>input_sequence_39872
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--------------------------------------------------------------------------ATGATG
GGCGCAGCGAGGAAGATGGCGACGCTGGTCGTCTTTGGCCTGCTTATCACCACTGTCTCTGCAGGAAGAGTGAGTATGCT
CTCCTCTCCAACATCCGCTGAGCATCTGGGACGCTCCTCACTTGCCTCGGTCACCACTTCCTCAAGCAGACCAACAGAAT
CTACAGTTCGTATTGGTACGTCTTTCGTTTCCACCAACCTTTCTGCATATGCTTAAGACATTCCATACTTTTGTACAAGC
TAGGAGATTATCACAGGAGTGTCATCTCGCTGTGACCAACGAGTAGTGCCCTGCACACCCACTGACACCCAGTATGAGCT
CACTTTTCCTAACTAAACTACAGCCCCCAACTACGGCTAATTTTCATTGCGCCTAGTCAGTCATGATCTGAGTAATCCAC
CAGCGCTCTCGGGCTTCTGAAAGTTTTAATTGAGTTGGAATAGAACGTGCACACATGTATACACTTGGCAGGATAACATG
TACTCCCTCCATCCCAAAATAAGTGTCTCAACTTTATACTAACTTTAGTATAAAGTTGTACTAAGTTTGAGACACTTATT
TTGGGATGGAGGGAGTA---------------------------------------------------------------
-------------------------------------TAATAGTTGCACTCAACTCTATGCATATCTAACTTCAAAACAA
TTGTAATGAAGACTGCACACAACTGAGGTGT--GATCCTACA-TTGGTGCATCACAGATTATCATTCCTCCTGTTTGATA
TTTACAGCTACCTGTGGATGGAAATTTCTGAATTGTTGTGAACTTGTGATATTTGGGAACTCCACTAGGACCTGAGTTTC
TCATGTTAGTTTGCATTGCAGCAAGTGTGGGAATGTTAGTTGTACATTCCTGGCAATGCTTGTGATGGGCGTTTAAGATT
AGATCGATTTTCTCAAGAATTTTTTTGTTACATGGCATTCTATTTGTACAGCATTGGTCTAGTTCATACGGCGGCCATAT
TGCACATGGATGCATGTGTTTGTCGCCTTGCGTGTCTTCTGAAATCAGTTGTAGTTCATTGCTGAGTAGATTCTTCTTCA
CCATACTGAATTACTAACTCTGTCAAGTTATAGGCTGTGTTGGTTCCTCAACAGATTCCTCTCGTATTTCATCTACTTGT
ACTAGTTTTATTTTCCTAACAACATCCTAGTACCGCAGAGCGAACGCCTGAACTGCTTTATCTCCACAATCAAGTACTAG
T-TTTTTTTTT-TATATTCAGTTGCTTCAAGAAGTCTGTTCAGACTCTTAGCTAGACCTGCCAACATTAATTCTCGTCCC
TTTGATGCTGTTTACAAGTGTGGATGCAAATCTTGTCACTGATTGAAATTTGCTTGCAGATTCTGTGATTGGCTGCACTC
CAAAGGAAGTGGCGAGAGAATTGGTAATCAATTGCCGTGAGCCTGTCAATGCTCCAATGCCAATTGAGGCTTGCTGCGCG
GTTGCTGTCGGCACTGTTGGAAGGCCCTCCTGCTACTGCTTGGTCAAGGAGGAGGCTGCCTTCGGGATGTCGCCGCTTTT
CAACATCAGCAACATGGCGCAGCTGCTGGCCAGATGTGGCGCGTCAATCTACTTAAACAAGGCCCTCGACAACCCATGCG
ATCGGTCATACGATGAGAAGGAAACAGCTGAGTGCACATCGCCTCAGATGACACCCAAGACAGACAGTTGCAAGACCGCC
AAGGTGTCAGGTTATGTTGCCTGGATACTGGCCGCTGTGTTCGCTGGGTTCTTGGCTTGGATGGTATGTTGCCAACCAGC
ACCGGCAGCACAAGTTGTGTACATGCCAGAGATTCAGTTGGTGAGGCCTAGAGGAAACCATGATGAAGACCAGGGACCGA
GAGCATCTGATGCAGGGGCTGGAACTAGTGGCAGTGATTCATCTGATACAGACTCTGAAGATGGTGAAGATGCTGTTTCG
CATACAAGTCAGGACCTCATCCTGGAAGGGAAGAGGAACCGCAACGCGAACCCGAGGTTCGTTGGAGGTCCATGGGTTAA
GAAGTGA-------------------------------------------------------------------------
