0.00 34.55 3.93
3612 3758 2.804933 GCCAAGCTACATCTGACCTAGC 60.805 54.545 7.15 7.15 34.27 3.42
3613 3759 2.697751 AGCCAAGCTACATCTGACCTAG 59.302 50.000 0.00 0.00 36.99 3.02
3614 3760 2.695666 GAGCCAAGCTACATCTGACCTA 59.304 50.000 0.00 0.00 39.88 3.08
3615 3761 1.484240 GAGCCAAGCTACATCTGACCT 59.516 52.381 0.00 0.00 39.88 3.85
3616 3762 1.484240 AGAGCCAAGCTACATCTGACC 59.516 52.381 0.00 0.00 39.88 4.02
3617 3763 2.977772 AGAGCCAAGCTACATCTGAC 57.022 50.000 0.00 0.00 39.88 3.51
3618 3764 6.924913 ATATAAGAGCCAAGCTACATCTGA 57.075 37.500 0.00 0.00 39.88 3.27
3619 3765 9.743057 GTATATATAAGAGCCAAGCTACATCTG 57.257 37.037 0.00 0.00 39.88 2.90
3620 3766 9.707957 AGTATATATAAGAGCCAAGCTACATCT 57.292 33.333 0.00 0.00 39.88 2.90
3623 3769 9.535170 AGAAGTATATATAAGAGCCAAGCTACA 57.465 33.333 0.00 0.00 39.88 2.74
3626 3772 8.875168 ACAAGAAGTATATATAAGAGCCAAGCT 58.125 33.333 0.00 0.00 43.88 3.74
3630 3776 8.737175 CGGTACAAGAAGTATATATAAGAGCCA 58.263 37.037 0.00 0.00 34.67 4.75
3631 3777 8.189460 CCGGTACAAGAAGTATATATAAGAGCC 58.811 40.741 0.00 0.00 34.67 4.70
3632 3778 7.701501 GCCGGTACAAGAAGTATATATAAGAGC 59.298 40.741 1.90 0.00 34.67 4.09
3633 3779 8.737175 TGCCGGTACAAGAAGTATATATAAGAG 58.263 37.037 1.90 0.00 34.67 2.85
3634 3780 8.640063 TGCCGGTACAAGAAGTATATATAAGA 57.360 34.615 1.90 0.00 34.67 2.10
3641 3787 9.647797 CAATATTATGCCGGTACAAGAAGTATA 57.352 33.333 1.90 0.00 34.67 1.47
3642 3788 8.154856 ACAATATTATGCCGGTACAAGAAGTAT 58.845 33.333 1.90 0.00 34.67 2.12
3643 3789 7.502696 ACAATATTATGCCGGTACAAGAAGTA 58.497 34.615 1.90 0.00 0.00 2.24
3644 3790 6.354130 ACAATATTATGCCGGTACAAGAAGT 58.646 36.000 1.90 0.00 0.00 3.01
3645 3791 6.861065 ACAATATTATGCCGGTACAAGAAG 57.139 37.500 1.90 0.00 0.00 2.85
3646 3792 8.151596 TGATACAATATTATGCCGGTACAAGAA 58.848 33.333 1.90 0.00 0.00 2.52
3647 3793 7.672240 TGATACAATATTATGCCGGTACAAGA 58.328 34.615 1.90 0.00 0.00 3.02
3648 3794 7.899178 TGATACAATATTATGCCGGTACAAG 57.101 36.000 1.90 0.00 0.00 3.16
3649 3795 7.715686 TGTTGATACAATATTATGCCGGTACAA 59.284 33.333 1.90 0.00 0.00 2.41
3650 3796 7.217906 TGTTGATACAATATTATGCCGGTACA 58.782 34.615 1.90 0.00 0.00 2.90
