Multiple sequence alignment - TraesCS7D01G072400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G072400 chr7D 100.000 5242 0 0 1 5242 42679437 42684678 0.000000e+00 9681
1 TraesCS7D01G072400 chr7D 97.403 77 1 1 2099 2174 42681463 42681539 4.260000e-26 130
2 TraesCS7D01G072400 chr7D 97.403 77 1 1 2027 2103 42681535 42681610 4.260000e-26 130
3 TraesCS7D01G072400 chr7D 86.066 122 12 4 5123 5242 54373577 54373459 5.510000e-25 126
4 TraesCS7D01G072400 chr4A 90.403 2605 134 36 2100 4636 649895312 649897868 0.000000e+00 3319
5 TraesCS7D01G072400 chr4A 89.537 669 58 3 1431 2098 649894725 649895382 0.000000e+00 837
6 TraesCS7D01G072400 chr4A 87.342 632 43 17 4648 5242 649898004 649898635 0.000000e+00 689
7 TraesCS7D01G072400 chr4A 86.495 622 48 19 813 1430 649894060 649894649 0.000000e+00 651
8 TraesCS7D01G072400 chr4A 81.000 300 9 16 4842 5095 650040401 650040698 1.490000e-45 195
9 TraesCS7D01G072400 chr4A 79.861 288 25 23 13 286 649892988 649893256 4.170000e-41 180
10 TraesCS7D01G072400 chr4A 87.179 117 7 5 5123 5238 460238660 460238769 5.510000e-25 126
11 TraesCS7D01G072400 chr4A 84.921 126 9 9 5123 5242 688910464 688910585 9.220000e-23 119
12 TraesCS7D01G072400 chr7A 88.668 2418 163 40 2240 4579 42003067 42005451 0.000000e+00 2844
13 TraesCS7D01G072400 chr7A 89.521 1212 77 12 907 2099 42001695 42002875 0.000000e+00 1489
14 TraesCS7D01G072400 chr7A 86.818 220 15 7 621 839 42000962 42001168 3.160000e-57 233
15 TraesCS7D01G072400 chr7A 78.947 342 18 23 61 400 41993213 41993502 3.220000e-42 183
16 TraesCS7D01G072400 chr7A 86.667 135 3 4 484 604 41993962 41994095 9.160000e-28 135
17 TraesCS7D01G072400 chr1B 87.097 124 8 5 5120 5242 491543347 491543463 3.290000e-27 134
18 TraesCS7D01G072400 chr3A 86.290 124 10 5 5123 5242 603794818 603794938 1.530000e-25 128
19 TraesCS7D01G072400 chr3D 85.600 125 10 6 5123 5242 307237212 307237091 1.980000e-24 124
20 TraesCS7D01G072400 chr1D 85.271 129 9 9 5123 5242 452344726 452344599 1.980000e-24 124
21 TraesCS7D01G072400 chr2B 83.721 129 14 7 5116 5242 757065181 757065058 1.190000e-21 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G072400 chr7D 42679437 42684678 5241 False 3313.666667 9681 98.268667 1 5242 3 chr7D.!!$F1 5241
1 TraesCS7D01G072400 chr4A 649892988 649898635 5647 False 1135.200000 3319 86.727600 13 5242 5 chr4A.!!$F4 5229
2 TraesCS7D01G072400 chr7A 42000962 42005451 4489 False 1522.000000 2844 88.335667 621 4579 3 chr7A.!!$F2 3958

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 1010 0.032813 ATGATCCACCAAAGCCCAGG 60.033 55.000 0.00 0.00 0.00 4.45 F
821 1105 0.463654 ACGCCACGTATACGACCCTA 60.464 55.000 30.77 0.00 43.02 3.53 F
822 1106 0.662619 CGCCACGTATACGACCCTAA 59.337 55.000 30.77 0.00 43.02 2.69 F
1347 2133 1.152398 TAGCTAGGCTAACCCGGGG 60.152 63.158 27.92 12.73 38.27 5.73 F
2449 3496 0.458260 GTGCACCTTCCGGTTTTGTT 59.542 50.000 5.22 0.00 42.13 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 2597 0.317854 GAAAACGGCAGGCACAGTTC 60.318 55.000 0.0 0.0 0.00 3.01 R
2251 3296 1.347378 TGCTCAGTGACATGCCTAACA 59.653 47.619 0.0 0.0 0.00 2.41 R
2320 3367 2.009774 CCGTTGTTCTATGCAAGGAGG 58.990 52.381 0.0 0.0 34.73 4.30 R
2842 3893 2.139917 GTTGCAGAACGGATGTACACA 58.860 47.619 0.0 0.0 0.00 3.72 R
4260 5337 1.332904 GCGAGTTGTTGTCAGGTTTCG 60.333 52.381 0.0 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.750778 ACAACAGTTTGCAGTGGAAGG 59.249 47.619 0.00 0.00 36.00 3.46
34 35 0.034670 AGTGGAAGGAGAGCATTGCC 60.035 55.000 4.70 0.00 0.00 4.52
44 45 0.174162 GAGCATTGCCCAATGGACAC 59.826 55.000 19.31 5.89 46.14 3.67
50 51 2.104253 GCCCAATGGACACGTACGG 61.104 63.158 21.06 11.05 0.00 4.02
51 52 1.294138 CCCAATGGACACGTACGGT 59.706 57.895 21.06 14.36 0.00 4.83
53 54 0.245539 CCAATGGACACGTACGGTCT 59.754 55.000 25.58 12.21 35.61 3.85
55 56 0.529378 AATGGACACGTACGGTCTCC 59.471 55.000 25.58 21.52 35.61 3.71
56 57 0.323178 ATGGACACGTACGGTCTCCT 60.323 55.000 25.58 14.07 35.61 3.69
57 58 0.538057 TGGACACGTACGGTCTCCTT 60.538 55.000 25.58 2.28 35.61 3.36
59 60 0.109412 GACACGTACGGTCTCCTTGG 60.109 60.000 21.06 0.00 32.54 3.61
60 61 1.214589 CACGTACGGTCTCCTTGGG 59.785 63.158 21.06 0.00 0.00 4.12
61 62 1.980772 ACGTACGGTCTCCTTGGGG 60.981 63.158 21.06 0.00 0.00 4.96
62 63 1.679977 CGTACGGTCTCCTTGGGGA 60.680 63.158 7.57 0.00 39.70 4.81
73 83 2.251818 TCCTTGGGGAGATCATCGATC 58.748 52.381 0.00 0.00 39.17 3.69
106 119 1.745489 GGAAGGATCCACCACGTGC 60.745 63.158 15.82 0.00 45.79 5.34
145 158 3.851955 GGCAATCCATCCAGCCAG 58.148 61.111 0.00 0.00 46.26 4.85
146 159 1.228228 GGCAATCCATCCAGCCAGA 59.772 57.895 0.00 0.00 46.26 3.86
147 160 0.396139 GGCAATCCATCCAGCCAGAA 60.396 55.000 0.00 0.00 46.26 3.02
151 164 2.950309 CAATCCATCCAGCCAGAAAGAG 59.050 50.000 0.00 0.00 0.00 2.85
160 173 1.486644 GCCAGAAAGAGCGAGCGATC 61.487 60.000 0.00 0.00 0.00 3.69
161 174 1.205485 CCAGAAAGAGCGAGCGATCG 61.205 60.000 20.40 20.40 35.44 3.69
162 175 0.248255 CAGAAAGAGCGAGCGATCGA 60.248 55.000 29.29 0.00 35.44 3.59
163 176 0.248296 AGAAAGAGCGAGCGATCGAC 60.248 55.000 29.29 19.05 35.44 4.20
164 177 1.203600 GAAAGAGCGAGCGATCGACC 61.204 60.000 29.29 16.79 35.44 4.79
165 178 2.921538 AAAGAGCGAGCGATCGACCG 62.922 60.000 29.29 20.74 35.44 4.79
166 179 3.938253 GAGCGAGCGATCGACCGA 61.938 66.667 29.29 0.00 34.64 4.69
167 180 3.243274 GAGCGAGCGATCGACCGAT 62.243 63.158 29.29 22.01 37.59 4.18
168 181 2.797439 GCGAGCGATCGACCGATC 60.797 66.667 29.29 19.20 45.42 3.69
179 192 1.012234 GACCGATCGATGCGTTTGC 60.012 57.895 18.66 0.00 43.20 3.68
183 196 1.353103 GATCGATGCGTTTGCCAGG 59.647 57.895 0.54 0.00 41.78 4.45
227 240 4.339809 CACGCACGCACACTGTCG 62.340 66.667 0.00 1.10 0.00 4.35
252 265 0.624254 ATCCGGGAAAAGGTCCTTCC 59.376 55.000 4.10 2.50 46.92 3.46
269 282 0.181114 TCCCATGCAAGATCCGGAAG 59.819 55.000 9.01 0.00 0.00 3.46
277 290 2.224161 GCAAGATCCGGAAGCTCATACT 60.224 50.000 9.01 0.00 0.00 2.12
279 292 1.883275 AGATCCGGAAGCTCATACTCG 59.117 52.381 9.01 0.00 0.00 4.18
286 299 4.156190 CCGGAAGCTCATACTCGTGTATAT 59.844 45.833 9.64 0.00 37.28 0.86
287 300 5.325494 CGGAAGCTCATACTCGTGTATATC 58.675 45.833 9.64 3.18 37.28 1.63
289 302 6.567891 CGGAAGCTCATACTCGTGTATATCAA 60.568 42.308 9.64 0.00 37.28 2.57
290 303 6.804295 GGAAGCTCATACTCGTGTATATCAAG 59.196 42.308 9.64 6.88 37.28 3.02
291 304 6.260870 AGCTCATACTCGTGTATATCAAGG 57.739 41.667 9.64 0.00 37.28 3.61
293 306 6.661377 AGCTCATACTCGTGTATATCAAGGAT 59.339 38.462 9.64 0.00 37.28 3.24
294 307 7.177568 AGCTCATACTCGTGTATATCAAGGATT 59.822 37.037 9.64 0.00 37.28 3.01
295 308 7.486551 GCTCATACTCGTGTATATCAAGGATTC 59.513 40.741 9.64 0.00 37.28 2.52
297 310 8.856103 TCATACTCGTGTATATCAAGGATTCAA 58.144 33.333 9.64 0.00 37.28 2.69
298 311 9.133627 CATACTCGTGTATATCAAGGATTCAAG 57.866 37.037 9.64 0.00 37.28 3.02
299 312 7.348080 ACTCGTGTATATCAAGGATTCAAGA 57.652 36.000 0.00 0.00 0.00 3.02
300 313 7.429633 ACTCGTGTATATCAAGGATTCAAGAG 58.570 38.462 0.00 0.00 33.84 2.85
301 314 6.749139 TCGTGTATATCAAGGATTCAAGAGG 58.251 40.000 0.00 0.00 0.00 3.69
303 316 7.069455 TCGTGTATATCAAGGATTCAAGAGGAA 59.931 37.037 0.00 0.00 40.46 3.36
304 317 7.710907 CGTGTATATCAAGGATTCAAGAGGAAA 59.289 37.037 0.00 0.00 39.39 3.13
305 318 9.396022 GTGTATATCAAGGATTCAAGAGGAAAA 57.604 33.333 0.00 0.00 39.39 2.29
306 319 9.973661 TGTATATCAAGGATTCAAGAGGAAAAA 57.026 29.630 0.00 0.00 39.39 1.94
331 344 2.603021 AGAAGAAGTCTCTCTGCACCA 58.397 47.619 0.00 0.00 0.00 4.17
333 346 2.829741 AGAAGTCTCTCTGCACCAAC 57.170 50.000 0.00 0.00 0.00 3.77