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-----------------------------------------------------
>chr7D_1_TraesCS7D01G095100
CCTCCCCCCGCTCCTCGCTCGCGCTCGCTAACATCTCACCATGTCGCTCGACGCTCGGGCGCGCACAGGCAGGCAGGCAG
GCAGCCGCGGATGCACCCATTCCGTCCTCCGCTCCGGCGACGTTGAAGAGGTCGACGGCGCGCGCTTCGCTCACCACCCG
CTTCTCCTCCGCCGCCCCGCCCGCGTGGGTAAGCGCACCATCTCTCCTACCCCTCTCGCC-----------TCCTACCTC
GGCCGCGCCGCGCGTGCGCCCACCAACCGGAGCGCGGCTGGCTGATGGATGGTCGATTTTGGGTCCGTTTTCCATGGATT
TCGGTTCGGTTAGATCATTCTATGCTTCGTAGTA---CATATTTTATGAGCGATTGCTGCTGGATATGGTCCTGTAATGA
TCCCGTCTCTGTCTGTCTCGCTGTATCGGCGTGTGCCTGCCTCTTGTGGTTGTTCTGCTGCAGTGCTGCTTCAGTTCCAG
GCCTCCGTGCTGTCTCCAGTGTCCGCGGTAGCGTGTTAAGGTTCTGGGTCAACTCTGTCGAGTCCTTGGGGTTTGCTGTC
CTGCTGTTGTGTGCCCTGTATGTCTGCTCAGTCTGAATTAAGTTAAGTTCATCTGCTCGTTTGGTATGTGTGTCACTCTG
GTTTCCCCACGCCTGAACATGACTGCATTTTGCTGAACTGGAACG-TGTGGTCATCCAGGACATTGTCTACCAGCAGCGA
CCAACAACTGTGTGTGTGC--AATAATCCAAGCTTGCTTTTGTGGACAATGCGTTGATTGTGGAGGCCTTTGGTCCCCAG
T----TTGCGGACAATTTCTGCTTCCTCCCTGCGGATGGCACCCGCGGCTAGCTTGTACACCTGCCGCATTTTTT-CCTC
AAAAAAAAGTTCTAAAACCTGCCTGATG------------AAATGCCTGAATCTGTGCTCTGTTGATTATTTGCCTAACT
GTTTTATCTAGTTGTTTTCATCTACTGCTGCTGTTTGTTTGAATGCTCCTTTGATGCTATATGCCAGAGAGAAGATGATG
GGCGCAGCGAGGAAGATGGCGACGCTGGTCGTCTTTGGCCTGCTTATCACCACTGTCTCTGCAGGAAGAGTGAGTATGCT
CTCCTCTCCAACATCCGCTGAGCATCTGGGACGCTCCTCACTTGCCTCGGTCACCACTTCCTCAAGCAGACCAACAGAAT
CTACAGTTCGTATTGGTACGTCTTTCGTTTCCACCAACCTTTCTGCATATGCTTAAGACATTCCATACTTTTGTACAAGC
TAGGAGATTATCACAGGAGTGTCATCTCGCTGTGACCAACGAGTAGTGCCCTGCACACCCACTGACACCCAGTATGAGCT
CACTTTTCCTAACTAAACTACAGCCCCCAACTACGGCTAATTTTCATTGCGCCTAGTCAGTCATGATCTGAGTAATCCAC
CAGCGCTCTCGGGCTTCTGAAAGTTTTAATTGAGTTGGAATAGAACGTGCACACATGTATACACTTGGCAGGATAACATG
TACTCCCTCCATCCCAAAATAAGTGTCTCAACTTTATACTAACTTTAGTATAAAGTTGTACTAAGTTTGAGACACTTATT
TTGGGATGGAGGGAGTA---------------------------------------------------------------
-------------------------------------TAATAGTTGCACTCAACTCTATGCATATCTAACTTCAAAACAA
TTGTAATGAAGACTGCACACAACTGAGGTGT--GATCCTACA-TTGGTGCATCACAGATTATCATTCCTCCTGTTTGATA
TTTACAGCTACCTGTGGATGGAAATTTCTGAATTGTTGTGAACTTGTGATATTTGGGAACTCCACTAGGACCTGAGTTTC
TCATGTTAGTTTGCATTGCAGCAAGTGTGGGAATGTTAGTTGTACATTCCTGGCAATGCTTGTGATGGGCGTTTAAGATT
AGATCGATTTTCTCAAGAATTTTTTTGTTACATGGCATTCTATTTGTACAGCATTGGTCTAGTTCATACGGCGGCCATAT
TGCACATGGATGCATGTGTTTGTCGCCTTGCGTGTCTTCTGAAATCAGTTGTAGTTCATTGCTGAGTAGATTCTTCTTCA
CCATACTGAATTACTAACTCTGTCAAGTTATAGGCTGTGTTGGTTCCTCAACAGATTCCTCTCGTATTTCATCTACTTGT