3651 3797 7.661127 TGTTGATACAATATTATGCCGGTAC 57.339 36.000 1.90 0.00 0.00 3.34
3681 3827 9.764363 GTCTGATACCATGTAGAATTGTATTGA 57.236 33.333 0.00 0.00 0.00 2.57
3682 3828 9.770097 AGTCTGATACCATGTAGAATTGTATTG 57.230 33.333 0.00 0.00 0.00 1.90
3686 3832 9.770097 CATAAGTCTGATACCATGTAGAATTGT 57.230 33.333 0.00 0.00 31.10 2.71
3687 3833 9.987272 TCATAAGTCTGATACCATGTAGAATTG 57.013 33.333 0.00 0.00 31.10 2.32
3690 3836 8.807118 GGATCATAAGTCTGATACCATGTAGAA 58.193 37.037 0.00 0.00 36.01 2.10
3691 3837 8.173412 AGGATCATAAGTCTGATACCATGTAGA 58.827 37.037 0.00 0.00 37.20 2.59
3692 3838 8.359875 AGGATCATAAGTCTGATACCATGTAG 57.640 38.462 0.00 0.00 37.20 2.74
3693 3839 9.467796 CTAGGATCATAAGTCTGATACCATGTA 57.532 37.037 0.00 0.00 37.20 2.29
3694 3840 7.398618 CCTAGGATCATAAGTCTGATACCATGT 59.601 40.741 1.05 0.00 37.20 3.21
3695 3841 7.147759 CCCTAGGATCATAAGTCTGATACCATG 60.148 44.444 11.48 0.00 37.20 3.66
3696 3842 6.900186 CCCTAGGATCATAAGTCTGATACCAT 59.100 42.308 11.48 0.00 37.20 3.55
3697 3843 6.183361 ACCCTAGGATCATAAGTCTGATACCA 60.183 42.308 11.48 0.00 37.20 3.25
3698 3844 6.257586 ACCCTAGGATCATAAGTCTGATACC 58.742 44.000 11.48 0.00 37.20 2.73
3699 3845 8.908903 CATACCCTAGGATCATAAGTCTGATAC 58.091 40.741 11.48 0.00 36.01 2.24
3700 3846 8.061920 CCATACCCTAGGATCATAAGTCTGATA 58.938 40.741 11.48 0.00 36.01 2.15
3701 3847 6.900186 CCATACCCTAGGATCATAAGTCTGAT 59.100 42.308 11.48 0.00 38.57 2.90
3702 3848 6.256819 CCATACCCTAGGATCATAAGTCTGA 58.743 44.000 11.48 0.00 0.00 3.27
3703 3849 5.105146 GCCATACCCTAGGATCATAAGTCTG 60.105 48.000 11.48 0.58 0.00 3.51
3704 3850 5.026790 GCCATACCCTAGGATCATAAGTCT 58.973 45.833 11.48 0.00 0.00 3.24
3705 3851 5.026790 AGCCATACCCTAGGATCATAAGTC 58.973 45.833 11.48 0.00 0.00 3.01
3706 3852 5.029973 AGCCATACCCTAGGATCATAAGT 57.970 43.478 11.48 0.00 0.00 2.24
3707 3853 6.127026 GGTTAGCCATACCCTAGGATCATAAG 60.127 46.154 11.48 0.00 34.09 1.73
3708 3854 5.724854 GGTTAGCCATACCCTAGGATCATAA 59.275 44.000 11.48 0.00 34.09 1.90
3709 3855 5.278061 GGTTAGCCATACCCTAGGATCATA 58.722 45.833 11.48 0.00 34.09 2.15
3710 3856 4.104831 GGTTAGCCATACCCTAGGATCAT 58.895 47.826 11.48 0.00 34.09 2.45
3711 3857 3.517612 GGTTAGCCATACCCTAGGATCA 58.482 50.000 11.48 0.00 34.09 2.92