334 347 2.042464 AGAAGTCTCTCTGCACCAACA 58.958 47.619 0.00 0.00 0.00 3.33
336 349 2.758736 AGTCTCTCTGCACCAACATC 57.241 50.000 0.00 0.00 0.00 3.06
339 352 1.693606 TCTCTCTGCACCAACATCACA 59.306 47.619 0.00 0.00 0.00 3.58
340 353 2.303890 TCTCTCTGCACCAACATCACAT 59.696 45.455 0.00 0.00 0.00 3.21
341 354 3.079578 CTCTCTGCACCAACATCACATT 58.920 45.455 0.00 0.00 0.00 2.71
342 355 2.815503 TCTCTGCACCAACATCACATTG 59.184 45.455 0.00 0.00 0.00 2.82
348 361 1.843368 CCAACATCACATTGGCCTCT 58.157 50.000 3.32 0.00 40.25 3.69
349 362 1.747355 CCAACATCACATTGGCCTCTC 59.253 52.381 3.32 0.00 40.25 3.20
350 363 2.439409 CAACATCACATTGGCCTCTCA 58.561 47.619 3.32 0.00 0.00 3.27
352 365 1.632409 ACATCACATTGGCCTCTCAGT 59.368 47.619 3.32 0.00 0.00 3.41
353 366 2.840038 ACATCACATTGGCCTCTCAGTA 59.160 45.455 3.32 0.00 0.00 2.74
354 367 3.457380 ACATCACATTGGCCTCTCAGTAT 59.543 43.478 3.32 0.00 0.00 2.12
355 368 3.827008 TCACATTGGCCTCTCAGTATC 57.173 47.619 3.32 0.00 0.00 2.24
356 369 3.378512 TCACATTGGCCTCTCAGTATCT 58.621 45.455 3.32 0.00 0.00 1.98
357 370 3.133542 TCACATTGGCCTCTCAGTATCTG 59.866 47.826 3.32 0.00 0.00 2.90
358 371 3.133542 CACATTGGCCTCTCAGTATCTGA 59.866 47.826 3.32 0.00 38.25 3.27
359 372 3.972638 ACATTGGCCTCTCAGTATCTGAT 59.027 43.478 3.32 0.00 39.92 2.90
360 373 4.411540 ACATTGGCCTCTCAGTATCTGATT 59.588 41.667 3.32 0.00 39.92 2.57
361 374 4.679373 TTGGCCTCTCAGTATCTGATTC 57.321 45.455 3.32 0.00 39.92 2.52
362 375 3.921104 TGGCCTCTCAGTATCTGATTCT 58.079 45.455 3.32 0.00 39.92 2.40
364 377 3.894427 GGCCTCTCAGTATCTGATTCTGA 59.106 47.826 21.01 21.01 39.92 3.27
366 379 5.336690 GGCCTCTCAGTATCTGATTCTGATC 60.337 48.000 22.08 13.60 39.92 2.92
367 380 5.336690 GCCTCTCAGTATCTGATTCTGATCC 60.337 48.000 22.08 10.66 39.92 3.36
368 381 5.185635 CCTCTCAGTATCTGATTCTGATCCC 59.814 48.000 22.08 3.08 39.92 3.85
370 383 4.474394 TCAGTATCTGATTCTGATCCCGT 58.526 43.478 19.20 0.00 35.39 5.28
373 386 4.764823 AGTATCTGATTCTGATCCCGTCTC 59.235 45.833 9.08 0.00 0.00 3.36
374 387 1.950216 TCTGATTCTGATCCCGTCTCG 59.050 52.381 0.00 0.00 0.00 4.04
375 388 1.678627 CTGATTCTGATCCCGTCTCGT 59.321 52.381 0.00 0.00 0.00 4.18
378 391 0.392060 TTCTGATCCCGTCTCGTCGA 60.392 55.000 0.00 0.00 0.00 4.20
379 392 1.088340 TCTGATCCCGTCTCGTCGAC 61.088 60.000 5.18 5.18 39.33 4.20
381 394 0.746923 TGATCCCGTCTCGTCGACAT 60.747 55.000 17.16 0.00 42.98 3.06
382 395 0.041135 GATCCCGTCTCGTCGACATC 60.041 60.000 17.16 4.47 42.98 3.06
383 396 0.464013 ATCCCGTCTCGTCGACATCT 60.464 55.000 17.16 0.00 42.98 2.90
384 397 1.088340 TCCCGTCTCGTCGACATCTC 61.088 60.000 17.16 2.22 42.98 2.75
386 399 1.648756 CGTCTCGTCGACATCTCGC 60.649 63.158 17.16 0.00 42.98 5.03
387 400 1.716760 GTCTCGTCGACATCTCGCT 59.283 57.895 17.16 0.00 42.37 4.93
388 401 0.315544 GTCTCGTCGACATCTCGCTC 60.316 60.000 17.16 0.00 42.37 5.03
389 402 1.367078 CTCGTCGACATCTCGCTCG 60.367 63.158 17.16 0.00 39.96 5.03
390 403 2.351322 CGTCGACATCTCGCTCGG 60.351 66.667 17.16 0.00 39.96 4.63
391 404 2.652496 GTCGACATCTCGCTCGGC 60.652 66.667 11.55 0.00 39.96 5.54
407 420 2.969238 GCGACCGATGGAGCATGG 60.969 66.667 0.00 0.00 32.47 3.66
408 421 2.969238 CGACCGATGGAGCATGGC 60.969 66.667 0.00 0.00 0.00 4.40
411 424 2.969238 CCGATGGAGCATGGCGAC 60.969 66.667 0.00 0.00 0.00 5.19
412 425 3.333189 CGATGGAGCATGGCGACG 61.333 66.667 0.00 0.00 0.00 5.12
413 426 2.969238 GATGGAGCATGGCGACGG 60.969 66.667 0.00 0.00 0.00 4.79
431 444 2.663852 CGACGGGTGGCGTTCTTT 60.664 61.111 0.00 0.00 0.00 2.52
450 463 2.011540 TTTTGAAACAAACGGGTGGC 57.988 45.000 0.00 0.00 0.00 5.01
451 464 0.179134 TTTGAAACAAACGGGTGGCG 60.179 50.000 0.00 0.00 0.00 5.69
452 465 1.313812 TTGAAACAAACGGGTGGCGT 61.314 50.000 0.00 0.00 0.00 5.68
453 466 1.313812 TGAAACAAACGGGTGGCGTT 61.314 50.000 0.00 0.00 0.00 4.84
454 467 0.593008 GAAACAAACGGGTGGCGTTC 60.593 55.000 0.00 0.00 0.00 3.95
455 468 1.033202 AAACAAACGGGTGGCGTTCT 61.033 50.000 0.00 0.00 0.00 3.01
456 469 1.720694 AACAAACGGGTGGCGTTCTG 61.721 55.000 0.00 0.00 0.00 3.02
457 470 2.593436 AAACGGGTGGCGTTCTGG 60.593 61.111 0.00 0.00 0.00 3.86
458 471 4.636435 AACGGGTGGCGTTCTGGG 62.636 66.667 0.00 0.00 0.00 4.45
460 473 4.096003 CGGGTGGCGTTCTGGGAT 62.096 66.667 0.00 0.00 0.00 3.85
461 474 2.727392 CGGGTGGCGTTCTGGGATA 61.727 63.158 0.00 0.00 0.00 2.59
462 475 1.837090 GGGTGGCGTTCTGGGATAT 59.163 57.895 0.00 0.00 0.00 1.63
463 476 1.053424 GGGTGGCGTTCTGGGATATA 58.947 55.000 0.00 0.00 0.00 0.86
464 477 1.270678 GGGTGGCGTTCTGGGATATAC 60.271 57.143 0.00 0.00 0.00 1.47
465 478 1.692519 GGTGGCGTTCTGGGATATACT 59.307 52.381 0.00 0.00 0.00 2.12
466 479 2.895404 GGTGGCGTTCTGGGATATACTA 59.105 50.000 0.00 0.00 0.00 1.82
467 480 3.514309 GGTGGCGTTCTGGGATATACTAT 59.486 47.826 0.00 0.00 0.00 2.12
472 485 3.428999 CGTTCTGGGATATACTATGCCCG 60.429 52.174 2.70 0.00 43.70 6.13
474 487 1.139058 CTGGGATATACTATGCCCGGC 59.861 57.143 1.04 1.04 43.70 6.13
475 488 1.273609 TGGGATATACTATGCCCGGCT 60.274 52.381 11.61 0.00 43.70 5.52
479 492 3.181474 GGATATACTATGCCCGGCTTCTC 60.181 52.174 11.61 0.00 0.00 2.87
480 493 1.717032 ATACTATGCCCGGCTTCTCA 58.283 50.000 11.61 0.00 0.00 3.27
483 496 1.212935 ACTATGCCCGGCTTCTCAAAT 59.787 47.619 11.61 0.00 0.00 2.32
484 497 1.876156 CTATGCCCGGCTTCTCAAATC 59.124 52.381 11.61 0.00 0.00 2.17
485 498 0.257039 ATGCCCGGCTTCTCAAATCT 59.743 50.000 11.61 0.00 0.00 2.40
486 499 0.392998 TGCCCGGCTTCTCAAATCTC 60.393 55.000 11.61 0.00 0.00 2.75
487 500 0.392998 GCCCGGCTTCTCAAATCTCA 60.393 55.000 0.71 0.00 0.00 3.27
490 503 2.615912 CCCGGCTTCTCAAATCTCAATC 59.384 50.000 0.00 0.00 0.00 2.67
494 507 3.486542 GGCTTCTCAAATCTCAATCGTGC 60.487 47.826 0.00 0.00 0.00 5.34
497 510 3.930336 TCTCAAATCTCAATCGTGCAGT 58.070 40.909 0.00 0.00 0.00 4.40
499 512 4.864806 TCTCAAATCTCAATCGTGCAGTAC 59.135 41.667 0.00 0.00 0.00 2.73
508 521 2.181021 GTGCAGTACGTCCTCGGG 59.819 66.667 0.00 0.00 41.85 5.14
509 522 2.282674 TGCAGTACGTCCTCGGGT 60.283 61.111 0.00 0.00 41.85 5.28
510 523 2.338015 TGCAGTACGTCCTCGGGTC 61.338 63.158 0.00 0.00 41.85 4.46
511 524 2.338015 GCAGTACGTCCTCGGGTCA 61.338 63.158 0.00 0.00 41.85 4.02
512 525 1.801332 CAGTACGTCCTCGGGTCAG 59.199 63.158 0.00 0.00 41.85 3.51
513 526 1.378250 AGTACGTCCTCGGGTCAGG 60.378 63.158 0.00 0.00 41.85 3.86
514 527 1.676967 GTACGTCCTCGGGTCAGGT 60.677 63.158 0.00 0.00 41.85 4.00
515 528 1.377725 TACGTCCTCGGGTCAGGTC 60.378 63.158 0.00 0.00 41.85 3.85
518 531 1.686110 GTCCTCGGGTCAGGTCCAT 60.686 63.158 0.00 0.00 34.76 3.41
519 532 1.685765 TCCTCGGGTCAGGTCCATG 60.686 63.158 0.00 0.00 34.76 3.66
521 534 2.687200 TCGGGTCAGGTCCATGGG 60.687 66.667 13.02 0.00 0.00 4.00
522 535 3.797353 CGGGTCAGGTCCATGGGG 61.797 72.222 13.02 0.00 0.00 4.96
523 536 2.614013 GGGTCAGGTCCATGGGGT 60.614 66.667 13.02 0.00 34.93 4.95
524 537 2.677228 GGTCAGGTCCATGGGGTG 59.323 66.667 13.02 7.22 34.93 4.61
533 546 4.424711 CATGGGGTGGGTCGGGTG 62.425 72.222 0.00 0.00 0.00 4.61
619 903 0.241749 CGGCATGTCAGTGCATTTGT 59.758 50.000 0.00 0.00 46.81 2.83
660 944 1.032014 TTGTTTGAGCAACTGCCCTC 58.968 50.000 0.00 0.00 43.38 4.30
697 981 4.127907 GAGCTAATGTTTACTGGGCCTAC 58.872 47.826 4.53 0.00 0.00 3.18
726 1010 0.032813 ATGATCCACCAAAGCCCAGG 60.033 55.000 0.00 0.00 0.00 4.45
812 1096 2.744709 GCCCAACACGCCACGTAT 60.745 61.111 0.00 0.00 38.32 3.06
813 1097 1.448189 GCCCAACACGCCACGTATA 60.448 57.895 0.00 0.00 38.32 1.47
814 1098 1.698714 GCCCAACACGCCACGTATAC 61.699 60.000 0.00 0.00 38.32 1.47
815 1099 1.415288 CCCAACACGCCACGTATACG 61.415 60.000 23.24 23.24 38.32 3.06
