Multiple sequence alignment - TraesCS7B01G451100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G451100 chr7B 100.000 2264 0 0 1 2264 712837997 712835734 0.000000e+00 4181.0
1 TraesCS7B01G451100 chr7B 91.837 49 2 1 2174 2222 627284993 627284947 1.450000e-07 67.6
2 TraesCS7B01G451100 chr7D 84.580 1751 142 52 161 1822 618379252 618377541 0.000000e+00 1620.0
3 TraesCS7B01G451100 chr7D 88.219 365 40 1 987 1351 618714936 618715297 1.240000e-117 433.0
4 TraesCS7B01G451100 chr7A 86.541 847 87 11 530 1355 712093762 712092922 0.000000e+00 907.0
5 TraesCS7B01G451100 chr7A 82.452 473 49 19 1355 1822 712092894 712092451 1.270000e-102 383.0
6 TraesCS7B01G451100 chr7A 84.706 340 47 4 864 1201 712086671 712086335 3.600000e-88 335.0
7 TraesCS7B01G451100 chr7A 82.184 348 24 20 161 493 712094081 712093757 4.790000e-67 265.0
8 TraesCS7B01G451100 chr4B 88.710 62 7 0 2161 2222 119375156 119375095 2.410000e-10 76.8
9 TraesCS7B01G451100 chr1B 78.151 119 23 3 2147 2262 343994501 343994383 3.120000e-09 73.1
10 TraesCS7B01G451100 chr3D 87.719 57 6 1 2171 2226 273201337 273201281 5.220000e-07 65.8
11 TraesCS7B01G451100 chr3D 93.333 45 2 1 2171 2214 279523919 279523963 5.220000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G451100 chr7B 712835734 712837997 2263 True 4181.000000 4181 100.000000 1 2264 1 chr7B.!!$R2 2263
1 TraesCS7B01G451100 chr7D 618377541 618379252 1711 True 1620.000000 1620 84.580000 161 1822 1 chr7D.!!$R1 1661
2 TraesCS7B01G451100 chr7A 712092451 712094081 1630 True 518.333333 907 83.725667 161 1822 3 chr7A.!!$R2 1661

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.031585 TCGAAAGTGAGTCCACACGG 59.968 55.0 0.0 0.0 45.54 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2017 2138 0.031994 ACAAAGCATGCACCCGAAAC 59.968 50.0 21.98 0.0 0.0 2.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.667043 GGATACACGGCAGATAATCAATAAA 57.333 36.000 0.00 0.00 0.00 1.40
25 26 8.094798 GGATACACGGCAGATAATCAATAAAA 57.905 34.615 0.00 0.00 0.00 1.52
26 27 8.230486 GGATACACGGCAGATAATCAATAAAAG 58.770 37.037 0.00 0.00 0.00 2.27
27 28 8.677148 ATACACGGCAGATAATCAATAAAAGT 57.323 30.769 0.00 0.00 0.00 2.66
28 29 7.391148 ACACGGCAGATAATCAATAAAAGTT 57.609 32.000 0.00 0.00 0.00 2.66
29 30 7.826690 ACACGGCAGATAATCAATAAAAGTTT 58.173 30.769 0.00 0.00 0.00 2.66
30 31 8.303876 ACACGGCAGATAATCAATAAAAGTTTT 58.696 29.630 6.06 6.06 0.00 2.43
31 32 8.798153 CACGGCAGATAATCAATAAAAGTTTTC 58.202 33.333 3.60 0.00 0.00 2.29
32 33 8.519526 ACGGCAGATAATCAATAAAAGTTTTCA 58.480 29.630 3.60 0.00 0.00 2.69
33 34 9.520204 CGGCAGATAATCAATAAAAGTTTTCAT 57.480 29.630 3.60 0.00 0.00 2.57
106 107 0.805614 TTTTGTGTGTGTGTGGGTCG 59.194 50.000 0.00 0.00 0.00 4.79
107 108 0.036294 TTTGTGTGTGTGTGGGTCGA 60.036 50.000 0.00 0.00 0.00 4.20
108 109 0.036294 TTGTGTGTGTGTGGGTCGAA 60.036 50.000 0.00 0.00 0.00 3.71
109 110 0.036294 TGTGTGTGTGTGGGTCGAAA 60.036 50.000 0.00 0.00 0.00 3.46
110 111 0.655733 GTGTGTGTGTGGGTCGAAAG 59.344 55.000 0.00 0.00 0.00 2.62
111 112 0.250793 TGTGTGTGTGGGTCGAAAGT 59.749 50.000 0.00 0.00 0.00 2.66
112 113 0.655733 GTGTGTGTGGGTCGAAAGTG 59.344 55.000 0.00 0.00 0.00 3.16
113 114 0.537653 TGTGTGTGGGTCGAAAGTGA 59.462 50.000 0.00 0.00 0.00 3.41
114 115 1.217882 GTGTGTGGGTCGAAAGTGAG 58.782 55.000 0.00 0.00 0.00 3.51
115 116 0.828022 TGTGTGGGTCGAAAGTGAGT 59.172 50.000 0.00 0.00 0.00 3.41
116 117 1.202486 TGTGTGGGTCGAAAGTGAGTC 60.202 52.381 0.00 0.00 0.00 3.36
117 118 0.391597 TGTGGGTCGAAAGTGAGTCC 59.608 55.000 0.00 0.00 0.00 3.85
118 119 0.391597 GTGGGTCGAAAGTGAGTCCA 59.608 55.000 0.00 0.00 0.00 4.02
119 120 0.391597 TGGGTCGAAAGTGAGTCCAC 59.608 55.000 0.00 0.00 43.50 4.02
120 121 0.391597 GGGTCGAAAGTGAGTCCACA 59.608 55.000 0.00 0.00 45.54 4.17
121 122 1.499049 GGTCGAAAGTGAGTCCACAC 58.501 55.000 0.00 0.00 45.54 3.82
122 123 1.129326 GTCGAAAGTGAGTCCACACG 58.871 55.000 0.00 0.00 45.54 4.49
123 124 0.031585 TCGAAAGTGAGTCCACACGG 59.968 55.000 0.00 0.00 45.54 4.94
124 125 0.031585 CGAAAGTGAGTCCACACGGA 59.968 55.000 0.00 0.00 45.54 4.69
125 126 1.336887 CGAAAGTGAGTCCACACGGAT 60.337 52.381 0.00 0.00 45.33 4.18
126 127 2.069273 GAAAGTGAGTCCACACGGATG 58.931 52.381 0.00 0.00 45.33 3.51
127 128 0.321671 AAGTGAGTCCACACGGATGG 59.678 55.000 0.83 0.83 45.33 3.51
128 129 0.541998 AGTGAGTCCACACGGATGGA 60.542 55.000 5.84 5.84 46.92 3.41
134 135 1.275666 TCCACACGGATGGAGATTGT 58.724 50.000 5.84 0.00 44.14 2.71
135 136 2.462723 TCCACACGGATGGAGATTGTA 58.537 47.619 5.84 0.00 44.14 2.41
136 137 3.038280 TCCACACGGATGGAGATTGTAT 58.962 45.455 5.84 0.00 44.14 2.29
137 138 3.069586 TCCACACGGATGGAGATTGTATC 59.930 47.826 5.84 0.00 44.14 2.24
138 139 3.181466 CCACACGGATGGAGATTGTATCA 60.181 47.826 0.99 0.00 43.02 2.15
139 140 4.441792 CACACGGATGGAGATTGTATCAA 58.558 43.478 0.00 0.00 0.00 2.57
140 141 4.509230 CACACGGATGGAGATTGTATCAAG 59.491 45.833 0.00 0.00 0.00 3.02
141 142 3.496130 CACGGATGGAGATTGTATCAAGC 59.504 47.826 0.00 0.00 0.00 4.01
142 143 3.070018 CGGATGGAGATTGTATCAAGCC 58.930 50.000 0.00 0.00 0.00 4.35
143 144 3.416156 GGATGGAGATTGTATCAAGCCC 58.584 50.000 0.00 0.00 0.00 5.19
144 145 3.181440 GGATGGAGATTGTATCAAGCCCA 60.181 47.826 9.13 9.13 0.00 5.36
145 146 3.281727 TGGAGATTGTATCAAGCCCAC 57.718 47.619 4.70 0.00 0.00 4.61
146 147 2.846206 TGGAGATTGTATCAAGCCCACT 59.154 45.455 4.70 0.00 0.00 4.00
147 148 3.266772 TGGAGATTGTATCAAGCCCACTT 59.733 43.478 4.70 0.00 36.19 3.16
148 149 4.263905 TGGAGATTGTATCAAGCCCACTTT 60.264 41.667 4.70 0.00 32.29 2.66
149 150 4.096984 GGAGATTGTATCAAGCCCACTTTG 59.903 45.833 0.00 0.00 32.29 2.77
150 151 3.445096 AGATTGTATCAAGCCCACTTTGC 59.555 43.478 0.00 0.00 32.29 3.68
151 152 2.584835 TGTATCAAGCCCACTTTGCT 57.415 45.000 0.00 0.00 41.89 3.91
153 154 3.230134 TGTATCAAGCCCACTTTGCTTT 58.770 40.909 0.00 0.00 46.47 3.51
154 155 3.255642 TGTATCAAGCCCACTTTGCTTTC 59.744 43.478 0.00 0.00 46.47 2.62
155 156 1.039856 TCAAGCCCACTTTGCTTTCC 58.960 50.000 0.00 0.00 46.47 3.13
156 157 0.752054 CAAGCCCACTTTGCTTTCCA 59.248 50.000 0.00 0.00 46.47 3.53
157 158 1.043022 AAGCCCACTTTGCTTTCCAG 58.957 50.000 0.00 0.00 46.47 3.86
158 159 0.829182 AGCCCACTTTGCTTTCCAGG 60.829 55.000 0.00 0.00 34.87 4.45
159 160 1.667722 CCCACTTTGCTTTCCAGGC 59.332 57.895 0.00 0.00 0.00 4.85
201 203 1.551908 CCAGGCTGACTGCTTCTCCT 61.552 60.000 17.94 0.00 46.14 3.69
202 204 1.189752 CAGGCTGACTGCTTCTCCTA 58.810 55.000 9.42 0.00 40.97 2.94
207 217 2.451490 CTGACTGCTTCTCCTACCTCA 58.549 52.381 0.00 0.00 0.00 3.86
243 253 0.682852 ACAGCGGTGCTAACCTAACA 59.317 50.000 15.82 0.00 45.17 2.41
244 254 1.071071 ACAGCGGTGCTAACCTAACAA 59.929 47.619 15.82 0.00 45.17 2.83
246 256 0.441145 GCGGTGCTAACCTAACAACG 59.559 55.000 0.00 0.00 46.87 4.10
247 257 0.441145 CGGTGCTAACCTAACAACGC 59.559 55.000 0.00 0.00 45.17 4.84
248 258 1.515081 GGTGCTAACCTAACAACGCA 58.485 50.000 0.00 0.00 43.84 5.24
250 260 1.136446 GTGCTAACCTAACAACGCACG 60.136 52.381 0.00 0.00 38.41 5.34
251 261 1.269673 TGCTAACCTAACAACGCACGA 60.270 47.619 0.00 0.00 0.00 4.35
252 262 1.125566 GCTAACCTAACAACGCACGAC 59.874 52.381 0.00 0.00 0.00 4.34
253 263 2.396601 CTAACCTAACAACGCACGACA 58.603 47.619 0.00 0.00 0.00 4.35
305 315 1.096386 CCGTACACCCTCTCTCTCCG 61.096 65.000 0.00 0.00 0.00 4.63
340 366 1.067582 CCGCGGATAAGGTCTCACC 59.932 63.158 24.07 0.00 38.99 4.02
445 471 1.073125 TGTGTCCGTTGGATCCATGTT 59.927 47.619 17.06 0.00 32.73 2.71
446 472 2.303311 TGTGTCCGTTGGATCCATGTTA 59.697 45.455 17.06 0.00 32.73 2.41
463 489 6.434028 TCCATGTTAAAAATTGGTCTGGAGAG 59.566 38.462 0.00 0.00 0.00 3.20
466 492 2.222227 AAAATTGGTCTGGAGAGCCC 57.778 50.000 3.48 0.00 41.53 5.19