3759 3905 4.874977 GTGCCGCTCGGAGTAGCC 62.875 72.222 13.11 6.56 39.43 3.93
3805 3951 2.128507 GTAGAGGTGGAGGAGGCCG 61.129 68.421 0.00 0.00 0.00 6.13
3806 3952 1.762858 GGTAGAGGTGGAGGAGGCC 60.763 68.421 0.00 0.00 0.00 5.19
3807 3953 0.325765 AAGGTAGAGGTGGAGGAGGC 60.326 60.000 0.00 0.00 0.00 4.70
3808 3954 2.255770 AAAGGTAGAGGTGGAGGAGG 57.744 55.000 0.00 0.00 0.00 4.30
3809 3955 3.955551 GAGTAAAGGTAGAGGTGGAGGAG 59.044 52.174 0.00 0.00 0.00 3.69
3810 3956 3.596956 AGAGTAAAGGTAGAGGTGGAGGA 59.403 47.826 0.00 0.00 0.00 3.71
3811 3957 3.983821 AGAGTAAAGGTAGAGGTGGAGG 58.016 50.000 0.00 0.00 0.00 4.30
3812 3958 4.581409 GCTAGAGTAAAGGTAGAGGTGGAG 59.419 50.000 0.00 0.00 0.00 3.86
3813 3959 4.230041 AGCTAGAGTAAAGGTAGAGGTGGA 59.770 45.833 0.00 0.00 0.00 4.02
3814 3960 4.538738 AGCTAGAGTAAAGGTAGAGGTGG 58.461 47.826 0.00 0.00 0.00 4.61
3815 3961 5.442391 AGAGCTAGAGTAAAGGTAGAGGTG 58.558 45.833 0.00 0.00 0.00 4.00
3816 3962 5.720486 AGAGCTAGAGTAAAGGTAGAGGT 57.280 43.478 0.00 0.00 0.00 3.85
3817 3963 5.999600 GGTAGAGCTAGAGTAAAGGTAGAGG 59.000 48.000 0.00 0.00 0.00 3.69
3818 3964 6.834107 AGGTAGAGCTAGAGTAAAGGTAGAG 58.166 44.000 0.00 0.00 0.00 2.43
3819 3965 6.183361 GGAGGTAGAGCTAGAGTAAAGGTAGA 60.183 46.154 0.00 0.00 0.00 2.59
3820 3966 5.999600 GGAGGTAGAGCTAGAGTAAAGGTAG 59.000 48.000 0.00 0.00 0.00 3.18
3821 3967 5.431073 TGGAGGTAGAGCTAGAGTAAAGGTA 59.569 44.000 0.00 0.00 0.00 3.08
3822 3968 4.230041 TGGAGGTAGAGCTAGAGTAAAGGT 59.770 45.833 0.00 0.00 0.00 3.50
3823 3969 4.581409 GTGGAGGTAGAGCTAGAGTAAAGG 59.419 50.000 0.00 0.00 0.00 3.11
3824 3970 4.581409 GGTGGAGGTAGAGCTAGAGTAAAG 59.419 50.000 0.00 0.00 0.00 1.85
3825 3971 4.017775 TGGTGGAGGTAGAGCTAGAGTAAA 60.018 45.833 0.00 0.00 0.00 2.01
3826 3972 3.526430 TGGTGGAGGTAGAGCTAGAGTAA 59.474 47.826 0.00 0.00 0.00 2.24
3827 3973 3.120898 TGGTGGAGGTAGAGCTAGAGTA 58.879 50.000 0.00 0.00 0.00 2.59
3828 3974 1.923850 TGGTGGAGGTAGAGCTAGAGT 59.076 52.381 0.00 0.00 0.00 3.24
3829 3975 2.691011 GTTGGTGGAGGTAGAGCTAGAG 59.309 54.545 0.00 0.00 0.00 2.43
3830 3976 2.042569 TGTTGGTGGAGGTAGAGCTAGA 59.957 50.000 0.00 0.00 0.00 2.43
