Multiple sequence alignment - TraesCS7D01G048500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G048500 chr7D 100.000 2704 0 0 1 2704 25007617 25010320 0.000000e+00 4994.0
1 TraesCS7D01G048500 chr7D 78.261 414 63 16 334 727 25014614 25015020 9.670000e-60 241.0
2 TraesCS7D01G048500 chr7D 81.140 228 37 3 1482 1703 25032616 25032843 7.690000e-41 178.0
3 TraesCS7D01G048500 chr7D 97.778 90 2 0 1870 1959 45570037 45570126 3.600000e-34 156.0
4 TraesCS7D01G048500 chr7D 95.652 69 3 0 2045 2113 25009422 25009490 7.910000e-21 111.0
5 TraesCS7D01G048500 chr7D 95.652 69 3 0 1806 1874 25009661 25009729 7.910000e-21 111.0
6 TraesCS7D01G048500 chr4A 94.312 756 38 2 1002 1756 708596083 708595332 0.000000e+00 1153.0
7 TraesCS7D01G048500 chr4A 87.852 461 19 15 2265 2702 708595334 708594888 8.640000e-140 507.0
8 TraesCS7D01G048500 chr4A 73.810 756 120 38 1 727 708582732 708582026 7.530000e-56 228.0
9 TraesCS7D01G048500 chr4A 98.837 86 1 0 1873 1958 586363630 586363715 1.300000e-33 154.0
10 TraesCS7D01G048500 chr4A 93.069 101 6 1 1858 1958 580720912 580720813 2.170000e-31 147.0
11 TraesCS7D01G048500 chr7A 88.041 970 52 34 904 1864 25859096 25860010 0.000000e+00 1090.0
12 TraesCS7D01G048500 chr7A 76.416 1077 148 56 1 1042 25872688 25873693 4.050000e-133 484.0
13 TraesCS7D01G048500 chr7A 74.832 743 119 33 1 717 25870952 25871652 9.540000e-70 274.0
14 TraesCS7D01G048500 chr7A 76.000 200 22 13 2371 2552 25859982 25860173 2.230000e-11 80.5
15 TraesCS7D01G048500 chr2D 98.851 87 1 0 1874 1960 603651336 603651250 3.600000e-34 156.0
16 TraesCS7D01G048500 chr2D 91.262 103 9 0 1867 1969 85925999 85925897 1.010000e-29 141.0
17 TraesCS7D01G048500 chr1A 98.837 86 1 0 1874 1959 480425577 480425662 1.300000e-33 154.0
18 TraesCS7D01G048500 chr4B 94.845 97 4 1 1869 1965 1994881 1994976 1.680000e-32 150.0
19 TraesCS7D01G048500 chr6D 94.792 96 4 1 1871 1965 132853786 132853881 6.030000e-32 148.0
20 TraesCS7D01G048500 chr5A 89.815 108 9 2 1874 1981 660790600 660790495 1.310000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G048500 chr7D 25007617 25010320 2703 False 1738.666667 4994 97.101333 1 2704 3 chr7D.!!$F4 2703
1 TraesCS7D01G048500 chr4A 708594888 708596083 1195 True 830.000000 1153 91.082000 1002 2702 2 chr4A.!!$R3 1700
2 TraesCS7D01G048500 chr4A 708582026 708582732 706 True 228.000000 228 73.810000 1 727 1 chr4A.!!$R2 726
3 TraesCS7D01G048500 chr7A 25859096 25860173 1077 False 585.250000 1090 82.020500 904 2552 2 chr7A.!!$F1 1648
4 TraesCS7D01G048500 chr7A 25870952 25873693 2741 False 379.000000 484 75.624000 1 1042 2 chr7A.!!$F2 1041

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
994 2784 0.3199 CCAGACCACTTCACTCCACG 60.32 60.0 0.0 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2624 4449 0.169672 CTTGAAATCCTGCGCACCTG 59.83 55.0 5.66 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.515602 ATTGCCCAGAACTGAAACTCT 57.484 42.857 3.19 0.00 0.00 3.24
41 45 5.201713 TCTAGCTAATCACATAGTGGCAC 57.798 43.478 10.29 10.29 33.87 5.01
43 47 2.168521 AGCTAATCACATAGTGGCACGT 59.831 45.455 12.71 0.88 33.87 4.49
44 48 2.936498 GCTAATCACATAGTGGCACGTT 59.064 45.455 12.71 0.18 33.87 3.99
51 55 4.322424 TCACATAGTGGCACGTTAAGTGAT 60.322 41.667 21.34 3.63 42.61 3.06
52 56 5.798636 TCACATAGTGGCACGTTAAGTGATT 60.799 40.000 21.34 3.02 42.61 2.57
68 72 4.506838 GTGATTCGCACATCACTAACTC 57.493 45.455 15.11 0.00 46.64 3.01
69 73 3.000674 GTGATTCGCACATCACTAACTCG 60.001 47.826 15.11 0.00 46.64 4.18
71 75 2.717580 TCGCACATCACTAACTCGTT 57.282 45.000 0.00 0.00 0.00 3.85
72 76 2.592194 TCGCACATCACTAACTCGTTC 58.408 47.619 0.00 0.00 0.00 3.95
73 77 2.228103 TCGCACATCACTAACTCGTTCT 59.772 45.455 0.00 0.00 0.00 3.01
74 78 2.594654 CGCACATCACTAACTCGTTCTC 59.405 50.000 0.00 0.00 0.00 2.87
75 79 3.670895 CGCACATCACTAACTCGTTCTCT 60.671 47.826 0.00 0.00 0.00 3.10
78 82 5.328691 CACATCACTAACTCGTTCTCTCTC 58.671 45.833 0.00 0.00 0.00 3.20
81 85 5.155278 TCACTAACTCGTTCTCTCTCTCT 57.845 43.478 0.00 0.00 0.00 3.10
98 102 5.971763 TCTCTCTCTTTTGCTCATAAGTCC 58.028 41.667 1.22 0.00 0.00 3.85
105 109 5.525012 TCTTTTGCTCATAAGTCCATCATCG 59.475 40.000 1.22 0.00 0.00 3.84
106 112 4.670896 TTGCTCATAAGTCCATCATCGA 57.329 40.909 0.00 0.00 0.00 3.59
108 114 3.384467 TGCTCATAAGTCCATCATCGACA 59.616 43.478 0.00 0.00 32.41 4.35
114 120 1.751351 AGTCCATCATCGACATCACGT 59.249 47.619 0.00 0.00 32.41 4.49
115 121 2.949644 AGTCCATCATCGACATCACGTA 59.050 45.455 0.00 0.00 32.41 3.57
116 122 3.570125 AGTCCATCATCGACATCACGTAT 59.430 43.478 0.00 0.00 32.41 3.06
125 131 7.922837 TCATCGACATCACGTATACTAGAAAA 58.077 34.615 0.00 0.00 34.70 2.29
127 133 8.682895 CATCGACATCACGTATACTAGAAAAAG 58.317 37.037 0.00 0.00 34.70 2.27
145 155 4.607293 AAAGAAATCAAGGCAAGAACCC 57.393 40.909 0.00 0.00 0.00 4.11
146 156 3.532641 AGAAATCAAGGCAAGAACCCT 57.467 42.857 0.00 0.00 0.00 4.34
147 157 4.657814 AGAAATCAAGGCAAGAACCCTA 57.342 40.909 0.00 0.00 30.93 3.53
148 158 4.593956 AGAAATCAAGGCAAGAACCCTAG 58.406 43.478 0.00 0.00 30.93 3.02
149 159 4.289672 AGAAATCAAGGCAAGAACCCTAGA 59.710 41.667 0.00 0.00 30.93 2.43
150 160 4.870021 AATCAAGGCAAGAACCCTAGAT 57.130 40.909 0.00 0.00 30.93 1.98
158 169 4.446889 GGCAAGAACCCTAGATCAATCCAT 60.447 45.833 0.00 0.00 0.00 3.41
159 170 4.518211 GCAAGAACCCTAGATCAATCCATG 59.482 45.833 0.00 0.00 0.00 3.66
160 171 5.688807 CAAGAACCCTAGATCAATCCATGT 58.311 41.667 0.00 0.00 0.00 3.21
173 184 8.153550 AGATCAATCCATGTACTTTGTCCTATC 58.846 37.037 0.00 0.00 0.00 2.08
176 187 7.125659 TCAATCCATGTACTTTGTCCTATCTGA 59.874 37.037 0.00 0.00 0.00 3.27
255 266 5.125097 ACACTACTACCTCATACTTTGTCCG 59.875 44.000 0.00 0.00 0.00 4.79
256 267 4.643784 ACTACTACCTCATACTTTGTCCGG 59.356 45.833 0.00 0.00 0.00 5.14
271 282 7.090173 ACTTTGTCCGGTTGATTTGAAATATG 58.910 34.615 0.00 0.00 0.00 1.78
273 284 6.435430 TGTCCGGTTGATTTGAAATATGAG 57.565 37.500 0.00 0.00 0.00 2.90
277 288 7.857885 GTCCGGTTGATTTGAAATATGAGAATC 59.142 37.037 0.00 0.00 0.00 2.52
278 289 7.775093 TCCGGTTGATTTGAAATATGAGAATCT 59.225 33.333 0.00 0.00 34.92 2.40
279 290 8.408601 CCGGTTGATTTGAAATATGAGAATCTT 58.591 33.333 0.00 0.00 34.92 2.40
280 291 9.793252 CGGTTGATTTGAAATATGAGAATCTTT 57.207 29.630 0.00 0.00 34.92 2.52
302 313 8.144478 TCTTTTAGATTCCGACAGATAGGATTG 58.856 37.037 0.00 0.00 36.28 2.67
303 314 7.597288 TTTAGATTCCGACAGATAGGATTGA 57.403 36.000 0.00 0.00 36.28 2.57
331 343 7.703058 TGAAGATTCACATAGTACTCACTCA 57.297 36.000 0.00 0.00 32.31 3.41
338 350 7.050970 TCACATAGTACTCACTCAAACAGTT 57.949 36.000 0.00 0.00 36.14 3.16
339 351 8.173542 TCACATAGTACTCACTCAAACAGTTA 57.826 34.615 0.00 0.00 36.14 2.24
348 360 8.034058 ACTCACTCAAACAGTTATATTCTTGC 57.966 34.615 0.00 0.00 30.26 4.01
350 362 8.032952 TCACTCAAACAGTTATATTCTTGCAG 57.967 34.615 0.00 0.00 30.26 4.41
352 364 6.375455 ACTCAAACAGTTATATTCTTGCAGGG 59.625 38.462 0.00 0.00 26.56 4.45
369 385 3.347216 CAGGGGTTAGGAGAATTGTGTG 58.653 50.000 0.00 0.00 0.00 3.82
370 386 2.308866 AGGGGTTAGGAGAATTGTGTGG 59.691 50.000 0.00 0.00 0.00 4.17
412 428 7.874528 TCGATCATGAGCACTATGAAACATTAT 59.125 33.333 12.15 0.00 38.01 1.28
413 429 9.143631 CGATCATGAGCACTATGAAACATTATA 57.856 33.333 12.15 0.00 38.01 0.98
416 432 8.650490 TCATGAGCACTATGAAACATTATAGGA 58.350 33.333 0.00 0.00 31.98 2.94
417 433 9.445878 CATGAGCACTATGAAACATTATAGGAT 57.554 33.333 0.00 0.00 32.45 3.24
420 436 9.372369 GAGCACTATGAAACATTATAGGATACC 57.628 37.037 0.00 0.00 32.45 2.73
442 459 7.898014 ACCTAATGACCATTTATTTCCTTCC 57.102 36.000 0.17 0.00 32.50 3.46
445 462 8.981659 CCTAATGACCATTTATTTCCTTCCTTT 58.018 33.333 0.17 0.00 32.50 3.11
455 476 8.575649 TTTATTTCCTTCCTTTAGATGTCCAC 57.424 34.615 0.00 0.00 0.00 4.02
456 477 3.887621 TCCTTCCTTTAGATGTCCACG 57.112 47.619 0.00 0.00 0.00 4.94
464 485 6.703319 TCCTTTAGATGTCCACGTAATTCAA 58.297 36.000 0.00 0.00 0.00 2.69
465 486 7.335627 TCCTTTAGATGTCCACGTAATTCAAT 58.664 34.615 0.00 0.00 0.00 2.57
468 489 8.786826 TTTAGATGTCCACGTAATTCAATCTT 57.213 30.769 0.00 0.00 0.00 2.40
470 491 7.076842 AGATGTCCACGTAATTCAATCTTTG 57.923 36.000 0.00 0.00 0.00 2.77
473 494 7.033530 TGTCCACGTAATTCAATCTTTGTTT 57.966 32.000 0.00 0.00 0.00 2.83
480 501 9.743057 ACGTAATTCAATCTTTGTTTTCAATGA 57.257 25.926 0.00 0.00 44.21 2.57
487 513 5.514274 TCTTTGTTTTCAATGACCACCTC 57.486 39.130 0.00 0.00 38.47 3.85
492 518 5.690865 TGTTTTCAATGACCACCTCTTACT 58.309 37.500 0.00 0.00 0.00 2.24
496 522 5.661056 TCAATGACCACCTCTTACTACTG 57.339 43.478 0.00 0.00 0.00 2.74
525 551 2.100197 TCTCTAGTGCACCACGCTATT 58.900 47.619 14.63 0.00 40.53 1.73
526 552 2.159240 TCTCTAGTGCACCACGCTATTG 60.159 50.000 14.63 0.00 40.53 1.90
527 553 1.822371 TCTAGTGCACCACGCTATTGA 59.178 47.619 14.63 0.00 40.53 2.57
528 554 1.927174 CTAGTGCACCACGCTATTGAC 59.073 52.381 14.63 0.00 40.53 3.18
534 560 2.834689 CACCACGCTATTGACGAAAAC 58.165 47.619 0.00 0.00 0.00 2.43
535 561 2.478894 CACCACGCTATTGACGAAAACT 59.521 45.455 0.00 0.00 0.00 2.66