564 590 0.462047 AAGCGTTTCCGAGCTATGGG 60.462 55.000 4.72 0.00 43.78 4.00
589 622 1.317613 GATTTGGGTGCAGTGTGTCA 58.682 50.000 0.00 0.00 0.00 3.58
635 673 6.823182 CAGTATCAACACCTGGATTACAATCA 59.177 38.462 0.00 0.00 37.15 2.57
686 731 6.258727 GCCTGAATTCGTCTTAGATTGATTCA 59.741 38.462 0.04 12.78 0.00 2.57
712 758 2.202797 TGCGGCGATCTTCTGCTC 60.203 61.111 12.98 0.00 36.79 4.26
729 775 1.153369 TCATGCAGAGCCGGTTAGC 60.153 57.895 1.90 5.72 0.00 3.09
745 791 3.403038 GTTAGCTTCAGAACTGCCTCAA 58.597 45.455 0.00 0.00 0.00 3.02
773 819 7.722363 TGATATCAGTATTTCGCTCCAGTTAA 58.278 34.615 0.00 0.00 0.00 2.01
807 853 7.565398 AGTCTGAATCTATCTTAGGTTGCCTTA 59.435 37.037 0.00 0.00 34.61 2.69
828 901 1.613437 CCAACAGGGCTGGTTAGTTTG 59.387 52.381 0.00 0.00 34.19 2.93
884 957 0.944386 TTTGCACCGCTGAAGAGTTC 59.056 50.000 0.00 0.00 0.00 3.01
912 989 4.985295 CAATTCATATTGTTGAATGCGCG 58.015 39.130 0.00 0.00 43.73 6.86
927 1005 3.290308 TGCGCGGTACAAATGAATTTT 57.710 38.095 8.83 0.00 0.00 1.82
959 1037 0.371645 CGGCTTCGTCATTTCTGCTC 59.628 55.000 0.00 0.00 0.00 4.26
985 1063 1.597742 TTCTTGTCAGGTTCAGCTGC 58.402 50.000 9.47 0.00 0.00 5.25
1051 1129 1.774217 AAGGCCACCCTGGTTCTCA 60.774 57.895 5.01 0.00 41.90 3.27
1142 1221 0.549950 AGCATGGTGATCCTCAAGGG 59.450 55.000 0.00 0.00 35.41 3.95
1149 1228 2.972713 GGTGATCCTCAAGGGCTACATA 59.027 50.000 0.00 0.00 35.41 2.29
1250 1329 9.388506 TGCTAAAAATCCTCTGAAGAAATCTAG 57.611 33.333 0.00 0.00 0.00 2.43
1259 1338 6.219417 TCTGAAGAAATCTAGGAAGCAGAG 57.781 41.667 0.00 0.00 0.00 3.35
1281 1372 4.282195 AGGTGATCGTCCTAAATCTCATCC 59.718 45.833 7.38 0.00 33.04 3.51
1282 1373 4.230657 GTGATCGTCCTAAATCTCATCCG 58.769 47.826 0.00 0.00 0.00 4.18
1285 1376 4.505313 TCGTCCTAAATCTCATCCGATG 57.495 45.455 1.55 1.55 0.00 3.84
1299 1390 3.985805 CGATGTATCGCGCTCTTTG 57.014 52.632 5.56 0.00 43.84 2.77
1311 1402 1.275291 CGCTCTTTGTTAGTCCCCTCA 59.725 52.381 0.00 0.00 0.00 3.86
1313 1404 3.619979 CGCTCTTTGTTAGTCCCCTCATT 60.620 47.826 0.00 0.00 0.00 2.57
1317 1408 5.560724 TCTTTGTTAGTCCCCTCATTCAAG 58.439 41.667 0.00 0.00 0.00 3.02
1318 1409 4.993705 TTGTTAGTCCCCTCATTCAAGT 57.006 40.909 0.00 0.00 0.00 3.16
1348 1439 1.741706 CATGCTGTTGTCCCTTGCTAG 59.258 52.381 0.00 0.00 0.00 3.42
1349 1440 0.606401 TGCTGTTGTCCCTTGCTAGC 60.606 55.000 8.10 8.10 0.00 3.42
1350 1441 0.322008 GCTGTTGTCCCTTGCTAGCT 60.322 55.000 17.23 0.00 0.00 3.32
1351 1442 1.066143 GCTGTTGTCCCTTGCTAGCTA 60.066 52.381 17.23 7.59 0.00 3.32
1352 1443 2.615493 GCTGTTGTCCCTTGCTAGCTAA 60.615 50.000 17.23 7.78 0.00 3.09
1487 1605 8.737168 ATATATGAGCTTCAGCACAAAAGTTA 57.263 30.769 2.92 0.00 44.22 2.24
1571 1689 3.869912 GCAGGTCCTGATAGCAGTCAAAA 60.870 47.826 23.77 0.00 40.63 2.44
1628 1746 7.121974 GTGTATTATCTGTACACATGCATCC 57.878 40.000 0.00 0.00 46.94 3.51
1639 1757 1.000739 ATGCATCCAACTGTGGGGG 59.999 57.895 0.33 0.00 46.01 5.40
1640 1758 1.803453 ATGCATCCAACTGTGGGGGT 61.803 55.000 0.33 0.00 46.01 4.95
1648 1768 3.117093 TCCAACTGTGGGGGTAAAAATGA 60.117 43.478 0.33 0.00 46.01 2.57
1652 1772 5.010708 ACTGTGGGGGTAAAAATGATTCT 57.989 39.130 0.00 0.00 0.00 2.40
1734 1855 6.435164 ACTATGTTTCCAAGCCCTATCAAAT 58.565 36.000 0.00 0.00 0.00 2.32
1737 1858 5.792741 TGTTTCCAAGCCCTATCAAATTTG 58.207 37.500 12.15 12.15 0.00 2.32
1743 1864 5.279910 CCAAGCCCTATCAAATTTGTGGAAA 60.280 40.000 17.47 0.00 0.00 3.13
1747 1868 6.043127 AGCCCTATCAAATTTGTGGAAACTTT 59.957 34.615 17.47 0.00 0.00 2.66
1749 1870 7.875554 GCCCTATCAAATTTGTGGAAACTTTTA 59.124 33.333 17.47 0.00 0.00 1.52
1750 1871 9.942850 CCCTATCAAATTTGTGGAAACTTTTAT 57.057 29.630 17.47 2.49 0.00 1.40
1758 1879 6.783708 TTGTGGAAACTTTTATCTTGTGGT 57.216 33.333 0.00 0.00 0.00 4.16
1800 1921 4.006989 AGCATAGTACCGATCTCTAGCTG 58.993 47.826 0.00 0.00 0.00 4.24
1826 1947 2.835027 GTTGAAAACCCTGACGTCTCT 58.165 47.619 17.92 0.00 42.21 3.10
1827 1948 3.986277 GTTGAAAACCCTGACGTCTCTA 58.014 45.455 17.92 0.00 42.21 2.43
1828 1949 3.936372 TGAAAACCCTGACGTCTCTAG 57.064 47.619 17.92 5.73 0.00 2.43
1829 1950 2.029290 TGAAAACCCTGACGTCTCTAGC 60.029 50.000 17.92 0.00 0.00 3.42
1830 1951 1.926108 AAACCCTGACGTCTCTAGCT 58.074 50.000 17.92 0.00 0.00 3.32
1831 1952 1.178276 AACCCTGACGTCTCTAGCTG 58.822 55.000 17.92 2.80 0.00 4.24
1832 1953 0.328592 ACCCTGACGTCTCTAGCTGA 59.671 55.000 17.92 0.00 0.00 4.26
1833 1954 1.271982 ACCCTGACGTCTCTAGCTGAA 60.272 52.381 17.92 0.00 0.00 3.02
1834 1955 1.133407 CCCTGACGTCTCTAGCTGAAC 59.867 57.143 17.92 0.00 0.00 3.18
1835 1956 1.813178 CCTGACGTCTCTAGCTGAACA 59.187 52.381 17.92 0.00 0.00 3.18
1836 1957 2.425312 CCTGACGTCTCTAGCTGAACAT 59.575 50.000 17.92 0.00 0.00 2.71
1837 1958 3.433709 CTGACGTCTCTAGCTGAACATG 58.566 50.000 17.92 0.00 0.00 3.21
1838 1959 2.820197 TGACGTCTCTAGCTGAACATGT 59.180 45.455 17.92 0.00 0.00 3.21
1839 1960 3.255888 TGACGTCTCTAGCTGAACATGTT 59.744 43.478 17.92 11.78 0.00 2.71
1840 1961 3.579709 ACGTCTCTAGCTGAACATGTTG 58.420 45.455 17.58 3.43 0.00 3.33
1841 1962 3.255888 ACGTCTCTAGCTGAACATGTTGA 59.744 43.478 17.58 6.71 0.00 3.18
1842 1963 4.237724 CGTCTCTAGCTGAACATGTTGAA 58.762 43.478 17.58 2.95 0.00 2.69
1843 1964 4.686091 CGTCTCTAGCTGAACATGTTGAAA 59.314 41.667 17.58 0.23 0.00 2.69
1844 1965 5.177511 CGTCTCTAGCTGAACATGTTGAAAA 59.822 40.000 17.58 0.00 0.00 2.29
1856 1977 1.632589 GTTGAAAACCCTGATGGCCT 58.367 50.000 3.32 0.00 42.21 5.19
1857 1978 2.802719 GTTGAAAACCCTGATGGCCTA 58.197 47.619 3.32 0.00 42.21 3.93
1858 1979 3.365472 GTTGAAAACCCTGATGGCCTAT 58.635 45.455 3.32 0.00 42.21 2.57
1859 1980 3.756082 TGAAAACCCTGATGGCCTATT 57.244 42.857 3.32 0.00 37.83 1.73
1860 1981 3.364549 TGAAAACCCTGATGGCCTATTG 58.635 45.455 3.32 0.00 37.83 1.90
1861 1982 3.245586 TGAAAACCCTGATGGCCTATTGT 60.246 43.478 3.32 0.00 37.83 2.71
1862 1983 2.442236 AACCCTGATGGCCTATTGTG 57.558 50.000 3.32 0.00 37.83 3.33
1863 1984 0.106519 ACCCTGATGGCCTATTGTGC 60.107 55.000 3.32 0.00 37.83 4.57
1871 1992 2.886382 GCCTATTGTGCCATGTGGT 58.114 52.632 0.35 0.00 37.57 4.16
1872 1993 2.051334 GCCTATTGTGCCATGTGGTA 57.949 50.000 0.35 0.00 37.57 3.25
1873 1994 2.586425 GCCTATTGTGCCATGTGGTAT 58.414 47.619 0.35 0.00 37.57 2.73
1874 1995 2.554032 GCCTATTGTGCCATGTGGTATC 59.446 50.000 0.35 0.00 37.57 2.24
1875 1996 3.748668 GCCTATTGTGCCATGTGGTATCT 60.749 47.826 0.35 0.00 37.57 1.98
1876 1997 4.067896 CCTATTGTGCCATGTGGTATCTC 58.932 47.826 0.35 0.00 37.57 2.75
1877 1998 3.939740 ATTGTGCCATGTGGTATCTCT 57.060 42.857 0.35 0.00 37.57 3.10
1878 1999 5.012046 CCTATTGTGCCATGTGGTATCTCTA 59.988 44.000 0.35 0.00 37.57 2.43
1879 2000 4.406648 TTGTGCCATGTGGTATCTCTAG 57.593 45.455 0.35 0.00 37.57 2.43
1880 2001 2.103094 TGTGCCATGTGGTATCTCTAGC 59.897 50.000 0.35 0.00 37.57 3.42
1881 2002 2.366916 GTGCCATGTGGTATCTCTAGCT 59.633 50.000 0.35 0.00 37.57 3.32
1882 2003 3.041211 TGCCATGTGGTATCTCTAGCTT 58.959 45.455 0.00 0.00 37.57 3.74
1883 2004 4.039245 GTGCCATGTGGTATCTCTAGCTTA 59.961 45.833 0.00 0.00 37.57 3.09
1884 2005 4.653801 TGCCATGTGGTATCTCTAGCTTAA 59.346 41.667 0.00 0.00 37.57 1.85
1885 2006 4.991687 GCCATGTGGTATCTCTAGCTTAAC 59.008 45.833 0.00 0.00 37.57 2.01
1886 2007 5.453339 GCCATGTGGTATCTCTAGCTTAACA 60.453 44.000 0.00 0.00 37.57 2.41
1887 2008 6.742644 GCCATGTGGTATCTCTAGCTTAACAT 60.743 42.308 0.00 0.00 37.57 2.71
1888 2009 6.870965 CCATGTGGTATCTCTAGCTTAACATC 59.129 42.308 0.00 0.00 0.00 3.06
1889 2010 6.073327 TGTGGTATCTCTAGCTTAACATCG 57.927 41.667 0.00 0.00 0.00 3.84
1890 2011 5.009710 TGTGGTATCTCTAGCTTAACATCGG 59.990 44.000 0.00 0.00 0.00 4.18
1891 2012 5.009811 GTGGTATCTCTAGCTTAACATCGGT 59.990 44.000 0.00 0.00 0.00 4.69
1892 2013 6.206243 GTGGTATCTCTAGCTTAACATCGGTA 59.794 42.308 0.00 0.00 0.00 4.02