ACTAGTTTTATTTTCCTAACAACATCCTAGTACCGCAGAGCGAACGCCTGAACTGCTTTATCTCCACAATCAAGTACTAG
T-TTTTTTTTT-TATATTCAGTTGCTTCAAGAAGTCTGTTCAGACTCTTAGCTAGACCTGCCAACATTAATTCTCGTCCC
TTTGATGCTGTTTACAAGTGTGGATGCAAATCTTGTCACTGATTGAAATTTGCTTGCAGATTCTGTGATTGGCTGCACTC
CAAAGGAAGTGGCGAGAGAATTGGTAATCAATTGCCGTGAGCCTGTCAATGCTCCAATGCCAATTGAGGCTTGCTGCGCG
GTTGCTGTCGGCACTGTTGGAAGGCCCTCCTGCTACTGCTTGGTCAAGGAGGAGGCTGCCTTCGGGATGTCGCCGCTTTT
CAACATCAGCAACATGGCGCAGCTGCTGGCCAGATGTGGCGCGTCAATCTACTTAAACAAGGCCCTCGACAACCCATGCG
ATCGGTCATACGATGAGAAGGAAACAGCTGAGTGCACATCGCCTCAGATGACACCCAAGACAGACAGTTGCAAGACCGCC
AAGGTGTCAGGTTATGTTGCCTGGATACTGGCCGCTGTGTTCGCTGGGTTCTTGGCTTGGATGGTATGTTGCCAACCAGC
ACCGGCAGCACAAGTTGTGTACATGCCAGAGATTCAGTTGGTGAGGCCTAGAGGAAACCATGATGAAGACCAGGGACCGA
GAGCATCTGATGCAGGGGCTGGAACTAGTGGCAGTGATTCATCTGATACAGACTCTGAAGATGGTGAAGATGCTGTTTCG
CATACAAGTCAGGACCTCATCCTGGAAGGGAAGAGGAACCGCAACGCGAACCCGAGGTTCGTTGGAGGTCCATGGGTTAA
GAAGTGAATGATGAAGGCGAAGTATGCTACTTGAAATATGCTGATGGCTTGCTGTTGAGGGAGAAAATCTTGTCTTGGTA
CTGATTGTATGATCGATTTTGGAGCAACTATGACACAACCGCACTAGCTGTGGTTCTAGGGATACCAGCGATACCATTTT
GCTATATACACATGGTCTTAGAATATTGCTGTAGCGTAAGATTCCTCCCTTGTTGAGATAACACAGCGCTTATGCGTCAT
ACTGTATTGCATTCAGGTGGGGATTTTG--ATTCTCAGTGGCTCACGCGCTGGATGAGCTGGGATGTACTATTTTTTTTC
CTTTTTAAGAACAGGGTTCGTGTGAGGCATGAACAGGCAAGAGCGGTAACATTGACAGTACACGTAAAATCAACTCGATC
CATATTGAAATATCCTTGCTATTCGCAACTCTTATCTTCCTTCCTATTCGCCAGGTTGATCAAAACGTCAGTCCTTTTTG
TTGCC----ATCAGAATCTGCAAGAAACGTAGTACAGTGCATCAGGATAATGTTATAACTTCGCAACTATGATTAGCACA
CAGAATTCCATCAGCTGAGGATTTTGTTAGAGTACAACTTGTAATAGGATTAAGACTTCTACTCGGATTGTAATAAGGCT
AGGTCAGATGTAGCTTGGCTCTTATATATACTTCTTGTACCGGCATAATATTGTATCAACAATTATTCAATACAATTCTA
CATGGTATCAGACTTATGATCCTAGGGTATGGCTAACCCGCCGGCCCCGCCGCCGCCGCCGCCCGGCTACTCCGAGCGGC
ACGCCGCCATCGTCGCCGCCAAGGTCGCCGCGGCCTCCTCCACCTCTACCTTTACTCTAGCTCTACCTCCACCAACAGCA
CCTCCTCAACCATCCGGCTGGCGTCCAAGTCCAAACTACCGGGGCAAAAATCCTAGGCCGCCTTAGTTCCGCACGACGCC
CGCTCCTGCTCCGCCTAGCTCCACCAACTGTGCCACCACCGCCTCCGGCTTCA
>chr7A_54
-----------------------------------------------------CTCGGGCGCGCGCAGGCAGGCAGGCAG
----CCGCGGATGCACCCATTCCGTCCTCCGCTCCGGCGACGTTGAAGAGGTCGACGACGTGCGCTTCGCTCACCACCCG
CTCCTCCTCCGCCGCCCCGCCCGAGTGGGTAAGTGCATCGTCCTCTCCT---------CC-----------CCCTCCCTC
GGCCGCGACGCGCGTGCGCCCGCCAACCGGAGCGCGGCTGGCAGATGGATGACCGATTTTGGGTCTGTTTTCCATGGATT
ACGGTTCGGTTAGATGAATCGATGCTTTT---TA---CATGTTGAATGAGCGATTGCTGCTGGATATGGCCCTGGA----