536 562 2.478894 ACCACGCTATTGACGAAAACTG 59.521 45.455 0.00 0.00 0.00 3.16
537 563 2.734606 CCACGCTATTGACGAAAACTGA 59.265 45.455 0.00 0.00 0.00 3.41
540 566 4.607235 CACGCTATTGACGAAAACTGAAAC 59.393 41.667 0.00 0.00 0.00 2.78
542 568 4.084013 CGCTATTGACGAAAACTGAAACCT 60.084 41.667 0.00 0.00 0.00 3.50
543 569 5.147162 GCTATTGACGAAAACTGAAACCTG 58.853 41.667 0.00 0.00 0.00 4.00
545 571 4.349663 TTGACGAAAACTGAAACCTGTG 57.650 40.909 0.00 0.00 0.00 3.66
551 577 4.441792 GAAAACTGAAACCTGTGCCAAAT 58.558 39.130 0.00 0.00 0.00 2.32
555 581 3.706086 ACTGAAACCTGTGCCAAATTCTT 59.294 39.130 0.00 0.00 0.00 2.52
560 586 4.853924 ACCTGTGCCAAATTCTTTACTG 57.146 40.909 0.00 0.00 0.00 2.74
561 587 3.005791 ACCTGTGCCAAATTCTTTACTGC 59.994 43.478 0.00 0.00 0.00 4.40
562 588 3.256631 CCTGTGCCAAATTCTTTACTGCT 59.743 43.478 0.00 0.00 0.00 4.24
571 597 6.352737 CCAAATTCTTTACTGCTAGGAGGGTA 60.353 42.308 16.34 0.00 0.00 3.69
588 614 4.536765 AGGGTATCCTAAAATGGCACAAG 58.463 43.478 0.00 0.00 42.36 3.16
607 633 4.686554 ACAAGCGAGAGATTAGACAACAAC 59.313 41.667 0.00 0.00 37.83 3.32
610 636 3.242518 CGAGAGATTAGACAACAACGCA 58.757 45.455 0.00 0.00 0.00 5.24
612 638 4.327357 CGAGAGATTAGACAACAACGCATT 59.673 41.667 0.00 0.00 0.00 3.56
613 639 5.163953 CGAGAGATTAGACAACAACGCATTT 60.164 40.000 0.00 0.00 0.00 2.32
614 640 6.560253 AGAGATTAGACAACAACGCATTTT 57.440 33.333 0.00 0.00 0.00 1.82
673 706 4.264262 ACCACCTATAGGATATAGCACCGT 60.264 45.833 26.01 0.00 38.94 4.83
676 709 7.147248 ACCACCTATAGGATATAGCACCGTATA 60.147 40.741 26.01 0.00 38.94 1.47
718 755 9.231297 TGTCAGCAAAATCTAAAGCTACTTATT 57.769 29.630 0.00 0.00 35.19 1.40
719 756 9.709600 GTCAGCAAAATCTAAAGCTACTTATTC 57.290 33.333 0.00 0.00 35.19 1.75
720 757 9.672673 TCAGCAAAATCTAAAGCTACTTATTCT 57.327 29.630 0.00 0.00 35.19 2.40
762 1806 7.769220 AGGAAAGTTGATGCATAGAATTGAAG 58.231 34.615 0.00 0.00 0.00 3.02
769 2549 9.875675 GTTGATGCATAGAATTGAAGATTAGTC 57.124 33.333 0.00 0.00 0.00 2.59
770 2550 8.302965 TGATGCATAGAATTGAAGATTAGTCG 57.697 34.615 0.00 0.00 0.00 4.18
777 2557 9.817809 ATAGAATTGAAGATTAGTCGCTGTAAA 57.182 29.630 0.00 0.00 0.00 2.01
789 2569 5.126067 AGTCGCTGTAAAATGCATAAGGAT 58.874 37.500 0.00 0.00 0.00 3.24
792 2572 5.007626 TCGCTGTAAAATGCATAAGGATGAC 59.992 40.000 0.00 0.00 34.73 3.06
796 2576 7.087409 TGTAAAATGCATAAGGATGACACAG 57.913 36.000 0.00 0.00 34.73 3.66
803 2583 6.057533 TGCATAAGGATGACACAGGAAATAG 58.942 40.000 0.00 0.00 34.73 1.73
814 2594 7.004086 TGACACAGGAAATAGTTGGATTCTTT 58.996 34.615 0.00 0.00 0.00 2.52
818 2598 8.526147 CACAGGAAATAGTTGGATTCTTTGAAT 58.474 33.333 0.00 0.00 0.00 2.57
819 2599 9.753674 ACAGGAAATAGTTGGATTCTTTGAATA 57.246 29.630 0.00 0.00 0.00 1.75
839 2619 8.162878 TGAATAATCATGAGAAATTCCTGCTC 57.837 34.615 17.89 0.00 32.99 4.26
847 2627 8.464404 TCATGAGAAATTCCTGCTCTAATTTTG 58.536 33.333 0.00 0.00 35.87 2.44
848 2628 8.464404 CATGAGAAATTCCTGCTCTAATTTTGA 58.536 33.333 0.00 0.00 35.87 2.69
849 2629 8.585471 TGAGAAATTCCTGCTCTAATTTTGAT 57.415 30.769 0.00 0.00 35.87 2.57
862 2642 7.636359 GCTCTAATTTTGATTAGTACGTGCAAG 59.364 37.037 6.38 0.00 35.99 4.01
869 2649 5.981174 TGATTAGTACGTGCAAGAAAACAC 58.019 37.500 6.65 0.00 0.00 3.32
870 2650 5.756347 TGATTAGTACGTGCAAGAAAACACT 59.244 36.000 6.65 4.12 34.58 3.55
871 2651 5.646467 TTAGTACGTGCAAGAAAACACTC 57.354 39.130 6.65 0.00 34.58 3.51
872 2652 2.538449 AGTACGTGCAAGAAAACACTCG 59.462 45.455 6.65 0.00 34.58 4.18
873 2653 1.365699 ACGTGCAAGAAAACACTCGT 58.634 45.000 6.65 0.00 34.58 4.18
874 2654 2.542597 ACGTGCAAGAAAACACTCGTA 58.457 42.857 6.65 0.00 34.58 3.43
875 2655 2.283351 ACGTGCAAGAAAACACTCGTAC 59.717 45.455 6.65 0.00 34.58 3.67
876 2656 2.655577 CGTGCAAGAAAACACTCGTACG 60.656 50.000 9.53 9.53 34.58 3.67
877 2657 1.259507 TGCAAGAAAACACTCGTACGC 59.740 47.619 11.24 0.00 0.00 4.42
878 2658 1.259507 GCAAGAAAACACTCGTACGCA 59.740 47.619 11.24 0.00 0.00 5.24
879 2659 2.887733 CAAGAAAACACTCGTACGCAC 58.112 47.619 11.24 0.00 0.00 5.34
895 2675 1.945662 CACGTTTGCCACAGCTTGC 60.946 57.895 0.00 0.00 40.80 4.01
915 2696 2.683742 GCAGCTCACTATAAAAGCCCCA 60.684 50.000 0.00 0.00 36.69 4.96
920 2701 4.600062 CTCACTATAAAAGCCCCAAAGGT 58.400 43.478 0.00 0.00 38.26 3.50
947 2728 1.943340 GCCATAACACCAGCTAGAAGC 59.057 52.381 0.00 0.00 42.84 3.86
954 2741 1.127567 ACCAGCTAGAAGCCACACCA 61.128 55.000 0.00 0.00 43.77 4.17
955 2742 0.392193 CCAGCTAGAAGCCACACCAG 60.392 60.000 0.00 0.00 43.77 4.00
959 2746 1.278127 GCTAGAAGCCACACCAGGTAA 59.722 52.381 0.00 0.00 34.48 2.85
960 2747 2.678190 GCTAGAAGCCACACCAGGTAAG 60.678 54.545 0.00 0.00 34.48 2.34
961 2748 1.435256 AGAAGCCACACCAGGTAAGT 58.565 50.000 0.00 0.00 0.00 2.24
963 2750 1.071699 GAAGCCACACCAGGTAAGTCA 59.928 52.381 0.00 0.00 0.00 3.41
964 2751 1.136828 AGCCACACCAGGTAAGTCAA 58.863 50.000 0.00 0.00 0.00 3.18
965 2752 1.493022 AGCCACACCAGGTAAGTCAAA 59.507 47.619 0.00 0.00 0.00 2.69
966 2753 1.880027 GCCACACCAGGTAAGTCAAAG 59.120 52.381 0.00 0.00 0.00 2.77
967 2754 2.486548 GCCACACCAGGTAAGTCAAAGA 60.487 50.000 0.00 0.00 0.00 2.52
968 2755 3.139077 CCACACCAGGTAAGTCAAAGAC 58.861 50.000 0.00 0.00 0.00 3.01
969 2756 3.139077 CACACCAGGTAAGTCAAAGACC 58.861 50.000 0.00 0.00 32.18 3.85
970 2757 2.775384 ACACCAGGTAAGTCAAAGACCA 59.225 45.455 0.00 0.00 35.56 4.02
971 2758 3.181454 ACACCAGGTAAGTCAAAGACCAG 60.181 47.826 0.00 0.00 35.56 4.00
972 2759 3.071023 CACCAGGTAAGTCAAAGACCAGA 59.929 47.826 0.00 0.00 35.56 3.86
973 2760 3.071167 ACCAGGTAAGTCAAAGACCAGAC 59.929 47.826 0.00 0.00 35.56 3.51
994 2784 0.319900 CCAGACCACTTCACTCCACG 60.320 60.000 0.00 0.00 0.00 4.94
995 2785 0.389391 CAGACCACTTCACTCCACGT 59.611 55.000 0.00 0.00 0.00 4.49
1022 2812 1.133407 GGCGATGACTCTCGAAGAAGT 59.867 52.381 0.00 0.00 41.12 3.01
1044 2834 4.704833 TCCAAGCAGGCTGCCGAC 62.705 66.667 34.33 8.88 46.52 4.79
1143 2933 0.639392 ATGCCCTGGTCTACCTCTCT 59.361 55.000 0.02 0.00 36.82 3.10
1237 3027 3.556306 GCTGCACCCCGGCCTATA 61.556 66.667 0.00 0.00 40.06 1.31
1254 3044 4.527944 CCTATATCCTGTCCGAGATAGCA 58.472 47.826 0.00 0.00 34.23 3.49
1341 3131 2.954684 CGGCTGCAGGACCAAGGTA 61.955 63.158 17.12 0.00 0.00 3.08
1342 3132 1.377333 GGCTGCAGGACCAAGGTAC 60.377 63.158 17.12 0.00 0.00 3.34
1343 3133 1.741770 GCTGCAGGACCAAGGTACG 60.742 63.158 17.12 0.00 33.32 3.67
1344 3134 1.671742 CTGCAGGACCAAGGTACGT 59.328 57.895 5.57 0.00 33.32 3.57
1353 3143 0.241749 CCAAGGTACGTACGTGCTCA 59.758 55.000 30.65 10.37 0.00 4.26
1420 3210 6.316140 TGAATTCACTGTGTAATGTGATAGGC 59.684 38.462 3.38 0.00 41.93 3.93
1465 3255 1.646189 GTGAAGAATGACGAGGAGCC 58.354 55.000 0.00 0.00 0.00 4.70
1526 3316 1.531739 GGCTTTTCATTGGGTCGGCA 61.532 55.000 0.00 0.00 0.00 5.69
1556 3346 6.656632 GGAACCATCTCTTTCCTTCTTTTT 57.343 37.500 0.00 0.00 38.65 1.94
1566 3356 7.282450 TCTCTTTCCTTCTTTTTAAGTGTGGAC 59.718 37.037 0.00 0.00 0.00 4.02
1713 3503 2.512515 CAGAGTAGCCCTTGCGCC 60.513 66.667 4.18 0.00 44.33 6.53
1772 3562 2.677836 GCTAAGCCGAACATCAACATCA 59.322 45.455 0.00 0.00 0.00 3.07
1774 3564 2.183478 AGCCGAACATCAACATCACA 57.817 45.000 0.00 0.00 0.00 3.58
1778 3568 3.304659 GCCGAACATCAACATCACACTTT 60.305 43.478 0.00 0.00 0.00 2.66
1785 3575 7.099266 ACATCAACATCACACTTTCTCAAAA 57.901 32.000 0.00 0.00 0.00 2.44
1786 3576 7.719483 ACATCAACATCACACTTTCTCAAAAT 58.281 30.769 0.00 0.00 0.00 1.82
1787 3577 8.199449 ACATCAACATCACACTTTCTCAAAATT 58.801 29.630 0.00 0.00 0.00 1.82
1788 3578 9.681692 CATCAACATCACACTTTCTCAAAATTA 57.318 29.630 0.00 0.00 0.00 1.40
1807 3597 9.221775 CAAAATTAAGTATTGTAGCGGAACATC 57.778 33.333 0.00 0.00 0.00 3.06
1809 3599 4.380841 AAGTATTGTAGCGGAACATCGA 57.619 40.909 0.00 0.00 0.00 3.59
1811 3601 2.961526 ATTGTAGCGGAACATCGAGT 57.038 45.000 0.00 0.00 0.00 4.18
1812 3602 1.990799 TTGTAGCGGAACATCGAGTG 58.009 50.000 0.00 0.00 0.00 3.51
1813 3603 0.457853 TGTAGCGGAACATCGAGTGC 60.458 55.000 0.00 0.00 0.00 4.40
1818 3608 1.725931 GCGGAACATCGAGTGCTTTTG 60.726 52.381 0.00 0.00 0.00 2.44
1846 3636 5.490139 ACAAATTGGTAGAAGATGATGCG 57.510 39.130 0.00 0.00 0.00 4.73
1847 3637 5.185454 ACAAATTGGTAGAAGATGATGCGA 58.815 37.500 0.00 0.00 0.00 5.10
1848 3638 5.295292 ACAAATTGGTAGAAGATGATGCGAG 59.705 40.000 0.00 0.00 0.00 5.03
1849 3639 4.679373 ATTGGTAGAAGATGATGCGAGT 57.321 40.909 0.00 0.00 0.00 4.18
1850 3640 5.791336 ATTGGTAGAAGATGATGCGAGTA 57.209 39.130 0.00 0.00 0.00 2.59
1851 3641 5.791336 TTGGTAGAAGATGATGCGAGTAT 57.209 39.130 0.00 0.00 0.00 2.12
1852 3642 6.894339 TTGGTAGAAGATGATGCGAGTATA 57.106 37.500 0.00 0.00 0.00 1.47
1853 3643 7.468141 TTGGTAGAAGATGATGCGAGTATAT 57.532 36.000 0.00 0.00 0.00 0.86
1854 3644 6.856895 TGGTAGAAGATGATGCGAGTATATG 58.143 40.000 0.00 0.00 0.00 1.78
1855 3645 6.434340 TGGTAGAAGATGATGCGAGTATATGT 59.566 38.462 0.00 0.00 0.00 2.29
1856 3646 7.039714 TGGTAGAAGATGATGCGAGTATATGTT 60.040 37.037 0.00 0.00 0.00 2.71
1857 3647 8.459635 GGTAGAAGATGATGCGAGTATATGTTA 58.540 37.037 0.00 0.00 0.00 2.41
1858 3648 9.841880 GTAGAAGATGATGCGAGTATATGTTAA 57.158 33.333 0.00 0.00 0.00 2.01