819 1103 1.587088 CACGCCACGTATACGACCC 60.587 63.158 30.77 15.90 43.02 4.46
820 1104 1.750399 ACGCCACGTATACGACCCT 60.750 57.895 30.77 6.27 43.02 4.34
821 1105 0.463654 ACGCCACGTATACGACCCTA 60.464 55.000 30.77 0.00 43.02 3.53
822 1106 0.662619 CGCCACGTATACGACCCTAA 59.337 55.000 30.77 0.00 43.02 2.69
846 1161 7.898014 AAGGTTTACTTTTTCTCCAGAACAT 57.102 32.000 0.00 0.00 35.35 2.71
866 1181 1.520600 CCAACGTGCCTAACCCAACC 61.521 60.000 0.00 0.00 0.00 3.77
910 1689 1.848652 TCCGAACCAAACCAAACCAA 58.151 45.000 0.00 0.00 0.00 3.67
911 1690 2.176889 TCCGAACCAAACCAAACCAAA 58.823 42.857 0.00 0.00 0.00 3.28
912 1691 2.094130 TCCGAACCAAACCAAACCAAAC 60.094 45.455 0.00 0.00 0.00 2.93
913 1692 2.272678 CGAACCAAACCAAACCAAACC 58.727 47.619 0.00 0.00 0.00 3.27
914 1693 2.353803 CGAACCAAACCAAACCAAACCA 60.354 45.455 0.00 0.00 0.00 3.67
963 1742 3.998672 GCGAACTGACCCACCCGA 61.999 66.667 0.00 0.00 0.00 5.14
964 1743 2.048503 CGAACTGACCCACCCGAC 60.049 66.667 0.00 0.00 0.00 4.79
965 1744 2.346365 GAACTGACCCACCCGACC 59.654 66.667 0.00 0.00 0.00 4.79
966 1745 3.246880 AACTGACCCACCCGACCC 61.247 66.667 0.00 0.00 0.00 4.46
1092 1878 1.879796 GCTTCCGCTCCCATTATCCTG 60.880 57.143 0.00 0.00 0.00 3.86
1207 1993 1.758592 CCCGACAAGAAGGTTCCCA 59.241 57.895 0.00 0.00 0.00 4.37
1218 2004 2.590092 GTTCCCATCCCTCACCCG 59.410 66.667 0.00 0.00 0.00 5.28
1220 2006 3.943137 TTCCCATCCCTCACCCGCT 62.943 63.158 0.00 0.00 0.00 5.52
1343 2129 3.258622 CCAGTATGTAGCTAGGCTAACCC 59.741 52.174 0.00 0.00 43.07 4.11
1347 2133 1.152398 TAGCTAGGCTAACCCGGGG 60.152 63.158 27.92 12.73 38.27 5.73
1362 2148 1.831389 CGGGGCAGACGAATTATGCG 61.831 60.000 0.00 0.00 40.90 4.73
1391 2178 6.316640 TCATTCGTAAGTGGTGTTCTGAAAAA 59.683 34.615 0.00 0.00 39.48 1.94
1433 2295 5.559417 GCTCATTGTTGCAGTTGAAAAATGG 60.559 40.000 0.00 0.00 43.12 3.16
1463 2325 3.784338 CAAATGTGTGCAAGTGGACTTT 58.216 40.909 4.53 0.00 37.28 2.66
1478 2340 4.738252 GTGGACTTTCATTTGGAACGTTTC 59.262 41.667 0.46 0.00 38.03 2.78
1518 2380 7.237173 GTGCTTGTAATTGAGTTGATGAGTAC 58.763 38.462 0.00 0.00 0.00 2.73
1539 2401 7.237982 AGTACTATGACTTATGAGAGGCAGAT 58.762 38.462 0.00 0.00 38.26 2.90
1601 2463 5.290493 AGGCATCCGTCAGTAATAAATCA 57.710 39.130 0.00 0.00 0.00 2.57
1687 2549 7.568199 ACACAAAGTTCTATTTAACTGCTGT 57.432 32.000 0.00 0.00 39.62 4.40
1688 2550 7.996385 ACACAAAGTTCTATTTAACTGCTGTT 58.004 30.769 13.80 13.80 39.62 3.16
1689 2551 8.466798 ACACAAAGTTCTATTTAACTGCTGTTT 58.533 29.630 14.54 0.00 39.62 2.83
1690 2552 9.301153 CACAAAGTTCTATTTAACTGCTGTTTT 57.699 29.630 14.54 3.34 39.62 2.43
1691 2553 9.516314 ACAAAGTTCTATTTAACTGCTGTTTTC 57.484 29.630 14.54 0.00 39.62 2.29
1692 2554 9.736023 CAAAGTTCTATTTAACTGCTGTTTTCT 57.264 29.630 14.54 2.51 39.62 2.52
1707 2569 8.495361 TGCTGTTTTCTTAACACTAAGTTACA 57.505 30.769 0.00 0.00 42.19 2.41
1735 2597 7.907045 GCTGTGTAATCTGATAATGTGTTTGAG 59.093 37.037 0.00 0.00 0.00 3.02
1744 2606 3.715628 AATGTGTTTGAGAACTGTGCC 57.284 42.857 0.00 0.00 36.70 5.01
1761 2623 1.244816 GCCTGCCGTTTTCTTAACCT 58.755 50.000 0.00 0.00 0.00 3.50
1769 2631 4.377897 CCGTTTTCTTAACCTGACTGTCT 58.622 43.478 9.51 0.00 0.00 3.41
1773 2635 6.183360 CGTTTTCTTAACCTGACTGTCTTGTT 60.183 38.462 9.51 13.46 0.00 2.83
1780 2642 2.223572 CCTGACTGTCTTGTTGGTTTGC 60.224 50.000 9.51 0.00 0.00 3.68
1798 2660 1.307097 GCTCTGCTCATTCCCATGAC 58.693 55.000 0.00 0.00 34.22 3.06
1828 2691 1.909302 GAGGGTTGAGAGAATGGGTCA 59.091 52.381 0.00 0.00 0.00 4.02
1837 2700 7.201767 GGTTGAGAGAATGGGTCAGAATATTTG 60.202 40.741 0.00 0.00 0.00 2.32
1841 2704 2.051334 TGGGTCAGAATATTTGGGCG 57.949 50.000 0.00 0.00 0.00 6.13
1848 2711 4.393680 GTCAGAATATTTGGGCGTGTAACA 59.606 41.667 0.00 0.00 35.74 2.41
1855 2718 2.039818 TGGGCGTGTAACAAAGTGAA 57.960 45.000 0.00 0.00 35.74 3.18
2015 2891 3.681594 CGGGGCACATCTTACAGTTATGT 60.682 47.826 0.00 0.00 43.76 2.29
2041 2917 4.164796 AGGCTCCTGTATGATGTTTGATGA 59.835 41.667 0.00 0.00 0.00 2.92
2057 2933 7.496747 TGTTTGATGAATCACACGATAGGATA 58.503 34.615 5.40 0.00 39.65 2.59
2063 2939 9.639601 GATGAATCACACGATAGGATACAATTA 57.360 33.333 0.00 0.00 43.77 1.40
2069 2945 6.091305 CACACGATAGGATACAATTATGGCAG 59.909 42.308 0.00 0.00 43.77 4.85
2078 2954 8.168725 AGGATACAATTATGGCAGATTTCATCT 58.831 33.333 0.00 0.00 38.97 2.90
2090 2966 5.728637 AGATTTCATCTGTTGGGGTTTTC 57.271 39.130 0.00 0.00 38.44 2.29
2091 2967 5.147032 AGATTTCATCTGTTGGGGTTTTCA 58.853 37.500 0.00 0.00 38.44 2.69
2092 2968 5.781818 AGATTTCATCTGTTGGGGTTTTCAT 59.218 36.000 0.00 0.00 38.44 2.57
2093 2969 6.953520 AGATTTCATCTGTTGGGGTTTTCATA 59.046 34.615 0.00 0.00 38.44 2.15
2094 2970 6.588719 TTTCATCTGTTGGGGTTTTCATAG 57.411 37.500 0.00 0.00 0.00 2.23
2095 2971 5.255397 TCATCTGTTGGGGTTTTCATAGT 57.745 39.130 0.00 0.00 0.00 2.12
2096 2972 5.640147 TCATCTGTTGGGGTTTTCATAGTT 58.360 37.500 0.00 0.00 0.00 2.24
2097 2973 6.785076 TCATCTGTTGGGGTTTTCATAGTTA 58.215 36.000 0.00 0.00 0.00 2.24
2098 2974 6.884295 TCATCTGTTGGGGTTTTCATAGTTAG 59.116 38.462 0.00 0.00 0.00 2.34
2099 2975 6.195600 TCTGTTGGGGTTTTCATAGTTAGT 57.804 37.500 0.00 0.00 0.00 2.24
2100 2976 7.319052 TCTGTTGGGGTTTTCATAGTTAGTA 57.681 36.000 0.00 0.00 0.00 1.82
2101 2977 7.924541 TCTGTTGGGGTTTTCATAGTTAGTAT 58.075 34.615 0.00 0.00 0.00 2.12
2102 2978 7.827236 TCTGTTGGGGTTTTCATAGTTAGTATG 59.173 37.037 0.81 0.81 40.15 2.39
2103 2979 7.691213 TGTTGGGGTTTTCATAGTTAGTATGA 58.309 34.615 5.71 5.71 44.96 2.15
2104 2980 8.333235 TGTTGGGGTTTTCATAGTTAGTATGAT 58.667 33.333 10.19 0.00 45.74 2.45
2105 2981 8.621286 GTTGGGGTTTTCATAGTTAGTATGATG 58.379 37.037 10.19 0.00 45.74 3.07
2106 2982 7.867921 TGGGGTTTTCATAGTTAGTATGATGT 58.132 34.615 10.19 0.00 45.74 3.06
2107 2983 8.333235 TGGGGTTTTCATAGTTAGTATGATGTT 58.667 33.333 10.19 0.00 45.74 2.71
2108 2984 9.185680 GGGGTTTTCATAGTTAGTATGATGTTT 57.814 33.333 10.19 0.00 45.74 2.83
2119 2995 9.671279 AGTTAGTATGATGTTTGATGAATCACA 57.329 29.630 0.00 0.00 36.36 3.58
2120 2996 9.708222 GTTAGTATGATGTTTGATGAATCACAC 57.292 33.333 3.18 3.18 37.84 3.82
2121 2997 7.008440 AGTATGATGTTTGATGAATCACACG 57.992 36.000 5.40 0.00 39.65 4.49
2122 2998 6.818142 AGTATGATGTTTGATGAATCACACGA 59.182 34.615 5.40 0.00 39.65 4.35
2123 2999 6.688637 ATGATGTTTGATGAATCACACGAT 57.311 33.333 5.40 1.52 39.65 3.73
2124 3000 7.790823 ATGATGTTTGATGAATCACACGATA 57.209 32.000 5.40 0.00 39.65 2.92
2125 3001 7.237920 TGATGTTTGATGAATCACACGATAG 57.762 36.000 5.40 0.00 39.65 2.08
2126 3002 6.258507 TGATGTTTGATGAATCACACGATAGG 59.741 38.462 5.40 0.00 39.65 2.57
2127 3003 5.729510 TGTTTGATGAATCACACGATAGGA 58.270 37.500 5.40 0.00 39.65 2.94
2128 3004 6.348498 TGTTTGATGAATCACACGATAGGAT 58.652 36.000 5.40 0.00 39.65 3.24
2129 3005 7.496747 TGTTTGATGAATCACACGATAGGATA 58.503 34.615 5.40 0.00 39.65 2.59
2130 3006 7.438160 TGTTTGATGAATCACACGATAGGATAC 59.562 37.037 5.40 0.00 39.65 2.24
2131 3007 6.648879 TGATGAATCACACGATAGGATACA 57.351 37.500 0.00 0.00 43.77 2.29
2132 3008 7.049799 TGATGAATCACACGATAGGATACAA 57.950 36.000 0.00 0.00 43.77 2.41
2133 3009 7.670364 TGATGAATCACACGATAGGATACAAT 58.330 34.615 0.00 0.00 43.77 2.71
2134 3010 8.150296 TGATGAATCACACGATAGGATACAATT 58.850 33.333 0.00 0.00 43.77 2.32
2135 3011 9.639601 GATGAATCACACGATAGGATACAATTA 57.360 33.333 0.00 0.00 43.77 1.40
2137 3013 9.423061 TGAATCACACGATAGGATACAATTATG 57.577 33.333 0.00 0.00 43.77 1.90
2138 3014 8.777865 AATCACACGATAGGATACAATTATGG 57.222 34.615 0.00 0.00 43.77 2.74
2139 3015 6.163476 TCACACGATAGGATACAATTATGGC 58.837 40.000 0.00 0.00 43.77 4.40