1893 2014 6.774170 TGGTATCTCTAGCTTAACATCGGTAA 59.226 38.462 0.00 0.00 0.00 2.85
1894 2015 7.083230 GGTATCTCTAGCTTAACATCGGTAAC 58.917 42.308 0.00 0.00 0.00 2.50
1895 2016 6.710597 ATCTCTAGCTTAACATCGGTAACA 57.289 37.500 0.00 0.00 0.00 2.41
1896 2017 6.519679 TCTCTAGCTTAACATCGGTAACAA 57.480 37.500 0.00 0.00 0.00 2.83
1897 2018 6.927416 TCTCTAGCTTAACATCGGTAACAAA 58.073 36.000 0.00 0.00 0.00 2.83
1898 2019 6.810182 TCTCTAGCTTAACATCGGTAACAAAC 59.190 38.462 0.00 0.00 0.00 2.93
1899 2020 6.457355 TCTAGCTTAACATCGGTAACAAACA 58.543 36.000 0.00 0.00 0.00 2.83
1900 2021 5.352643 AGCTTAACATCGGTAACAAACAC 57.647 39.130 0.00 0.00 0.00 3.32
1901 2022 5.061179 AGCTTAACATCGGTAACAAACACT 58.939 37.500 0.00 0.00 0.00 3.55
1902 2023 6.225318 AGCTTAACATCGGTAACAAACACTA 58.775 36.000 0.00 0.00 0.00 2.74
1903 2024 6.877322 AGCTTAACATCGGTAACAAACACTAT 59.123 34.615 0.00 0.00 0.00 2.12
1904 2025 7.389607 AGCTTAACATCGGTAACAAACACTATT 59.610 33.333 0.00 0.00 0.00 1.73
1905 2026 7.691050 GCTTAACATCGGTAACAAACACTATTC 59.309 37.037 0.00 0.00 0.00 1.75
1906 2027 8.836268 TTAACATCGGTAACAAACACTATTCT 57.164 30.769 0.00 0.00 0.00 2.40
1907 2028 6.721571 ACATCGGTAACAAACACTATTCTG 57.278 37.500 0.00 0.00 0.00 3.02
1908 2029 6.228258 ACATCGGTAACAAACACTATTCTGT 58.772 36.000 0.00 0.00 0.00 3.41
1909 2030 6.367969 ACATCGGTAACAAACACTATTCTGTC 59.632 38.462 0.00 0.00 0.00 3.51
1910 2031 6.092955 TCGGTAACAAACACTATTCTGTCT 57.907 37.500 0.00 0.00 0.00 3.41
1911 2032 5.924254 TCGGTAACAAACACTATTCTGTCTG 59.076 40.000 0.00 0.00 0.00 3.51
1912 2033 5.924254 CGGTAACAAACACTATTCTGTCTGA 59.076 40.000 0.00 0.00 0.00 3.27
1913 2034 6.422701 CGGTAACAAACACTATTCTGTCTGAA 59.577 38.462 0.00 0.00 39.24 3.02
1914 2035 7.568861 CGGTAACAAACACTATTCTGTCTGAAC 60.569 40.741 0.00 0.00 37.52 3.18
1915 2036 7.225931 GGTAACAAACACTATTCTGTCTGAACA 59.774 37.037 0.00 0.00 37.52 3.18
1930 2051 6.223852 TGTCTGAACAGAATACAGAAACTCC 58.776 40.000 6.08 0.00 41.31 3.85
1931 2052 5.346281 GTCTGAACAGAATACAGAAACTCCG 59.654 44.000 6.08 0.00 41.31 4.63
1932 2053 5.243060 TCTGAACAGAATACAGAAACTCCGA 59.757 40.000 1.79 0.00 37.66 4.55
1933 2054 5.227908 TGAACAGAATACAGAAACTCCGAC 58.772 41.667 0.00 0.00 0.00 4.79
1934 2055 4.866508 ACAGAATACAGAAACTCCGACA 57.133 40.909 0.00 0.00 0.00 4.35
1935 2056 5.209818 ACAGAATACAGAAACTCCGACAA 57.790 39.130 0.00 0.00 0.00 3.18
1936 2057 4.989168 ACAGAATACAGAAACTCCGACAAC 59.011 41.667 0.00 0.00 0.00 3.32
1937 2058 4.988540 CAGAATACAGAAACTCCGACAACA 59.011 41.667 0.00 0.00 0.00 3.33
1938 2059 5.639506 CAGAATACAGAAACTCCGACAACAT 59.360 40.000 0.00 0.00 0.00 2.71
1939 2060 5.639506 AGAATACAGAAACTCCGACAACATG 59.360 40.000 0.00 0.00 0.00 3.21
1940 2061 3.469008 ACAGAAACTCCGACAACATGA 57.531 42.857 0.00 0.00 0.00 3.07
1941 2062 3.804036 ACAGAAACTCCGACAACATGAA 58.196 40.909 0.00 0.00 0.00 2.57
1942 2063 3.560068 ACAGAAACTCCGACAACATGAAC 59.440 43.478 0.00 0.00 0.00 3.18
1943 2064 3.809832 CAGAAACTCCGACAACATGAACT 59.190 43.478 0.00 0.00 0.00 3.01
1944 2065 4.058817 AGAAACTCCGACAACATGAACTC 58.941 43.478 0.00 0.00 0.00 3.01
1945 2066 3.469008 AACTCCGACAACATGAACTCA 57.531 42.857 0.00 0.00 0.00 3.41
1946 2067 3.469008 ACTCCGACAACATGAACTCAA 57.531 42.857 0.00 0.00 0.00 3.02
1947 2068 4.008074 ACTCCGACAACATGAACTCAAT 57.992 40.909 0.00 0.00 0.00 2.57
1948 2069 4.389374 ACTCCGACAACATGAACTCAATT 58.611 39.130 0.00 0.00 0.00 2.32
1949 2070 4.821805 ACTCCGACAACATGAACTCAATTT 59.178 37.500 0.00 0.00 0.00 1.82
1950 2071 5.107109 TCCGACAACATGAACTCAATTTG 57.893 39.130 0.00 0.00 0.00 2.32
1951 2072 4.023279 TCCGACAACATGAACTCAATTTGG 60.023 41.667 0.00 0.00 0.00 3.28
1952 2073 4.229096 CGACAACATGAACTCAATTTGGG 58.771 43.478 0.00 0.00 0.00 4.12
1953 2074 4.023279 CGACAACATGAACTCAATTTGGGA 60.023 41.667 2.58 0.00 0.00 4.37
1954 2075 5.335897 CGACAACATGAACTCAATTTGGGAT 60.336 40.000 2.58 0.00 0.00 3.85
1955 2076 6.423776 ACAACATGAACTCAATTTGGGATT 57.576 33.333 2.58 0.00 0.00 3.01
1956 2077 6.225318 ACAACATGAACTCAATTTGGGATTG 58.775 36.000 2.58 1.06 0.00 2.67
1957 2078 5.410355 ACATGAACTCAATTTGGGATTGG 57.590 39.130 2.58 0.00 0.00 3.16
1958 2079 5.085920 ACATGAACTCAATTTGGGATTGGA 58.914 37.500 2.58 0.00 0.00 3.53
1959 2080 5.543405 ACATGAACTCAATTTGGGATTGGAA 59.457 36.000 2.58 0.00 0.00 3.53
1960 2081 5.726980 TGAACTCAATTTGGGATTGGAAG 57.273 39.130 2.58 0.00 0.00 3.46
1961 2082 4.021192 TGAACTCAATTTGGGATTGGAAGC 60.021 41.667 2.58 0.00 0.00 3.86
1962 2083 3.509442 ACTCAATTTGGGATTGGAAGCA 58.491 40.909 2.58 0.00 0.00 3.91
1963 2084 3.903090 ACTCAATTTGGGATTGGAAGCAA 59.097 39.130 2.58 0.00 0.00 3.91
1964 2085 4.248058 CTCAATTTGGGATTGGAAGCAAC 58.752 43.478 0.00 0.00 0.00 4.17
1965 2086 3.645212 TCAATTTGGGATTGGAAGCAACA 59.355 39.130 0.00 0.00 0.00 3.33
1966 2087 3.683365 ATTTGGGATTGGAAGCAACAC 57.317 42.857 0.00 0.00 0.00 3.32
1967 2088 2.079170 TTGGGATTGGAAGCAACACA 57.921 45.000 0.00 0.00 0.00 3.72
1968 2089 1.327303 TGGGATTGGAAGCAACACAC 58.673 50.000 0.00 0.00 0.00 3.82
1969 2090 1.133513 TGGGATTGGAAGCAACACACT 60.134 47.619 0.00 0.00 0.00 3.55
1970 2091 2.107378 TGGGATTGGAAGCAACACACTA 59.893 45.455 0.00 0.00 0.00 2.74
1971 2092 2.749621 GGGATTGGAAGCAACACACTAG 59.250 50.000 0.00 0.00 0.00 2.57
1972 2093 2.162408 GGATTGGAAGCAACACACTAGC 59.838 50.000 0.00 0.00 0.00 3.42
1973 2094 2.340210 TTGGAAGCAACACACTAGCA 57.660 45.000 0.00 0.00 0.00 3.49
1974 2095 1.593196 TGGAAGCAACACACTAGCAC 58.407 50.000 0.00 0.00 0.00 4.40
1975 2096 1.134250 TGGAAGCAACACACTAGCACA 60.134 47.619 0.00 0.00 0.00 4.57
1976 2097 2.154462 GGAAGCAACACACTAGCACAT 58.846 47.619 0.00 0.00 0.00 3.21
1977 2098 2.095567 GGAAGCAACACACTAGCACATG 60.096 50.000 0.00 0.00 0.00 3.21
1978 2099 2.260844 AGCAACACACTAGCACATGT 57.739 45.000 0.00 0.00 0.00 3.21
1979 2100 2.146342 AGCAACACACTAGCACATGTC 58.854 47.619 0.00 0.00 0.00 3.06
1980 2101 1.872952 GCAACACACTAGCACATGTCA 59.127 47.619 0.00 0.00 0.00 3.58
1981 2102 2.349817 GCAACACACTAGCACATGTCAC 60.350 50.000 0.00 0.00 0.00 3.67
1982 2103 3.133691 CAACACACTAGCACATGTCACT 58.866 45.455 0.00 0.00 0.00 3.41
1983 2104 3.032017 ACACACTAGCACATGTCACTC 57.968 47.619 0.00 0.00 0.00 3.51
1984 2105 1.988467 CACACTAGCACATGTCACTCG 59.012 52.381 0.00 0.00 0.00 4.18
1985 2106 1.886542 ACACTAGCACATGTCACTCGA 59.113 47.619 0.00 0.00 0.00 4.04
1986 2107 2.493675 ACACTAGCACATGTCACTCGAT 59.506 45.455 0.00 0.00 0.00 3.59
1987 2108 3.694566 ACACTAGCACATGTCACTCGATA 59.305 43.478 0.00 0.00 0.00 2.92
1988 2109 4.038361 CACTAGCACATGTCACTCGATAC 58.962 47.826 0.00 0.00 0.00 2.24
1989 2110 3.694566 ACTAGCACATGTCACTCGATACA 59.305 43.478 0.00 0.00 0.00 2.29
1990 2111 2.881074 AGCACATGTCACTCGATACAC 58.119 47.619 0.00 0.00 0.00 2.90
1991 2112 1.583856 GCACATGTCACTCGATACACG 59.416 52.381 0.00 0.00 44.09 4.49
1992 2113 2.863739 CACATGTCACTCGATACACGT 58.136 47.619 0.00 0.00 43.13 4.49
1993 2114 2.594214 CACATGTCACTCGATACACGTG 59.406 50.000 15.48 15.48 43.13 4.49
1995 2116 3.242518 CATGTCACTCGATACACGTGTT 58.757 45.455 28.55 14.60 44.41 3.32
1996 2117 3.358707 TGTCACTCGATACACGTGTTT 57.641 42.857 28.55 19.88 44.41 2.83
1997 2118 3.302555 TGTCACTCGATACACGTGTTTC 58.697 45.455 28.55 25.90 44.41 2.78
1998 2119 2.660236 GTCACTCGATACACGTGTTTCC 59.340 50.000 28.55 14.71 44.41 3.13
1999 2120 2.555325 TCACTCGATACACGTGTTTCCT 59.445 45.455 28.55 9.47 44.41 3.36
2000 2121 2.915463 CACTCGATACACGTGTTTCCTC 59.085 50.000 28.55 16.58 44.41 3.71
2001 2122 2.818432 ACTCGATACACGTGTTTCCTCT 59.182 45.455 28.55 8.68 44.41 3.69
2002 2123 3.119919 ACTCGATACACGTGTTTCCTCTC 60.120 47.826 28.55 12.60 44.41 3.20
2003 2124 2.815503 TCGATACACGTGTTTCCTCTCA 59.184 45.455 28.55 6.21 43.13 3.27