1859 3649 8.978564 AGAAGATGATGCGAGTATATGTTAAG 57.021 34.615 0.00 0.00 0.00 1.85
1860 3650 8.580720 AGAAGATGATGCGAGTATATGTTAAGT 58.419 33.333 0.00 0.00 0.00 2.24
1861 3651 8.749841 AAGATGATGCGAGTATATGTTAAGTC 57.250 34.615 0.00 0.00 0.00 3.01
1862 3652 7.886338 AGATGATGCGAGTATATGTTAAGTCA 58.114 34.615 0.00 0.00 0.00 3.41
1863 3653 8.360390 AGATGATGCGAGTATATGTTAAGTCAA 58.640 33.333 0.00 0.00 0.00 3.18
1864 3654 7.930513 TGATGCGAGTATATGTTAAGTCAAG 57.069 36.000 0.00 0.00 0.00 3.02
1865 3655 7.489160 TGATGCGAGTATATGTTAAGTCAAGT 58.511 34.615 0.00 0.00 0.00 3.16
1866 3656 8.626526 TGATGCGAGTATATGTTAAGTCAAGTA 58.373 33.333 0.00 0.00 0.00 2.24
1867 3657 8.798748 ATGCGAGTATATGTTAAGTCAAGTAC 57.201 34.615 0.00 0.00 0.00 2.73
1868 3658 7.764331 TGCGAGTATATGTTAAGTCAAGTACA 58.236 34.615 0.00 0.00 0.00 2.90
1869 3659 7.913821 TGCGAGTATATGTTAAGTCAAGTACAG 59.086 37.037 0.00 0.00 0.00 2.74
1870 3660 7.914346 GCGAGTATATGTTAAGTCAAGTACAGT 59.086 37.037 0.00 0.00 0.00 3.55
1886 3676 3.369242 ACAGTAGTACTCCCTCTGTCC 57.631 52.381 0.00 0.00 34.87 4.02
1887 3677 2.025131 ACAGTAGTACTCCCTCTGTCCC 60.025 54.545 0.00 0.00 34.87 4.46
1888 3678 2.025226 CAGTAGTACTCCCTCTGTCCCA 60.025 54.545 0.00 0.00 0.00 4.37
1889 3679 2.860041 AGTAGTACTCCCTCTGTCCCAT 59.140 50.000 0.00 0.00 0.00 4.00
1890 3680 4.052922 AGTAGTACTCCCTCTGTCCCATA 58.947 47.826 0.00 0.00 0.00 2.74
1891 3681 4.481280 AGTAGTACTCCCTCTGTCCCATAA 59.519 45.833 0.00 0.00 0.00 1.90
1892 3682 4.561254 AGTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
1893 3683 5.681494 AGTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
1894 3684 6.234404 AGTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
1895 3685 7.358255 AGTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
1896 3686 7.776745 AGTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
1897 3687 7.896496 AGTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
1898 3688 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
1899 3689 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
1900 3690 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
1901 3691 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
1902 3692 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
1903 3693 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
1904 3694 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
1905 3695 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
1906 3696 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
1907 3697 9.716507 CTGTCCCATAATATAAGAACGTTTTTG 57.283 33.333 13.87 0.00 0.00 2.44
1908 3698 9.451002 TGTCCCATAATATAAGAACGTTTTTGA 57.549 29.630 13.87 2.81 0.00 2.69
1909 3699 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
1910 3700 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
1911 3701 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
1922 3712 9.485206 AGAACGTTTTTGACACTATACTAATGT 57.515 29.630 0.46 0.00 0.00 2.71
1923 3713 9.737025 GAACGTTTTTGACACTATACTAATGTC 57.263 33.333 0.46 0.00 42.54 3.06
1948 3738 9.557338 TCAAAAACGTTTTTATATTATGGGACG 57.443 29.630 32.12 18.06 38.23 4.79
1949 3739 8.800031 CAAAAACGTTTTTATATTATGGGACGG 58.200 33.333 32.12 15.00 38.23 4.79
1950 3740 7.862512 AAACGTTTTTATATTATGGGACGGA 57.137 32.000 7.96 0.00 33.95 4.69
1951 3741 7.486802 AACGTTTTTATATTATGGGACGGAG 57.513 36.000 0.00 0.00 33.95 4.63
1952 3742 5.993441 ACGTTTTTATATTATGGGACGGAGG 59.007 40.000 0.00 0.00 33.95 4.30
1953 3743 5.410439 CGTTTTTATATTATGGGACGGAGGG 59.590 44.000 0.00 0.00 0.00 4.30
1954 3744 6.536447 GTTTTTATATTATGGGACGGAGGGA 58.464 40.000 0.00 0.00 0.00 4.20
1955 3745 6.368779 TTTTATATTATGGGACGGAGGGAG 57.631 41.667 0.00 0.00 0.00 4.30
1956 3746 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
1957 3747 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
1958 3748 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
1959 3749 1.526315 TATGGGACGGAGGGAGTAGA 58.474 55.000 0.00 0.00 0.00 2.59
1960 3750 0.635009 ATGGGACGGAGGGAGTAGAA 59.365 55.000 0.00 0.00 0.00 2.10
1961 3751 0.635009 TGGGACGGAGGGAGTAGAAT 59.365 55.000 0.00 0.00 0.00 2.40
1962 3752 1.007963 TGGGACGGAGGGAGTAGAATT 59.992 52.381 0.00 0.00 0.00 2.17
1963 3753 2.117051 GGGACGGAGGGAGTAGAATTT 58.883 52.381 0.00 0.00 0.00 1.82
1964 3754 3.303049 GGGACGGAGGGAGTAGAATTTA 58.697 50.000 0.00 0.00 0.00 1.40
1965 3755 3.902467 GGGACGGAGGGAGTAGAATTTAT 59.098 47.826 0.00 0.00 0.00 1.40
1966 3756 4.021280 GGGACGGAGGGAGTAGAATTTATC 60.021 50.000 0.00 0.00 0.00 1.75
1967 3757 4.587684 GGACGGAGGGAGTAGAATTTATCA 59.412 45.833 0.00 0.00 0.00 2.15
1968 3758 5.279056 GGACGGAGGGAGTAGAATTTATCAG 60.279 48.000 0.00 0.00 0.00 2.90
1969 3759 5.209659 ACGGAGGGAGTAGAATTTATCAGT 58.790 41.667 0.00 0.00 0.00 3.41
1970 3760 5.302313 ACGGAGGGAGTAGAATTTATCAGTC 59.698 44.000 0.00 0.00 0.00 3.51
1971 3761 5.563085 CGGAGGGAGTAGAATTTATCAGTCG 60.563 48.000 0.00 0.00 0.00 4.18
1972 3762 5.279056 GGAGGGAGTAGAATTTATCAGTCGG 60.279 48.000 0.00 0.00 0.00 4.79
1973 3763 5.209659 AGGGAGTAGAATTTATCAGTCGGT 58.790 41.667 0.00 0.00 0.00 4.69
1974 3764 5.661759 AGGGAGTAGAATTTATCAGTCGGTT 59.338 40.000 0.00 0.00 0.00 4.44
1975 3765 5.753921 GGGAGTAGAATTTATCAGTCGGTTG 59.246 44.000 0.00 0.00 0.00 3.77
1976 3766 5.753921 GGAGTAGAATTTATCAGTCGGTTGG 59.246 44.000 0.00 0.00 0.00 3.77
1977 3767 6.295719 AGTAGAATTTATCAGTCGGTTGGT 57.704 37.500 0.00 0.00 0.00 3.67
1978 3768 6.708285 AGTAGAATTTATCAGTCGGTTGGTT 58.292 36.000 0.00 0.00 0.00 3.67
1979 3769 6.817140 AGTAGAATTTATCAGTCGGTTGGTTC 59.183 38.462 0.00 0.00 0.00 3.62
1980 3770 5.805728 AGAATTTATCAGTCGGTTGGTTCT 58.194 37.500 0.00 0.00 0.00 3.01
1981 3771 5.875359 AGAATTTATCAGTCGGTTGGTTCTC 59.125 40.000 0.00 0.00 0.00 2.87
1982 3772 3.604875 TTATCAGTCGGTTGGTTCTCC 57.395 47.619 0.00 0.00 0.00 3.71
1983 3773 0.246635 ATCAGTCGGTTGGTTCTCCG 59.753 55.000 0.00 0.00 46.93 4.63
1984 3774 1.111116 TCAGTCGGTTGGTTCTCCGT 61.111 55.000 3.64 0.00 45.88 4.69
1985 3775 0.944311 CAGTCGGTTGGTTCTCCGTG 60.944 60.000 3.64 0.00 45.88 4.94
1986 3776 1.068585 GTCGGTTGGTTCTCCGTGT 59.931 57.895 3.64 0.00 45.88 4.49
1987 3777 0.531311 GTCGGTTGGTTCTCCGTGTT 60.531 55.000 3.64 0.00 45.88 3.32
1988 3778 0.178533 TCGGTTGGTTCTCCGTGTTT 59.821 50.000 3.64 0.00 45.88 2.83
1989 3779 0.306533 CGGTTGGTTCTCCGTGTTTG 59.693 55.000 0.00 0.00 41.58 2.93
1990 3780 1.385528 GGTTGGTTCTCCGTGTTTGT 58.614 50.000 0.00 0.00 36.30 2.83
1991 3781 1.746787 GGTTGGTTCTCCGTGTTTGTT 59.253 47.619 0.00 0.00 36.30 2.83
1992 3782 2.944349 GGTTGGTTCTCCGTGTTTGTTA 59.056 45.455 0.00 0.00 36.30 2.41
1993 3783 3.566742 GGTTGGTTCTCCGTGTTTGTTAT 59.433 43.478 0.00 0.00 36.30 1.89
1994 3784 4.319984 GGTTGGTTCTCCGTGTTTGTTATC 60.320 45.833 0.00 0.00 36.30 1.75
1995 3785 4.074627 TGGTTCTCCGTGTTTGTTATCA 57.925 40.909 0.00 0.00 36.30 2.15
1996 3786 4.452825 TGGTTCTCCGTGTTTGTTATCAA 58.547 39.130 0.00 0.00 36.30 2.57
1997 3787 4.273969 TGGTTCTCCGTGTTTGTTATCAAC 59.726 41.667 0.00 0.00 36.30 3.18
1998 3788 4.514066 GGTTCTCCGTGTTTGTTATCAACT 59.486 41.667 0.00 0.00 32.93 3.16
1999 3789 5.440685 GTTCTCCGTGTTTGTTATCAACTG 58.559 41.667 0.00 0.00 32.93 3.16
2000 3790 4.951254 TCTCCGTGTTTGTTATCAACTGA 58.049 39.130 0.00 0.00 32.93 3.41
2001 3791 5.361427 TCTCCGTGTTTGTTATCAACTGAA 58.639 37.500 0.00 0.00 32.93 3.02
2002 3792 5.995282 TCTCCGTGTTTGTTATCAACTGAAT 59.005 36.000 0.00 0.00 32.93 2.57
2003 3793 5.996219 TCCGTGTTTGTTATCAACTGAATG 58.004 37.500 0.00 0.00 32.93 2.67
2004 3794 5.529430 TCCGTGTTTGTTATCAACTGAATGT 59.471 36.000 0.00 0.00 32.93 2.71
2005 3795 5.624900 CCGTGTTTGTTATCAACTGAATGTG 59.375 40.000 0.00 0.00 32.93 3.21
2006 3796 6.198687 CGTGTTTGTTATCAACTGAATGTGT 58.801 36.000 0.00 0.00 32.93 3.72
2007 3797 7.348956 CGTGTTTGTTATCAACTGAATGTGTA 58.651 34.615 0.00 0.00 32.93 2.90
2008 3798 7.853437 CGTGTTTGTTATCAACTGAATGTGTAA 59.147 33.333 0.00 0.00 32.93 2.41
2009 3799 9.677567 GTGTTTGTTATCAACTGAATGTGTAAT 57.322 29.630 0.00 0.00 32.93 1.89
2014 3804 9.676195 TGTTATCAACTGAATGTGTAATTGTTG 57.324 29.630 0.00 0.00 35.89 3.33
2015 3805 9.677567 GTTATCAACTGAATGTGTAATTGTTGT 57.322 29.630 0.00 0.00 35.98 3.32
2016 3806 9.891828 TTATCAACTGAATGTGTAATTGTTGTC 57.108 29.630 0.00 0.00 35.98 3.18
2017 3807 7.326968 TCAACTGAATGTGTAATTGTTGTCA 57.673 32.000 0.00 0.00 35.98 3.58
2018 3808 7.939782 TCAACTGAATGTGTAATTGTTGTCAT 58.060 30.769 0.00 0.00 35.98 3.06
2019 3809 8.075574 TCAACTGAATGTGTAATTGTTGTCATC 58.924 33.333 0.00 0.00 35.98 2.92
2020 3810 7.509141 ACTGAATGTGTAATTGTTGTCATCA 57.491 32.000 0.00 0.00 0.00 3.07
2021 3811 7.587629 ACTGAATGTGTAATTGTTGTCATCAG 58.412 34.615 0.00 0.00 0.00 2.90
2022 3812 7.229306 ACTGAATGTGTAATTGTTGTCATCAGT 59.771 33.333 0.00 0.00 0.00 3.41
2023 3813 7.939782 TGAATGTGTAATTGTTGTCATCAGTT 58.060 30.769 0.00 0.00 0.00 3.16
2024 3814 9.061435 TGAATGTGTAATTGTTGTCATCAGTTA 57.939 29.630 0.00 0.00 0.00 2.24