2140 3016 5.931724 CACACGATAGGATACAATTATGGCA 59.068 40.000 0.00 0.00 43.77 4.92
2141 3017 6.091305 CACACGATAGGATACAATTATGGCAG 59.909 42.308 0.00 0.00 43.77 4.85
2142 3018 6.014584 ACACGATAGGATACAATTATGGCAGA 60.015 38.462 0.00 0.00 43.77 4.26
2143 3019 7.044181 CACGATAGGATACAATTATGGCAGAT 58.956 38.462 0.00 0.00 43.77 2.90
2144 3020 7.550551 CACGATAGGATACAATTATGGCAGATT 59.449 37.037 0.00 0.00 43.77 2.40
2145 3021 8.103305 ACGATAGGATACAATTATGGCAGATTT 58.897 33.333 0.00 0.00 43.77 2.17
2146 3022 8.607459 CGATAGGATACAATTATGGCAGATTTC 58.393 37.037 0.00 0.00 41.41 2.17
2147 3023 9.453572 GATAGGATACAATTATGGCAGATTTCA 57.546 33.333 0.00 0.00 41.41 2.69
2148 3024 9.986157 ATAGGATACAATTATGGCAGATTTCAT 57.014 29.630 0.00 0.00 41.41 2.57
2149 3025 8.345724 AGGATACAATTATGGCAGATTTCATC 57.654 34.615 0.00 1.78 41.41 2.92
2150 3026 8.168725 AGGATACAATTATGGCAGATTTCATCT 58.831 33.333 0.00 0.00 38.97 2.90
2183 3228 8.821894 GTTTTCATAGTTAGATGCTAGACCTTG 58.178 37.037 0.00 0.00 0.00 3.61
2196 3241 3.933861 AGACCTTGTTGTCCTTCAAGT 57.066 42.857 0.00 0.00 39.25 3.16
2198 3243 4.200092 AGACCTTGTTGTCCTTCAAGTTC 58.800 43.478 0.00 0.00 39.25 3.01
2236 3281 8.286800 TGATTAACTGTTACCAAAATCACTTCG 58.713 33.333 10.19 0.00 30.59 3.79
2251 3296 7.913674 AATCACTTCGAAAAGCTCTAGAATT 57.086 32.000 0.00 0.00 35.81 2.17
2299 3345 9.447040 GTAACTTGTGTTTGGTAAAGAATTCTC 57.553 33.333 8.78 0.00 37.59 2.87
2320 3367 4.368315 TCGTGTCATGATAATGCTACCAC 58.632 43.478 0.00 0.00 0.00 4.16
2385 3432 6.015918 TGGCCCAATATAAAATATCACCTGG 58.984 40.000 0.00 0.00 0.00 4.45
2395 3442 5.653255 AAATATCACCTGGTTCCTATGCT 57.347 39.130 0.00 0.00 0.00 3.79
2435 3482 5.030874 ACTAAGCATTCGTTAAAGTGCAC 57.969 39.130 9.40 9.40 39.94 4.57
2441 3488 1.504359 TCGTTAAAGTGCACCTTCCG 58.496 50.000 14.63 12.86 31.27 4.30
2447 3494 0.744281 AAGTGCACCTTCCGGTTTTG 59.256 50.000 14.63 0.00 42.13 2.44
2449 3496 0.458260 GTGCACCTTCCGGTTTTGTT 59.542 50.000 5.22 0.00 42.13 2.83
2577 3624 5.697473 TGATTTTCTGATTAACCGTTGCA 57.303 34.783 0.00 0.00 0.00 4.08
2641 3688 7.405292 AGATCAGTTTTCCAATTGTCTATGGA 58.595 34.615 4.43 0.00 43.84 3.41
2842 3893 4.348168 AGGTACAACTCTCACAAATGGACT 59.652 41.667 0.00 0.00 0.00 3.85
3035 4086 1.989165 GTGATGTCTGTGAGAAGCGTC 59.011 52.381 0.00 0.00 0.00 5.19
3050 4101 1.687123 AGCGTCTGGACTTGTAAGTGT 59.313 47.619 1.35 0.00 39.88 3.55
3057 4108 5.234543 GTCTGGACTTGTAAGTGTTGAAGTC 59.765 44.000 1.35 0.00 42.34 3.01
3105 4160 5.106078 GGGAGCGAATACTTAGGTGATAGAG 60.106 48.000 0.00 0.00 0.00 2.43
3337 4392 4.944317 GCTGGCTTGTACTTCCTATTTTCT 59.056 41.667 0.00 0.00 0.00 2.52
3344 4399 7.822822 GCTTGTACTTCCTATTTTCTTAGTGGA 59.177 37.037 0.00 0.00 0.00 4.02
3400 4455 4.827789 TCTAGGCCCTATGGAACTTATGT 58.172 43.478 0.00 0.00 0.00 2.29
3592 4651 2.967887 AGAAGGCATTATTTCCCCATGC 59.032 45.455 0.00 0.00 42.26 4.06
3602 4661 0.468226 TTCCCCATGCGACATAGTCC 59.532 55.000 0.00 0.00 0.00 3.85
3603 4662 1.071471 CCCCATGCGACATAGTCCC 59.929 63.158 0.00 0.00 0.00 4.46
3604 4663 1.695114 CCCCATGCGACATAGTCCCA 61.695 60.000 0.00 0.00 0.00 4.37
3606 4665 0.465705 CCATGCGACATAGTCCCACT 59.534 55.000 0.00 0.00 0.00 4.00
3675 4739 7.776933 TGAGAGTTTCCTCATATGAATTTCG 57.223 36.000 6.90 0.00 40.40 3.46
3686 4750 3.951979 ATGAATTTCGGTCAGCGAATC 57.048 42.857 13.32 9.03 0.00 2.52
3772 4842 5.129320 TCTGATATGCATATCCTTGCCGTAT 59.871 40.000 33.53 7.02 42.06 3.06
3773 4843 6.323739 TCTGATATGCATATCCTTGCCGTATA 59.676 38.462 33.53 16.45 42.06 1.47
3782 4852 3.602483 TCCTTGCCGTATAACTGGAAAC 58.398 45.455 0.00 0.00 0.00 2.78
3849 4919 2.534042 TTTGGGACCTTGAAACCACA 57.466 45.000 0.00 0.00 31.65 4.17
3873 4943 4.407296 TGGTGTTTCCTGTGGCTTTTATTT 59.593 37.500 0.00 0.00 37.07 1.40
3895 4965 8.865590 ATTTCATTTTGCTTGTTTAGTTACGT 57.134 26.923 0.00 0.00 0.00 3.57
3915 4985 4.095782 ACGTGGTGTTGCATATAATGGTTC 59.904 41.667 0.00 0.00 0.00 3.62
3936 5006 7.888021 TGGTTCACATACAAACCTGATAGAATT 59.112 33.333 5.91 0.00 44.33 2.17
3940 5010 7.392953 TCACATACAAACCTGATAGAATTTGCA 59.607 33.333 0.00 0.00 35.83 4.08
3969 5044 3.498397 AGTTAGTCGTGGAAAACAGCATG 59.502 43.478 0.00 0.00 46.00 4.06
4096 5171 6.426646 AGTCATCTCTGGTCTGTAAAGTTT 57.573 37.500 0.00 0.00 0.00 2.66
4151 5228 4.398549 TTTGTAAATCGTTCGCTGAAGG 57.601 40.909 5.13 5.13 0.00 3.46
4152 5229 2.343101 TGTAAATCGTTCGCTGAAGGG 58.657 47.619 9.81 0.00 0.00 3.95
4153 5230 2.289195 TGTAAATCGTTCGCTGAAGGGT 60.289 45.455 9.81 2.29 0.00 4.34
4154 5231 1.892209 AAATCGTTCGCTGAAGGGTT 58.108 45.000 9.81 7.19 33.09 4.11
4155 5232 1.892209 AATCGTTCGCTGAAGGGTTT 58.108 45.000 9.81 4.08 28.21 3.27
4156 5233 1.156736 ATCGTTCGCTGAAGGGTTTG 58.843 50.000 9.81 0.00 0.00 2.93
4157 5234 0.105224 TCGTTCGCTGAAGGGTTTGA 59.895 50.000 9.81 0.00 0.00 2.69
4236 5313 0.033601 TTGGGCACGGCTAATGGAAT 60.034 50.000 0.00 0.00 0.00 3.01
4260 5337 1.020437 GCTGCTGTAAGGAAGATGCC 58.980 55.000 0.00 0.00 29.53 4.40
4395 5497 2.488204 TGAAATCAACGGGAGCATGA 57.512 45.000 0.00 0.00 34.19 3.07
4401 5503 1.831106 TCAACGGGAGCATGATGTACT 59.169 47.619 0.00 0.00 0.00 2.73
4402 5504 1.935873 CAACGGGAGCATGATGTACTG 59.064 52.381 0.00 0.00 0.00 2.74
4403 5505 0.179073 ACGGGAGCATGATGTACTGC 60.179 55.000 0.00 0.00 38.69 4.40
4404 5506 0.179076 CGGGAGCATGATGTACTGCA 60.179 55.000 7.48 0.00 40.88 4.41
4406 5508 1.407299 GGGAGCATGATGTACTGCACA 60.407 52.381 7.48 0.00 40.88 4.57
4441 5566 3.099905 TCCAGTAGAAGCATAGCACAGT 58.900 45.455 0.00 0.00 0.00 3.55
4459 5589 5.295950 CACAGTGGTGCAAAATCCATTTTA 58.704 37.500 0.00 0.00 36.91 1.52
4593 5729 6.429692 TGGATACATATTAAAACATCTGGCGG 59.570 38.462 0.00 0.00 46.17 6.13
4636 5773 1.513858 TTAGGGGAATGCCATACGGT 58.486 50.000 0.00 0.00 35.15 4.83
4637 5774 0.762418 TAGGGGAATGCCATACGGTG 59.238 55.000 0.00 0.00 35.15 4.94
4638 5775 1.226262 GGGGAATGCCATACGGTGT 59.774 57.895 0.00 0.00 35.15 4.16
4639 5776 0.818040 GGGGAATGCCATACGGTGTC 60.818 60.000 0.00 0.00 35.15 3.67
4640 5777 0.180406 GGGAATGCCATACGGTGTCT 59.820 55.000 0.00 0.00 35.15 3.41
4642 5779 1.670811 GGAATGCCATACGGTGTCTTG 59.329 52.381 0.00 0.00 33.28 3.02
4643 5780 1.064060 GAATGCCATACGGTGTCTTGC 59.936 52.381 0.00 0.00 33.28 4.01
4645 5782 0.250510 TGCCATACGGTGTCTTGCAA 60.251 50.000 0.00 0.00 33.28 4.08
4663 5924 7.110216 GTCTTGCAATGTTTATTAGCGTATTCG 59.890 37.037 0.00 0.00 40.37 3.34
4667 5928 8.126074 TGCAATGTTTATTAGCGTATTCGAATT 58.874 29.630 17.19 0.08 39.71 2.17
4708 5970 2.362889 CCACCATGTTGGCCTCCC 60.363 66.667 3.32 0.00 42.67 4.30
4709 5971 2.362889 CACCATGTTGGCCTCCCC 60.363 66.667 3.32 0.00 42.67 4.81
4725 5987 1.193462 CCCCTGGGCAATGCTGAAAA 61.193 55.000 7.39 0.00 0.00 2.29
4729 5991 2.037511 CCTGGGCAATGCTGAAAAGAAA 59.962 45.455 4.82 0.00 0.00 2.52
4731 5993 2.224257 TGGGCAATGCTGAAAAGAAACC 60.224 45.455 4.82 0.00 0.00 3.27
4733 5995 3.557686 GGGCAATGCTGAAAAGAAACCAT 60.558 43.478 4.82 0.00 0.00 3.55
4755 6017 8.206189 ACCATACAAAATTTCAATGATCCCATC 58.794 33.333 8.26 0.00 31.40 3.51
4756 6018 8.426489 CCATACAAAATTTCAATGATCCCATCT 58.574 33.333 8.26 0.00 31.40 2.90
4766 6050 9.489084 TTTCAATGATCCCATCTAATAGTAACG 57.511 33.333 0.00 0.00 31.40 3.18
4785 6069 4.749245 ACGTTCATCTTTCATTGACCAC 57.251 40.909 0.00 0.00 0.00 4.16
4805 6089 0.392998 GAGGCAGCCAAAAGATCCGA 60.393 55.000 15.80 0.00 0.00 4.55
4809 6093 2.599659 GCAGCCAAAAGATCCGAAAAG 58.400 47.619 0.00 0.00 0.00 2.27
4818 6102 3.643159 AGATCCGAAAAGGCAAAACAC 57.357 42.857 0.00 0.00 40.77 3.32
4830 6114 2.484889 GCAAAACACGGCCCAAAATAA 58.515 42.857 0.00 0.00 0.00 1.40