2004 2125 3.253921 TCGATACACGTGTTTCCTCTCAA 59.746 43.478 28.55 5.36 43.13 3.02
2005 2126 3.364023 CGATACACGTGTTTCCTCTCAAC 59.636 47.826 28.55 3.71 37.22 3.18
2006 2127 1.949465 ACACGTGTTTCCTCTCAACC 58.051 50.000 17.22 0.00 0.00 3.77
2007 2128 1.226746 CACGTGTTTCCTCTCAACCC 58.773 55.000 7.58 0.00 0.00 4.11
2008 2129 1.129058 ACGTGTTTCCTCTCAACCCT 58.871 50.000 0.00 0.00 0.00 4.34
2009 2130 1.202651 ACGTGTTTCCTCTCAACCCTG 60.203 52.381 0.00 0.00 0.00 4.45
2010 2131 1.239347 GTGTTTCCTCTCAACCCTGC 58.761 55.000 0.00 0.00 0.00 4.85
2011 2132 1.140312 TGTTTCCTCTCAACCCTGCT 58.860 50.000 0.00 0.00 0.00 4.24
2012 2133 1.202806 TGTTTCCTCTCAACCCTGCTG 60.203 52.381 0.00 0.00 0.00 4.41
2013 2134 0.401738 TTTCCTCTCAACCCTGCTGG 59.598 55.000 1.89 1.89 41.37 4.85
2014 2135 2.045536 CCTCTCAACCCTGCTGGC 60.046 66.667 3.63 0.00 37.83 4.85
2015 2136 2.045536 CTCTCAACCCTGCTGGCC 60.046 66.667 3.63 0.00 37.83 5.36
2016 2137 3.965539 CTCTCAACCCTGCTGGCCG 62.966 68.421 3.63 0.00 37.83 6.13
2019 2140 4.974721 CAACCCTGCTGGCCGGTT 62.975 66.667 14.55 9.94 40.55 4.44
2020 2141 4.218686 AACCCTGCTGGCCGGTTT 62.219 61.111 14.55 0.00 36.46 3.27
2021 2142 4.660938 ACCCTGCTGGCCGGTTTC 62.661 66.667 14.55 0.00 37.83 2.78
2032 2153 3.055719 CGGTTTCGGGTGCATGCT 61.056 61.111 20.33 0.00 0.00 3.79
2033 2154 2.625823 CGGTTTCGGGTGCATGCTT 61.626 57.895 20.33 0.00 0.00 3.91
2034 2155 1.665442 GGTTTCGGGTGCATGCTTT 59.335 52.632 20.33 0.00 0.00 3.51
2035 2156 0.667184 GGTTTCGGGTGCATGCTTTG 60.667 55.000 20.33 6.36 0.00 2.77
2036 2157 0.031994 GTTTCGGGTGCATGCTTTGT 59.968 50.000 20.33 0.00 0.00 2.83
2037 2158 1.268352 GTTTCGGGTGCATGCTTTGTA 59.732 47.619 20.33 0.00 0.00 2.41
2038 2159 1.832883 TTCGGGTGCATGCTTTGTAT 58.167 45.000 20.33 0.00 0.00 2.29
2039 2160 1.832883 TCGGGTGCATGCTTTGTATT 58.167 45.000 20.33 0.00 0.00 1.89
2040 2161 1.742831 TCGGGTGCATGCTTTGTATTC 59.257 47.619 20.33 0.00 0.00 1.75
2041 2162 1.745087 CGGGTGCATGCTTTGTATTCT 59.255 47.619 20.33 0.00 0.00 2.40
2042 2163 2.223340 CGGGTGCATGCTTTGTATTCTC 60.223 50.000 20.33 0.00 0.00 2.87
2043 2164 2.099756 GGGTGCATGCTTTGTATTCTCC 59.900 50.000 20.33 5.58 0.00 3.71
2044 2165 2.099756 GGTGCATGCTTTGTATTCTCCC 59.900 50.000 20.33 0.00 0.00 4.30
2045 2166 3.019564 GTGCATGCTTTGTATTCTCCCT 58.980 45.455 20.33 0.00 0.00 4.20
2046 2167 3.018856 TGCATGCTTTGTATTCTCCCTG 58.981 45.455 20.33 0.00 0.00 4.45
2047 2168 3.019564 GCATGCTTTGTATTCTCCCTGT 58.980 45.455 11.37 0.00 0.00 4.00
2048 2169 3.445096 GCATGCTTTGTATTCTCCCTGTT 59.555 43.478 11.37 0.00 0.00 3.16
2049 2170 4.082026 GCATGCTTTGTATTCTCCCTGTTT 60.082 41.667 11.37 0.00 0.00 2.83
2050 2171 5.404946 CATGCTTTGTATTCTCCCTGTTTG 58.595 41.667 0.00 0.00 0.00 2.93
2051 2172 4.469657 TGCTTTGTATTCTCCCTGTTTGT 58.530 39.130 0.00 0.00 0.00 2.83
2052 2173 4.278170 TGCTTTGTATTCTCCCTGTTTGTG 59.722 41.667 0.00 0.00 0.00 3.33
2053 2174 4.518970 GCTTTGTATTCTCCCTGTTTGTGA 59.481 41.667 0.00 0.00 0.00 3.58
2054 2175 5.183904 GCTTTGTATTCTCCCTGTTTGTGAT 59.816 40.000 0.00 0.00 0.00 3.06
2055 2176 6.294731 GCTTTGTATTCTCCCTGTTTGTGATT 60.295 38.462 0.00 0.00 0.00 2.57
2056 2177 7.094377 GCTTTGTATTCTCCCTGTTTGTGATTA 60.094 37.037 0.00 0.00 0.00 1.75
2057 2178 8.698973 TTTGTATTCTCCCTGTTTGTGATTAA 57.301 30.769 0.00 0.00 0.00 1.40
2058 2179 8.877864 TTGTATTCTCCCTGTTTGTGATTAAT 57.122 30.769 0.00 0.00 0.00 1.40
2059 2180 8.279970 TGTATTCTCCCTGTTTGTGATTAATG 57.720 34.615 0.00 0.00 0.00 1.90
2060 2181 8.106462 TGTATTCTCCCTGTTTGTGATTAATGA 58.894 33.333 0.00 0.00 0.00 2.57
2061 2182 9.125026 GTATTCTCCCTGTTTGTGATTAATGAT 57.875 33.333 0.00 0.00 0.00 2.45
2063 2184 8.506168 TTCTCCCTGTTTGTGATTAATGATAC 57.494 34.615 0.00 0.00 0.00 2.24
2064 2185 7.629157 TCTCCCTGTTTGTGATTAATGATACA 58.371 34.615 0.00 0.00 0.00 2.29
2065 2186 7.552687 TCTCCCTGTTTGTGATTAATGATACAC 59.447 37.037 0.00 0.00 0.00 2.90
2066 2187 6.315144 TCCCTGTTTGTGATTAATGATACACG 59.685 38.462 0.00 0.00 36.25 4.49
2067 2188 6.093495 CCCTGTTTGTGATTAATGATACACGT 59.907 38.462 0.00 0.00 36.25 4.49
2068 2189 7.361713 CCCTGTTTGTGATTAATGATACACGTT 60.362 37.037 0.00 0.00 36.25 3.99
2069 2190 8.661257 CCTGTTTGTGATTAATGATACACGTTA 58.339 33.333 0.00 0.00 36.25 3.18
2070 2191 9.472995 CTGTTTGTGATTAATGATACACGTTAC 57.527 33.333 0.00 0.00 36.25 2.50
2071 2192 9.210329 TGTTTGTGATTAATGATACACGTTACT 57.790 29.630 0.00 0.00 36.25 2.24
2093 2214 2.112297 AAAAAGGGCCACTCGCGA 59.888 55.556 9.26 9.26 38.94 5.87
2094 2215 1.303317 AAAAAGGGCCACTCGCGAT 60.303 52.632 10.36 0.00 38.94 4.58
2095 2216 0.035820 AAAAAGGGCCACTCGCGATA 60.036 50.000 10.36 0.00 38.94 2.92
2096 2217 0.462047 AAAAGGGCCACTCGCGATAG 60.462 55.000 10.36 4.92 38.94 2.08
2097 2218 1.614241 AAAGGGCCACTCGCGATAGT 61.614 55.000 10.36 1.08 38.94 2.12
2122 2243 9.490663 GTGAAACTGTAATTGATGTATAAGCAC 57.509 33.333 0.00 0.00 0.00 4.40
2123 2244 9.225436 TGAAACTGTAATTGATGTATAAGCACA 57.775 29.630 0.00 0.00 0.00 4.57
2126 2247 9.840427 AACTGTAATTGATGTATAAGCACAAAC 57.160 29.630 0.00 0.00 30.84 2.93
2127 2248 9.008965 ACTGTAATTGATGTATAAGCACAAACA 57.991 29.630 0.00 0.00 30.84 2.83
2128 2249 9.277565 CTGTAATTGATGTATAAGCACAAACAC 57.722 33.333 0.00 0.00 30.84 3.32
2129 2250 7.960195 TGTAATTGATGTATAAGCACAAACACG 59.040 33.333 0.00 0.00 30.84 4.49
2130 2251 4.335082 TGATGTATAAGCACAAACACGC 57.665 40.909 0.00 0.00 30.84 5.34
2131 2252 4.000325 TGATGTATAAGCACAAACACGCT 59.000 39.130 0.00 0.00 41.20 5.07
2132 2253 3.804518 TGTATAAGCACAAACACGCTG 57.195 42.857 0.00 0.00 38.82 5.18
2133 2254 2.095969 TGTATAAGCACAAACACGCTGC 60.096 45.455 0.00 0.00 38.82 5.25
2134 2255 0.240945 ATAAGCACAAACACGCTGCC 59.759 50.000 0.00 0.00 38.82 4.85
2135 2256 2.111932 TAAGCACAAACACGCTGCCG 62.112 55.000 0.00 0.00 38.82 5.69
2155 2276 4.861210 CCGTAGTGGCACATTTTTAAACA 58.139 39.130 21.41 0.00 44.52 2.83
2156 2277 4.915085 CCGTAGTGGCACATTTTTAAACAG 59.085 41.667 21.41 0.00 44.52 3.16
2157 2278 5.278071 CCGTAGTGGCACATTTTTAAACAGA 60.278 40.000 21.41 0.00 44.52 3.41
2158 2279 6.202937 CGTAGTGGCACATTTTTAAACAGAA 58.797 36.000 21.41 0.00 44.52 3.02
2159 2280 6.693545 CGTAGTGGCACATTTTTAAACAGAAA 59.306 34.615 21.41 0.00 44.52 2.52
2160 2281 6.902224 AGTGGCACATTTTTAAACAGAAAC 57.098 33.333 21.41 0.00 44.52 2.78
2161 2282 6.402222 AGTGGCACATTTTTAAACAGAAACA 58.598 32.000 21.41 0.00 44.52 2.83
2162 2283 6.876257 AGTGGCACATTTTTAAACAGAAACAA 59.124 30.769 21.41 0.00 44.52 2.83
2163 2284 7.389053 AGTGGCACATTTTTAAACAGAAACAAA 59.611 29.630 21.41 0.00 44.52 2.83
2164 2285 8.017946 GTGGCACATTTTTAAACAGAAACAAAA 58.982 29.630 13.86 0.00 44.52 2.44
2165 2286 8.233190 TGGCACATTTTTAAACAGAAACAAAAG 58.767 29.630 0.00 0.00 0.00 2.27
2166 2287 8.447053 GGCACATTTTTAAACAGAAACAAAAGA 58.553 29.630 0.00 0.00 0.00 2.52
2167 2288 9.986833 GCACATTTTTAAACAGAAACAAAAGAT 57.013 25.926 0.00 0.00 0.00 2.40
2170 2291 9.848172 CATTTTTAAACAGAAACAAAAGATCCG 57.152 29.630 0.00 0.00 0.00 4.18
2171 2292 7.458038 TTTTAAACAGAAACAAAAGATCCGC 57.542 32.000 0.00 0.00 0.00 5.54
2172 2293 3.643159 AACAGAAACAAAAGATCCGCC 57.357 42.857 0.00 0.00 0.00 6.13
2173 2294 2.863809 ACAGAAACAAAAGATCCGCCT 58.136 42.857 0.00 0.00 0.00 5.52
2174 2295 2.814336 ACAGAAACAAAAGATCCGCCTC 59.186 45.455 0.00 0.00 0.00 4.70
2175 2296 2.813754 CAGAAACAAAAGATCCGCCTCA 59.186 45.455 0.00 0.00 0.00 3.86
2176 2297 3.441572 CAGAAACAAAAGATCCGCCTCAT 59.558 43.478 0.00 0.00 0.00 2.90
2177 2298 3.691609 AGAAACAAAAGATCCGCCTCATC 59.308 43.478 0.00 0.00 0.00 2.92
2178 2299 2.044123 ACAAAAGATCCGCCTCATCC 57.956 50.000 0.00 0.00 0.00 3.51
2179 2300 1.281867 ACAAAAGATCCGCCTCATCCA 59.718 47.619 0.00 0.00 0.00 3.41
2180 2301 2.092212 ACAAAAGATCCGCCTCATCCAT 60.092 45.455 0.00 0.00 0.00 3.41