3831 3977 2.428890 CTGTTGGTGGAGGTAGAGCTAG 59.571 54.545 0.00 0.00 0.00 3.42
3832 3978 2.457598 CTGTTGGTGGAGGTAGAGCTA 58.542 52.381 0.00 0.00 0.00 3.32
3833 3979 1.270907 CTGTTGGTGGAGGTAGAGCT 58.729 55.000 0.00 0.00 0.00 4.09
3834 3980 0.391793 GCTGTTGGTGGAGGTAGAGC 60.392 60.000 0.00 0.00 0.00 4.09
3835 3981 0.976641 TGCTGTTGGTGGAGGTAGAG 59.023 55.000 0.00 0.00 0.00 2.43
3836 3982 0.685097 GTGCTGTTGGTGGAGGTAGA 59.315 55.000 0.00 0.00 0.00 2.59
3837 3983 0.321653 GGTGCTGTTGGTGGAGGTAG 60.322 60.000 0.00 0.00 0.00 3.18
3838 3984 0.766674 AGGTGCTGTTGGTGGAGGTA 60.767 55.000 0.00 0.00 0.00 3.08
3839 3985 2.056906 GAGGTGCTGTTGGTGGAGGT 62.057 60.000 0.00 0.00 0.00 3.85
3840 3986 1.302832 GAGGTGCTGTTGGTGGAGG 60.303 63.158 0.00 0.00 0.00 4.30
3841 3987 1.302832 GGAGGTGCTGTTGGTGGAG 60.303 63.158 0.00 0.00 0.00 3.86
3842 3988 1.768684 GAGGAGGTGCTGTTGGTGGA 61.769 60.000 0.00 0.00 0.00 4.02
3843 3989 1.302832 GAGGAGGTGCTGTTGGTGG 60.303 63.158 0.00 0.00 0.00 4.61
3844 3990 0.179020 TTGAGGAGGTGCTGTTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
3845 3991 0.179018 GTTGAGGAGGTGCTGTTGGT 60.179 55.000 0.00 0.00 0.00 3.67
3846 3992 0.890996 GGTTGAGGAGGTGCTGTTGG 60.891 60.000 0.00 0.00 0.00 3.77
3847 3993 0.179020 TGGTTGAGGAGGTGCTGTTG 60.179 55.000 0.00 0.00 0.00 3.33
3848 3994 0.773644 ATGGTTGAGGAGGTGCTGTT 59.226 50.000 0.00 0.00 0.00 3.16
3849 3995 0.326264 GATGGTTGAGGAGGTGCTGT 59.674 55.000 0.00 0.00 0.00 4.40
3850 3996 0.393537 GGATGGTTGAGGAGGTGCTG 60.394 60.000 0.00 0.00 0.00 4.41
3851 3997 1.903877 CGGATGGTTGAGGAGGTGCT 61.904 60.000 0.00 0.00 0.00 4.40
3852 3998 1.450312 CGGATGGTTGAGGAGGTGC 60.450 63.158 0.00 0.00 0.00 5.01
3853 3999 1.221840 CCGGATGGTTGAGGAGGTG 59.778 63.158 0.00 0.00 0.00 4.00
3854 4000 2.670148 GCCGGATGGTTGAGGAGGT 61.670 63.158 5.05 0.00 37.67 3.85
3855 4001 2.190578 GCCGGATGGTTGAGGAGG 59.809 66.667 5.05 0.00 37.67 4.30
3856 4002 3.313874 AGCCGGATGGTTGAGGAG 58.686 61.111 5.05 0.00 37.67 3.69
3862 4008 4.778143 GACGCCAGCCGGATGGTT 62.778 66.667 37.37 25.85 42.75 3.67
3865 4011 4.776322 TTGGACGCCAGCCGGATG 62.776 66.667 14.18 14.18 42.52 3.51
3866 4012 4.473520 CTTGGACGCCAGCCGGAT 62.474 66.667 5.05 0.00 42.52 4.18