4832 6116 3.458189 CAAAACACGGCCCAAAATAACA 58.542 40.909 0.00 0.00 0.00 2.41
4838 6122 2.094957 ACGGCCCAAAATAACATGTTCG 60.095 45.455 15.85 11.36 0.00 3.95
4841 6125 3.444388 GGCCCAAAATAACATGTTCGGTA 59.556 43.478 15.85 0.00 0.00 4.02
4872 6156 7.417116 GCAAACCATCTCACCATGATTATTTCT 60.417 37.037 0.00 0.00 0.00 2.52
4909 6194 6.313519 TCAACACAGCTCTCCCTATTTAAT 57.686 37.500 0.00 0.00 0.00 1.40
4913 6198 7.631717 ACACAGCTCTCCCTATTTAATTTTC 57.368 36.000 0.00 0.00 0.00 2.29
5004 6290 2.977405 GTGCAACCTTGTAGAAGCAG 57.023 50.000 0.00 0.00 32.03 4.24
5017 6303 3.902881 AGAAGCAGGAACATAGACCAG 57.097 47.619 0.00 0.00 0.00 4.00
5038 6324 5.314529 CAGGGATCATAAATGTCATCAGCT 58.685 41.667 0.00 0.00 0.00 4.24
5040 6326 6.002704 AGGGATCATAAATGTCATCAGCTTC 58.997 40.000 0.00 0.00 0.00 3.86
5053 6339 4.635765 TCATCAGCTTCGGGTTAAAATCAG 59.364 41.667 0.00 0.00 0.00 2.90
5089 6375 3.323979 TCCCAACTCTTGAGAACCTACAC 59.676 47.826 4.49 0.00 0.00 2.90
5115 6401 1.347707 ACAGGATTTCCACTCGCTTGA 59.652 47.619 0.00 0.00 38.89 3.02
5121 6407 4.450419 GGATTTCCACTCGCTTGATAGATG 59.550 45.833 0.00 0.00 35.64 2.90
5141 6427 5.308237 AGATGCTCCCTCCGTTTCTAAATAT 59.692 40.000 0.00 0.00 0.00 1.28
5147 6433 7.059202 TCCCTCCGTTTCTAAATATAAGACC 57.941 40.000 0.00 0.00 0.00 3.85
5215 6515 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
5223 6523 6.041637 ACTCATTTTGCTCCGTATATAGTCCA 59.958 38.462 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.742831 TCCACTGCAAACTGTTGTGTC 59.257 47.619 0.00 0.00 37.06 3.67
1 2 1.832883 TCCACTGCAAACTGTTGTGT 58.167 45.000 0.00 0.00 37.06 3.72
4 5 2.023673 TCCTTCCACTGCAAACTGTTG 58.976 47.619 0.00 0.00 37.83 3.33
5 6 2.092429 TCTCCTTCCACTGCAAACTGTT 60.092 45.455 0.00 0.00 0.00 3.16
6 7 1.490490 TCTCCTTCCACTGCAAACTGT 59.510 47.619 0.00 0.00 0.00 3.55
7 8 2.149578 CTCTCCTTCCACTGCAAACTG 58.850 52.381 0.00 0.00 0.00 3.16
8 9 1.544314 GCTCTCCTTCCACTGCAAACT 60.544 52.381 0.00 0.00 0.00 2.66
9 10 0.877743 GCTCTCCTTCCACTGCAAAC 59.122 55.000 0.00 0.00 0.00 2.93
10 11 0.473755 TGCTCTCCTTCCACTGCAAA 59.526 50.000 0.00 0.00 0.00 3.68
11 12 0.694771 ATGCTCTCCTTCCACTGCAA 59.305 50.000 0.00 0.00 34.07 4.08
12 13 0.694771 AATGCTCTCCTTCCACTGCA 59.305 50.000 0.00 0.00 34.88 4.41
13 14 1.093159 CAATGCTCTCCTTCCACTGC 58.907 55.000 0.00 0.00 0.00 4.40
14 15 1.093159 GCAATGCTCTCCTTCCACTG 58.907 55.000 0.00 0.00 0.00 3.66
15 16 0.034670 GGCAATGCTCTCCTTCCACT 60.035 55.000 4.82 0.00 0.00 4.00
16 17 1.034292 GGGCAATGCTCTCCTTCCAC 61.034 60.000 4.82 0.00 0.00 4.02
17 18 1.304282 GGGCAATGCTCTCCTTCCA 59.696 57.895 4.82 0.00 0.00 3.53
23 24 0.743097 GTCCATTGGGCAATGCTCTC 59.257 55.000 6.67 0.00 45.06 3.20
34 35 0.245539 AGACCGTACGTGTCCATTGG 59.754 55.000 24.12 0.00 33.09 3.16
44 45 1.679977 TCCCCAAGGAGACCGTACG 60.680 63.158 8.69 8.69 37.19 3.67
53 54 2.251818 GATCGATGATCTCCCCAAGGA 58.748 52.381 0.54 0.00 41.31 3.36
55 56 1.889170 TCGATCGATGATCTCCCCAAG 59.111 52.381 15.15 0.00 36.96 3.61
56 57 1.995376 TCGATCGATGATCTCCCCAA 58.005 50.000 15.15 0.00 36.96 4.12
57 58 2.095461 GATCGATCGATGATCTCCCCA 58.905 52.381 33.86 0.75 39.30 4.96
85 98 2.355986 CGTGGTGGATCCTTCCCGA 61.356 63.158 14.23 0.00 41.83 5.14
106 119 4.275508 CGATCCCATGGGCCAGGG 62.276 72.222 29.97 29.97 46.90 4.45
138 151 2.105466 GCTCGCTCTTTCTGGCTGG 61.105 63.158 0.00 0.00 0.00 4.85
139 152 2.451167 CGCTCGCTCTTTCTGGCTG 61.451 63.158 0.00 0.00 0.00 4.85
140 153 1.954362 ATCGCTCGCTCTTTCTGGCT 61.954 55.000 0.00 0.00 0.00 4.75
141 154 1.486644 GATCGCTCGCTCTTTCTGGC 61.487 60.000 0.00 0.00 0.00 4.85
145 158 1.203600 GGTCGATCGCTCGCTCTTTC 61.204 60.000 11.09 0.00 44.65 2.62
146 159 1.226717 GGTCGATCGCTCGCTCTTT 60.227 57.895 11.09 0.00 44.65 2.52
147 160 2.409651 GGTCGATCGCTCGCTCTT 59.590 61.111 11.09 0.00 44.65 2.85
151 164 2.797439 GATCGGTCGATCGCTCGC 60.797 66.667 14.58 0.00 44.65 5.03
161 174 1.012234 GCAAACGCATCGATCGGTC 60.012 57.895 16.41 3.76 0.00 4.79
162 175 2.461110 GGCAAACGCATCGATCGGT 61.461 57.895 16.41 4.70 0.00 4.69
163 176 2.324477 GGCAAACGCATCGATCGG 59.676 61.111 16.41 0.48 0.00 4.18
164 177 1.011904 CTGGCAAACGCATCGATCG 60.012 57.895 9.36 9.36 0.00 3.69
165 178 1.089481 TCCTGGCAAACGCATCGATC 61.089 55.000 0.00 0.00 0.00 3.69
166 179 0.676466 TTCCTGGCAAACGCATCGAT 60.676 50.000 0.00 0.00 0.00 3.59
167 180 0.676466 ATTCCTGGCAAACGCATCGA 60.676 50.000 0.00 0.00 0.00 3.59
168 181 0.523968 CATTCCTGGCAAACGCATCG 60.524 55.000 0.00 0.00 0.00 3.84
169 182 0.810648 TCATTCCTGGCAAACGCATC 59.189 50.000 0.00 0.00 0.00 3.91
170 183 1.135527 CATCATTCCTGGCAAACGCAT 59.864 47.619 0.00 0.00 0.00 4.73
171 184 0.527113 CATCATTCCTGGCAAACGCA 59.473 50.000 0.00 0.00 0.00 5.24
172 185 0.810648 TCATCATTCCTGGCAAACGC 59.189 50.000 0.00 0.00 0.00 4.84
173 186 1.202222 GCTCATCATTCCTGGCAAACG 60.202 52.381 0.00 0.00 0.00 3.60
174 187 1.820519 TGCTCATCATTCCTGGCAAAC 59.179 47.619 0.00 0.00 0.00 2.93
179 192 0.379669 GCGTTGCTCATCATTCCTGG 59.620 55.000 0.00 0.00 0.00 4.45
207 220 4.943591 CAGTGTGCGTGCGTGTGC 62.944 66.667 0.00 0.00 43.20 4.57
218 231 2.509336 GATCCGCCCGACAGTGTG 60.509 66.667 0.00 0.00 0.00 3.82
219 232 3.771160 GGATCCGCCCGACAGTGT 61.771 66.667 0.00 0.00 0.00 3.55
227 240 2.516225 CTTTTCCCGGATCCGCCC 60.516 66.667 29.12 0.00 38.24 6.13
252 265 0.465097 AGCTTCCGGATCTTGCATGG 60.465 55.000 4.15 0.00 0.00 3.66
253 266 0.942962 GAGCTTCCGGATCTTGCATG 59.057 55.000 4.15 0.00 0.00 4.06
269 282 6.255596 TCCTTGATATACACGAGTATGAGC 57.744 41.667 14.77 5.49 41.00 4.26
277 290 6.549736 TCCTCTTGAATCCTTGATATACACGA 59.450 38.462 0.00 0.00 0.00 4.35
279 292 8.964476 TTTCCTCTTGAATCCTTGATATACAC 57.036 34.615 0.00 0.00 31.67 2.90
312 325 3.063485 GTTGGTGCAGAGAGACTTCTTC 58.937 50.000 0.00 0.00 32.53 2.87
313 326 2.435805 TGTTGGTGCAGAGAGACTTCTT 59.564 45.455 0.00 0.00 32.53 2.52
314 327 2.042464 TGTTGGTGCAGAGAGACTTCT 58.958 47.619 0.00 0.00 36.01 2.85
315 328 2.533266 TGTTGGTGCAGAGAGACTTC 57.467 50.000 0.00 0.00 0.00 3.01
316 329 2.369860 TGATGTTGGTGCAGAGAGACTT 59.630 45.455 0.00 0.00 0.00 3.01
317 330 1.973515 TGATGTTGGTGCAGAGAGACT 59.026 47.619 0.00 0.00 0.00 3.24
318 331 2.072298 GTGATGTTGGTGCAGAGAGAC 58.928 52.381 0.00 0.00 0.00 3.36
319 332 1.693606 TGTGATGTTGGTGCAGAGAGA 59.306 47.619 0.00 0.00 0.00 3.10
320 333 2.174363 TGTGATGTTGGTGCAGAGAG 57.826 50.000 0.00 0.00 0.00 3.20
322 335 2.094906 CCAATGTGATGTTGGTGCAGAG 60.095 50.000 0.00 0.00 40.94 3.35
323 336 1.887854 CCAATGTGATGTTGGTGCAGA 59.112 47.619 0.00 0.00 40.94 4.26
325 338 0.317799 GCCAATGTGATGTTGGTGCA 59.682 50.000 6.74 0.00 46.21 4.57
326 339 0.390209 GGCCAATGTGATGTTGGTGC 60.390 55.000 0.00 0.00 46.21 5.01
327 340 1.203052 GAGGCCAATGTGATGTTGGTG 59.797 52.381 5.01 0.00 46.21 4.17
328 341 1.076024 AGAGGCCAATGTGATGTTGGT 59.924 47.619 5.01 0.00 46.21 3.67
330 343 2.422479 CTGAGAGGCCAATGTGATGTTG 59.578 50.000 5.01 0.00 0.00 3.33
331 344 2.040813 ACTGAGAGGCCAATGTGATGTT 59.959 45.455 5.01 0.00 0.00 2.71
333 346 2.414994 ACTGAGAGGCCAATGTGATG 57.585 50.000 5.01 0.00 0.00 3.07
334 347 3.972638 AGATACTGAGAGGCCAATGTGAT 59.027 43.478 5.01 0.00 0.00 3.06
336 349 3.133542 TCAGATACTGAGAGGCCAATGTG 59.866 47.826 5.01 0.00 35.39 3.21
339 352 4.906664 AGAATCAGATACTGAGAGGCCAAT 59.093 41.667 5.01 0.00 44.08 3.16
340 353 4.100653 CAGAATCAGATACTGAGAGGCCAA 59.899 45.833 5.01 0.00 44.08 4.52
341 354 3.640498 CAGAATCAGATACTGAGAGGCCA 59.360 47.826 5.01 0.00 44.08 5.36
342 355 3.894427 TCAGAATCAGATACTGAGAGGCC 59.106 47.826 0.00 0.00 44.08 5.19
343 356 5.336690 GGATCAGAATCAGATACTGAGAGGC 60.337 48.000 7.50 0.00 44.08 4.70