2181 2302 2.954318 CAAAAGATCCGCCTCATCCATT 59.046 45.455 0.00 0.00 0.00 3.16
2182 2303 4.136796 CAAAAGATCCGCCTCATCCATTA 58.863 43.478 0.00 0.00 0.00 1.90
2183 2304 4.437682 AAAGATCCGCCTCATCCATTAA 57.562 40.909 0.00 0.00 0.00 1.40
2184 2305 4.647564 AAGATCCGCCTCATCCATTAAT 57.352 40.909 0.00 0.00 0.00 1.40
2185 2306 4.647564 AGATCCGCCTCATCCATTAATT 57.352 40.909 0.00 0.00 0.00 1.40
2186 2307 5.762179 AGATCCGCCTCATCCATTAATTA 57.238 39.130 0.00 0.00 0.00 1.40
2187 2308 6.126863 AGATCCGCCTCATCCATTAATTAA 57.873 37.500 0.00 0.00 0.00 1.40
2188 2309 6.176183 AGATCCGCCTCATCCATTAATTAAG 58.824 40.000 3.94 0.00 0.00 1.85
2189 2310 4.072131 TCCGCCTCATCCATTAATTAAGC 58.928 43.478 3.94 0.00 0.00 3.09
2190 2311 3.820467 CCGCCTCATCCATTAATTAAGCA 59.180 43.478 3.94 0.00 0.00 3.91
2191 2312 4.083110 CCGCCTCATCCATTAATTAAGCAG 60.083 45.833 3.94 0.00 0.00 4.24
2192 2313 4.756642 CGCCTCATCCATTAATTAAGCAGA 59.243 41.667 3.94 1.16 0.00 4.26
2193 2314 5.239306 CGCCTCATCCATTAATTAAGCAGAA 59.761 40.000 3.94 0.00 0.00 3.02
2194 2315 6.238731 CGCCTCATCCATTAATTAAGCAGAAA 60.239 38.462 3.94 0.00 0.00 2.52
2195 2316 7.491682 GCCTCATCCATTAATTAAGCAGAAAA 58.508 34.615 3.94 0.00 0.00 2.29
2196 2317 7.650903 GCCTCATCCATTAATTAAGCAGAAAAG 59.349 37.037 3.94 3.23 0.00 2.27
2197 2318 8.906867 CCTCATCCATTAATTAAGCAGAAAAGA 58.093 33.333 3.94 1.40 0.00 2.52
2207 2328 8.422577 AATTAAGCAGAAAAGAATTACCCAGT 57.577 30.769 0.00 0.00 0.00 4.00
2208 2329 7.833285 TTAAGCAGAAAAGAATTACCCAGTT 57.167 32.000 0.00 0.00 0.00 3.16
2209 2330 8.927675 TTAAGCAGAAAAGAATTACCCAGTTA 57.072 30.769 0.00 0.00 0.00 2.24
2210 2331 7.833285 AAGCAGAAAAGAATTACCCAGTTAA 57.167 32.000 0.00 0.00 0.00 2.01
2211 2332 8.422577 AAGCAGAAAAGAATTACCCAGTTAAT 57.577 30.769 0.00 0.00 0.00 1.40
2212 2333 8.422577 AGCAGAAAAGAATTACCCAGTTAATT 57.577 30.769 0.00 0.00 0.00 1.40
2213 2334 9.528489 AGCAGAAAAGAATTACCCAGTTAATTA 57.472 29.630 0.00 0.00 0.00 1.40
2225 2346 7.920160 ACCCAGTTAATTAATGCAAAATTGG 57.080 32.000 16.57 12.24 0.00 3.16
2226 2347 7.457561 ACCCAGTTAATTAATGCAAAATTGGT 58.542 30.769 16.57 12.70 0.00 3.67
2227 2348 7.941790 ACCCAGTTAATTAATGCAAAATTGGTT 59.058 29.630 16.57 1.07 0.00 3.67
2228 2349 8.235905 CCCAGTTAATTAATGCAAAATTGGTTG 58.764 33.333 16.57 12.05 0.00 3.77
2229 2350 8.997323 CCAGTTAATTAATGCAAAATTGGTTGA 58.003 29.630 16.57 0.00 0.00 3.18
2236 2357 8.571461 TTAATGCAAAATTGGTTGAAAATTGC 57.429 26.923 0.00 0.00 0.00 3.56
2237 2358 5.831702 TGCAAAATTGGTTGAAAATTGCT 57.168 30.435 8.75 0.00 0.00 3.91
2238 2359 6.932356 TGCAAAATTGGTTGAAAATTGCTA 57.068 29.167 8.75 0.00 0.00 3.49
2239 2360 7.507733 TGCAAAATTGGTTGAAAATTGCTAT 57.492 28.000 8.75 0.00 0.00 2.97
2240 2361 8.613060 TGCAAAATTGGTTGAAAATTGCTATA 57.387 26.923 8.75 0.00 0.00 1.31
2241 2362 9.060347 TGCAAAATTGGTTGAAAATTGCTATAA 57.940 25.926 8.75 0.00 0.00 0.98
2245 2366 8.647143 AATTGGTTGAAAATTGCTATAATCCG 57.353 30.769 0.00 0.00 0.00 4.18
2246 2367 5.587289 TGGTTGAAAATTGCTATAATCCGC 58.413 37.500 0.00 0.00 0.00 5.54
2247 2368 5.359576 TGGTTGAAAATTGCTATAATCCGCT 59.640 36.000 0.00 0.00 0.00 5.52
2248 2369 5.687285 GGTTGAAAATTGCTATAATCCGCTG 59.313 40.000 0.00 0.00 0.00 5.18
2249 2370 6.459573 GGTTGAAAATTGCTATAATCCGCTGA 60.460 38.462 0.00 0.00 0.00 4.26
2250 2371 6.304356 TGAAAATTGCTATAATCCGCTGAG 57.696 37.500 0.00 0.00 0.00 3.35
2251 2372 4.756084 AAATTGCTATAATCCGCTGAGC 57.244 40.909 0.00 0.00 0.00 4.26
2252 2373 2.908688 TTGCTATAATCCGCTGAGCA 57.091 45.000 4.88 0.00 41.23 4.26
2253 2374 2.445565 TGCTATAATCCGCTGAGCAG 57.554 50.000 4.88 0.00 38.20 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.667043 TTTATTGATTATCTGCCGTGTATCC 57.333 36.000 0.00 0.00 0.00 2.59
1 2 8.774586 ACTTTTATTGATTATCTGCCGTGTATC 58.225 33.333 0.00 0.00 0.00 2.24
2 3 8.677148 ACTTTTATTGATTATCTGCCGTGTAT 57.323 30.769 0.00 0.00 0.00 2.29
3 4 8.500753 AACTTTTATTGATTATCTGCCGTGTA 57.499 30.769 0.00 0.00 0.00 2.90
4 5 7.391148 AACTTTTATTGATTATCTGCCGTGT 57.609 32.000 0.00 0.00 0.00 4.49
5 6 8.687824 AAAACTTTTATTGATTATCTGCCGTG 57.312 30.769 0.00 0.00 0.00 4.94
6 7 8.519526 TGAAAACTTTTATTGATTATCTGCCGT 58.480 29.630 0.00 0.00 0.00 5.68
7 8 8.909708 TGAAAACTTTTATTGATTATCTGCCG 57.090 30.769 0.00 0.00 0.00 5.69
86 87 1.200252 CGACCCACACACACACAAAAA 59.800 47.619 0.00 0.00 0.00 1.94
87 88 0.805614 CGACCCACACACACACAAAA 59.194 50.000 0.00 0.00 0.00 2.44
88 89 0.036294 TCGACCCACACACACACAAA 60.036 50.000 0.00 0.00 0.00 2.83
89 90 0.036294 TTCGACCCACACACACACAA 60.036 50.000 0.00 0.00 0.00 3.33
90 91 0.036294 TTTCGACCCACACACACACA 60.036 50.000 0.00 0.00 0.00 3.72
91 92 0.655733 CTTTCGACCCACACACACAC 59.344 55.000 0.00 0.00 0.00 3.82
92 93 0.250793 ACTTTCGACCCACACACACA 59.749 50.000 0.00 0.00 0.00 3.72
93 94 0.655733 CACTTTCGACCCACACACAC 59.344 55.000 0.00 0.00 0.00 3.82
94 95 0.537653 TCACTTTCGACCCACACACA 59.462 50.000 0.00 0.00 0.00 3.72
95 96 1.217882 CTCACTTTCGACCCACACAC 58.782 55.000 0.00 0.00 0.00 3.82
96 97 0.828022 ACTCACTTTCGACCCACACA 59.172 50.000 0.00 0.00 0.00 3.72
97 98 1.499049 GACTCACTTTCGACCCACAC 58.501 55.000 0.00 0.00 0.00 3.82
98 99 0.391597 GGACTCACTTTCGACCCACA 59.608 55.000 0.00 0.00 0.00 4.17
99 100 0.391597 TGGACTCACTTTCGACCCAC 59.608 55.000 0.00 0.00 0.00 4.61
100 101 0.391597 GTGGACTCACTTTCGACCCA 59.608 55.000 0.00 0.00 40.58 4.51
101 102 0.391597 TGTGGACTCACTTTCGACCC 59.608 55.000 0.00 0.00 43.94 4.46
102 103 1.499049 GTGTGGACTCACTTTCGACC 58.501 55.000 0.00 0.00 43.94 4.79
103 104 1.129326 CGTGTGGACTCACTTTCGAC 58.871 55.000 3.45 0.00 43.94 4.20
104 105 0.031585 CCGTGTGGACTCACTTTCGA 59.968 55.000 3.45 0.00 43.94 3.71
105 106 0.031585 TCCGTGTGGACTCACTTTCG 59.968 55.000 3.45 0.00 43.94 3.46
106 107 3.980583 TCCGTGTGGACTCACTTTC 57.019 52.632 3.45 0.00 43.94 2.62
116 117 2.979814 TACAATCTCCATCCGTGTGG 57.020 50.000 0.00 0.00 40.76 4.17
117 118 4.058721 TGATACAATCTCCATCCGTGTG 57.941 45.455 0.00 0.00 0.00 3.82
118 119 4.697514 CTTGATACAATCTCCATCCGTGT 58.302 43.478 0.00 0.00 0.00 4.49
119 120 3.496130 GCTTGATACAATCTCCATCCGTG 59.504 47.826 0.00 0.00 0.00 4.94
120 121 3.495100 GGCTTGATACAATCTCCATCCGT 60.495 47.826 0.00 0.00 0.00 4.69
121 122 3.070018 GGCTTGATACAATCTCCATCCG 58.930 50.000 0.00 0.00 0.00 4.18
122 123 3.181440 TGGGCTTGATACAATCTCCATCC 60.181 47.826 0.00 0.00 0.00 3.51
123 124 3.817647 GTGGGCTTGATACAATCTCCATC 59.182 47.826 0.00 0.00 0.00 3.51
124 125 3.461085 AGTGGGCTTGATACAATCTCCAT 59.539 43.478 0.00 0.00 0.00 3.41
125 126 2.846206 AGTGGGCTTGATACAATCTCCA 59.154 45.455 0.00 0.00 0.00 3.86
126 127 3.567478 AGTGGGCTTGATACAATCTCC 57.433 47.619 0.00 0.00 0.00 3.71
127 128 4.439289 GCAAAGTGGGCTTGATACAATCTC 60.439 45.833 0.00 0.00 34.71 2.75
128 129 3.445096 GCAAAGTGGGCTTGATACAATCT 59.555 43.478 0.00 0.00 34.71 2.40
129 130 3.445096 AGCAAAGTGGGCTTGATACAATC 59.555 43.478 0.00 0.00 38.81 2.67
130 131 3.434309 AGCAAAGTGGGCTTGATACAAT 58.566 40.909 0.00 0.00 38.81 2.71
131 132 2.875296 AGCAAAGTGGGCTTGATACAA 58.125 42.857 0.00 0.00 38.81 2.41
132 133 2.584835 AGCAAAGTGGGCTTGATACA 57.415 45.000 0.00 0.00 38.81 2.29
139 140 0.829182 CCTGGAAAGCAAAGTGGGCT 60.829 55.000 0.00 0.00 45.15 5.19
140 141 1.667722 CCTGGAAAGCAAAGTGGGC 59.332 57.895 0.00 0.00 0.00 5.36
141 142 0.829182 AGCCTGGAAAGCAAAGTGGG 60.829 55.000 0.00 0.00 0.00 4.61
142 143 1.000171 GAAGCCTGGAAAGCAAAGTGG 60.000 52.381 0.00 0.00 0.00 4.00
143 144 1.000171 GGAAGCCTGGAAAGCAAAGTG 60.000 52.381 0.00 0.00 0.00 3.16
144 145 1.332195 GGAAGCCTGGAAAGCAAAGT 58.668 50.000 0.00 0.00 0.00 2.66
145 146 1.271656 CTGGAAGCCTGGAAAGCAAAG 59.728 52.381 0.00 0.00 0.00 2.77
146 147 1.331214 CTGGAAGCCTGGAAAGCAAA 58.669 50.000 0.00 0.00 0.00 3.68