3870 4016 3.842925 TTGGACTTGGACGCCAGCC 62.843 63.158 0.00 3.94 33.81 4.85
3871 4017 1.896660 TTTGGACTTGGACGCCAGC 60.897 57.895 0.00 0.00 33.81 4.85
3872 4018 0.535102 AGTTTGGACTTGGACGCCAG 60.535 55.000 0.00 0.00 33.81 4.85
3873 4019 0.759959 TAGTTTGGACTTGGACGCCA 59.240 50.000 0.00 0.00 37.33 5.69
3874 4020 1.154197 GTAGTTTGGACTTGGACGCC 58.846 55.000 0.00 0.00 37.33 5.68
3875 4021 1.154197 GGTAGTTTGGACTTGGACGC 58.846 55.000 0.00 0.00 37.33 5.19
3876 4022 1.425412 CGGTAGTTTGGACTTGGACG 58.575 55.000 0.00 0.00 37.33 4.79
3877 4023 1.609841 CCCGGTAGTTTGGACTTGGAC 60.610 57.143 0.00 0.00 37.33 4.02
3878 4024 0.688487 CCCGGTAGTTTGGACTTGGA 59.312 55.000 0.00 0.00 37.33 3.53
3879 4025 0.322187 CCCCGGTAGTTTGGACTTGG 60.322 60.000 0.00 0.00 37.33 3.61
3880 4026 0.958876 GCCCCGGTAGTTTGGACTTG 60.959 60.000 0.00 0.00 37.33 3.16
3881 4027 1.377612 GCCCCGGTAGTTTGGACTT 59.622 57.895 0.00 0.00 37.33 3.01
3882 4028 1.420532 TTGCCCCGGTAGTTTGGACT 61.421 55.000 0.00 0.00 39.97 3.85
3883 4029 0.537828 TTTGCCCCGGTAGTTTGGAC 60.538 55.000 0.00 0.00 0.00 4.02
3884 4030 0.185416 TTTTGCCCCGGTAGTTTGGA 59.815 50.000 0.00 0.00 0.00 3.53
3885 4031 1.041437 TTTTTGCCCCGGTAGTTTGG 58.959 50.000 0.00 0.00 0.00 3.28
3886 4032 2.353307 GGATTTTTGCCCCGGTAGTTTG 60.353 50.000 0.00 0.00 0.00 2.93
3887 4033 1.897133 GGATTTTTGCCCCGGTAGTTT 59.103 47.619 0.00 0.00 0.00 2.66
3888 4034 1.076513 AGGATTTTTGCCCCGGTAGTT 59.923 47.619 0.00 0.00 0.00 2.24
3889 4035 0.702316 AGGATTTTTGCCCCGGTAGT 59.298 50.000 0.00 0.00 0.00 2.73
3890 4036 2.572290 CTAGGATTTTTGCCCCGGTAG 58.428 52.381 0.00 0.00 0.00 3.18
3891 4037 1.213430 CCTAGGATTTTTGCCCCGGTA 59.787 52.381 1.05 0.00 0.00 4.02
3892 4038 0.033503 CCTAGGATTTTTGCCCCGGT 60.034 55.000 1.05 0.00 0.00 5.28
3893 4039 1.391933 GCCTAGGATTTTTGCCCCGG 61.392 60.000 14.75 0.00 0.00 5.73
3894 4040 1.391933 GGCCTAGGATTTTTGCCCCG 61.392 60.000 14.75 0.00 36.07 5.73
3895 4041 1.391933 CGGCCTAGGATTTTTGCCCC 61.392 60.000 14.75 0.00 38.92 5.80
3896 4042 2.016393 GCGGCCTAGGATTTTTGCCC 62.016 60.000 14.75 0.00 38.92 5.36
3897 4043 1.437573 GCGGCCTAGGATTTTTGCC 59.562 57.895 14.75 3.11 38.74 4.52