2027 3817 8.614469 TGTGTAATTGTTGTCATCAGTTATCA 57.386 30.769 3.13 3.93 0.00 2.15
2028 3818 8.503196 TGTGTAATTGTTGTCATCAGTTATCAC 58.497 33.333 15.42 15.42 0.00 3.06
2029 3819 8.503196 GTGTAATTGTTGTCATCAGTTATCACA 58.497 33.333 16.31 7.45 30.34 3.58
2030 3820 9.061435 TGTAATTGTTGTCATCAGTTATCACAA 57.939 29.630 3.13 0.00 0.00 3.33
2031 3821 9.891828 GTAATTGTTGTCATCAGTTATCACAAA 57.108 29.630 3.13 0.00 0.00 2.83
2033 3823 6.000891 TGTTGTCATCAGTTATCACAAAGC 57.999 37.500 0.00 0.00 0.00 3.51
2034 3824 5.764686 TGTTGTCATCAGTTATCACAAAGCT 59.235 36.000 0.00 0.00 0.00 3.74
2035 3825 6.073058 TGTTGTCATCAGTTATCACAAAGCTC 60.073 38.462 0.00 0.00 0.00 4.09
2036 3826 4.937620 TGTCATCAGTTATCACAAAGCTCC 59.062 41.667 0.00 0.00 0.00 4.70
2037 3827 4.937620 GTCATCAGTTATCACAAAGCTCCA 59.062 41.667 0.00 0.00 0.00 3.86
2038 3828 5.412594 GTCATCAGTTATCACAAAGCTCCAA 59.587 40.000 0.00 0.00 0.00 3.53
2039 3829 6.094603 GTCATCAGTTATCACAAAGCTCCAAT 59.905 38.462 0.00 0.00 0.00 3.16
2040 3830 5.885230 TCAGTTATCACAAAGCTCCAATG 57.115 39.130 0.00 0.00 0.00 2.82
2041 3831 4.156556 TCAGTTATCACAAAGCTCCAATGC 59.843 41.667 0.00 0.00 0.00 3.56
2042 3832 4.157289 CAGTTATCACAAAGCTCCAATGCT 59.843 41.667 0.00 0.00 46.40 3.79
2043 3833 5.355071 CAGTTATCACAAAGCTCCAATGCTA 59.645 40.000 0.00 0.00 43.24 3.49
2044 3834 5.945784 AGTTATCACAAAGCTCCAATGCTAA 59.054 36.000 0.00 0.00 43.24 3.09
2045 3835 6.604795 AGTTATCACAAAGCTCCAATGCTAAT 59.395 34.615 0.00 0.00 43.24 1.73
2046 3836 4.970662 TCACAAAGCTCCAATGCTAATC 57.029 40.909 0.00 0.00 43.24 1.75
2047 3837 3.374988 TCACAAAGCTCCAATGCTAATCG 59.625 43.478 0.00 0.00 43.24 3.34
2048 3838 3.374988 CACAAAGCTCCAATGCTAATCGA 59.625 43.478 0.00 0.00 43.24 3.59
2049 3839 3.624861 ACAAAGCTCCAATGCTAATCGAG 59.375 43.478 0.00 0.00 43.24 4.04
2050 3840 3.550437 AAGCTCCAATGCTAATCGAGT 57.450 42.857 0.00 0.00 43.24 4.18
2051 3841 2.831333 AGCTCCAATGCTAATCGAGTG 58.169 47.619 0.00 0.00 42.10 3.51
2052 3842 1.262683 GCTCCAATGCTAATCGAGTGC 59.737 52.381 0.00 0.00 0.00 4.40
2053 3843 2.831333 CTCCAATGCTAATCGAGTGCT 58.169 47.619 0.00 0.00 0.00 4.40
2054 3844 3.201290 CTCCAATGCTAATCGAGTGCTT 58.799 45.455 0.00 0.00 0.00 3.91
2055 3845 3.609853 TCCAATGCTAATCGAGTGCTTT 58.390 40.909 0.00 0.00 0.00 3.51
2056 3846 4.009675 TCCAATGCTAATCGAGTGCTTTT 58.990 39.130 0.00 0.00 0.00 2.27
2057 3847 4.100529 CCAATGCTAATCGAGTGCTTTTG 58.899 43.478 0.00 6.21 0.00 2.44
2058 3848 4.379813 CCAATGCTAATCGAGTGCTTTTGT 60.380 41.667 0.00 0.00 0.00 2.83
2059 3849 5.163764 CCAATGCTAATCGAGTGCTTTTGTA 60.164 40.000 0.00 0.00 0.00 2.41
2060 3850 4.921470 TGCTAATCGAGTGCTTTTGTAC 57.079 40.909 0.00 0.00 35.17 2.90
2061 3851 3.682858 TGCTAATCGAGTGCTTTTGTACC 59.317 43.478 0.00 0.00 35.56 3.34
2062 3852 3.682858 GCTAATCGAGTGCTTTTGTACCA 59.317 43.478 0.00 0.00 35.56 3.25
2063 3853 4.153475 GCTAATCGAGTGCTTTTGTACCAA 59.847 41.667 0.00 0.00 35.56 3.67
2064 3854 4.483476 AATCGAGTGCTTTTGTACCAAC 57.517 40.909 0.00 0.00 35.56 3.77
2065 3855 2.907634 TCGAGTGCTTTTGTACCAACA 58.092 42.857 0.00 0.00 35.56 3.33
2066 3856 3.271729 TCGAGTGCTTTTGTACCAACAA 58.728 40.909 0.00 0.00 43.85 2.83
2084 3874 5.644644 CAACAAATTGGTAGAAGAGGATGC 58.355 41.667 0.00 0.00 31.63 3.91
2085 3875 4.922206 ACAAATTGGTAGAAGAGGATGCA 58.078 39.130 0.00 0.00 0.00 3.96
2086 3876 5.324409 ACAAATTGGTAGAAGAGGATGCAA 58.676 37.500 0.00 0.00 0.00 4.08
2087 3877 5.416952 ACAAATTGGTAGAAGAGGATGCAAG 59.583 40.000 0.00 0.00 0.00 4.01
2088 3878 4.851639 ATTGGTAGAAGAGGATGCAAGT 57.148 40.909 0.00 0.00 0.00 3.16
2089 3879 5.957771 ATTGGTAGAAGAGGATGCAAGTA 57.042 39.130 0.00 0.00 0.00 2.24
2090 3880 5.957771 TTGGTAGAAGAGGATGCAAGTAT 57.042 39.130 0.00 0.00 0.00 2.12
2091 3881 7.618019 ATTGGTAGAAGAGGATGCAAGTATA 57.382 36.000 0.00 0.00 0.00 1.47
2092 3882 7.618019 TTGGTAGAAGAGGATGCAAGTATAT 57.382 36.000 0.00 0.00 0.00 0.86
2093 3883 6.997655 TGGTAGAAGAGGATGCAAGTATATG 58.002 40.000 0.00 0.00 0.00 1.78
2094 3884 6.554982 TGGTAGAAGAGGATGCAAGTATATGT 59.445 38.462 0.00 0.00 0.00 2.29
2095 3885 7.071196 TGGTAGAAGAGGATGCAAGTATATGTT 59.929 37.037 0.00 0.00 0.00 2.71
2096 3886 8.585881 GGTAGAAGAGGATGCAAGTATATGTTA 58.414 37.037 0.00 0.00 0.00 2.41
2097 3887 9.982651 GTAGAAGAGGATGCAAGTATATGTTAA 57.017 33.333 0.00 0.00 0.00 2.01
2099 3889 8.709308 AGAAGAGGATGCAAGTATATGTTAAGT 58.291 33.333 0.00 0.00 0.00 2.24
2100 3890 8.894768 AAGAGGATGCAAGTATATGTTAAGTC 57.105 34.615 0.00 0.00 0.00 3.01
2101 3891 8.023021 AGAGGATGCAAGTATATGTTAAGTCA 57.977 34.615 0.00 0.00 0.00 3.41
2102 3892 8.486210 AGAGGATGCAAGTATATGTTAAGTCAA 58.514 33.333 0.00 0.00 0.00 3.18
2103 3893 9.109393 GAGGATGCAAGTATATGTTAAGTCAAA 57.891 33.333 0.00 0.00 0.00 2.69
2104 3894 9.632638 AGGATGCAAGTATATGTTAAGTCAAAT 57.367 29.630 0.00 0.00 0.00 2.32
2130 3920 7.490000 ACAGTAGTCTAGAATTTATCCGTTGG 58.510 38.462 0.00 0.00 0.00 3.77
2131 3921 7.123847 ACAGTAGTCTAGAATTTATCCGTTGGT 59.876 37.037 0.00 0.00 0.00 3.67
2132 3922 7.980099 CAGTAGTCTAGAATTTATCCGTTGGTT 59.020 37.037 0.00 0.00 0.00 3.67
2133 3923 7.980099 AGTAGTCTAGAATTTATCCGTTGGTTG 59.020 37.037 0.00 0.00 0.00 3.77
2134 3924 6.113411 AGTCTAGAATTTATCCGTTGGTTGG 58.887 40.000 0.00 0.00 0.00 3.77
2135 3925 5.878669 GTCTAGAATTTATCCGTTGGTTGGT 59.121 40.000 0.00 0.00 0.00 3.67
2136 3926 6.373495 GTCTAGAATTTATCCGTTGGTTGGTT 59.627 38.462 0.00 0.00 0.00 3.67
2137 3927 5.638596 AGAATTTATCCGTTGGTTGGTTC 57.361 39.130 0.00 0.00 0.00 3.62
2138 3928 5.321927 AGAATTTATCCGTTGGTTGGTTCT 58.678 37.500 0.00 0.00 0.00 3.01
2139 3929 5.414765 AGAATTTATCCGTTGGTTGGTTCTC 59.585 40.000 0.00 0.00 0.00 2.87
2140 3930 2.773993 TATCCGTTGGTTGGTTCTCC 57.226 50.000 0.00 0.00 0.00 3.71
2141 3931 0.768622 ATCCGTTGGTTGGTTCTCCA 59.231 50.000 0.00 0.00 42.66 3.86
2142 3932 0.179040 TCCGTTGGTTGGTTCTCCAC 60.179 55.000 0.00 0.00 44.22 4.02
2143 3933 1.503818 CCGTTGGTTGGTTCTCCACG 61.504 60.000 0.00 0.00 44.22 4.94
2144 3934 0.812412 CGTTGGTTGGTTCTCCACGT 60.812 55.000 0.00 0.00 44.22 4.49
2145 3935 1.385528 GTTGGTTGGTTCTCCACGTT 58.614 50.000 0.00 0.00 44.22 3.99
2146 3936 1.746787 GTTGGTTGGTTCTCCACGTTT 59.253 47.619 0.00 0.00 44.22 3.60
2147 3937 1.384525 TGGTTGGTTCTCCACGTTTG 58.615 50.000 0.00 0.00 44.22 2.93
2148 3938 0.030235 GGTTGGTTCTCCACGTTTGC 59.970 55.000 0.00 0.00 44.22 3.68
2149 3939 1.021968 GTTGGTTCTCCACGTTTGCT 58.978 50.000 0.00 0.00 44.22 3.91
2150 3940 2.215196 GTTGGTTCTCCACGTTTGCTA 58.785 47.619 0.00 0.00 44.22 3.49
2151 3941 2.812011 GTTGGTTCTCCACGTTTGCTAT 59.188 45.455 0.00 0.00 44.22 2.97
2152 3942 2.695359 TGGTTCTCCACGTTTGCTATC 58.305 47.619 0.00 0.00 39.03 2.08
2153 3943 2.037902 TGGTTCTCCACGTTTGCTATCA 59.962 45.455 0.00 0.00 39.03 2.15
2154 3944 3.071479 GGTTCTCCACGTTTGCTATCAA 58.929 45.455 0.00 0.00 0.00 2.57
2155 3945 3.120304 GGTTCTCCACGTTTGCTATCAAC 60.120 47.826 0.00 0.00 30.75 3.18
2156 3946 3.678056 TCTCCACGTTTGCTATCAACT 57.322 42.857 0.00 0.00 30.75 3.16
2157 3947 3.325870 TCTCCACGTTTGCTATCAACTG 58.674 45.455 0.00 0.00 30.75 3.16
2158 3948 3.006430 TCTCCACGTTTGCTATCAACTGA 59.994 43.478 0.00 0.00 30.75 3.41
2159 3949 3.734463 TCCACGTTTGCTATCAACTGAA 58.266 40.909 0.00 0.00 30.75 3.02
2160 3950 4.130857 TCCACGTTTGCTATCAACTGAAA 58.869 39.130 0.00 0.00 30.75 2.69
2161 3951 4.213270 TCCACGTTTGCTATCAACTGAAAG 59.787 41.667 0.00 0.00 42.29 2.62
2180 3970 8.092521 CTGAAAGTGTAATTCTTGTCATCAGT 57.907 34.615 0.00 0.00 29.18 3.41
2181 3971 8.450578 TGAAAGTGTAATTCTTGTCATCAGTT 57.549 30.769 0.00 0.00 0.00 3.16
2182 3972 9.554395 TGAAAGTGTAATTCTTGTCATCAGTTA 57.446 29.630 0.00 0.00 0.00 2.24
2185 3975 9.725019 AAGTGTAATTCTTGTCATCAGTTATCA 57.275 29.630 0.00 0.00 0.00 2.15
2186 3976 9.376075 AGTGTAATTCTTGTCATCAGTTATCAG 57.624 33.333 0.00 0.00 0.00 2.90
2187 3977 9.371136 GTGTAATTCTTGTCATCAGTTATCAGA 57.629 33.333 0.00 0.00 0.00 3.27
2188 3978 9.942850 TGTAATTCTTGTCATCAGTTATCAGAA 57.057 29.630 0.00 0.00 0.00 3.02
2191 3981 7.912056 TTCTTGTCATCAGTTATCAGAAAGG 57.088 36.000 0.00 0.00 0.00 3.11
2192 3982 7.009179 TCTTGTCATCAGTTATCAGAAAGGT 57.991 36.000 0.00 0.00 0.00 3.50
2193 3983 7.099764 TCTTGTCATCAGTTATCAGAAAGGTC 58.900 38.462 0.00 0.00 0.00 3.85
2194 3984 5.734720 TGTCATCAGTTATCAGAAAGGTCC 58.265 41.667 0.00 0.00 0.00 4.46
2195 3985 5.248248 TGTCATCAGTTATCAGAAAGGTCCA 59.752 40.000 0.00 0.00 0.00 4.02
2196 3986 6.173339 GTCATCAGTTATCAGAAAGGTCCAA 58.827 40.000 0.00 0.00 0.00 3.53
2197 3987 6.825721 GTCATCAGTTATCAGAAAGGTCCAAT 59.174 38.462 0.00 0.00 0.00 3.16
2198 3988 6.825213 TCATCAGTTATCAGAAAGGTCCAATG 59.175 38.462 0.00 0.00 0.00 2.82
2199 3989 4.943705 TCAGTTATCAGAAAGGTCCAATGC 59.056 41.667 0.00 0.00 0.00 3.56
2200 3990 4.946157 CAGTTATCAGAAAGGTCCAATGCT 59.054 41.667 0.00 0.00 0.00 3.79
2201 3991 6.070251 TCAGTTATCAGAAAGGTCCAATGCTA 60.070 38.462 0.00 0.00 0.00 3.49
2202 3992 6.037610 CAGTTATCAGAAAGGTCCAATGCTAC 59.962 42.308 0.00 0.00 0.00 3.58
2203 3993 4.851639 ATCAGAAAGGTCCAATGCTACT 57.148 40.909 0.00 0.00 0.00 2.57