147 148 3.040965 CTGGAAGCCTGGAAAGCAA 57.959 52.632 0.00 0.00 0.00 3.91
148 149 4.828409 CTGGAAGCCTGGAAAGCA 57.172 55.556 0.00 0.00 0.00 3.91
190 192 1.562783 GGTGAGGTAGGAGAAGCAGT 58.437 55.000 0.00 0.00 0.00 4.40
201 203 1.726352 AGGTAAGGAAGGGGTGAGGTA 59.274 52.381 0.00 0.00 0.00 3.08
202 204 0.496841 AGGTAAGGAAGGGGTGAGGT 59.503 55.000 0.00 0.00 0.00 3.85
207 217 2.893153 GCTGTAGAGGTAAGGAAGGGGT 60.893 54.545 0.00 0.00 0.00 4.95
243 253 1.641677 GCTGTCTTTGTCGTGCGTT 59.358 52.632 0.00 0.00 0.00 4.84
244 254 2.244651 GGCTGTCTTTGTCGTGCGT 61.245 57.895 0.00 0.00 0.00 5.24
246 256 2.551270 CGGCTGTCTTTGTCGTGC 59.449 61.111 0.00 0.00 0.00 5.34
247 257 2.551270 GCGGCTGTCTTTGTCGTG 59.449 61.111 0.00 0.00 34.76 4.35
248 258 2.665185 GGCGGCTGTCTTTGTCGT 60.665 61.111 0.00 0.00 34.76 4.34
250 260 3.423154 CCGGCGGCTGTCTTTGTC 61.423 66.667 15.42 0.00 0.00 3.18
340 366 4.403113 GGAGTAGAAAGTAGGAGAGGTTGG 59.597 50.000 0.00 0.00 0.00 3.77
403 429 1.123928 CCCCATCAGACAGACCCTAC 58.876 60.000 0.00 0.00 0.00 3.18
404 430 0.031111 CCCCCATCAGACAGACCCTA 60.031 60.000 0.00 0.00 0.00 3.53
405 431 1.307343 CCCCCATCAGACAGACCCT 60.307 63.158 0.00 0.00 0.00 4.34
406 432 3.049080 GCCCCCATCAGACAGACCC 62.049 68.421 0.00 0.00 0.00 4.46
463 489 0.324275 TGGCTACTGGATTTTGGGGC 60.324 55.000 0.00 0.00 0.00 5.80
466 492 2.360165 GCTCATGGCTACTGGATTTTGG 59.640 50.000 0.00 0.00 38.06 3.28
564 590 1.244019 ACTGCACCCAAATCCTTCGC 61.244 55.000 0.00 0.00 0.00 4.70
566 592 1.270550 CACACTGCACCCAAATCCTTC 59.729 52.381 0.00 0.00 0.00 3.46
712 758 0.745845 AAGCTAACCGGCTCTGCATG 60.746 55.000 0.00 0.00 42.24 4.06
724 770 3.045601 TGAGGCAGTTCTGAAGCTAAC 57.954 47.619 3.84 0.00 0.00 2.34
729 775 5.640189 ATCAAATTGAGGCAGTTCTGAAG 57.360 39.130 1.10 0.00 0.00 3.02
745 791 7.220030 ACTGGAGCGAAATACTGATATCAAAT 58.780 34.615 6.90 0.78 0.00 2.32
839 912 6.749118 GCAAAATGGTAATGCTATATGCTAGC 59.251 38.462 8.10 8.10 43.37 3.42
856 929 0.600782 AGCGGTGCAAAGCAAAATGG 60.601 50.000 15.69 0.00 41.47 3.16
891 968 4.043750 CCGCGCATTCAACAATATGAATT 58.956 39.130 8.75 0.00 45.39 2.17
909 986 7.734538 AATCTAAAAATTCATTTGTACCGCG 57.265 32.000 0.00 0.00 0.00 6.46
912 989 9.936759 TGGGAAATCTAAAAATTCATTTGTACC 57.063 29.630 0.00 0.00 0.00 3.34
927 1005 2.352388 CGAAGCCGTTGGGAAATCTAA 58.648 47.619 0.00 0.00 34.06 2.10
959 1037 5.009410 AGCTGAACCTGACAAGAAAATTCAG 59.991 40.000 6.70 6.70 42.77 3.02
985 1063 0.459899 TTCATCTGGTCCATCGTCCG 59.540 55.000 0.00 0.00 0.00 4.79
1021 1099 2.509561 GGCCTTCGCTCTCGGTTC 60.510 66.667 0.00 0.00 36.13 3.62
1051 1129 1.550976 GACTGTGAACGATTCCCCTCT 59.449 52.381 0.00 0.00 0.00 3.69
1110 1189 0.883814 CCATGCTCTTCTCCCGCATC 60.884 60.000 0.00 0.00 42.03 3.91
1114 1193 0.467384 ATCACCATGCTCTTCTCCCG 59.533 55.000 0.00 0.00 0.00 5.14
1142 1221 2.727916 GCGTTGTGCTTGGTTATGTAGC 60.728 50.000 0.00 0.00 41.73 3.58
1233 1312 5.026121 TGCTTCCTAGATTTCTTCAGAGGA 58.974 41.667 0.00 0.00 37.11 3.71
1236 1315 5.128499 CCTCTGCTTCCTAGATTTCTTCAGA 59.872 44.000 0.00 0.00 0.00 3.27
1250 1329 0.179097 GGACGATCACCTCTGCTTCC 60.179 60.000 0.00 0.00 0.00 3.46
1259 1338 4.561105 GGATGAGATTTAGGACGATCACC 58.439 47.826 0.00 0.00 0.00 4.02
1282 1373 3.797256 ACTAACAAAGAGCGCGATACATC 59.203 43.478 12.10 0.00 0.00 3.06
1285 1376 2.534757 GGACTAACAAAGAGCGCGATAC 59.465 50.000 12.10 0.00 0.00 2.24
1291 1382 1.275291 TGAGGGGACTAACAAAGAGCG 59.725 52.381 0.00 0.00 44.43 5.03
1299 1390 6.098409 TCTGATACTTGAATGAGGGGACTAAC 59.902 42.308 0.00 0.00 44.43 2.34
1311 1402 6.922247 CAGCATGTTCTCTGATACTTGAAT 57.078 37.500 0.00 0.00 32.26 2.57
1487 1605 7.039504 ACTGAAGATGGACATTTAACAGCAAAT 60.040 33.333 0.00 0.00 0.00 2.32
1611 1729 3.943381 CAGTTGGATGCATGTGTACAGAT 59.057 43.478 2.46 0.00 0.00 2.90
1628 1746 5.245977 AGAATCATTTTTACCCCCACAGTTG 59.754 40.000 0.00 0.00 0.00 3.16
1639 1757 7.377766 TGGAGTGTGCTAGAATCATTTTTAC 57.622 36.000 0.00 0.00 0.00 2.01
1640 1758 7.828717 TGATGGAGTGTGCTAGAATCATTTTTA 59.171 33.333 0.00 0.00 0.00 1.52
1648 1768 3.264193 TGGTTGATGGAGTGTGCTAGAAT 59.736 43.478 0.00 0.00 0.00 2.40
1652 1772 2.305635 ACATGGTTGATGGAGTGTGCTA 59.694 45.455 0.00 0.00 36.23 3.49
1699 1819 8.021396 GGCTTGGAAACATAGTTTTAACACTAG 58.979 37.037 7.50 3.20 42.32 2.57
1734 1855 7.176589 ACCACAAGATAAAAGTTTCCACAAA 57.823 32.000 0.00 0.00 0.00 2.83
1737 1858 5.983118 CCAACCACAAGATAAAAGTTTCCAC 59.017 40.000 0.00 0.00 0.00 4.02
1743 1864 5.654650 TGTGAACCAACCACAAGATAAAAGT 59.345 36.000 0.00 0.00 41.07 2.66
1747 1868 7.402054 AGATATGTGAACCAACCACAAGATAA 58.598 34.615 0.00 0.00 46.12 1.75
1749 1870 5.819991 AGATATGTGAACCAACCACAAGAT 58.180 37.500 0.00 0.00 46.12 2.40
1750 1871 5.241403 AGATATGTGAACCAACCACAAGA 57.759 39.130 0.00 0.00 46.12 3.02
1758 1879 6.048732 TGCTGAGTAAGATATGTGAACCAA 57.951 37.500 0.00 0.00 0.00 3.67
1800 1921 3.066203 ACGTCAGGGTTTTCAACATGTTC 59.934 43.478 8.48 0.00 0.00 3.18
1822 1943 5.470098 GGTTTTCAACATGTTCAGCTAGAGA 59.530 40.000 8.48 0.00 0.00 3.10
1823 1944 5.335191 GGGTTTTCAACATGTTCAGCTAGAG 60.335 44.000 8.48 0.00 0.00 2.43
1824 1945 4.518970 GGGTTTTCAACATGTTCAGCTAGA 59.481 41.667 8.48 0.00 0.00 2.43
1825 1946 4.520492 AGGGTTTTCAACATGTTCAGCTAG 59.480 41.667 8.48 0.00 0.00 3.42
1826 1947 4.278170 CAGGGTTTTCAACATGTTCAGCTA 59.722 41.667 8.48 0.00 0.00 3.32
1827 1948 3.068590 CAGGGTTTTCAACATGTTCAGCT 59.931 43.478 8.48 0.00 0.00 4.24
1828 1949 3.068024 TCAGGGTTTTCAACATGTTCAGC 59.932 43.478 8.48 2.92 0.00 4.26
1829 1950 4.916983 TCAGGGTTTTCAACATGTTCAG 57.083 40.909 8.48 0.00 0.00 3.02
1830 1951 4.039004 CCATCAGGGTTTTCAACATGTTCA 59.961 41.667 8.48 0.00 0.00 3.18
1831 1952 4.559153 CCATCAGGGTTTTCAACATGTTC 58.441 43.478 8.48 0.00 0.00 3.18
1832 1953 3.244181 GCCATCAGGGTTTTCAACATGTT 60.244 43.478 4.92 4.92 39.65 2.71
1833 1954 2.299867 GCCATCAGGGTTTTCAACATGT 59.700 45.455 0.00 0.00 39.65 3.21
1834 1955 2.354003 GGCCATCAGGGTTTTCAACATG 60.354 50.000 0.00 0.00 39.65 3.21
1835 1956 1.901833 GGCCATCAGGGTTTTCAACAT 59.098 47.619 0.00 0.00 39.65 2.71
1836 1957 1.133199 AGGCCATCAGGGTTTTCAACA 60.133 47.619 5.01 0.00 39.65 3.33
1837 1958 1.632589 AGGCCATCAGGGTTTTCAAC 58.367 50.000 5.01 0.00 39.65 3.18
1838 1959 3.756082 ATAGGCCATCAGGGTTTTCAA 57.244 42.857 5.01 0.00 39.65 2.69
1839 1960 3.245586 ACAATAGGCCATCAGGGTTTTCA 60.246 43.478 5.01 0.00 39.65 2.69
1840 1961 3.131046 CACAATAGGCCATCAGGGTTTTC 59.869 47.826 5.01 0.00 39.65 2.29
1841 1962 3.099141 CACAATAGGCCATCAGGGTTTT 58.901 45.455 5.01 0.00 39.65 2.43
1842 1963 2.738743 CACAATAGGCCATCAGGGTTT 58.261 47.619 5.01 0.00 39.65 3.27
1843 1964 1.686115 GCACAATAGGCCATCAGGGTT 60.686 52.381 5.01 0.00 39.65 4.11
1844 1965 0.106519 GCACAATAGGCCATCAGGGT 60.107 55.000 5.01 0.00 39.65 4.34
1845 1966 2.724520 GCACAATAGGCCATCAGGG 58.275 57.895 5.01 0.00 40.85 4.45
1860 1981 2.366916 AGCTAGAGATACCACATGGCAC 59.633 50.000 0.00 0.00 39.32 5.01
1861 1982 2.682594 AGCTAGAGATACCACATGGCA 58.317 47.619 0.00 0.00 39.32 4.92
1862 1983 3.760580 AAGCTAGAGATACCACATGGC 57.239 47.619 0.00 0.00 39.32 4.40
1863 1984 6.161855 TGTTAAGCTAGAGATACCACATGG 57.838 41.667 0.00 0.00 42.17 3.66
1864 1985 6.584184 CGATGTTAAGCTAGAGATACCACATG 59.416 42.308 0.00 0.00 0.00 3.21
1865 1986 6.294787 CCGATGTTAAGCTAGAGATACCACAT 60.295 42.308 0.00 0.00 0.00 3.21
1866 1987 5.009710 CCGATGTTAAGCTAGAGATACCACA 59.990 44.000 0.00 0.00 0.00 4.17
1867 1988 5.009811 ACCGATGTTAAGCTAGAGATACCAC 59.990 44.000 0.00 0.00 0.00 4.16
1868 1989 5.138276 ACCGATGTTAAGCTAGAGATACCA 58.862 41.667 0.00 0.00 0.00 3.25
1869 1990 5.708877 ACCGATGTTAAGCTAGAGATACC 57.291 43.478 0.00 0.00 0.00 2.73
1870 1991 7.646314 TGTTACCGATGTTAAGCTAGAGATAC 58.354 38.462 0.00 0.00 0.00 2.24