3898 4044 1.037579 AGGCGGCCTAGGATTTTTGC 61.038 55.000 22.47 5.89 28.47 3.68
3899 4045 1.474330 AAGGCGGCCTAGGATTTTTG 58.526 50.000 24.16 0.00 31.13 2.44
3900 4046 2.241430 ACTAAGGCGGCCTAGGATTTTT 59.759 45.455 24.16 6.38 31.13 1.94
3901 4047 1.844497 ACTAAGGCGGCCTAGGATTTT 59.156 47.619 24.16 7.21 31.13 1.82
3902 4048 1.508256 ACTAAGGCGGCCTAGGATTT 58.492 50.000 24.16 8.03 31.13 2.17
3903 4049 1.416772 GAACTAAGGCGGCCTAGGATT 59.583 52.381 24.16 14.21 31.13 3.01
3904 4050 1.049402 GAACTAAGGCGGCCTAGGAT 58.951 55.000 24.16 12.50 31.13 3.24
3905 4051 1.047034 GGAACTAAGGCGGCCTAGGA 61.047 60.000 24.16 9.96 31.13 2.94
3906 4052 1.446366 GGAACTAAGGCGGCCTAGG 59.554 63.158 24.16 19.41 31.13 3.02
3907 4053 1.067582 CGGAACTAAGGCGGCCTAG 59.932 63.158 24.16 20.36 31.13 3.02
3908 4054 3.085119 GCGGAACTAAGGCGGCCTA 62.085 63.158 24.16 9.83 31.13 3.93
3909 4055 4.468689 GCGGAACTAAGGCGGCCT 62.469 66.667 17.69 17.69 33.87 5.19
3910 4056 4.770874 TGCGGAACTAAGGCGGCC 62.771 66.667 12.11 12.11 0.00 6.13
3911 4057 3.497031 GTGCGGAACTAAGGCGGC 61.497 66.667 0.00 0.00 0.00 6.53
3912 4058 3.186047 CGTGCGGAACTAAGGCGG 61.186 66.667 0.00 0.00 0.00 6.13
3913 4059 2.126228 TCGTGCGGAACTAAGGCG 60.126 61.111 0.00 0.00 0.00 5.52
3914 4060 2.442188 CGTCGTGCGGAACTAAGGC 61.442 63.158 0.00 0.00 36.85 4.35
3915 4061 2.442188 GCGTCGTGCGGAACTAAGG 61.442 63.158 0.00 0.00 41.69 2.69
3916 4062 3.070060 GCGTCGTGCGGAACTAAG 58.930 61.111 0.00 0.00 41.69 2.18
3943 4089 2.359169 TTGGTGGAGCTAGGCGGAG 61.359 63.158 0.00 0.00 0.00 4.63
3944 4090 2.284331 TTGGTGGAGCTAGGCGGA 60.284 61.111 0.00 0.00 0.00 5.54
3945 4091 2.125106 GTTGGTGGAGCTAGGCGG 60.125 66.667 0.00 0.00 0.00 6.13
3946 4092 1.448540 CAGTTGGTGGAGCTAGGCG 60.449 63.158 0.00 0.00 0.00 5.52
3947 4093 0.674895 CACAGTTGGTGGAGCTAGGC 60.675 60.000 0.00 0.00 44.04 3.93
3948 4094 3.540211 CACAGTTGGTGGAGCTAGG 57.460 57.895 0.00 0.00 44.04 3.02
3957 4103 2.123897 GGTGGTGGCACAGTTGGT 60.124 61.111 20.82 0.00 41.80 3.67
3958 4104 3.286751 CGGTGGTGGCACAGTTGG 61.287 66.667 20.82 0.11 41.80 3.77
3959 4105 3.964875 GCGGTGGTGGCACAGTTG 61.965 66.667 20.82 7.36 41.80 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.