2204 3994 4.207891 TCAGAAAGGTCCAATGCTACTC 57.792 45.455 0.00 0.00 0.00 2.59
2205 3995 3.840666 TCAGAAAGGTCCAATGCTACTCT 59.159 43.478 0.00 0.00 0.00 3.24
2206 3996 4.081420 TCAGAAAGGTCCAATGCTACTCTC 60.081 45.833 0.00 0.00 0.00 3.20
2207 3997 4.081198 CAGAAAGGTCCAATGCTACTCTCT 60.081 45.833 0.00 0.00 0.00 3.10
2208 3998 4.534103 AGAAAGGTCCAATGCTACTCTCTT 59.466 41.667 0.00 0.00 0.00 2.85
2209 3999 3.902881 AGGTCCAATGCTACTCTCTTG 57.097 47.619 0.00 0.00 0.00 3.02
2210 4000 3.177228 AGGTCCAATGCTACTCTCTTGT 58.823 45.455 0.00 0.00 0.00 3.16
2211 4001 4.353777 AGGTCCAATGCTACTCTCTTGTA 58.646 43.478 0.00 0.00 0.00 2.41
2212 4002 4.777896 AGGTCCAATGCTACTCTCTTGTAA 59.222 41.667 0.00 0.00 0.00 2.41
2213 4003 5.248477 AGGTCCAATGCTACTCTCTTGTAAA 59.752 40.000 0.00 0.00 0.00 2.01
2214 4004 5.351740 GGTCCAATGCTACTCTCTTGTAAAC 59.648 44.000 0.00 0.00 0.00 2.01
2215 4005 6.166982 GTCCAATGCTACTCTCTTGTAAACT 58.833 40.000 0.00 0.00 0.00 2.66
2216 4006 6.091441 GTCCAATGCTACTCTCTTGTAAACTG 59.909 42.308 0.00 0.00 0.00 3.16
2217 4007 5.163814 CCAATGCTACTCTCTTGTAAACTGC 60.164 44.000 0.00 0.00 0.00 4.40
2218 4008 3.926616 TGCTACTCTCTTGTAAACTGCC 58.073 45.455 0.00 0.00 0.00 4.85
2219 4009 3.323691 TGCTACTCTCTTGTAAACTGCCA 59.676 43.478 0.00 0.00 0.00 4.92
2220 4010 3.680458 GCTACTCTCTTGTAAACTGCCAC 59.320 47.826 0.00 0.00 0.00 5.01
2221 4011 2.755650 ACTCTCTTGTAAACTGCCACG 58.244 47.619 0.00 0.00 0.00 4.94
2222 4012 2.102588 ACTCTCTTGTAAACTGCCACGT 59.897 45.455 0.00 0.00 0.00 4.49
2223 4013 2.476619 CTCTCTTGTAAACTGCCACGTG 59.523 50.000 9.08 9.08 0.00 4.49
2224 4014 2.159014 TCTCTTGTAAACTGCCACGTGT 60.159 45.455 15.65 0.00 0.00 4.49
2225 4015 2.612212 CTCTTGTAAACTGCCACGTGTT 59.388 45.455 15.65 4.12 0.00 3.32
2226 4016 2.353269 TCTTGTAAACTGCCACGTGTTG 59.647 45.455 15.65 6.47 0.00 3.33
2236 4026 1.877637 CCACGTGTTGGTTGAGATCA 58.122 50.000 15.65 0.00 41.10 2.92
2237 4027 2.426522 CCACGTGTTGGTTGAGATCAT 58.573 47.619 15.65 0.00 41.10 2.45
2238 4028 3.595173 CCACGTGTTGGTTGAGATCATA 58.405 45.455 15.65 0.00 41.10 2.15
2239 4029 3.370978 CCACGTGTTGGTTGAGATCATAC 59.629 47.826 15.65 0.00 41.10 2.39
2240 4030 3.993736 CACGTGTTGGTTGAGATCATACA 59.006 43.478 7.58 0.00 0.00 2.29
2241 4031 4.450757 CACGTGTTGGTTGAGATCATACAA 59.549 41.667 7.58 0.00 0.00 2.41
2242 4032 5.122239 CACGTGTTGGTTGAGATCATACAAT 59.878 40.000 7.58 0.00 0.00 2.71
2243 4033 6.312672 CACGTGTTGGTTGAGATCATACAATA 59.687 38.462 7.58 0.00 0.00 1.90
2311 4101 6.513180 TCTCGTCTCAACTTGAAACACTATT 58.487 36.000 0.00 0.00 0.00 1.73
2312 4102 6.420903 TCTCGTCTCAACTTGAAACACTATTG 59.579 38.462 0.00 0.00 0.00 1.90
2408 4198 8.157476 AGTAATGTTCAAGTCAAGTAGTGGAAT 58.843 33.333 0.00 0.00 0.00 3.01
2420 4215 6.013725 TCAAGTAGTGGAATGTATCAGTTGGT 60.014 38.462 0.00 0.00 0.00 3.67
2421 4216 6.374417 AGTAGTGGAATGTATCAGTTGGTT 57.626 37.500 0.00 0.00 0.00 3.67
2479 4282 4.067192 TGTTGTCATCAGTCATCACCAAG 58.933 43.478 0.00 0.00 0.00 3.61
2621 4446 5.917541 TGACACAAGTTCGTCCTTTAATC 57.082 39.130 0.61 0.00 0.00 1.75
2624 4449 2.740447 ACAAGTTCGTCCTTTAATCGCC 59.260 45.455 0.00 0.00 0.00 5.54
2647 4472 2.398554 GCGCAGGATTTCAAGCCGA 61.399 57.895 0.30 0.00 40.07 5.54
2676 4504 0.528684 GGTGATGGAGAGTGCTACGC 60.529 60.000 0.00 0.00 0.00 4.42
2698 4526 2.559840 CAGGAGCGCTGCTGTTTG 59.440 61.111 40.76 23.40 42.98 2.93
2700 4528 4.410743 GGAGCGCTGCTGTTTGCC 62.411 66.667 22.85 6.72 39.88 4.52
2701 4529 3.360340 GAGCGCTGCTGTTTGCCT 61.360 61.111 18.48 0.00 39.88 4.75
2702 4530 3.606065 GAGCGCTGCTGTTTGCCTG 62.606 63.158 18.48 0.00 39.88 4.85
2703 4531 3.969802 GCGCTGCTGTTTGCCTGT 61.970 61.111 0.00 0.00 42.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.093354 TGTGATTAGCTAGAGTTTCAGTTCTG 58.907 38.462 0.00 0.00 0.00 3.02
19 20 4.261614 CGTGCCACTATGTGATTAGCTAGA 60.262 45.833 0.00 0.00 35.23 2.43
21 22 3.383505 ACGTGCCACTATGTGATTAGCTA 59.616 43.478 0.00 0.00 35.23 3.32
41 45 3.989705 TGATGTGCGAATCACTTAACG 57.010 42.857 0.00 0.00 45.81 3.18
51 55 2.717580 ACGAGTTAGTGATGTGCGAA 57.282 45.000 0.00 0.00 0.00 4.70
52 56 2.228103 AGAACGAGTTAGTGATGTGCGA 59.772 45.455 0.00 0.00 0.00 5.10
54 58 3.839293 AGAGAACGAGTTAGTGATGTGC 58.161 45.455 0.00 0.00 0.00 4.57
68 72 4.165779 GAGCAAAAGAGAGAGAGAGAACG 58.834 47.826 0.00 0.00 0.00 3.95
69 73 5.132897 TGAGCAAAAGAGAGAGAGAGAAC 57.867 43.478 0.00 0.00 0.00 3.01
71 75 6.663093 ACTTATGAGCAAAAGAGAGAGAGAGA 59.337 38.462 0.00 0.00 0.00 3.10
72 76 6.866480 ACTTATGAGCAAAAGAGAGAGAGAG 58.134 40.000 0.00 0.00 0.00 3.20
73 77 6.127479 GGACTTATGAGCAAAAGAGAGAGAGA 60.127 42.308 0.00 0.00 0.00 3.10
74 78 6.042143 GGACTTATGAGCAAAAGAGAGAGAG 58.958 44.000 0.00 0.00 0.00 3.20
75 79 5.481824 TGGACTTATGAGCAAAAGAGAGAGA 59.518 40.000 0.00 0.00 0.00 3.10
78 82 6.111382 TGATGGACTTATGAGCAAAAGAGAG 58.889 40.000 0.00 0.00 0.00 3.20
81 85 5.525012 CGATGATGGACTTATGAGCAAAAGA 59.475 40.000 0.00 0.00 0.00 2.52
98 102 7.061752 TCTAGTATACGTGATGTCGATGATG 57.938 40.000 0.00 0.00 34.70 3.07
115 121 9.520515 TCTTGCCTTGATTTCTTTTTCTAGTAT 57.479 29.630 0.00 0.00 0.00 2.12
116 122 8.918202 TCTTGCCTTGATTTCTTTTTCTAGTA 57.082 30.769 0.00 0.00 0.00 1.82
125 131 3.849527 AGGGTTCTTGCCTTGATTTCTT 58.150 40.909 0.00 0.00 0.00 2.52
127 133 4.589908 TCTAGGGTTCTTGCCTTGATTTC 58.410 43.478 0.00 0.00 0.00 2.17
132 138 3.634397 TGATCTAGGGTTCTTGCCTTG 57.366 47.619 0.00 0.00 0.00 3.61
145 155 7.504403 AGGACAAAGTACATGGATTGATCTAG 58.496 38.462 0.00 0.00 0.00 2.43
146 156 7.437713 AGGACAAAGTACATGGATTGATCTA 57.562 36.000 0.00 0.00 0.00 1.98
147 157 6.319048 AGGACAAAGTACATGGATTGATCT 57.681 37.500 0.00 0.00 0.00 2.75
148 158 8.153550 AGATAGGACAAAGTACATGGATTGATC 58.846 37.037 0.00 0.00 0.00 2.92
149 159 7.935755 CAGATAGGACAAAGTACATGGATTGAT 59.064 37.037 0.00 0.00 0.00 2.57
150 160 7.125659 TCAGATAGGACAAAGTACATGGATTGA 59.874 37.037 0.00 0.00 0.00 2.57
204 215 9.429359 AGTATATAGTTATGTTCTTGCTGATGC 57.571 33.333 0.00 0.00 40.20 3.91
226 237 9.917887 ACAAAGTATGAGGTAGTAGTGTAGTAT 57.082 33.333 0.00 0.00 0.00 2.12
227 238 9.388506 GACAAAGTATGAGGTAGTAGTGTAGTA 57.611 37.037 0.00 0.00 0.00 1.82
228 239 7.338957 GGACAAAGTATGAGGTAGTAGTGTAGT 59.661 40.741 0.00 0.00 0.00 2.73
236 247 3.438183 ACCGGACAAAGTATGAGGTAGT 58.562 45.455 9.46 0.00 34.75 2.73
241 252 5.411361 TCAAATCAACCGGACAAAGTATGAG 59.589 40.000 9.46 0.00 0.00 2.90
242 253 5.309638 TCAAATCAACCGGACAAAGTATGA 58.690 37.500 9.46 0.00 0.00 2.15
277 288 8.144478 TCAATCCTATCTGTCGGAATCTAAAAG 58.856 37.037 0.00 0.00 32.12 2.27
278 289 8.018537 TCAATCCTATCTGTCGGAATCTAAAA 57.981 34.615 0.00 0.00 32.12 1.52
279 290 7.597288 TCAATCCTATCTGTCGGAATCTAAA 57.403 36.000 0.00 0.00 32.12 1.85
280 291 7.782897 ATCAATCCTATCTGTCGGAATCTAA 57.217 36.000 0.00 0.00 32.12 2.10
291 302 9.947669 GTGAATCTTCAAAATCAATCCTATCTG 57.052 33.333 0.00 0.00 39.21 2.90
292 303 9.690913 TGTGAATCTTCAAAATCAATCCTATCT 57.309 29.630 0.00 0.00 39.21 1.98
303 314 9.950496 AGTGAGTACTATGTGAATCTTCAAAAT 57.050 29.630 0.00 0.00 35.52 1.82
331 343 5.580022 ACCCCTGCAAGAATATAACTGTTT 58.420 37.500 0.00 0.00 34.07 2.83
338 350 5.473273 TCTCCTAACCCCTGCAAGAATATA 58.527 41.667 0.00 0.00 34.07 0.86
339 351 4.307259 TCTCCTAACCCCTGCAAGAATAT 58.693 43.478 0.00 0.00 34.07 1.28
348 360 3.347216 CACACAATTCTCCTAACCCCTG 58.653 50.000 0.00 0.00 0.00 4.45
350 362 2.041216 ACCACACAATTCTCCTAACCCC 59.959 50.000 0.00 0.00 0.00 4.95
352 364 6.887626 TTTTACCACACAATTCTCCTAACC 57.112 37.500 0.00 0.00 0.00 2.85
389 405 9.445878 CCTATAATGTTTCATAGTGCTCATGAT 57.554 33.333 0.00 0.00 32.63 2.45
395 411 9.105844 AGGTATCCTATAATGTTTCATAGTGCT 57.894 33.333 0.00 0.00 28.47 4.40
413 429 8.960064 AGGAAATAAATGGTCATTAGGTATCCT 58.040 33.333 0.00 4.91 37.71 3.24
416 432 9.588096 GGAAGGAAATAAATGGTCATTAGGTAT 57.412 33.333 0.00 0.00 0.00 2.73
417 433 8.787818 AGGAAGGAAATAAATGGTCATTAGGTA 58.212 33.333 0.00 0.00 0.00 3.08
418 434 7.652554 AGGAAGGAAATAAATGGTCATTAGGT 58.347 34.615 0.00 0.00 0.00 3.08
427 444 8.633561 GGACATCTAAAGGAAGGAAATAAATGG 58.366 37.037 0.00 0.00 0.00 3.16
428 445 9.189156 TGGACATCTAAAGGAAGGAAATAAATG 57.811 33.333 0.00 0.00 0.00 2.32
433 450 5.186198 CGTGGACATCTAAAGGAAGGAAAT 58.814 41.667 0.00 0.00 0.00 2.17
442 459 8.425577 AGATTGAATTACGTGGACATCTAAAG 57.574 34.615 0.00 0.00 0.00 1.85
445 462 7.822334 ACAAAGATTGAATTACGTGGACATCTA 59.178 33.333 0.00 0.00 0.00 1.98
455 476 9.993881 GTCATTGAAAACAAAGATTGAATTACG 57.006 29.630 0.00 0.00 0.00 3.18
464 485 5.835280 AGAGGTGGTCATTGAAAACAAAGAT 59.165 36.000 0.00 0.00 0.00 2.40
465 486 5.200483 AGAGGTGGTCATTGAAAACAAAGA 58.800 37.500 0.00 0.00 0.00 2.52
468 489 6.126409 AGTAAGAGGTGGTCATTGAAAACAA 58.874 36.000 0.00 0.00 0.00 2.83
470 491 6.935208 AGTAGTAAGAGGTGGTCATTGAAAAC 59.065 38.462 0.00 0.00 0.00 2.43
473 494 5.542635 ACAGTAGTAAGAGGTGGTCATTGAA 59.457 40.000 0.00 0.00 0.00 2.69
480 501 2.890814 AGCACAGTAGTAAGAGGTGGT 58.109 47.619 0.00 0.00 35.58 4.16
520 546 5.147162 CAGGTTTCAGTTTTCGTCAATAGC 58.853 41.667 0.00 0.00 0.00 2.97