TCCTGCCTCTGTCTGTCTCGCTGTATCGGTGTGTGCATGCCTGTTGTGGTTGTTCTGCTGCAGTGCTGCTTCAGTTCCAG
GCCTCCGTGCTGTCTGTAGTGTCCGCGGTAGCGTGTTAAGGTTCTGGGTCAACTCTGTCGAGTCCTTGAGGTTGGCTGCC
CTGCTGTTGTGTGCC-TTTATGTCTGCTTAGTCTGAATCAAGTTAAGTTCATCTGCTCGTTTGGTATGTGTGTCACTCTG
GTTTCCCCACGCCTGAACATGACTGCATTTTGCTGAACT-GAACG-TGTGGTCATCCAGGACATTGTCTACCAGCAGCGA
GCTACAACTGTGTGTGTGTGCG-----------------TTGTGGACAATGCGTTGATTGTTGAGGCCTTTGGTTCCCAG
TTTAATTGTGGACAATTTCTGCTTCCTCCATGCGGATGGCACCCGCGGCTAGCTTGTACACCTGCCGCATTTTTT-CCTC
AAAAAAAAGTTCTAAAACCTGCCTGATGTATTGCTTGATGGAATGCCTGAATCTGTGCTCTGTTGATTATTTGCCTAACT
GTTTTATCTAGTTGTTTTCATCTACTACTGCTGTTTGTTTGAATGCTCCTTTGATGCTATATGCCAGAGAGAAGATGATG
GGAGCAGCGAGGAAGATGGCGACGGTGGTCGTCTTTGGCCTGCTTATCACCACTGTCTCTGCAGGAAGAGTGAGTATTCT
TTCCTCTCCAACATCCGCTGAGCATCTGAGACGCTCCTCACTTGCCTCGGCCACCACTTCCTCAAGCAGACCAAAAGACT
CCACAGTTCATATTGGTACGTCTTTCGTTTCCACCAACCTTTCTGTATATGCTTAAGACATTCCGTACTTTTGTACAAGC
TAGGAGATCATCACAGGAGTGTCATCTCGCTGTGACCAACG---AGTGCCCTGCACACCCACTGACACCCAGTATAAGCT
CAATTCTCCTAACTGAACTACAGCCCCCAACTATGGCTAATTTTCATTGCGCTTAGTCAATCATGATCTGAGTAATCCGC
CAGCGCTCCCGGGCTTCTGAAAGTTTTAATTGAGTTGGAATAGAACGTGCACACATGTATACACTTGGCAGGATAACAT-
--------------------------------------------------------------------------------
--------------GTA---------------------------------------------------------------
-------------------------------------TAATAGTTGCACTCAACTCTATGCATATCTAACTTCAAAACAA
TTGTAATGAAGACAGCACACACCTGACGTGTAGGATCCTACATTTGGTGCATCACACATTATCATTCCTCCTGTTTGATA
TTTACAGCTGCCTGTGGATGGAGATTTCTGCAGTGTTGTGAACTTGTGATATTTGGGAACTCCACTAGGACCTGAGTTTC
TCATGTTAGTTTGCATTGCAGCAAGTGTGGGAATGTTAGCTATACATTCCGGGCAATGTTTGTGATGTGTGTTTAAGATT
AGATCGATTTTCTCAAGAATTTTTTTGTTACATGCCATTCTATTTGTACAGCATTGGTCTAGTTCATACGGCGGCCATAT
CGCACATGGATGCATGTGTTTGTCGCCTTGCGTGTCTTCTGAAATCAGTTGTAGTTCATTGTTGAGTAGATTCTTCTTCA
CCATACTGATTTACTAACTCTGTCAAGTTATAGGCTGTGTTGGTTCCTCAACAGATTTCTCTCGTATTTCATCTACTTGT
ACTAGTTTTATTTTCCGAGCAACATCCTAGTACCGCAGAGCGAACGCCTGAACTGCTTTATCTCCACAATCAACTACTAG
T-TTTTTTTTTATATATTCAGTTGCTTCAAGAAGTCTGTTCAGACTCTTAGCTAGACCTGCCAACATTAATTCTCGTCCC
TTTGATGCTATTTACAAGTGTGGATGCATATCTTGTCACTGATTGAAATTTGCTTGCAGATTCTGTGATTGGCTGCACTC
CAAAGGAAGTGGCAAGAGAACTGGTAATCAATTGCCGCGAGCCTGTCAACGCTCCAATGCCAATTGAGGCTTGCTGCGCG
GTCGCTGTCGGCACTGTTGGAAGGCCCTCCTGCTACTGCTTGGTCAAGGAGGAGGCTGCCTTTGGGATGTCGCCGCTTTT
CAACATCAGCAACATGGCGCAGCTGCTGGCCAGATGTGGCGCGTCAATCTACTTAAACAAGGCTCTCGACAACCCATGCG