1871 1992 7.812690 TGTTACCGATGTTAAGCTAGAGATA 57.187 36.000 0.00 0.00 0.00 1.98
1872 1993 6.710597 TGTTACCGATGTTAAGCTAGAGAT 57.289 37.500 0.00 0.00 0.00 2.75
1873 1994 6.519679 TTGTTACCGATGTTAAGCTAGAGA 57.480 37.500 0.00 0.00 0.00 3.10
1874 1995 6.588756 TGTTTGTTACCGATGTTAAGCTAGAG 59.411 38.462 0.00 0.00 0.00 2.43
1875 1996 6.366877 GTGTTTGTTACCGATGTTAAGCTAGA 59.633 38.462 0.00 0.00 0.00 2.43
1876 1997 6.367969 AGTGTTTGTTACCGATGTTAAGCTAG 59.632 38.462 0.00 0.00 0.00 3.42
1877 1998 6.225318 AGTGTTTGTTACCGATGTTAAGCTA 58.775 36.000 0.00 0.00 0.00 3.32
1878 1999 5.061179 AGTGTTTGTTACCGATGTTAAGCT 58.939 37.500 0.00 0.00 0.00 3.74
1879 2000 5.352643 AGTGTTTGTTACCGATGTTAAGC 57.647 39.130 0.00 0.00 0.00 3.09
1880 2001 8.932791 AGAATAGTGTTTGTTACCGATGTTAAG 58.067 33.333 0.00 0.00 0.00 1.85
1881 2002 8.714179 CAGAATAGTGTTTGTTACCGATGTTAA 58.286 33.333 0.00 0.00 0.00 2.01
1882 2003 7.874016 ACAGAATAGTGTTTGTTACCGATGTTA 59.126 33.333 0.00 0.00 0.00 2.41
1883 2004 6.708949 ACAGAATAGTGTTTGTTACCGATGTT 59.291 34.615 0.00 0.00 0.00 2.71
1884 2005 6.228258 ACAGAATAGTGTTTGTTACCGATGT 58.772 36.000 0.00 0.00 0.00 3.06
1885 2006 6.590292 AGACAGAATAGTGTTTGTTACCGATG 59.410 38.462 0.00 0.00 0.00 3.84
1886 2007 6.590292 CAGACAGAATAGTGTTTGTTACCGAT 59.410 38.462 0.00 0.00 29.90 4.18
1887 2008 5.924254 CAGACAGAATAGTGTTTGTTACCGA 59.076 40.000 0.00 0.00 29.90 4.69
1888 2009 5.924254 TCAGACAGAATAGTGTTTGTTACCG 59.076 40.000 0.00 0.00 34.81 4.02
1889 2010 7.225931 TGTTCAGACAGAATAGTGTTTGTTACC 59.774 37.037 0.00 0.00 38.76 2.85
1890 2011 8.138365 TGTTCAGACAGAATAGTGTTTGTTAC 57.862 34.615 0.00 0.00 38.76 2.50
1906 2027 6.223852 GGAGTTTCTGTATTCTGTTCAGACA 58.776 40.000 1.72 0.00 37.84 3.41
1907 2028 5.346281 CGGAGTTTCTGTATTCTGTTCAGAC 59.654 44.000 1.72 0.00 37.84 3.51
1908 2029 5.243060 TCGGAGTTTCTGTATTCTGTTCAGA 59.757 40.000 0.00 0.00 36.59 3.27
1909 2030 5.346281 GTCGGAGTTTCTGTATTCTGTTCAG 59.654 44.000 0.00 0.00 0.00 3.02
1910 2031 5.221362 TGTCGGAGTTTCTGTATTCTGTTCA 60.221 40.000 0.00 0.00 0.00 3.18
1911 2032 5.227908 TGTCGGAGTTTCTGTATTCTGTTC 58.772 41.667 0.00 0.00 0.00 3.18
1912 2033 5.209818 TGTCGGAGTTTCTGTATTCTGTT 57.790 39.130 0.00 0.00 0.00 3.16
1913 2034 4.866508 TGTCGGAGTTTCTGTATTCTGT 57.133 40.909 0.00 0.00 0.00 3.41
1914 2035 4.988540 TGTTGTCGGAGTTTCTGTATTCTG 59.011 41.667 0.00 0.00 0.00 3.02
1915 2036 5.209818 TGTTGTCGGAGTTTCTGTATTCT 57.790 39.130 0.00 0.00 0.00 2.40
1916 2037 5.637810 TCATGTTGTCGGAGTTTCTGTATTC 59.362 40.000 0.00 0.00 0.00 1.75
1917 2038 5.547465 TCATGTTGTCGGAGTTTCTGTATT 58.453 37.500 0.00 0.00 0.00 1.89
1918 2039 5.147330 TCATGTTGTCGGAGTTTCTGTAT 57.853 39.130 0.00 0.00 0.00 2.29
1919 2040 4.594123 TCATGTTGTCGGAGTTTCTGTA 57.406 40.909 0.00 0.00 0.00 2.74
1920 2041 3.469008 TCATGTTGTCGGAGTTTCTGT 57.531 42.857 0.00 0.00 0.00 3.41
1921 2042 3.809832 AGTTCATGTTGTCGGAGTTTCTG 59.190 43.478 0.00 0.00 0.00 3.02
1922 2043 4.058817 GAGTTCATGTTGTCGGAGTTTCT 58.941 43.478 0.00 0.00 0.00 2.52
1923 2044 3.807622 TGAGTTCATGTTGTCGGAGTTTC 59.192 43.478 0.00 0.00 0.00 2.78
1924 2045 3.804036 TGAGTTCATGTTGTCGGAGTTT 58.196 40.909 0.00 0.00 0.00 2.66
1925 2046 3.469008 TGAGTTCATGTTGTCGGAGTT 57.531 42.857 0.00 0.00 0.00 3.01
1926 2047 3.469008 TTGAGTTCATGTTGTCGGAGT 57.531 42.857 0.00 0.00 0.00 3.85
1927 2048 5.149273 CAAATTGAGTTCATGTTGTCGGAG 58.851 41.667 0.00 0.00 0.00 4.63
1928 2049 4.023279 CCAAATTGAGTTCATGTTGTCGGA 60.023 41.667 0.00 0.00 0.00 4.55
1929 2050 4.229096 CCAAATTGAGTTCATGTTGTCGG 58.771 43.478 0.00 0.00 0.00 4.79
1930 2051 4.023279 TCCCAAATTGAGTTCATGTTGTCG 60.023 41.667 0.00 0.00 0.00 4.35
1931 2052 5.452078 TCCCAAATTGAGTTCATGTTGTC 57.548 39.130 0.00 0.00 0.00 3.18
1932 2053 6.225318 CAATCCCAAATTGAGTTCATGTTGT 58.775 36.000 0.00 0.00 0.00 3.32
1933 2054 5.640357 CCAATCCCAAATTGAGTTCATGTTG 59.360 40.000 0.00 0.00 0.00 3.33
1934 2055 5.543405 TCCAATCCCAAATTGAGTTCATGTT 59.457 36.000 0.00 0.00 0.00 2.71
1935 2056 5.085920 TCCAATCCCAAATTGAGTTCATGT 58.914 37.500 0.00 0.00 0.00 3.21
1936 2057 5.664294 TCCAATCCCAAATTGAGTTCATG 57.336 39.130 0.00 0.00 0.00 3.07
1937 2058 5.337813 GCTTCCAATCCCAAATTGAGTTCAT 60.338 40.000 0.00 0.00 0.00 2.57
1938 2059 4.021192 GCTTCCAATCCCAAATTGAGTTCA 60.021 41.667 0.00 0.00 0.00 3.18
1939 2060 4.021192 TGCTTCCAATCCCAAATTGAGTTC 60.021 41.667 0.00 0.00 0.00 3.01
1940 2061 3.903090 TGCTTCCAATCCCAAATTGAGTT 59.097 39.130 0.00 0.00 0.00 3.01
1941 2062 3.509442 TGCTTCCAATCCCAAATTGAGT 58.491 40.909 0.00 0.00 0.00 3.41
1942 2063 4.248058 GTTGCTTCCAATCCCAAATTGAG 58.752 43.478 0.00 0.00 32.75 3.02
1943 2064 3.645212 TGTTGCTTCCAATCCCAAATTGA 59.355 39.130 0.00 0.00 32.75 2.57
1944 2065 3.747529 GTGTTGCTTCCAATCCCAAATTG 59.252 43.478 0.00 0.00 32.75 2.32
1945 2066 3.390639 TGTGTTGCTTCCAATCCCAAATT 59.609 39.130 0.00 0.00 32.75 1.82
1946 2067 2.971330 TGTGTTGCTTCCAATCCCAAAT 59.029 40.909 0.00 0.00 32.75 2.32
1947 2068 2.102252 GTGTGTTGCTTCCAATCCCAAA 59.898 45.455 0.00 0.00 32.75 3.28
1948 2069 1.686052 GTGTGTTGCTTCCAATCCCAA 59.314 47.619 0.00 0.00 32.75 4.12
1949 2070 1.133513 AGTGTGTTGCTTCCAATCCCA 60.134 47.619 0.00 0.00 32.75 4.37
1950 2071 1.620822 AGTGTGTTGCTTCCAATCCC 58.379 50.000 0.00 0.00 32.75 3.85
1951 2072 2.162408 GCTAGTGTGTTGCTTCCAATCC 59.838 50.000 0.00 0.00 32.75 3.01
1952 2073 2.813754 TGCTAGTGTGTTGCTTCCAATC 59.186 45.455 0.00 0.00 32.75 2.67
1953 2074 2.554032 GTGCTAGTGTGTTGCTTCCAAT 59.446 45.455 0.00 0.00 32.75 3.16
1954 2075 1.946768 GTGCTAGTGTGTTGCTTCCAA 59.053 47.619 0.00 0.00 0.00 3.53
1955 2076 1.134250 TGTGCTAGTGTGTTGCTTCCA 60.134 47.619 0.00 0.00 0.00 3.53
1956 2077 1.593196 TGTGCTAGTGTGTTGCTTCC 58.407 50.000 0.00 0.00 0.00 3.46
1957 2078 2.549754 ACATGTGCTAGTGTGTTGCTTC 59.450 45.455 0.00 0.00 0.00 3.86
1958 2079 2.549754 GACATGTGCTAGTGTGTTGCTT 59.450 45.455 1.15 0.00 0.00 3.91
1959 2080 2.146342 GACATGTGCTAGTGTGTTGCT 58.854 47.619 1.15 0.00 0.00 3.91
1960 2081 1.872952 TGACATGTGCTAGTGTGTTGC 59.127 47.619 1.15 0.00 0.00 4.17
1961 2082 3.133691 AGTGACATGTGCTAGTGTGTTG 58.866 45.455 1.15 0.00 0.00 3.33
1962 2083 3.393800 GAGTGACATGTGCTAGTGTGTT 58.606 45.455 1.15 0.00 0.00 3.32
1963 2084 2.608016 CGAGTGACATGTGCTAGTGTGT 60.608 50.000 1.15 0.00 0.00 3.72
1964 2085 1.988467 CGAGTGACATGTGCTAGTGTG 59.012 52.381 1.15 0.00 0.00 3.82
1965 2086 1.886542 TCGAGTGACATGTGCTAGTGT 59.113 47.619 1.15 0.00 0.00 3.55
1966 2087 2.636768 TCGAGTGACATGTGCTAGTG 57.363 50.000 1.15 0.00 0.00 2.74
1967 2088 3.694566 TGTATCGAGTGACATGTGCTAGT 59.305 43.478 1.15 0.00 0.00 2.57
1968 2089 4.038361 GTGTATCGAGTGACATGTGCTAG 58.962 47.826 1.15 1.83 0.00 3.42
1969 2090 3.486875 CGTGTATCGAGTGACATGTGCTA 60.487 47.826 1.15 0.00 42.86 3.49
1970 2091 2.732282 CGTGTATCGAGTGACATGTGCT 60.732 50.000 1.15 0.21 42.86 4.40
1971 2092 1.583856 CGTGTATCGAGTGACATGTGC 59.416 52.381 1.15 0.00 42.86 4.57
1972 2093 2.863739 ACGTGTATCGAGTGACATGTG 58.136 47.619 17.30 7.27 42.72 3.21
1973 2094 2.228103 ACACGTGTATCGAGTGACATGT 59.772 45.455 21.98 13.96 44.66 3.21
1974 2095 2.863739 ACACGTGTATCGAGTGACATG 58.136 47.619 21.98 11.03 41.29 3.21
1975 2096 3.570926 AACACGTGTATCGAGTGACAT 57.429 42.857 23.69 0.00 41.91 3.06
1976 2097 3.302555 GAAACACGTGTATCGAGTGACA 58.697 45.455 23.69 1.46 41.91 3.58
1977 2098 2.660236 GGAAACACGTGTATCGAGTGAC 59.340 50.000 23.69 3.45 41.91 3.67
1978 2099 2.555325 AGGAAACACGTGTATCGAGTGA 59.445 45.455 23.69 0.00 41.91 3.41
1979 2100 2.915463 GAGGAAACACGTGTATCGAGTG 59.085 50.000 23.69 0.59 41.91 3.51
1980 2101 2.818432 AGAGGAAACACGTGTATCGAGT 59.182 45.455 23.69 1.22 44.31 4.18
1981 2102 3.119955 TGAGAGGAAACACGTGTATCGAG 60.120 47.826 23.69 0.00 42.86 4.04