525 551 2.096819 GCACAGGTTTCAGTTTTCGTCA 59.903 45.455 0.00 0.00 0.00 4.35
526 552 2.540973 GGCACAGGTTTCAGTTTTCGTC 60.541 50.000 0.00 0.00 0.00 4.20
527 553 1.404035 GGCACAGGTTTCAGTTTTCGT 59.596 47.619 0.00 0.00 0.00 3.85
528 554 1.403679 TGGCACAGGTTTCAGTTTTCG 59.596 47.619 0.00 0.00 0.00 3.46
534 560 4.326504 AAGAATTTGGCACAGGTTTCAG 57.673 40.909 0.00 0.00 42.39 3.02
535 561 4.751767 AAAGAATTTGGCACAGGTTTCA 57.248 36.364 0.00 0.00 42.39 2.69
536 562 5.691754 CAGTAAAGAATTTGGCACAGGTTTC 59.308 40.000 0.00 0.00 42.39 2.78
537 563 5.600696 CAGTAAAGAATTTGGCACAGGTTT 58.399 37.500 0.00 0.00 42.39 3.27
540 566 3.256631 AGCAGTAAAGAATTTGGCACAGG 59.743 43.478 0.00 0.00 42.39 4.00
542 568 4.458989 CCTAGCAGTAAAGAATTTGGCACA 59.541 41.667 0.00 0.00 39.63 4.57
543 569 4.700213 TCCTAGCAGTAAAGAATTTGGCAC 59.300 41.667 0.00 0.00 39.63 5.01
545 571 4.336713 CCTCCTAGCAGTAAAGAATTTGGC 59.663 45.833 0.00 0.00 39.63 4.52
551 577 4.900054 GGATACCCTCCTAGCAGTAAAGAA 59.100 45.833 0.00 0.00 41.29 2.52
571 597 2.684881 CTCGCTTGTGCCATTTTAGGAT 59.315 45.455 0.00 0.00 35.36 3.24
588 614 2.028165 GCGTTGTTGTCTAATCTCTCGC 59.972 50.000 0.00 0.00 0.00 5.03
590 616 5.786401 AATGCGTTGTTGTCTAATCTCTC 57.214 39.130 0.00 0.00 0.00 3.20
614 640 5.360714 AGCATTGTGGAGTGAGAAAGAAAAA 59.639 36.000 0.00 0.00 0.00 1.94
617 643 4.090761 AGCATTGTGGAGTGAGAAAGAA 57.909 40.909 0.00 0.00 0.00 2.52
623 649 2.164422 TCGAGTAGCATTGTGGAGTGAG 59.836 50.000 0.00 0.00 0.00 3.51
673 706 6.202762 GCTGACACGATGATGGACAAATTATA 59.797 38.462 0.00 0.00 0.00 0.98
676 709 3.127548 GCTGACACGATGATGGACAAATT 59.872 43.478 0.00 0.00 0.00 1.82
734 1080 8.587608 TCAATTCTATGCATCAACTTTCCTTTT 58.412 29.630 0.19 0.00 0.00 2.27
744 1090 8.768019 CGACTAATCTTCAATTCTATGCATCAA 58.232 33.333 0.19 0.00 0.00 2.57
745 1091 7.095481 GCGACTAATCTTCAATTCTATGCATCA 60.095 37.037 0.19 0.00 0.00 3.07
747 1093 6.933521 AGCGACTAATCTTCAATTCTATGCAT 59.066 34.615 3.79 3.79 0.00 3.96
751 1795 9.817809 TTTACAGCGACTAATCTTCAATTCTAT 57.182 29.630 0.00 0.00 0.00 1.98
757 1801 6.148645 TGCATTTTACAGCGACTAATCTTCAA 59.851 34.615 0.00 0.00 0.00 2.69
762 1806 7.042051 TCCTTATGCATTTTACAGCGACTAATC 60.042 37.037 3.54 0.00 0.00 1.75
769 2549 5.207768 GTCATCCTTATGCATTTTACAGCG 58.792 41.667 3.54 0.00 32.76 5.18
770 2550 5.973565 GTGTCATCCTTATGCATTTTACAGC 59.026 40.000 3.54 0.00 32.76 4.40
777 2557 4.508551 TCCTGTGTCATCCTTATGCATT 57.491 40.909 3.54 0.00 32.76 3.56
789 2569 6.126863 AGAATCCAACTATTTCCTGTGTCA 57.873 37.500 0.00 0.00 0.00 3.58
792 2572 7.452880 TCAAAGAATCCAACTATTTCCTGTG 57.547 36.000 0.00 0.00 0.00 3.66
814 2594 7.997223 AGAGCAGGAATTTCTCATGATTATTCA 59.003 33.333 18.49 0.00 38.11 2.57
818 2598 9.857656 AATTAGAGCAGGAATTTCTCATGATTA 57.142 29.630 0.00 0.00 38.11 1.75
819 2599 8.763984 AATTAGAGCAGGAATTTCTCATGATT 57.236 30.769 0.00 0.00 38.11 2.57
839 2619 9.820229 TTTCTTGCACGTACTAATCAAAATTAG 57.180 29.630 0.00 4.11 46.62 1.73
843 2623 7.429920 GTGTTTTCTTGCACGTACTAATCAAAA 59.570 33.333 0.00 0.00 0.00 2.44
847 2627 6.224420 AGTGTTTTCTTGCACGTACTAATC 57.776 37.500 0.00 0.00 40.26 1.75
848 2628 5.107607 CGAGTGTTTTCTTGCACGTACTAAT 60.108 40.000 0.00 0.00 40.26 1.73
849 2629 4.207635 CGAGTGTTTTCTTGCACGTACTAA 59.792 41.667 0.00 0.00 40.26 2.24
851 2631 2.538449 CGAGTGTTTTCTTGCACGTACT 59.462 45.455 0.00 0.00 40.26 2.73
852 2632 2.283351 ACGAGTGTTTTCTTGCACGTAC 59.717 45.455 0.00 0.00 40.26 3.67
877 2657 1.945662 GCAAGCTGTGGCAAACGTG 60.946 57.895 0.00 0.00 41.70 4.49
878 2658 2.340453 CTGCAAGCTGTGGCAAACGT 62.340 55.000 8.98 0.00 39.93 3.99
879 2659 1.659335 CTGCAAGCTGTGGCAAACG 60.659 57.895 8.98 0.00 39.93 3.60
880 2660 4.331356 CTGCAAGCTGTGGCAAAC 57.669 55.556 8.98 0.00 39.93 2.93
895 2675 3.281727 TGGGGCTTTTATAGTGAGCTG 57.718 47.619 0.00 0.00 36.66 4.24
920 2701 1.542628 TGGTGTTATGGCCTGGGGA 60.543 57.895 3.32 0.00 0.00 4.81
947 2728 3.139077 GTCTTTGACTTACCTGGTGTGG 58.861 50.000 10.23 1.85 0.00 4.17
954 2741 3.071167 GGTGTCTGGTCTTTGACTTACCT 59.929 47.826 0.00 0.00 34.23 3.08
955 2742 3.181458 TGGTGTCTGGTCTTTGACTTACC 60.181 47.826 0.00 0.00 34.57 2.85
959 2746 2.103263 GTCTGGTGTCTGGTCTTTGACT 59.897 50.000 0.00 0.00 34.57 3.41
960 2747 2.484889 GTCTGGTGTCTGGTCTTTGAC 58.515 52.381 0.00 0.00 0.00 3.18
961 2748 1.416401 GGTCTGGTGTCTGGTCTTTGA 59.584 52.381 0.00 0.00 0.00 2.69
963 2750 1.141053 GTGGTCTGGTGTCTGGTCTTT 59.859 52.381 0.00 0.00 0.00 2.52
964 2751 0.759346 GTGGTCTGGTGTCTGGTCTT 59.241 55.000 0.00 0.00 0.00 3.01
965 2752 0.105453 AGTGGTCTGGTGTCTGGTCT 60.105 55.000 0.00 0.00 0.00 3.85
966 2753 0.759346 AAGTGGTCTGGTGTCTGGTC 59.241 55.000 0.00 0.00 0.00 4.02
967 2754 0.759346 GAAGTGGTCTGGTGTCTGGT 59.241 55.000 0.00 0.00 0.00 4.00
968 2755 0.758734 TGAAGTGGTCTGGTGTCTGG 59.241 55.000 0.00 0.00 0.00 3.86
969 2756 1.414181 AGTGAAGTGGTCTGGTGTCTG 59.586 52.381 0.00 0.00 0.00 3.51
970 2757 1.689273 GAGTGAAGTGGTCTGGTGTCT 59.311 52.381 0.00 0.00 0.00 3.41
971 2758 1.270358 GGAGTGAAGTGGTCTGGTGTC 60.270 57.143 0.00 0.00 0.00 3.67
972 2759 0.759346 GGAGTGAAGTGGTCTGGTGT 59.241 55.000 0.00 0.00 0.00 4.16
973 2760 0.758734 TGGAGTGAAGTGGTCTGGTG 59.241 55.000 0.00 0.00 0.00 4.17
994 2784 1.936547 GAGAGTCATCGCCATTTGGAC 59.063 52.381 0.00 0.00 37.39 4.02
995 2785 1.471501 CGAGAGTCATCGCCATTTGGA 60.472 52.381 0.00 0.00 35.66 3.53
1131 2921 0.614979 TGCCCACAGAGAGGTAGACC 60.615 60.000 0.00 0.00 0.00 3.85
1237 3027 2.158534 AGTCTGCTATCTCGGACAGGAT 60.159 50.000 5.65 0.00 43.14 3.24
1254 3044 4.169068 AGGACAGGTGTGGATAGATAGTCT 59.831 45.833 0.00 0.00 0.00 3.24
1353 3143 1.485480 CCATGGAGCAGAGTGAGTGAT 59.515 52.381 5.56 0.00 0.00 3.06
1465 3255 2.027625 GACGGCGACAGAAGGGTTG 61.028 63.158 16.62 0.00 0.00 3.77
1556 3346 5.594725 GGAGATCTCTGTATGTCCACACTTA 59.405 44.000 21.81 0.00 38.79 2.24
1713 3503 4.832590 ACCTTAGTAAGTCGATGATCCG 57.167 45.455 9.05 0.00 0.00 4.18
1778 3568 8.662141 GTTCCGCTACAATACTTAATTTTGAGA 58.338 33.333 0.00 0.00 0.00 3.27
1785 3575 6.509656 TCGATGTTCCGCTACAATACTTAAT 58.490 36.000 0.00 0.00 0.00 1.40
1786 3576 5.893687 TCGATGTTCCGCTACAATACTTAA 58.106 37.500 0.00 0.00 0.00 1.85
1787 3577 5.066893 ACTCGATGTTCCGCTACAATACTTA 59.933 40.000 0.00 0.00 0.00 2.24
1788 3578 4.142227 ACTCGATGTTCCGCTACAATACTT 60.142 41.667 0.00 0.00 0.00 2.24
1795 3585 0.179134 AGCACTCGATGTTCCGCTAC 60.179 55.000 0.00 0.00 0.00 3.58
1798 3588 0.517316 AAAAGCACTCGATGTTCCGC 59.483 50.000 0.00 0.00 0.00 5.54
1835 3625 8.749841 ACTTAACATATACTCGCATCATCTTC 57.250 34.615 0.00 0.00 0.00 2.87
1836 3626 8.360390 TGACTTAACATATACTCGCATCATCTT 58.640 33.333 0.00 0.00 0.00 2.40
1837 3627 7.886338 TGACTTAACATATACTCGCATCATCT 58.114 34.615 0.00 0.00 0.00 2.90
1838 3628 8.520835 TTGACTTAACATATACTCGCATCATC 57.479 34.615 0.00 0.00 0.00 2.92
1839 3629 8.144478 ACTTGACTTAACATATACTCGCATCAT 58.856 33.333 0.00 0.00 0.00 2.45
1840 3630 7.489160 ACTTGACTTAACATATACTCGCATCA 58.511 34.615 0.00 0.00 0.00 3.07
1841 3631 7.932120 ACTTGACTTAACATATACTCGCATC 57.068 36.000 0.00 0.00 0.00 3.91
1842 3632 8.410912 TGTACTTGACTTAACATATACTCGCAT 58.589 33.333 0.00 0.00 0.00 4.73
1843 3633 7.764331 TGTACTTGACTTAACATATACTCGCA 58.236 34.615 0.00 0.00 0.00 5.10
1844 3634 7.914346 ACTGTACTTGACTTAACATATACTCGC 59.086 37.037 0.00 0.00 0.00 5.03
1864 3654 4.198530 GGACAGAGGGAGTACTACTGTAC 58.801 52.174 17.94 16.05 46.89 2.90
1865 3655 3.201708 GGGACAGAGGGAGTACTACTGTA 59.798 52.174 17.94 0.00 41.01 2.74
1866 3656 2.025131 GGGACAGAGGGAGTACTACTGT 60.025 54.545 17.95 17.95 43.10 3.55
1867 3657 2.025226 TGGGACAGAGGGAGTACTACTG 60.025 54.545 4.77 10.44 35.14 2.74
1868 3658 2.285707 TGGGACAGAGGGAGTACTACT 58.714 52.381 4.77 1.85 0.00 2.57
1869 3659 2.822707 TGGGACAGAGGGAGTACTAC 57.177 55.000 0.00 0.00 0.00 2.73
1883 3673 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
1884 3674 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
1885 3675 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
1896 3686 9.485206 ACATTAGTATAGTGTCAAAAACGTTCT 57.515 29.630 0.00 0.00 36.80 3.01
1922 3712 9.557338 CGTCCCATAATATAAAAACGTTTTTGA 57.443 29.630 36.92 27.73 40.33 2.69
1923 3713 8.800031 CCGTCCCATAATATAAAAACGTTTTTG 58.200 33.333 36.92 24.07 40.33 2.44
1924 3714 8.738106 TCCGTCCCATAATATAAAAACGTTTTT 58.262 29.630 33.94 33.94 42.51 1.94
1925 3715 8.278729 TCCGTCCCATAATATAAAAACGTTTT 57.721 30.769 20.26 20.26 0.00 2.43
1926 3716 7.012610 CCTCCGTCCCATAATATAAAAACGTTT 59.987 37.037 7.96 7.96 0.00 3.60
1927 3717 6.484308 CCTCCGTCCCATAATATAAAAACGTT 59.516 38.462 0.00 0.00 0.00 3.99
1928 3718 5.993441 CCTCCGTCCCATAATATAAAAACGT 59.007 40.000 0.00 0.00 0.00 3.99
1929 3719 5.410439 CCCTCCGTCCCATAATATAAAAACG 59.590 44.000 0.00 0.00 0.00 3.60
1930 3720 6.536447 TCCCTCCGTCCCATAATATAAAAAC 58.464 40.000 0.00 0.00 0.00 2.43
1931 3721 6.330778 ACTCCCTCCGTCCCATAATATAAAAA 59.669 38.462 0.00 0.00 0.00 1.94
1932 3722 5.847817 ACTCCCTCCGTCCCATAATATAAAA 59.152 40.000 0.00 0.00 0.00 1.52