ATCGGTCATACGATGAGAAGGAAACAGCTGAGTGCACATCGCCTCAGATGACACCCAAGACAGACGGTTGCAAGACCGCC
AAGGTGTCAGGTTATGTTGCCTGGATACTGGCCGCTGTGTTCGGTGGGTTCTTGGCTTGGATGGTATGTTGCCAACCAGC
ACCGGCAGCACAAGTTGTGTACATGCCAGAGATTCAGTTGGTGAGGCCTAGAGGAAACCAAGATGAAGACCAGGGACCGA
GAGGATCTGATGCAGGGGCTGGAACCAGTGGCAGTGATTCATCTAATACAGACTCTGAAGATGGGGAAGATGCTGTTTCG
CATACAAGTCAGGACCTCATCCTGGAAGGGAAGAGGAACCGCAACGCGAACCCGAGGTTCGTTGGAGGTCCGTGGGTTAA
GAAGTGAATGATGAAGGCGAAGTATGCTACTTGAAATA-----------TGCTGTTGAGGGAGAAAATCTTGTCTTGGTA
CTGACTGTATGATCGATTTTGGAGCAACTATGACACAACCGCACTAGCTGTGGTTCTAGGAATACCAGCGATACCATTTT
GCTATATACACATGGTCTTAGAATATTGCTGTAGCGTAAGATTCCTCCCTTGTTGAGATAACACAGCGCTTATGCGTCAT
ACTGTATTGCATTCAGGTGGGGATTTTG--ATTCTCAGTGGCTCACGCGCTGGATGAGCTGGGATGTACTATTTTTTT-C
CTTTTTAAGAACAGGGTTCGTGTGAGGCATGAACAGGCAAGAGCTGTAACATTGACAGTACACGTAAGATCAACTCGATC
CATATTGAAATATCCTTGCTATTCGCAACTCTTATCTTCCTTCCTATTCGCCAGGTTGATCAAAACGTCAATCCTTTTTG
TTGCCATGCATCAGAATCTGCAAGAAACGTAGTACAGTGCATCAGGATAATGTTATAACTTCGCAACTATGATTGGCACA
CAGAA---------------------------------------------------------------------------
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>chr7A_93
--------------------------------------------------------------------------------
------------GCACCCATTCCGTCCTCCGCTCCGGCGACGTTGAAGAGGTCGACGGCGCGCGCTTCGCTCACCACCCG
CTCCTCCTCCGCCGCCCCGCCCGCGTGGGTAAGCGCACCATCCTCTCCT---------CCGCCTCCCCCGGTCCCCCCTC
GGGCGCGACGCGCGTGCGCCGCCAGCCGGA----------GCAGATGGATGACCGATTTTGGGTCCGTTTCCCATGGATT
TCGGTTCGATTAGATGAGTCGGTGCTTTG---TAGTTCATATTGATTGAGCGATTGCTGCTGGATATGGTCCTGGAATGA
TCTTGTTTTTGTCTGTCTCGCTGTATCGTTGTGTGCATGCCTCTTGTGGTTGTTCTGCTGCAGTGCTGCTTCAGTTCCAG
GCCTCCGTGCTGTTTGTAGTGCCCGCGGTAGCGTGTTAAGGTTCTGGGTCAATTCTGTCGAGTCCTTGGGGTTTGCTGCC
CTGCTGTTGTGTGCCTTTTATCTCTGCTTAGTCTGAATCAAGTTAAGTTCATCTGCTCGTTTGGTATGTGTGTCACTCTG
GTTTCCCCGCGCCTGAACATGACTGCATTTTGCTGAACT-GGAACGTGT-------------------------------
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>chr4A_306
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----------------------------------------------------------------------------GATT
TCAGTTTGATTAGATGAATCGATGATTTG---TAGTTCATATTGGATGAGCGATTGCTGCTGGATATGGTCCTGGAATGA
TCCTGTCGCTGTCTGTCTCGCTGTATCGGTGTGTGCACGCCTCTTGTGGTTGTTCTGCTGCAGTGCTGCTTCAGTTCCAG
GCCTCCGCACTGGCTGAAGTGTCCGCGGTAGCATGCTAAGGTTCTGGGTCAACTCTGTCGGGTCCTTGAGGTTTGCTGCT
CTGCTGCTGTGTGCC-TTTATGTCTGCTCAGTCTGAATCAAGTGAAGTTCATCTGCTCGTTTGGTATGTGTGTCACTCTG