345 358 5.106197 CGGGATCAGAATCAGATACTGAGAG 60.106 48.000 0.77 0.00 44.08 3.20
346 359 4.764308 CGGGATCAGAATCAGATACTGAGA 59.236 45.833 0.77 0.38 44.08 3.27
347 360 4.522405 ACGGGATCAGAATCAGATACTGAG 59.478 45.833 12.87 1.53 44.08 3.35
348 361 4.474394 ACGGGATCAGAATCAGATACTGA 58.526 43.478 12.87 3.95 44.99 3.41
349 362 4.522405 AGACGGGATCAGAATCAGATACTG 59.478 45.833 5.28 5.28 38.44 2.74
350 363 4.735369 AGACGGGATCAGAATCAGATACT 58.265 43.478 0.00 0.00 33.21 2.12
352 365 3.753797 CGAGACGGGATCAGAATCAGATA 59.246 47.826 0.00 0.00 33.21 1.98
353 366 2.556189 CGAGACGGGATCAGAATCAGAT 59.444 50.000 0.00 0.00 33.21 2.90
354 367 1.950216 CGAGACGGGATCAGAATCAGA 59.050 52.381 0.00 0.00 33.21 3.27
355 368 1.678627 ACGAGACGGGATCAGAATCAG 59.321 52.381 0.00 0.00 33.21 2.90
356 369 1.676529 GACGAGACGGGATCAGAATCA 59.323 52.381 0.00 0.00 33.21 2.57
357 370 1.334239 CGACGAGACGGGATCAGAATC 60.334 57.143 0.00 0.00 0.00 2.52
358 371 0.663688 CGACGAGACGGGATCAGAAT 59.336 55.000 0.00 0.00 0.00 2.40
359 372 0.392060 TCGACGAGACGGGATCAGAA 60.392 55.000 0.00 0.00 0.00 3.02
360 373 1.088340 GTCGACGAGACGGGATCAGA 61.088 60.000 0.00 0.00 40.43 3.27
361 374 1.352404 GTCGACGAGACGGGATCAG 59.648 63.158 0.00 0.00 40.43 2.90
362 375 3.494378 GTCGACGAGACGGGATCA 58.506 61.111 0.00 0.00 40.43 2.92
389 402 2.969238 CATGCTCCATCGGTCGCC 60.969 66.667 0.00 0.00 0.00 5.54
390 403 2.969238 CCATGCTCCATCGGTCGC 60.969 66.667 0.00 0.00 0.00 5.19
391 404 2.969238 GCCATGCTCCATCGGTCG 60.969 66.667 0.00 0.00 0.00 4.79
392 405 2.969238 CGCCATGCTCCATCGGTC 60.969 66.667 0.00 0.00 0.00 4.79
393 406 3.469970 TCGCCATGCTCCATCGGT 61.470 61.111 0.00 0.00 0.00 4.69
394 407 2.969238 GTCGCCATGCTCCATCGG 60.969 66.667 0.00 0.00 0.00 4.18
395 408 3.333189 CGTCGCCATGCTCCATCG 61.333 66.667 0.00 0.00 0.00 3.84
396 409 2.969238 CCGTCGCCATGCTCCATC 60.969 66.667 0.00 0.00 0.00 3.51
430 443 2.347731 GCCACCCGTTTGTTTCAAAAA 58.652 42.857 0.00 0.00 0.00 1.94
431 444 1.736032 CGCCACCCGTTTGTTTCAAAA 60.736 47.619 0.00 0.00 0.00 2.44
443 456 2.040009 ATATCCCAGAACGCCACCCG 62.040 60.000 0.00 0.00 44.21 5.28
444 457 1.053424 TATATCCCAGAACGCCACCC 58.947 55.000 0.00 0.00 0.00 4.61
445 458 1.692519 AGTATATCCCAGAACGCCACC 59.307 52.381 0.00 0.00 0.00 4.61
446 459 4.495422 CATAGTATATCCCAGAACGCCAC 58.505 47.826 0.00 0.00 0.00 5.01
447 460 3.056107 GCATAGTATATCCCAGAACGCCA 60.056 47.826 0.00 0.00 0.00 5.69
448 461 3.522553 GCATAGTATATCCCAGAACGCC 58.477 50.000 0.00 0.00 0.00 5.68
449 462 3.522553 GGCATAGTATATCCCAGAACGC 58.477 50.000 0.00 0.00 0.00 4.84
450 463 3.428999 CGGGCATAGTATATCCCAGAACG 60.429 52.174 15.97 0.00 38.68 3.95
451 464 3.118738 CCGGGCATAGTATATCCCAGAAC 60.119 52.174 15.97 0.00 38.68 3.01
452 465 3.104512 CCGGGCATAGTATATCCCAGAA 58.895 50.000 15.97 0.00 38.68 3.02
453 466 2.747177 CCGGGCATAGTATATCCCAGA 58.253 52.381 15.97 0.00 38.68 3.86
454 467 1.139058 GCCGGGCATAGTATATCCCAG 59.861 57.143 15.62 8.65 38.68 4.45
455 468 1.200519 GCCGGGCATAGTATATCCCA 58.799 55.000 15.62 0.00 38.68 4.37
456 469 1.497161 AGCCGGGCATAGTATATCCC 58.503 55.000 23.09 8.83 35.42 3.85
457 470 2.766828 AGAAGCCGGGCATAGTATATCC 59.233 50.000 23.09 0.00 0.00 2.59
458 471 3.447586 TGAGAAGCCGGGCATAGTATATC 59.552 47.826 23.09 7.76 0.00 1.63
459 472 3.441101 TGAGAAGCCGGGCATAGTATAT 58.559 45.455 23.09 0.00 0.00 0.86
460 473 2.884320 TGAGAAGCCGGGCATAGTATA 58.116 47.619 23.09 0.00 0.00 1.47
461 474 1.717032 TGAGAAGCCGGGCATAGTAT 58.283 50.000 23.09 0.00 0.00 2.12
462 475 1.491668 TTGAGAAGCCGGGCATAGTA 58.508 50.000 23.09 1.16 0.00 1.82
463 476 0.618458 TTTGAGAAGCCGGGCATAGT 59.382 50.000 23.09 2.70 0.00 2.12
464 477 1.876156 GATTTGAGAAGCCGGGCATAG 59.124 52.381 23.09 0.00 0.00 2.23
465 478 1.490490 AGATTTGAGAAGCCGGGCATA 59.510 47.619 23.09 0.00 0.00 3.14
466 479 0.257039 AGATTTGAGAAGCCGGGCAT 59.743 50.000 23.09 9.75 0.00 4.40
467 480 0.392998 GAGATTTGAGAAGCCGGGCA 60.393 55.000 23.09 0.00 0.00 5.36
472 485 3.486542 GCACGATTGAGATTTGAGAAGCC 60.487 47.826 0.00 0.00 0.00 4.35
474 487 4.391216 ACTGCACGATTGAGATTTGAGAAG 59.609 41.667 0.00 0.00 0.00 2.85
475 488 4.318332 ACTGCACGATTGAGATTTGAGAA 58.682 39.130 0.00 0.00 0.00 2.87
494 507 1.654954 CCTGACCCGAGGACGTACTG 61.655 65.000 4.10 0.00 34.69 2.74
497 510 1.377725 GACCTGACCCGAGGACGTA 60.378 63.158 0.00 0.00 36.51 3.57
499 512 3.450115 GGACCTGACCCGAGGACG 61.450 72.222 0.00 0.00 36.51 4.79
501 514 1.685765 CATGGACCTGACCCGAGGA 60.686 63.158 0.00 0.00 36.51 3.71
506 519 2.614013 ACCCCATGGACCTGACCC 60.614 66.667 15.22 0.00 34.81 4.46
595 608 2.528743 GCACTGACATGCCGATCCG 61.529 63.158 0.00 0.00 39.86 4.18
597 610 1.019673 AATGCACTGACATGCCGATC 58.980 50.000 0.00 0.00 45.50 3.69
598 611 1.133598 CAAATGCACTGACATGCCGAT 59.866 47.619 0.00 0.00 45.50 4.18
599 612 0.522626 CAAATGCACTGACATGCCGA 59.477 50.000 0.00 0.00 45.50 5.54
600 613 0.241749 ACAAATGCACTGACATGCCG 59.758 50.000 4.68 0.00 45.50 5.69
601 614 1.542915 AGACAAATGCACTGACATGCC 59.457 47.619 4.68 0.00 45.50 4.40
602 615 2.592194 CAGACAAATGCACTGACATGC 58.408 47.619 4.68 3.71 46.32 4.06
604 617 3.720223 GGGCAGACAAATGCACTGACAT 61.720 50.000 9.14 0.00 46.41 3.06
605 618 2.423628 GGGCAGACAAATGCACTGACA 61.424 52.381 9.14 0.00 46.41 3.58
606 619 0.242017 GGGCAGACAAATGCACTGAC 59.758 55.000 5.51 2.08 46.41 3.51
636 920 3.243704 GGGCAGTTGCTCAAACAAATACA 60.244 43.478 3.88 0.00 42.27 2.29
637 921 3.005791 AGGGCAGTTGCTCAAACAAATAC 59.994 43.478 6.77 0.00 46.01 1.89
643 927 1.322442 AAGAGGGCAGTTGCTCAAAC 58.678 50.000 6.77 0.00 46.01 2.93
644 928 2.071778 AAAGAGGGCAGTTGCTCAAA 57.928 45.000 6.77 0.00 46.01 2.69
697 981 5.278660 GCTTTGGTGGATCATTAATAGCCTG 60.279 44.000 0.00 0.00 0.00 4.85
705 989 2.358090 CCTGGGCTTTGGTGGATCATTA 60.358 50.000 0.00 0.00 0.00 1.90
819 1103 8.899771 TGTTCTGGAGAAAAAGTAAACCTTTAG 58.100 33.333 0.00 0.00 42.62 1.85
820 1104 8.810990 TGTTCTGGAGAAAAAGTAAACCTTTA 57.189 30.769 0.00 0.00 42.62 1.85
821 1105 7.712204 TGTTCTGGAGAAAAAGTAAACCTTT 57.288 32.000 0.00 0.00 45.39 3.11
822 1106 7.014326 GGATGTTCTGGAGAAAAAGTAAACCTT 59.986 37.037 0.00 0.00 35.58 3.50
829 1144 4.275936 CGTTGGATGTTCTGGAGAAAAAGT 59.724 41.667 0.00 0.00 35.58 2.66
830 1145 4.275936 ACGTTGGATGTTCTGGAGAAAAAG 59.724 41.667 0.00 0.00 35.58 2.27
845 1160 0.402504 TTGGGTTAGGCACGTTGGAT 59.597 50.000 0.00 0.00 0.00 3.41
846 1161 0.535553 GTTGGGTTAGGCACGTTGGA 60.536 55.000 0.00 0.00 0.00 3.53
866 1181 4.112341 GTCGGTCGGTCTGGTCGG 62.112 72.222 0.00 0.00 0.00 4.79
910 1689 1.813728 GAGACGACGGGAAGGTGGTT 61.814 60.000 0.00 0.00 0.00 3.67
911 1690 2.203596 AGACGACGGGAAGGTGGT 60.204 61.111 0.00 0.00 0.00 4.16
912 1691 2.572284 GAGACGACGGGAAGGTGG 59.428 66.667 0.00 0.00 0.00 4.61
913 1692 2.572284 GGAGACGACGGGAAGGTG 59.428 66.667 0.00 0.00 0.00 4.00
914 1693 2.679287 GGGAGACGACGGGAAGGT 60.679 66.667 0.00 0.00 0.00 3.50
964 1743 4.157120 GATGGTGGTCGGGTCGGG 62.157 72.222 0.00 0.00 0.00 5.14
965 1744 4.157120 GGATGGTGGTCGGGTCGG 62.157 72.222 0.00 0.00 0.00 4.79
966 1745 4.157120 GGGATGGTGGTCGGGTCG 62.157 72.222 0.00 0.00 0.00 4.79
974 1753 1.000359 GAGGGTTTGGGGATGGTGG 60.000 63.158 0.00 0.00 0.00 4.61
976 1755 3.087065 CGAGGGTTTGGGGATGGT 58.913 61.111 0.00 0.00 0.00 3.55
1092 1878 4.500116 GCAGGAGGCGAGTCCGAC 62.500 72.222 0.00 0.00 46.21 4.79
1207 1993 2.683933 ACGAAGCGGGTGAGGGAT 60.684 61.111 0.00 0.00 0.00 3.85
1218 2004 3.736252 ACTGCATATCGAATACACGAAGC 59.264 43.478 0.00 0.00 45.16 3.86
1220 2006 4.915667 GCTACTGCATATCGAATACACGAA 59.084 41.667 0.00 0.00 41.27 3.85