1933 3723 5.408824 ACTCCCTCCGTCCCATAATATAAA 58.591 41.667 0.00 0.00 0.00 1.40
1934 3724 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
1935 3725 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
1936 3726 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
1937 3727 3.659195 TCTACTCCCTCCGTCCCATAATA 59.341 47.826 0.00 0.00 0.00 0.98
1938 3728 2.449730 TCTACTCCCTCCGTCCCATAAT 59.550 50.000 0.00 0.00 0.00 1.28
1939 3729 1.854939 TCTACTCCCTCCGTCCCATAA 59.145 52.381 0.00 0.00 0.00 1.90
1940 3730 1.526315 TCTACTCCCTCCGTCCCATA 58.474 55.000 0.00 0.00 0.00 2.74
1941 3731 0.635009 TTCTACTCCCTCCGTCCCAT 59.365 55.000 0.00 0.00 0.00 4.00
1942 3732 0.635009 ATTCTACTCCCTCCGTCCCA 59.365 55.000 0.00 0.00 0.00 4.37
1943 3733 1.790818 AATTCTACTCCCTCCGTCCC 58.209 55.000 0.00 0.00 0.00 4.46
1944 3734 4.587684 TGATAAATTCTACTCCCTCCGTCC 59.412 45.833 0.00 0.00 0.00 4.79
1945 3735 5.302313 ACTGATAAATTCTACTCCCTCCGTC 59.698 44.000 0.00 0.00 0.00 4.79
1946 3736 5.209659 ACTGATAAATTCTACTCCCTCCGT 58.790 41.667 0.00 0.00 0.00 4.69
1947 3737 5.563085 CGACTGATAAATTCTACTCCCTCCG 60.563 48.000 0.00 0.00 0.00 4.63
1948 3738 5.279056 CCGACTGATAAATTCTACTCCCTCC 60.279 48.000 0.00 0.00 0.00 4.30
1949 3739 5.302313 ACCGACTGATAAATTCTACTCCCTC 59.698 44.000 0.00 0.00 0.00 4.30
1950 3740 5.209659 ACCGACTGATAAATTCTACTCCCT 58.790 41.667 0.00 0.00 0.00 4.20
1951 3741 5.532664 ACCGACTGATAAATTCTACTCCC 57.467 43.478 0.00 0.00 0.00 4.30
1952 3742 5.753921 CCAACCGACTGATAAATTCTACTCC 59.246 44.000 0.00 0.00 0.00 3.85
1953 3743 6.338937 ACCAACCGACTGATAAATTCTACTC 58.661 40.000 0.00 0.00 0.00 2.59
1954 3744 6.295719 ACCAACCGACTGATAAATTCTACT 57.704 37.500 0.00 0.00 0.00 2.57
1955 3745 6.817140 AGAACCAACCGACTGATAAATTCTAC 59.183 38.462 0.00 0.00 0.00 2.59
1956 3746 6.942976 AGAACCAACCGACTGATAAATTCTA 58.057 36.000 0.00 0.00 0.00 2.10
1957 3747 5.805728 AGAACCAACCGACTGATAAATTCT 58.194 37.500 0.00 0.00 0.00 2.40
1958 3748 5.064834 GGAGAACCAACCGACTGATAAATTC 59.935 44.000 0.00 0.00 35.97 2.17
1959 3749 4.941873 GGAGAACCAACCGACTGATAAATT 59.058 41.667 0.00 0.00 35.97 1.82
1960 3750 4.514401 GGAGAACCAACCGACTGATAAAT 58.486 43.478 0.00 0.00 35.97 1.40
1961 3751 3.934068 GGAGAACCAACCGACTGATAAA 58.066 45.455 0.00 0.00 35.97 1.40
1962 3752 3.604875 GGAGAACCAACCGACTGATAA 57.395 47.619 0.00 0.00 35.97 1.75
1971 3761 1.385528 ACAAACACGGAGAACCAACC 58.614 50.000 0.00 0.00 35.59 3.77
1972 3762 4.273969 TGATAACAAACACGGAGAACCAAC 59.726 41.667 0.00 0.00 35.59 3.77
1973 3763 4.452825 TGATAACAAACACGGAGAACCAA 58.547 39.130 0.00 0.00 35.59 3.67
1974 3764 4.074627 TGATAACAAACACGGAGAACCA 57.925 40.909 0.00 0.00 35.59 3.67
1975 3765 4.514066 AGTTGATAACAAACACGGAGAACC 59.486 41.667 0.00 0.00 37.77 3.62
1976 3766 5.235616 TCAGTTGATAACAAACACGGAGAAC 59.764 40.000 0.00 0.00 37.77 3.01
1977 3767 5.361427 TCAGTTGATAACAAACACGGAGAA 58.639 37.500 0.00 0.00 37.77 2.87
1978 3768 4.951254 TCAGTTGATAACAAACACGGAGA 58.049 39.130 0.00 0.00 37.77 3.71
1979 3769 5.666969 TTCAGTTGATAACAAACACGGAG 57.333 39.130 0.00 0.00 37.77 4.63
1980 3770 5.529430 ACATTCAGTTGATAACAAACACGGA 59.471 36.000 0.00 0.00 37.77 4.69
1981 3771 5.624900 CACATTCAGTTGATAACAAACACGG 59.375 40.000 0.00 0.00 37.77 4.94
1982 3772 6.198687 ACACATTCAGTTGATAACAAACACG 58.801 36.000 0.00 0.00 37.77 4.49
1983 3773 9.677567 ATTACACATTCAGTTGATAACAAACAC 57.322 29.630 0.00 0.00 37.77 3.32
1988 3778 9.676195 CAACAATTACACATTCAGTTGATAACA 57.324 29.630 0.00 0.00 37.62 2.41
1989 3779 9.677567 ACAACAATTACACATTCAGTTGATAAC 57.322 29.630 9.09 0.00 38.48 1.89
1990 3780 9.891828 GACAACAATTACACATTCAGTTGATAA 57.108 29.630 9.09 0.00 38.48 1.75
1991 3781 9.061435 TGACAACAATTACACATTCAGTTGATA 57.939 29.630 9.09 0.00 38.48 2.15
1992 3782 7.939782 TGACAACAATTACACATTCAGTTGAT 58.060 30.769 9.09 0.00 38.48 2.57
1993 3783 7.326968 TGACAACAATTACACATTCAGTTGA 57.673 32.000 9.09 0.00 38.48 3.18
1994 3784 7.861872 TGATGACAACAATTACACATTCAGTTG 59.138 33.333 0.00 0.00 40.31 3.16
1995 3785 7.939782 TGATGACAACAATTACACATTCAGTT 58.060 30.769 0.00 0.00 0.00 3.16
1996 3786 7.229306 ACTGATGACAACAATTACACATTCAGT 59.771 33.333 0.00 0.00 0.00 3.41
1997 3787 7.587629 ACTGATGACAACAATTACACATTCAG 58.412 34.615 0.00 0.00 0.00 3.02
1998 3788 7.509141 ACTGATGACAACAATTACACATTCA 57.491 32.000 0.00 0.00 0.00 2.57
2001 3791 9.230122 TGATAACTGATGACAACAATTACACAT 57.770 29.630 0.00 0.00 0.00 3.21
2002 3792 8.503196 GTGATAACTGATGACAACAATTACACA 58.497 33.333 11.15 4.46 0.00 3.72
2003 3793 8.503196 TGTGATAACTGATGACAACAATTACAC 58.497 33.333 10.04 10.04 27.55 2.90
2004 3794 8.614469 TGTGATAACTGATGACAACAATTACA 57.386 30.769 0.00 0.00 27.55 2.41
2005 3795 9.891828 TTTGTGATAACTGATGACAACAATTAC 57.108 29.630 0.00 0.00 40.79 1.89
2007 3797 7.596248 GCTTTGTGATAACTGATGACAACAATT 59.404 33.333 0.00 0.00 40.79 2.32
2008 3798 7.040201 AGCTTTGTGATAACTGATGACAACAAT 60.040 33.333 0.00 0.00 40.79 2.71
2009 3799 6.262944 AGCTTTGTGATAACTGATGACAACAA 59.737 34.615 0.00 0.00 40.79 2.83
2010 3800 5.764686 AGCTTTGTGATAACTGATGACAACA 59.235 36.000 0.00 0.00 40.79 3.33
2011 3801 6.246420 AGCTTTGTGATAACTGATGACAAC 57.754 37.500 0.00 0.00 40.79 3.32
2012 3802 5.412594 GGAGCTTTGTGATAACTGATGACAA 59.587 40.000 0.00 0.00 39.54 3.18
2013 3803 4.937620 GGAGCTTTGTGATAACTGATGACA 59.062 41.667 0.00 0.00 28.71 3.58
2014 3804 4.937620 TGGAGCTTTGTGATAACTGATGAC 59.062 41.667 0.00 0.00 0.00 3.06
2015 3805 5.164620 TGGAGCTTTGTGATAACTGATGA 57.835 39.130 0.00 0.00 0.00 2.92
2016 3806 5.885230 TTGGAGCTTTGTGATAACTGATG 57.115 39.130 0.00 0.00 0.00 3.07
2017 3807 5.163581 GCATTGGAGCTTTGTGATAACTGAT 60.164 40.000 0.00 0.00 0.00 2.90
2018 3808 4.156556 GCATTGGAGCTTTGTGATAACTGA 59.843 41.667 0.00 0.00 0.00 3.41
2019 3809 4.157289 AGCATTGGAGCTTTGTGATAACTG 59.843 41.667 0.00 0.00 43.70 3.16
2020 3810 4.338879 AGCATTGGAGCTTTGTGATAACT 58.661 39.130 0.00 0.00 43.70 2.24
2021 3811 4.708726 AGCATTGGAGCTTTGTGATAAC 57.291 40.909 0.00 0.00 43.70 1.89
2022 3812 6.238456 CGATTAGCATTGGAGCTTTGTGATAA 60.238 38.462 0.00 0.00 43.70 1.75
2023 3813 5.237127 CGATTAGCATTGGAGCTTTGTGATA 59.763 40.000 0.00 0.00 43.70 2.15
2024 3814 4.036027 CGATTAGCATTGGAGCTTTGTGAT 59.964 41.667 0.00 0.00 43.70 3.06
2025 3815 3.374988 CGATTAGCATTGGAGCTTTGTGA 59.625 43.478 0.00 0.00 43.70 3.58
2026 3816 3.374988 TCGATTAGCATTGGAGCTTTGTG 59.625 43.478 0.00 0.00 43.70 3.33
2027 3817 3.609853 TCGATTAGCATTGGAGCTTTGT 58.390 40.909 0.00 0.00 43.70 2.83
2028 3818 3.624861 ACTCGATTAGCATTGGAGCTTTG 59.375 43.478 0.00 0.00 43.70 2.77
2029 3819 3.624861 CACTCGATTAGCATTGGAGCTTT 59.375 43.478 0.00 0.00 43.70 3.51
2030 3820 3.201290 CACTCGATTAGCATTGGAGCTT 58.799 45.455 0.00 0.00 43.70 3.74
2032 3822 1.262683 GCACTCGATTAGCATTGGAGC 59.737 52.381 0.00 0.00 0.00 4.70
2033 3823 2.831333 AGCACTCGATTAGCATTGGAG 58.169 47.619 6.64 0.00 0.00 3.86
2034 3824 2.988010 AGCACTCGATTAGCATTGGA 57.012 45.000 6.64 0.00 0.00 3.53
2035 3825 4.100529 CAAAAGCACTCGATTAGCATTGG 58.899 43.478 6.64 0.00 0.00 3.16
2036 3826 4.726416 ACAAAAGCACTCGATTAGCATTG 58.274 39.130 14.70 14.70 35.13 2.82
2037 3827 5.163754 GGTACAAAAGCACTCGATTAGCATT 60.164 40.000 0.00 0.00 0.00 3.56
2038 3828 4.332819 GGTACAAAAGCACTCGATTAGCAT 59.667 41.667 0.00 0.00 0.00 3.79
2039 3829 3.682858 GGTACAAAAGCACTCGATTAGCA 59.317 43.478 0.00 0.00 0.00 3.49
2040 3830 3.682858 TGGTACAAAAGCACTCGATTAGC 59.317 43.478 0.00 0.00 31.92 3.09
2061 3851 5.183713 TGCATCCTCTTCTACCAATTTGTTG 59.816 40.000 0.00 0.00 0.00 3.33
2062 3852 5.324409 TGCATCCTCTTCTACCAATTTGTT 58.676 37.500 0.00 0.00 0.00 2.83
2063 3853 4.922206 TGCATCCTCTTCTACCAATTTGT 58.078 39.130 0.00 0.00 0.00 2.83
2064 3854 5.416952 ACTTGCATCCTCTTCTACCAATTTG 59.583 40.000 0.00 0.00 0.00 2.32
2065 3855 5.574188 ACTTGCATCCTCTTCTACCAATTT 58.426 37.500 0.00 0.00 0.00 1.82
2066 3856 5.184892 ACTTGCATCCTCTTCTACCAATT 57.815 39.130 0.00 0.00 0.00 2.32
2067 3857 4.851639 ACTTGCATCCTCTTCTACCAAT 57.148 40.909 0.00 0.00 0.00 3.16
2068 3858 5.957771 ATACTTGCATCCTCTTCTACCAA 57.042 39.130 0.00 0.00 0.00 3.67
2069 3859 6.554982 ACATATACTTGCATCCTCTTCTACCA 59.445 38.462 0.00 0.00 0.00 3.25
2070 3860 6.998802 ACATATACTTGCATCCTCTTCTACC 58.001 40.000 0.00 0.00 0.00 3.18
2071 3861 9.982651 TTAACATATACTTGCATCCTCTTCTAC 57.017 33.333 0.00 0.00 0.00 2.59
2073 3863 8.709308 ACTTAACATATACTTGCATCCTCTTCT 58.291 33.333 0.00 0.00 0.00 2.85
2074 3864 8.894768 ACTTAACATATACTTGCATCCTCTTC 57.105 34.615 0.00 0.00 0.00 2.87
2075 3865 8.486210 TGACTTAACATATACTTGCATCCTCTT 58.514 33.333 0.00 0.00 0.00 2.85
2076 3866 8.023021 TGACTTAACATATACTTGCATCCTCT 57.977 34.615 0.00 0.00 0.00 3.69
2077 3867 8.662781 TTGACTTAACATATACTTGCATCCTC 57.337 34.615 0.00 0.00 0.00 3.71
2078 3868 9.632638 ATTTGACTTAACATATACTTGCATCCT 57.367 29.630 0.00 0.00 0.00 3.24
2104 3894 8.627403 CCAACGGATAAATTCTAGACTACTGTA 58.373 37.037 0.00 0.00 0.00 2.74
2105 3895 7.123847 ACCAACGGATAAATTCTAGACTACTGT 59.876 37.037 0.00 0.00 0.00 3.55
2106 3896 7.490000 ACCAACGGATAAATTCTAGACTACTG 58.510 38.462 0.00 0.00 0.00 2.74