GTTTCCCCACGGCTGAACATAACTGCATTTTGCTGAACT-GAAACATGTGGTCGTCCAAGACATTGTCTACCAGCAGTGA
GCAACAACTGTGTGTGTGCGCAATAATCCAAGCTTGCTTCTGTGGACAATGCGTTGATTGTTGAGGCCCTTGGTTCCCAG
T----TTGTGGACAATTTCTGCTTCCTCCATGCGGATGGCACCCGCGGCTAGCTTGTATACCTGCCGCATTTTTT-CCTC
GAAAAAATGTTCTAAAACCTGC----------------------------------------------------------
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>chr7A_667
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----------------------------------------GAACG-TGTAGTCATCCAGGACATTGTCTACCAGCAGCGA
GCTACAACTGTGTGTGTGC--AATAATCCAAATTTGCTTTTGTGGACAATGCGTTGATTGTTGAGGCCTTTGGTTCCCAG
TTGAATTGTGGACAATTTCTGCTTCCTCCATGCGGATGGCACCCGCGGCTAGCTTGTACACCTGCCGCATTTTTTTCCTC
AAAAAAATGTTCTAAAACCTGCCTGATGTATTGCTTGATGAAATGCCTGATTGTGTACTCTGTTGATTATTTGCCTAACT
GTTTTATCTAGTTGTTTTCATCTACTGCTGCTGTTTGTTTGAATGCTCCTTTGATGCTATATGCCAGAGAGAAGATGATG
GGCGCAGCGAGGAAGATGGCGACGGTGGTGGTCTTTGGCCTGCTTATCACCACTGTCTCTGCAGGAAGAGTGAGTATGCT
CTCCTCTCCAACTTCCGCTGAGCATCTGGGACGCTCCTCACTTGCCAAGGTCACCACTTCCTCAAGCAGACCAACAGAAT
CTACAGTTCGTATTGGTACGTTTTTCGTTTCCACCAACCTTTCTGCATATGCTTAAGACATTCCATACTTTTGTACAAGC
TAGGAGATTATCACAGGAGTGTCATCTCGCTGTGACCAACG---AGTGCCCTGCACACCCACTGACACCCAGTATAAGCT
CACTTCTCCTAACTAAACTACAGGCCCCAACTACGGCTAATTTTCATTGCGCCTAGTCAGTTATGATCTTAGTAATCCGC
CAGCGCTCTCGGGCTTCTGAAAGTTTTAATTGAGTTGGAATAGAACGTGCACACATGTATACACTTGGCAGGATAACAT-
--------------------------------------------------------------------------------
--------------GTACTCCCTTCATCCCAAAATAAGTGTCTCAACTTAACTTTATACTAACTTTAGTATAAAGTTGTA
CTAAGTTTGAGACACTTATTTTGGGACGGAGGGAGTATAATAGTTGCACTAAACTCTATGCATATCTAACTTCAAAACAA
TTGTAATGAAGACTGCACACAACTGAGGTGG--GATCCTACA-TTGGTGCATCACAGATTATCTTTCCTCCTGTTTGATA
TTTACAGCTGCCTGTGGATGGAAATTTCTGAAGTGTTGTGAACTTGTGATATTTGGGAACTCCACTAGGACCTCAGTTTC
TCATGTTAGTTTGCATTGCAGCAAGTGTGGGAACGTTAGTTGTACATTCCTGGCAATGGTTGTGATGTGTGTTTAAGATT
AGATTGATTTTCTCAAGATTTTTTTTGTTACATGCCATTCTATTTGTACAGCATTGGTCTAGTTCATACGGTGGCCATAT
CGCACATGGATGCATGTGTTTGTCACCTTGCGTGTCTTCTGAAATCAGTTGTAATTCATTGCTGAGTAGATTCTTCTTCA
CCATACTGAATTACTAACTCTGTCAAGTTATAGGCTGTGTTGGTTCCTCAACAGATTCCTCTCGTATTTCATC------T
ACTAGTTTTATTTTCCTAACAACAT---------------CGAACGCCTGAACTGCTTTATCTCCACAATCAACTACTAG
TTTTTTTTTATATATATTCAGTTGCTTCAAGAAGTCTGTTCAGACTCTTAGCTAGACCTGCCAACATTAATTCTCGTCCC
TTTGATGCTATTTACAAGTGTGGATGCAAATCTTGTCACTGATTGAAATTTGCTTGCAGATTCTGTGATTGGCTGCACTC
CAAAGGAAGTGGCAAGAGAACTGGTAATCAATTGCCGCGAGCCTGTCAACGCTCCAATGCCAATTGAGGCTTGCTGCGCG