1343 2129 1.831389 CGCATAATTCGTCTGCCCCG 61.831 60.000 0.00 0.00 32.24 5.73
1347 2133 0.588252 ATGCCGCATAATTCGTCTGC 59.412 50.000 3.36 0.00 0.00 4.26
1362 2148 2.356135 ACACCACTTACGAATGATGCC 58.644 47.619 0.00 0.00 0.00 4.40
1391 2178 5.224821 TGAGCATTCTAGCAGCTATTCAT 57.775 39.130 1.54 0.00 39.02 2.57
1433 2295 0.385974 GCACACATTTGCCGTCACTC 60.386 55.000 0.00 0.00 36.42 3.51
1463 2325 5.530915 AGAACAGATGAAACGTTCCAAATGA 59.469 36.000 0.00 0.00 39.89 2.57
1478 2340 2.084844 GCACGGAGCAGAACAGATG 58.915 57.895 0.00 0.00 44.79 2.90
1518 2380 7.384660 GTCAAATCTGCCTCTCATAAGTCATAG 59.615 40.741 0.00 0.00 0.00 2.23
1539 2401 1.270839 GGCCTGCACACTCTAGTCAAA 60.271 52.381 0.00 0.00 0.00 2.69
1687 2549 7.771826 ACAGCCTGTAACTTAGTGTTAAGAAAA 59.228 33.333 0.00 0.00 42.12 2.29
1688 2550 7.225931 CACAGCCTGTAACTTAGTGTTAAGAAA 59.774 37.037 0.00 0.00 42.12 2.52
1689 2551 6.704493 CACAGCCTGTAACTTAGTGTTAAGAA 59.296 38.462 0.00 0.00 42.12 2.52
1690 2552 6.183360 ACACAGCCTGTAACTTAGTGTTAAGA 60.183 38.462 0.00 0.00 42.12 2.10
1691 2553 5.989777 ACACAGCCTGTAACTTAGTGTTAAG 59.010 40.000 0.00 0.00 42.12 1.85
1692 2554 5.920903 ACACAGCCTGTAACTTAGTGTTAA 58.079 37.500 0.00 0.00 42.12 2.01
1693 2555 5.540400 ACACAGCCTGTAACTTAGTGTTA 57.460 39.130 0.00 0.00 39.89 2.41
1694 2556 4.417426 ACACAGCCTGTAACTTAGTGTT 57.583 40.909 0.00 0.00 42.31 3.32
1695 2557 5.540400 TTACACAGCCTGTAACTTAGTGT 57.460 39.130 0.00 0.00 39.93 3.55
1696 2558 6.311445 CAGATTACACAGCCTGTAACTTAGTG 59.689 42.308 0.00 0.00 46.08 2.74
1697 2559 6.210784 TCAGATTACACAGCCTGTAACTTAGT 59.789 38.462 0.00 0.00 46.08 2.24
1707 2569 5.994250 ACACATTATCAGATTACACAGCCT 58.006 37.500 0.00 0.00 0.00 4.58
1735 2597 0.317854 GAAAACGGCAGGCACAGTTC 60.318 55.000 0.00 0.00 0.00 3.01
1744 2606 3.058914 CAGTCAGGTTAAGAAAACGGCAG 60.059 47.826 0.00 0.00 0.00 4.85
1761 2623 2.682856 GAGCAAACCAACAAGACAGTCA 59.317 45.455 2.66 0.00 0.00 3.41
1769 2631 1.761449 TGAGCAGAGCAAACCAACAA 58.239 45.000 0.00 0.00 0.00 2.83
1773 2635 1.538047 GGAATGAGCAGAGCAAACCA 58.462 50.000 0.00 0.00 0.00 3.67
1780 2642 4.141756 ACTTAGTCATGGGAATGAGCAGAG 60.142 45.833 0.00 0.00 28.81 3.35
1798 2660 5.667539 TCTCTCAACCCTCATCAACTTAG 57.332 43.478 0.00 0.00 0.00 2.18
1828 2691 5.475564 ACTTTGTTACACGCCCAAATATTCT 59.524 36.000 0.00 0.00 0.00 2.40
1837 2700 2.920647 GCATTCACTTTGTTACACGCCC 60.921 50.000 0.00 0.00 0.00 6.13
1841 2704 4.739716 CACAAGGCATTCACTTTGTTACAC 59.260 41.667 0.00 0.00 0.00 2.90
1848 2711 3.795877 CCAAACACAAGGCATTCACTTT 58.204 40.909 0.00 0.00 0.00 2.66
2015 2891 6.061022 TCAAACATCATACAGGAGCCTTTA 57.939 37.500 0.00 0.00 0.00 1.85
2026 2902 7.003939 TCGTGTGATTCATCAAACATCATAC 57.996 36.000 10.18 0.00 43.65 2.39
2041 2917 7.334421 GCCATAATTGTATCCTATCGTGTGATT 59.666 37.037 0.00 0.00 35.99 2.57
2069 2945 5.467035 TGAAAACCCCAACAGATGAAATC 57.533 39.130 0.00 0.00 46.04 2.17
2078 2954 7.691213 TCATACTAACTATGAAAACCCCAACA 58.309 34.615 0.00 0.00 38.68 3.33
2093 2969 9.671279 TGTGATTCATCAAACATCATACTAACT 57.329 29.630 0.00 0.00 38.75 2.24
2094 2970 9.708222 GTGTGATTCATCAAACATCATACTAAC 57.292 33.333 5.37 0.00 43.11 2.34
2095 2971 8.603181 CGTGTGATTCATCAAACATCATACTAA 58.397 33.333 10.18 0.00 43.65 2.24
2096 2972 7.978975 TCGTGTGATTCATCAAACATCATACTA 59.021 33.333 10.18 0.00 43.65 1.82
2097 2973 6.818142 TCGTGTGATTCATCAAACATCATACT 59.182 34.615 10.18 0.00 43.65 2.12
2098 2974 7.003939 TCGTGTGATTCATCAAACATCATAC 57.996 36.000 10.18 0.00 43.65 2.39
2099 2975 7.790823 ATCGTGTGATTCATCAAACATCATA 57.209 32.000 10.18 0.00 43.65 2.15
2100 2976 6.688637 ATCGTGTGATTCATCAAACATCAT 57.311 33.333 10.18 0.00 43.65 2.45
2101 2977 6.258507 CCTATCGTGTGATTCATCAAACATCA 59.741 38.462 10.18 0.00 43.65 3.07
2102 2978 6.479990 TCCTATCGTGTGATTCATCAAACATC 59.520 38.462 10.18 0.00 43.65 3.06
2103 2979 6.348498 TCCTATCGTGTGATTCATCAAACAT 58.652 36.000 10.18 5.88 43.65 2.71
2104 2980 5.729510 TCCTATCGTGTGATTCATCAAACA 58.270 37.500 10.18 0.00 43.65 2.83
2105 2981 6.851222 ATCCTATCGTGTGATTCATCAAAC 57.149 37.500 0.46 0.46 40.78 2.93
2106 2982 7.496747 TGTATCCTATCGTGTGATTCATCAAA 58.503 34.615 0.00 0.00 38.75 2.69
2107 2983 7.049799 TGTATCCTATCGTGTGATTCATCAA 57.950 36.000 0.00 0.00 38.75 2.57
2108 2984 6.648879 TGTATCCTATCGTGTGATTCATCA 57.351 37.500 0.00 0.00 35.99 3.07
2109 2985 8.539770 AATTGTATCCTATCGTGTGATTCATC 57.460 34.615 0.00 0.00 35.99 2.92
2111 2987 9.423061 CATAATTGTATCCTATCGTGTGATTCA 57.577 33.333 0.00 0.00 35.99 2.57
2112 2988 8.873830 CCATAATTGTATCCTATCGTGTGATTC 58.126 37.037 0.00 0.00 35.99 2.52
2113 2989 7.334421 GCCATAATTGTATCCTATCGTGTGATT 59.666 37.037 0.00 0.00 35.99 2.57
2114 2990 6.818644 GCCATAATTGTATCCTATCGTGTGAT 59.181 38.462 0.00 0.00 38.67 3.06
2115 2991 6.163476 GCCATAATTGTATCCTATCGTGTGA 58.837 40.000 0.00 0.00 0.00 3.58
2116 2992 5.931724 TGCCATAATTGTATCCTATCGTGTG 59.068 40.000 0.00 0.00 0.00 3.82
2117 2993 6.014584 TCTGCCATAATTGTATCCTATCGTGT 60.015 38.462 0.00 0.00 0.00 4.49
2118 2994 6.398095 TCTGCCATAATTGTATCCTATCGTG 58.602 40.000 0.00 0.00 0.00 4.35
2119 2995 6.605471 TCTGCCATAATTGTATCCTATCGT 57.395 37.500 0.00 0.00 0.00 3.73
2120 2996 8.498054 AAATCTGCCATAATTGTATCCTATCG 57.502 34.615 0.00 0.00 0.00 2.92
2121 2997 9.453572 TGAAATCTGCCATAATTGTATCCTATC 57.546 33.333 0.00 0.00 0.00 2.08
2122 2998 9.986157 ATGAAATCTGCCATAATTGTATCCTAT 57.014 29.630 0.00 0.00 0.00 2.57
2123 2999 9.453572 GATGAAATCTGCCATAATTGTATCCTA 57.546 33.333 0.00 0.00 41.17 2.94
2124 3000 8.345724 GATGAAATCTGCCATAATTGTATCCT 57.654 34.615 0.00 0.00 41.17 3.24
2141 3017 8.299570 ACTATGAAAACCACAACAGATGAAATC 58.700 33.333 0.00 0.00 46.04 2.17
2142 3018 8.181904 ACTATGAAAACCACAACAGATGAAAT 57.818 30.769 0.00 0.00 0.00 2.17
2143 3019 7.581213 ACTATGAAAACCACAACAGATGAAA 57.419 32.000 0.00 0.00 0.00 2.69
2144 3020 7.581213 AACTATGAAAACCACAACAGATGAA 57.419 32.000 0.00 0.00 0.00 2.57
2145 3021 8.154203 TCTAACTATGAAAACCACAACAGATGA 58.846 33.333 0.00 0.00 0.00 2.92
2146 3022 8.322906 TCTAACTATGAAAACCACAACAGATG 57.677 34.615 0.00 0.00 0.00 2.90
2147 3023 8.950210 CATCTAACTATGAAAACCACAACAGAT 58.050 33.333 0.00 0.00 0.00 2.90
2148 3024 7.094805 GCATCTAACTATGAAAACCACAACAGA 60.095 37.037 0.00 0.00 0.00 3.41
2149 3025 7.023575 GCATCTAACTATGAAAACCACAACAG 58.976 38.462 0.00 0.00 0.00 3.16
2150 3026 6.714810 AGCATCTAACTATGAAAACCACAACA 59.285 34.615 0.00 0.00 0.00 3.33
2151 3027 7.145932 AGCATCTAACTATGAAAACCACAAC 57.854 36.000 0.00 0.00 0.00 3.32
2152 3028 8.318412 TCTAGCATCTAACTATGAAAACCACAA 58.682 33.333 0.00 0.00 0.00 3.33
2153 3029 7.764443 GTCTAGCATCTAACTATGAAAACCACA 59.236 37.037 0.00 0.00 0.00 4.17
2154 3030 7.224949 GGTCTAGCATCTAACTATGAAAACCAC 59.775 40.741 0.00 0.00 0.00 4.16
2183 3228 9.880064 GAAAGTAATTAGAACTTGAAGGACAAC 57.120 33.333 0.00 0.00 37.26 3.32
2219 3264 6.206498 AGCTTTTCGAAGTGATTTTGGTAAC 58.794 36.000 0.00 0.00 0.00 2.50
2223 3268 5.113502 AGAGCTTTTCGAAGTGATTTTGG 57.886 39.130 0.00 0.00 0.00 3.28
2227 3272 7.389053 ACAATTCTAGAGCTTTTCGAAGTGATT 59.611 33.333 17.22 1.18 34.79 2.57
2229 3274 6.223852 ACAATTCTAGAGCTTTTCGAAGTGA 58.776 36.000 17.22 0.00 34.79 3.41
2236 3281 6.743575 TGCCTAACAATTCTAGAGCTTTTC 57.256 37.500 0.00 0.00 0.00 2.29
2251 3296 1.347378 TGCTCAGTGACATGCCTAACA 59.653 47.619 0.00 0.00 0.00 2.41
2299 3345 3.494626 GGTGGTAGCATTATCATGACACG 59.505 47.826 0.00 0.00 31.07 4.49
2320 3367 2.009774 CCGTTGTTCTATGCAAGGAGG 58.990 52.381 0.00 0.00 34.73 4.30
2395 3442 2.387757 AGTTCTTGCCCTGCTTTTCAA 58.612 42.857 0.00 0.00 0.00 2.69