2107 3897 7.657023 ACCAACGGATAAATTCTAGACTACT 57.343 36.000 0.00 0.00 0.00 2.57
2108 3898 7.224167 CCAACCAACGGATAAATTCTAGACTAC 59.776 40.741 0.00 0.00 0.00 2.73
2109 3899 7.093201 ACCAACCAACGGATAAATTCTAGACTA 60.093 37.037 0.00 0.00 0.00 2.59
2110 3900 6.113411 CCAACCAACGGATAAATTCTAGACT 58.887 40.000 0.00 0.00 0.00 3.24
2111 3901 5.878669 ACCAACCAACGGATAAATTCTAGAC 59.121 40.000 0.00 0.00 0.00 2.59
2112 3902 6.057321 ACCAACCAACGGATAAATTCTAGA 57.943 37.500 0.00 0.00 0.00 2.43
2113 3903 6.598064 AGAACCAACCAACGGATAAATTCTAG 59.402 38.462 0.00 0.00 0.00 2.43
2114 3904 6.478129 AGAACCAACCAACGGATAAATTCTA 58.522 36.000 0.00 0.00 0.00 2.10
2115 3905 5.321927 AGAACCAACCAACGGATAAATTCT 58.678 37.500 0.00 0.00 0.00 2.40
2116 3906 5.392703 GGAGAACCAACCAACGGATAAATTC 60.393 44.000 0.00 0.00 35.97 2.17
2117 3907 4.461431 GGAGAACCAACCAACGGATAAATT 59.539 41.667 0.00 0.00 35.97 1.82
2118 3908 4.014406 GGAGAACCAACCAACGGATAAAT 58.986 43.478 0.00 0.00 35.97 1.40
2119 3909 3.181442 TGGAGAACCAACCAACGGATAAA 60.181 43.478 0.00 0.00 43.91 1.40
2120 3910 2.372504 TGGAGAACCAACCAACGGATAA 59.627 45.455 0.00 0.00 43.91 1.75
2121 3911 1.979308 TGGAGAACCAACCAACGGATA 59.021 47.619 0.00 0.00 43.91 2.59
2122 3912 0.768622 TGGAGAACCAACCAACGGAT 59.231 50.000 0.00 0.00 43.91 4.18
2123 3913 2.222885 TGGAGAACCAACCAACGGA 58.777 52.632 0.00 0.00 43.91 4.69
2124 3914 4.889807 TGGAGAACCAACCAACGG 57.110 55.556 0.00 0.00 43.91 4.44
2130 3920 8.898243 GTTGATAGCAAACGTGGAGAACCAAC 62.898 46.154 0.00 0.00 40.96 3.77
2131 3921 6.990447 GTTGATAGCAAACGTGGAGAACCAA 61.990 44.000 0.00 0.00 40.96 3.67
2132 3922 2.037902 TGATAGCAAACGTGGAGAACCA 59.962 45.455 0.00 0.00 44.76 3.67
2133 3923 2.695359 TGATAGCAAACGTGGAGAACC 58.305 47.619 0.00 0.00 0.00 3.62
2134 3924 3.746492 AGTTGATAGCAAACGTGGAGAAC 59.254 43.478 0.00 0.00 35.42 3.01
2135 3925 3.745975 CAGTTGATAGCAAACGTGGAGAA 59.254 43.478 0.00 0.00 35.42 2.87
2136 3926 3.006430 TCAGTTGATAGCAAACGTGGAGA 59.994 43.478 0.00 0.00 35.42 3.71
2137 3927 3.325870 TCAGTTGATAGCAAACGTGGAG 58.674 45.455 0.00 0.00 35.42 3.86
2138 3928 3.394674 TCAGTTGATAGCAAACGTGGA 57.605 42.857 0.00 0.00 35.42 4.02
2139 3929 4.024048 ACTTTCAGTTGATAGCAAACGTGG 60.024 41.667 0.00 0.00 35.42 4.94
2140 3930 4.905866 CACTTTCAGTTGATAGCAAACGTG 59.094 41.667 0.00 0.00 35.42 4.49
2141 3931 4.574828 ACACTTTCAGTTGATAGCAAACGT 59.425 37.500 0.00 0.00 35.42 3.99
2142 3932 5.095691 ACACTTTCAGTTGATAGCAAACG 57.904 39.130 0.00 0.00 35.42 3.60
2143 3933 9.118236 GAATTACACTTTCAGTTGATAGCAAAC 57.882 33.333 0.00 0.00 35.42 2.93
2144 3934 9.066892 AGAATTACACTTTCAGTTGATAGCAAA 57.933 29.630 0.00 0.00 35.42 3.68
2145 3935 8.621532 AGAATTACACTTTCAGTTGATAGCAA 57.378 30.769 0.00 0.00 0.00 3.91
2146 3936 8.506437 CAAGAATTACACTTTCAGTTGATAGCA 58.494 33.333 0.34 0.00 0.00 3.49
2147 3937 8.507249 ACAAGAATTACACTTTCAGTTGATAGC 58.493 33.333 0.34 0.00 0.00 2.97
2149 3939 9.554395 TGACAAGAATTACACTTTCAGTTGATA 57.446 29.630 0.00 0.00 0.00 2.15
2150 3940 8.450578 TGACAAGAATTACACTTTCAGTTGAT 57.549 30.769 0.00 0.00 0.00 2.57
2151 3941 7.857734 TGACAAGAATTACACTTTCAGTTGA 57.142 32.000 0.00 0.00 0.00 3.18
2152 3942 8.344831 TGATGACAAGAATTACACTTTCAGTTG 58.655 33.333 0.00 0.00 0.00 3.16
2153 3943 8.450578 TGATGACAAGAATTACACTTTCAGTT 57.549 30.769 0.00 0.00 0.00 3.16
2154 3944 7.716998 ACTGATGACAAGAATTACACTTTCAGT 59.283 33.333 0.00 0.00 37.13 3.41
2155 3945 8.092521 ACTGATGACAAGAATTACACTTTCAG 57.907 34.615 0.00 0.00 35.96 3.02
2156 3946 8.450578 AACTGATGACAAGAATTACACTTTCA 57.549 30.769 0.00 0.00 0.00 2.69
2159 3949 9.725019 TGATAACTGATGACAAGAATTACACTT 57.275 29.630 0.00 0.00 0.00 3.16
2160 3950 9.376075 CTGATAACTGATGACAAGAATTACACT 57.624 33.333 0.00 0.00 0.00 3.55
2161 3951 9.371136 TCTGATAACTGATGACAAGAATTACAC 57.629 33.333 0.00 0.00 0.00 2.90
2162 3952 9.942850 TTCTGATAACTGATGACAAGAATTACA 57.057 29.630 0.00 0.00 0.00 2.41
2165 3955 8.954350 CCTTTCTGATAACTGATGACAAGAATT 58.046 33.333 0.00 0.00 0.00 2.17
2166 3956 8.105829 ACCTTTCTGATAACTGATGACAAGAAT 58.894 33.333 0.00 0.00 0.00 2.40
2167 3957 7.453393 ACCTTTCTGATAACTGATGACAAGAA 58.547 34.615 0.00 0.00 0.00 2.52
2168 3958 7.009179 ACCTTTCTGATAACTGATGACAAGA 57.991 36.000 0.00 0.00 0.00 3.02
2169 3959 6.314896 GGACCTTTCTGATAACTGATGACAAG 59.685 42.308 0.00 0.00 0.00 3.16
2170 3960 6.173339 GGACCTTTCTGATAACTGATGACAA 58.827 40.000 0.00 0.00 0.00 3.18
2171 3961 5.248248 TGGACCTTTCTGATAACTGATGACA 59.752 40.000 0.00 0.00 0.00 3.58
2172 3962 5.734720 TGGACCTTTCTGATAACTGATGAC 58.265 41.667 0.00 0.00 0.00 3.06
2173 3963 6.373005 TTGGACCTTTCTGATAACTGATGA 57.627 37.500 0.00 0.00 0.00 2.92
2174 3964 6.459298 GCATTGGACCTTTCTGATAACTGATG 60.459 42.308 0.00 0.00 0.00 3.07
2175 3965 5.591877 GCATTGGACCTTTCTGATAACTGAT 59.408 40.000 0.00 0.00 0.00 2.90
2176 3966 4.943705 GCATTGGACCTTTCTGATAACTGA 59.056 41.667 0.00 0.00 0.00 3.41
2177 3967 4.946157 AGCATTGGACCTTTCTGATAACTG 59.054 41.667 0.00 0.00 0.00 3.16
2178 3968 5.184892 AGCATTGGACCTTTCTGATAACT 57.815 39.130 0.00 0.00 0.00 2.24
2179 3969 6.116126 AGTAGCATTGGACCTTTCTGATAAC 58.884 40.000 0.00 0.00 0.00 1.89
2180 3970 6.156949 AGAGTAGCATTGGACCTTTCTGATAA 59.843 38.462 0.00 0.00 0.00 1.75
2181 3971 5.663106 AGAGTAGCATTGGACCTTTCTGATA 59.337 40.000 0.00 0.00 0.00 2.15
2182 3972 4.472833 AGAGTAGCATTGGACCTTTCTGAT 59.527 41.667 0.00 0.00 0.00 2.90
2183 3973 3.840666 AGAGTAGCATTGGACCTTTCTGA 59.159 43.478 0.00 0.00 0.00 3.27
2184 3974 4.081198 AGAGAGTAGCATTGGACCTTTCTG 60.081 45.833 0.00 0.00 0.00 3.02
2185 3975 4.100373 AGAGAGTAGCATTGGACCTTTCT 58.900 43.478 0.00 0.00 0.00 2.52
2186 3976 4.479786 AGAGAGTAGCATTGGACCTTTC 57.520 45.455 0.00 0.00 0.00 2.62
2187 3977 4.042187 ACAAGAGAGTAGCATTGGACCTTT 59.958 41.667 0.00 0.00 0.00 3.11
2188 3978 3.584848 ACAAGAGAGTAGCATTGGACCTT 59.415 43.478 0.00 0.00 0.00 3.50
2189 3979 3.177228 ACAAGAGAGTAGCATTGGACCT 58.823 45.455 0.00 0.00 0.00 3.85
2190 3980 3.618690 ACAAGAGAGTAGCATTGGACC 57.381 47.619 0.00 0.00 0.00 4.46
2191 3981 6.091441 CAGTTTACAAGAGAGTAGCATTGGAC 59.909 42.308 0.00 0.00 0.00 4.02
2192 3982 6.166279 CAGTTTACAAGAGAGTAGCATTGGA 58.834 40.000 0.00 0.00 0.00 3.53
2193 3983 5.163814 GCAGTTTACAAGAGAGTAGCATTGG 60.164 44.000 0.00 0.00 0.00 3.16
2194 3984 5.163814 GGCAGTTTACAAGAGAGTAGCATTG 60.164 44.000 0.00 0.00 0.00 2.82
2195 3985 4.938226 GGCAGTTTACAAGAGAGTAGCATT 59.062 41.667 0.00 0.00 0.00 3.56
2196 3986 4.020218 TGGCAGTTTACAAGAGAGTAGCAT 60.020 41.667 0.00 0.00 0.00 3.79
2197 3987 3.323691 TGGCAGTTTACAAGAGAGTAGCA 59.676 43.478 0.00 0.00 0.00 3.49
2198 3988 3.680458 GTGGCAGTTTACAAGAGAGTAGC 59.320 47.826 0.00 0.00 0.00 3.58
2199 3989 3.921021 CGTGGCAGTTTACAAGAGAGTAG 59.079 47.826 0.00 0.00 0.00 2.57
2200 3990 3.319972 ACGTGGCAGTTTACAAGAGAGTA 59.680 43.478 0.00 0.00 0.00 2.59
2201 3991 2.102588 ACGTGGCAGTTTACAAGAGAGT 59.897 45.455 0.00 0.00 0.00 3.24
2202 3992 2.476619 CACGTGGCAGTTTACAAGAGAG 59.523 50.000 7.95 0.00 0.00 3.20
2203 3993 2.159014 ACACGTGGCAGTTTACAAGAGA 60.159 45.455 21.57 0.00 0.00 3.10
2204 3994 2.210116 ACACGTGGCAGTTTACAAGAG 58.790 47.619 21.57 0.00 0.00 2.85
2205 3995 2.319136 ACACGTGGCAGTTTACAAGA 57.681 45.000 21.57 0.00 0.00 3.02
2206 3996 2.540769 CCAACACGTGGCAGTTTACAAG 60.541 50.000 21.57 0.00 41.72 3.16
2207 3997 1.402259 CCAACACGTGGCAGTTTACAA 59.598 47.619 21.57 0.00 41.72 2.41
2208 3998 1.018148 CCAACACGTGGCAGTTTACA 58.982 50.000 21.57 0.00 41.72 2.41
2209 3999 3.837669 CCAACACGTGGCAGTTTAC 57.162 52.632 21.57 0.00 41.72 2.01
2218 4008 3.993736 TGTATGATCTCAACCAACACGTG 59.006 43.478 15.48 15.48 0.00 4.49
2219 4009 4.265904 TGTATGATCTCAACCAACACGT 57.734 40.909 0.00 0.00 0.00 4.49
2220 4010 5.801350 ATTGTATGATCTCAACCAACACG 57.199 39.130 0.00 0.00 0.00 4.49
2268 4058 5.296780 ACGAGAGAAAGATCAAGTGCAAAAA 59.703 36.000 0.00 0.00 0.00 1.94
2269 4059 4.816385 ACGAGAGAAAGATCAAGTGCAAAA 59.184 37.500 0.00 0.00 0.00 2.44
2270 4060 4.380531 ACGAGAGAAAGATCAAGTGCAAA 58.619 39.130 0.00 0.00 0.00 3.68
2284 4074 4.804139 GTGTTTCAAGTTGAGACGAGAGAA 59.196 41.667 18.59 0.92 34.57 2.87
2311 4101 7.381408 GTGAACGACGAAATTATATCAGGATCA 59.619 37.037 0.00 0.00 0.00 2.92
2312 4102 7.148787 GGTGAACGACGAAATTATATCAGGATC 60.149 40.741 0.00 0.00 0.00 3.36
2408 4198 4.019792 ACATGCAGAACCAACTGATACA 57.980 40.909 0.00 0.00 39.94 2.29
2420 4215 5.069318 TCAGTTGATACCAAACATGCAGAA 58.931 37.500 0.00 0.00 33.49 3.02
2421 4216 4.650734 TCAGTTGATACCAAACATGCAGA 58.349 39.130 0.00 0.00 33.49 4.26
2574 4399 5.865552 ACATCAATGTCATTTGCAGTTTAGC 59.134 36.000 0.00 0.00 35.87 3.09
2575 4400 7.595875 TCAACATCAATGTCATTTGCAGTTTAG 59.404 33.333 0.00 0.00 40.80 1.85
2624 4449 0.169672 CTTGAAATCCTGCGCACCTG 59.830 55.000 5.66 0.00 0.00 4.00
2652 4477 0.615331 GCACTCTCCATCACCTTGGA 59.385 55.000 0.00 0.00 43.56 3.53
2653 4478 0.617413 AGCACTCTCCATCACCTTGG 59.383 55.000 0.00 0.00 38.18 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.