GTCGCTGTCGGCACTGTTGGAAGGCCCTCCTGCTACTGCTTGGTCAAGGAGGAGGCTGCCTTTGGGATGTCGCCGCTTTT
CAACATCAGCAACATGGCGCAGCTGCTGGCCAGATGTGGCGCGTCAATCTACTTAAACAAGGCTCTCGACAACCCATGCG
ATCGGTCATACGATGAGAAGGAAACAGCTGAGTGCACATCGCCTCAGATGACACCGAAGACAGACGGTTGCAAGACCGCC
AAGGTGTCAGGTTATGTTGCCTGGATACTGGCTGCTGTGTTCGGTGGGTTCTTGGCTTGGATGGTATGTTGCCAACCAGC
ACCGGCAGCACAAGTTGTGTACATGCCAGAGATTCAGTTGGTGAGGCCTAGAGGAAACCAAGATGAAGACCAGGGACCGA
GAGGATCTGATGCAGGGGCTGGAACCAGTGGCAGTGATTCATCTAATGCAGACTCTGAAGATGGGGAAGATGCTGTTTCG
CATACAAGTCAAGACCTCATCCTGGAAGGGAAGAGGAACCGCAACGCGAACCCGAGGTTCGTTGGAGGTCCGTGGGTTAA
GAAGTGAATGATGAAGGCGAAGTATGCTACTTGAAATA-----------TGCTGTTGAGGGAGAAAATCTTGTCTTGGTA
CTGATTGTATGATCGATTTTGGAGCAACTATGACACAACCGCACTAGCTGTGGTTCTAGGAATACCAGCGATACCATTTT
GCTAT---------------------------AGCGTAAGATTCCTCCCTTGTTGAGATAACACAGCGCTTATGCGTCAT
ACTGTATTGCATTCAGGTGGGGCTTTTGTGATTCTCAGTGGCTCACGCGCTGGATGAGCTGGGATTTACTA-TTTTTT-C
CTTTTTAAGAACAGGGTTGATGTGAGACATGAACAGGCAAGAGCTGTAACATTGATAGTACACGTAAAATCAACTCGATC
CATATTGAAATGTCCTTGCTATTCGCAACTCTTATCGTCTTTCCTATTCGCCAGGCTGATCAAAATGTCAATCCTTTTTG
CTGC----CATCAGAATCTGCAAGAAACGTAGTACAGTGCATC-------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---------------
SSSS----------------------------------------------------------------------------
--S---------------------------------------SSSS-SSSSSSSSSSS-----------------S----
-------S-------------S--------------------S--------SS---------------------------
---------------S-S--S------S-SSS-----------SS-----------------------------S-----
---S-------------------------S------S-------------------------------------------
---------------SS-------------------------------------------------------------S-
---------------S-S--------------------S-----------------------------------------
---------------------------------------S----------------------------------------
S------------------------------------------------------------S------------S-----
--------S--------------------S--------------------------------------------------
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------------------------S-------------------------------------------------------
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-----------------------------------------SSS-------------------------------S----
-----S------------------------------------------------------------------------S-
-------------------------------------------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------S-----------------------------------------------
----------------------------------------------------------S--------S-S----------
----------------------------------S---------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------S------S----------------S-----------S------------------------------
--S-----------------------------------------------------------S-----------------
---------------------------------------------------------------S----------------
-----------------------------------------------------------------S--------------
-------------------------------------------S------------------------------------
------------------------------------------------------------S-------------------
---S---------------------S------------------S-------------------S---------------
-----------------------------------------------------------------------S--------
--------------------------------------SSSSSSSSSSS-------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------S-----------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------S-----
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_51
-------------------------------CATCTCACCATGTCGCTCGA-----------------------------
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>reverse_1065
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------------------------CTGGTCGTCTTTGGCCTGC-------------------------------------
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>forward_52
--------------------------------ATCTCACCATGTCGCTCGAC----------------------------
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>reverse_1366
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--------------------------------------------------------------------------------
-----TTCCTAACTAAACTACAGCCCCC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_559
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GAGTCCTTGGGGTTTGCTGT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2530
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGCTCCAATGCCAATTGAGG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CCTGGCAATGCTTGTGATGG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_3160
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GCTGATGGCTTGCTGTTGAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