2435 3482 5.457992 TTGAGTCTCAACAAAACCGGAAGG 61.458 45.833 9.46 0.00 44.35 3.46
2441 3488 6.861065 TCATACTTGAGTCTCAACAAAACC 57.139 37.500 11.36 0.00 32.21 3.27
2447 3494 7.658179 TCAAACATCATACTTGAGTCTCAAC 57.342 36.000 11.36 0.00 34.73 3.18
2449 3496 9.942850 TTAATCAAACATCATACTTGAGTCTCA 57.057 29.630 0.00 0.00 34.73 3.27
2577 3624 8.090831 GCTTCTTATTCTGTTCAAGGGATTTTT 58.909 33.333 0.00 0.00 0.00 1.94
2641 3688 3.148412 GCCAAGCCAAAATGAAATGGTT 58.852 40.909 0.00 0.00 39.00 3.67
2806 3857 7.017254 TGAGAGTTGTACCTAGAAGGGAAAAAT 59.983 37.037 0.00 0.00 40.58 1.82
2842 3893 2.139917 GTTGCAGAACGGATGTACACA 58.860 47.619 0.00 0.00 0.00 3.72
3035 4086 5.659048 GACTTCAACACTTACAAGTCCAG 57.341 43.478 0.00 0.00 39.15 3.86
3105 4160 2.362077 AGTTGATGAAACCTGCACCAAC 59.638 45.455 0.00 0.00 39.85 3.77
3337 4392 9.905713 AGATGCTACTTTATCATTTTCCACTAA 57.094 29.630 0.00 0.00 0.00 2.24
3368 4423 7.588866 TCCATAGGGCCTAGATGATTTAAAT 57.411 36.000 19.74 0.00 0.00 1.40
3400 4455 5.468409 TGTCAAAACGCTTCTTATCATGTGA 59.532 36.000 0.00 0.00 0.00 3.58
3578 4637 4.985538 ACTATGTCGCATGGGGAAATAAT 58.014 39.130 10.21 0.00 27.02 1.28
3592 4651 3.194968 ACCTTACAAGTGGGACTATGTCG 59.805 47.826 0.00 0.00 32.65 4.35
3602 4661 2.549754 CAGCAGTGAACCTTACAAGTGG 59.450 50.000 0.00 0.00 0.00 4.00
3603 4662 3.206150 ACAGCAGTGAACCTTACAAGTG 58.794 45.455 0.00 0.00 0.00 3.16
3604 4663 3.560636 ACAGCAGTGAACCTTACAAGT 57.439 42.857 0.00 0.00 0.00 3.16
3606 4665 4.587262 TCTCTACAGCAGTGAACCTTACAA 59.413 41.667 0.00 0.00 0.00 2.41
3686 4750 4.142600 GGCACACAGCTTATCCTAAAACAG 60.143 45.833 0.00 0.00 44.79 3.16
3712 4776 3.576982 TCCACTACTAGACACTGGGTTTG 59.423 47.826 0.00 0.00 0.00 2.93
3772 4842 5.362430 ACCAAGAGCAAAATGTTTCCAGTTA 59.638 36.000 0.00 0.00 0.00 2.24
3773 4843 4.162131 ACCAAGAGCAAAATGTTTCCAGTT 59.838 37.500 0.00 0.00 0.00 3.16
3782 4852 3.996150 AGTGACACCAAGAGCAAAATG 57.004 42.857 0.84 0.00 0.00 2.32
3849 4919 2.086610 AAAGCCACAGGAAACACCAT 57.913 45.000 0.00 0.00 42.04 3.55
3859 4929 6.790285 AGCAAAATGAAATAAAAGCCACAG 57.210 33.333 0.00 0.00 0.00 3.66
3860 4930 6.541641 ACAAGCAAAATGAAATAAAAGCCACA 59.458 30.769 0.00 0.00 0.00 4.17
3873 4943 6.183360 ACCACGTAACTAAACAAGCAAAATGA 60.183 34.615 0.00 0.00 0.00 2.57
3894 4964 5.105957 TGTGAACCATTATATGCAACACCAC 60.106 40.000 0.00 0.00 0.00 4.16
3895 4965 5.012893 TGTGAACCATTATATGCAACACCA 58.987 37.500 0.00 0.00 0.00 4.17
3915 4985 7.537715 TGCAAATTCTATCAGGTTTGTATGTG 58.462 34.615 0.00 0.00 34.82 3.21
3936 5006 4.021807 TCCACGACTAACTGTTCTATGCAA 60.022 41.667 0.00 0.00 0.00 4.08
3940 5010 6.518493 TGTTTTCCACGACTAACTGTTCTAT 58.482 36.000 0.00 0.00 0.00 1.98
3969 5044 4.946784 AGGTAACGATTCAAATCACAGC 57.053 40.909 3.81 0.00 46.39 4.40
4151 5228 6.202762 GTCATCAATTCAAACCCTTTCAAACC 59.797 38.462 0.00 0.00 0.00 3.27
4152 5229 6.074356 CGTCATCAATTCAAACCCTTTCAAAC 60.074 38.462 0.00 0.00 0.00 2.93
4153 5230 5.982516 CGTCATCAATTCAAACCCTTTCAAA 59.017 36.000 0.00 0.00 0.00 2.69
4154 5231 5.300539 TCGTCATCAATTCAAACCCTTTCAA 59.699 36.000 0.00 0.00 0.00 2.69
4155 5232 4.824537 TCGTCATCAATTCAAACCCTTTCA 59.175 37.500 0.00 0.00 0.00 2.69
4156 5233 5.371115 TCGTCATCAATTCAAACCCTTTC 57.629 39.130 0.00 0.00 0.00 2.62
4157 5234 4.321230 GCTCGTCATCAATTCAAACCCTTT 60.321 41.667 0.00 0.00 0.00 3.11
4236 5313 2.536066 TCTTCCTTACAGCAGCTACCA 58.464 47.619 0.00 0.00 0.00 3.25
4260 5337 1.332904 GCGAGTTGTTGTCAGGTTTCG 60.333 52.381 0.00 0.00 0.00 3.46
4401 5503 6.815089 ACTGGAACATAAAAGAAAATGTGCA 58.185 32.000 0.00 0.00 38.20 4.57
4402 5504 8.296713 TCTACTGGAACATAAAAGAAAATGTGC 58.703 33.333 0.00 0.00 38.20 4.57
4406 5508 9.077885 TGCTTCTACTGGAACATAAAAGAAAAT 57.922 29.630 0.00 0.00 38.20 1.82
4441 5566 7.055667 TGTTAGTAAAATGGATTTTGCACCA 57.944 32.000 13.29 0.00 42.39 4.17
4459 5589 4.216411 AGGCACGTTCCATTATGTTAGT 57.784 40.909 7.08 0.00 0.00 2.24
4474 5604 1.369209 CGACACAAAGCAAGGCACG 60.369 57.895 0.00 0.00 0.00 5.34
4525 5661 7.600065 ACTAGCGTCTCTTCATTTAACTGTTA 58.400 34.615 0.00 0.00 0.00 2.41
4526 5662 6.456501 ACTAGCGTCTCTTCATTTAACTGTT 58.543 36.000 0.00 0.00 0.00 3.16
4581 5717 1.608590 CTTGTTCACCGCCAGATGTTT 59.391 47.619 0.00 0.00 0.00 2.83
4593 5729 8.965986 AAAAGAAACTTGTTAGACTTGTTCAC 57.034 30.769 0.00 0.00 0.00 3.18
4636 5773 5.621197 ACGCTAATAAACATTGCAAGACA 57.379 34.783 4.94 0.00 0.00 3.41
4637 5774 7.110216 CGAATACGCTAATAAACATTGCAAGAC 59.890 37.037 4.94 0.00 0.00 3.01
4638 5775 7.010645 TCGAATACGCTAATAAACATTGCAAGA 59.989 33.333 4.94 0.00 39.58 3.02
4639 5776 7.123190 TCGAATACGCTAATAAACATTGCAAG 58.877 34.615 4.94 0.00 39.58 4.01
4640 5777 7.006187 TCGAATACGCTAATAAACATTGCAA 57.994 32.000 0.00 0.00 39.58 4.08
4642 5779 8.488979 AATTCGAATACGCTAATAAACATTGC 57.511 30.769 11.83 0.00 39.58 3.56
4663 5924 6.142798 CACAACATTGCAAGACACACTAATTC 59.857 38.462 4.94 0.00 0.00 2.17
4667 5928 3.243035 GCACAACATTGCAAGACACACTA 60.243 43.478 4.94 0.00 42.49 2.74
4708 5970 1.259609 TCTTTTCAGCATTGCCCAGG 58.740 50.000 4.70 0.00 0.00 4.45
4709 5971 3.062042 GTTTCTTTTCAGCATTGCCCAG 58.938 45.455 4.70 0.00 0.00 4.45
4725 5987 9.657419 GGATCATTGAAATTTTGTATGGTTTCT 57.343 29.630 0.00 0.00 33.06 2.52
4729 5991 7.493499 TGGGATCATTGAAATTTTGTATGGT 57.507 32.000 0.00 0.00 0.00 3.55
4757 6019 8.665685 GGTCAATGAAAGATGAACGTTACTATT 58.334 33.333 0.00 0.00 0.00 1.73
4764 6048 3.186409 CGTGGTCAATGAAAGATGAACGT 59.814 43.478 0.00 0.00 36.02 3.99
4766 6050 4.142816 CCTCGTGGTCAATGAAAGATGAAC 60.143 45.833 0.00 0.00 33.81 3.18
4785 6069 1.709147 CGGATCTTTTGGCTGCCTCG 61.709 60.000 21.03 5.55 0.00 4.63
4805 6089 4.846551 GGCCGTGTTTTGCCTTTT 57.153 50.000 0.00 0.00 44.46 2.27
4818 6102 2.525055 CGAACATGTTATTTTGGGCCG 58.475 47.619 11.95 3.58 0.00 6.13
4830 6114 2.264005 TTGCAACCTACCGAACATGT 57.736 45.000 0.00 0.00 0.00 3.21
4851 6135 6.040054 TGCAAGAAATAATCATGGTGAGATGG 59.960 38.462 0.00 0.00 0.00 3.51
4853 6137 6.238566 CGTGCAAGAAATAATCATGGTGAGAT 60.239 38.462 0.00 0.00 0.00 2.75
4861 6145 5.009010 GGTCCATCGTGCAAGAAATAATCAT 59.991 40.000 6.39 0.00 0.00 2.45
4872 6156 0.107643 TGTTGAGGTCCATCGTGCAA 59.892 50.000 0.00 0.00 0.00 4.08
4973 6259 0.247185 GGTTGCACCCATGGTTGATG 59.753 55.000 14.42 5.85 31.02 3.07
5004 6290 5.825593 TTATGATCCCTGGTCTATGTTCC 57.174 43.478 0.00 0.00 0.00 3.62
5017 6303 5.106791 CGAAGCTGATGACATTTATGATCCC 60.107 44.000 0.00 0.00 0.00 3.85
5038 6324 3.078837 GTGAGGCTGATTTTAACCCGAA 58.921 45.455 0.00 0.00 0.00 4.30
5040 6326 2.711542 AGTGAGGCTGATTTTAACCCG 58.288 47.619 0.00 0.00 0.00 5.28
5053 6339 3.403558 GGGAGGGACCAGTGAGGC 61.404 72.222 0.00 0.00 43.14 4.70
5089 6375 2.162681 GAGTGGAAATCCTGTTGGTGG 58.837 52.381 0.44 0.00 36.82 4.61
5115 6401 2.683768 AGAAACGGAGGGAGCATCTAT 58.316 47.619 0.00 0.00 33.73 1.98
5121 6407 6.645827 GTCTTATATTTAGAAACGGAGGGAGC 59.354 42.308 0.00 0.00 0.00 4.70
5153 6439 9.591792 CGTGTGTAATCCATATTGATGATATCT 57.408 33.333 3.98 0.00 34.73 1.98
5154 6440 8.820933 CCGTGTGTAATCCATATTGATGATATC 58.179 37.037 0.00 0.00 34.73 1.63
5155 6441 8.539544 TCCGTGTGTAATCCATATTGATGATAT 58.460 33.333 0.00 0.00 34.73 1.63
5156 6442 7.902087 TCCGTGTGTAATCCATATTGATGATA 58.098 34.615 0.00 0.00 34.73 2.15
5157 6443 6.768483 TCCGTGTGTAATCCATATTGATGAT 58.232 36.000 0.00 0.00 34.73 2.45
5158 6444 6.168270 TCCGTGTGTAATCCATATTGATGA 57.832 37.500 0.00 0.00 34.73 2.92
5159 6445 7.439157 AATCCGTGTGTAATCCATATTGATG 57.561 36.000 0.00 0.00 0.00 3.07
5176 6462 6.565234 AGTGAATCTACACTCTAAATCCGTG 58.435 40.000 0.00 0.00 46.36 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.