1982 2103 2.815503 TGAGAGGAAACACGTGTATCGA 59.184 45.455 23.69 7.53 42.86 3.59
1983 2104 3.211803 TGAGAGGAAACACGTGTATCG 57.788 47.619 23.69 0.00 46.00 2.92
1984 2105 3.678548 GGTTGAGAGGAAACACGTGTATC 59.321 47.826 23.69 16.86 0.00 2.24
1985 2106 3.556423 GGGTTGAGAGGAAACACGTGTAT 60.556 47.826 23.69 9.58 0.00 2.29
1986 2107 2.224113 GGGTTGAGAGGAAACACGTGTA 60.224 50.000 23.69 0.00 0.00 2.90
1987 2108 1.474498 GGGTTGAGAGGAAACACGTGT 60.474 52.381 17.22 17.22 0.00 4.49
1988 2109 1.202651 AGGGTTGAGAGGAAACACGTG 60.203 52.381 15.48 15.48 36.02 4.49
1989 2110 1.129058 AGGGTTGAGAGGAAACACGT 58.871 50.000 0.00 0.00 36.02 4.49
1990 2111 1.512926 CAGGGTTGAGAGGAAACACG 58.487 55.000 0.00 0.00 36.02 4.49
1991 2112 1.202818 AGCAGGGTTGAGAGGAAACAC 60.203 52.381 0.00 0.00 0.00 3.32
1992 2113 1.140312 AGCAGGGTTGAGAGGAAACA 58.860 50.000 0.00 0.00 0.00 2.83
1993 2114 1.528129 CAGCAGGGTTGAGAGGAAAC 58.472 55.000 0.00 0.00 0.00 2.78
1994 2115 0.401738 CCAGCAGGGTTGAGAGGAAA 59.598 55.000 0.00 0.00 0.00 3.13
1995 2116 2.069776 CCAGCAGGGTTGAGAGGAA 58.930 57.895 0.00 0.00 0.00 3.36
1996 2117 2.596851 GCCAGCAGGGTTGAGAGGA 61.597 63.158 0.00 0.00 39.65 3.71
1997 2118 2.045536 GCCAGCAGGGTTGAGAGG 60.046 66.667 0.00 0.00 39.65 3.69
1998 2119 2.045536 GGCCAGCAGGGTTGAGAG 60.046 66.667 0.00 0.00 39.65 3.20
1999 2120 4.020617 CGGCCAGCAGGGTTGAGA 62.021 66.667 2.24 0.00 39.65 3.27
2002 2123 4.974721 AACCGGCCAGCAGGGTTG 62.975 66.667 13.47 0.00 42.23 3.77
2003 2124 4.218686 AAACCGGCCAGCAGGGTT 62.219 61.111 13.47 10.05 45.58 4.11
2004 2125 4.660938 GAAACCGGCCAGCAGGGT 62.661 66.667 13.47 3.30 39.65 4.34
2013 2134 4.114997 CATGCACCCGAAACCGGC 62.115 66.667 0.00 0.00 45.48 6.13
2014 2135 4.114997 GCATGCACCCGAAACCGG 62.115 66.667 14.21 0.00 46.35 5.28
2015 2136 2.141122 AAAGCATGCACCCGAAACCG 62.141 55.000 21.98 0.00 0.00 4.44
2016 2137 0.667184 CAAAGCATGCACCCGAAACC 60.667 55.000 21.98 0.00 0.00 3.27
2017 2138 0.031994 ACAAAGCATGCACCCGAAAC 59.968 50.000 21.98 0.00 0.00 2.78
2018 2139 1.610363 TACAAAGCATGCACCCGAAA 58.390 45.000 21.98 0.00 0.00 3.46
2019 2140 1.832883 ATACAAAGCATGCACCCGAA 58.167 45.000 21.98 0.42 0.00 4.30
2020 2141 1.742831 GAATACAAAGCATGCACCCGA 59.257 47.619 21.98 1.93 0.00 5.14
2021 2142 1.745087 AGAATACAAAGCATGCACCCG 59.255 47.619 21.98 7.67 0.00 5.28
2022 2143 2.099756 GGAGAATACAAAGCATGCACCC 59.900 50.000 21.98 1.68 0.00 4.61
2023 2144 2.099756 GGGAGAATACAAAGCATGCACC 59.900 50.000 21.98 6.69 0.00 5.01
2024 2145 3.019564 AGGGAGAATACAAAGCATGCAC 58.980 45.455 21.98 0.67 0.00 4.57
2025 2146 3.018856 CAGGGAGAATACAAAGCATGCA 58.981 45.455 21.98 0.00 0.00 3.96
2026 2147 3.019564 ACAGGGAGAATACAAAGCATGC 58.980 45.455 10.51 10.51 0.00 4.06
2027 2148 5.047802 ACAAACAGGGAGAATACAAAGCATG 60.048 40.000 0.00 0.00 0.00 4.06
2028 2149 5.047802 CACAAACAGGGAGAATACAAAGCAT 60.048 40.000 0.00 0.00 0.00 3.79
2029 2150 4.278170 CACAAACAGGGAGAATACAAAGCA 59.722 41.667 0.00 0.00 0.00 3.91
2030 2151 4.518970 TCACAAACAGGGAGAATACAAAGC 59.481 41.667 0.00 0.00 0.00 3.51
2031 2152 6.824305 ATCACAAACAGGGAGAATACAAAG 57.176 37.500 0.00 0.00 29.38 2.77
2032 2153 8.698973 TTAATCACAAACAGGGAGAATACAAA 57.301 30.769 0.00 0.00 29.38 2.83
2033 2154 8.739039 CATTAATCACAAACAGGGAGAATACAA 58.261 33.333 0.00 0.00 29.38 2.41
2034 2155 8.106462 TCATTAATCACAAACAGGGAGAATACA 58.894 33.333 0.00 0.00 29.38 2.29
2035 2156 8.506168 TCATTAATCACAAACAGGGAGAATAC 57.494 34.615 0.00 0.00 29.38 1.89
2037 2158 9.125026 GTATCATTAATCACAAACAGGGAGAAT 57.875 33.333 0.00 0.00 29.38 2.40
2038 2159 8.106462 TGTATCATTAATCACAAACAGGGAGAA 58.894 33.333 0.00 0.00 29.38 2.87
2039 2160 7.552687 GTGTATCATTAATCACAAACAGGGAGA 59.447 37.037 1.26 0.00 29.38 3.71
2040 2161 7.465916 CGTGTATCATTAATCACAAACAGGGAG 60.466 40.741 6.01 0.00 29.38 4.30
2041 2162 6.315144 CGTGTATCATTAATCACAAACAGGGA 59.685 38.462 6.01 0.00 0.00 4.20
2042 2163 6.093495 ACGTGTATCATTAATCACAAACAGGG 59.907 38.462 0.00 0.00 0.00 4.45
2043 2164 7.072177 ACGTGTATCATTAATCACAAACAGG 57.928 36.000 0.00 5.48 0.00 4.00
2044 2165 9.472995 GTAACGTGTATCATTAATCACAAACAG 57.527 33.333 0.00 0.00 0.00 3.16
2045 2166 9.210329 AGTAACGTGTATCATTAATCACAAACA 57.790 29.630 0.00 0.00 0.00 2.83
2076 2197 0.035820 TATCGCGAGTGGCCCTTTTT 60.036 50.000 16.66 0.00 38.94 1.94
2077 2198 0.462047 CTATCGCGAGTGGCCCTTTT 60.462 55.000 16.66 0.00 38.94 2.27
2078 2199 1.144057 CTATCGCGAGTGGCCCTTT 59.856 57.895 16.66 0.00 38.94 3.11
2079 2200 2.058595 ACTATCGCGAGTGGCCCTT 61.059 57.895 16.66 0.00 38.94 3.95
2080 2201 2.442272 ACTATCGCGAGTGGCCCT 60.442 61.111 16.66 0.00 38.94 5.19
2081 2202 2.279517 CACTATCGCGAGTGGCCC 60.280 66.667 16.66 0.00 42.68 5.80
2082 2203 0.459585 TTTCACTATCGCGAGTGGCC 60.460 55.000 23.30 0.00 45.79 5.36
2083 2204 0.645868 GTTTCACTATCGCGAGTGGC 59.354 55.000 23.30 13.05 45.79 5.01
2084 2205 1.920574 CAGTTTCACTATCGCGAGTGG 59.079 52.381 23.30 14.43 45.79 4.00
2085 2206 2.596452 ACAGTTTCACTATCGCGAGTG 58.404 47.619 19.30 19.30 46.90 3.51
2086 2207 4.430137 TTACAGTTTCACTATCGCGAGT 57.570 40.909 16.66 4.80 0.00 4.18
2087 2208 5.515270 TCAATTACAGTTTCACTATCGCGAG 59.485 40.000 16.66 4.02 0.00 5.03
2088 2209 5.404096 TCAATTACAGTTTCACTATCGCGA 58.596 37.500 13.09 13.09 0.00 5.87
2089 2210 5.696260 TCAATTACAGTTTCACTATCGCG 57.304 39.130 0.00 0.00 0.00 5.87
2090 2211 7.005062 ACATCAATTACAGTTTCACTATCGC 57.995 36.000 0.00 0.00 0.00 4.58
2095 2216 9.448438 TGCTTATACATCAATTACAGTTTCACT 57.552 29.630 0.00 0.00 0.00 3.41
2096 2217 9.490663 GTGCTTATACATCAATTACAGTTTCAC 57.509 33.333 0.00 0.00 0.00 3.18
2097 2218 9.225436 TGTGCTTATACATCAATTACAGTTTCA 57.775 29.630 0.00 0.00 0.00 2.69
2100 2221 9.840427 GTTTGTGCTTATACATCAATTACAGTT 57.160 29.630 0.00 0.00 0.00 3.16
2101 2222 9.008965 TGTTTGTGCTTATACATCAATTACAGT 57.991 29.630 0.00 0.00 0.00 3.55
2102 2223 9.277565 GTGTTTGTGCTTATACATCAATTACAG 57.722 33.333 0.00 0.00 0.00 2.74
2103 2224 7.960195 CGTGTTTGTGCTTATACATCAATTACA 59.040 33.333 0.00 0.00 0.00 2.41
2104 2225 7.044966 GCGTGTTTGTGCTTATACATCAATTAC 60.045 37.037 0.00 0.00 0.00 1.89
2105 2226 6.964370 GCGTGTTTGTGCTTATACATCAATTA 59.036 34.615 0.00 0.00 0.00 1.40
2106 2227 5.799936 GCGTGTTTGTGCTTATACATCAATT 59.200 36.000 0.00 0.00 0.00 2.32
2107 2228 5.123820 AGCGTGTTTGTGCTTATACATCAAT 59.876 36.000 0.00 0.00 38.57 2.57
2108 2229 4.454161 AGCGTGTTTGTGCTTATACATCAA 59.546 37.500 0.00 0.00 38.57 2.57
2109 2230 4.000325 AGCGTGTTTGTGCTTATACATCA 59.000 39.130 0.00 0.00 38.57 3.07
2110 2231 4.334443 CAGCGTGTTTGTGCTTATACATC 58.666 43.478 0.00 0.00 40.03 3.06
2111 2232 3.426159 GCAGCGTGTTTGTGCTTATACAT 60.426 43.478 0.00 0.00 40.03 2.29
2112 2233 2.095969 GCAGCGTGTTTGTGCTTATACA 60.096 45.455 0.00 0.00 40.03 2.29
2113 2234 2.505866 GCAGCGTGTTTGTGCTTATAC 58.494 47.619 0.00 0.00 40.03 1.47
2114 2235 1.466950 GGCAGCGTGTTTGTGCTTATA 59.533 47.619 0.00 0.00 40.03 0.98
2115 2236 0.240945 GGCAGCGTGTTTGTGCTTAT 59.759 50.000 0.00 0.00 40.03 1.73
2116 2237 1.652012 GGCAGCGTGTTTGTGCTTA 59.348 52.632 0.00 0.00 40.03 3.09
2117 2238 2.412937 GGCAGCGTGTTTGTGCTT 59.587 55.556 0.00 0.00 40.03 3.91
2118 2239 3.952675 CGGCAGCGTGTTTGTGCT 61.953 61.111 0.00 0.00 43.58 4.40
2119 2240 2.764251 CTACGGCAGCGTGTTTGTGC 62.764 60.000 0.00 0.00 36.42 4.57
2120 2241 1.204062 CTACGGCAGCGTGTTTGTG 59.796 57.895 0.00 0.00 0.00 3.33
2121 2242 1.227438 ACTACGGCAGCGTGTTTGT 60.227 52.632 0.00 0.00 0.00 2.83
2122 2243 1.204062 CACTACGGCAGCGTGTTTG 59.796 57.895 0.00 0.00 0.00 2.93
2123 2244 1.959226 CCACTACGGCAGCGTGTTT 60.959 57.895 0.00 0.00 0.00 2.83
2124 2245 2.357034 CCACTACGGCAGCGTGTT 60.357 61.111 0.00 0.00 0.00 3.32
2133 2254 4.861210 TGTTTAAAAATGTGCCACTACGG 58.139 39.130 0.00 0.00 38.11 4.02
2134 2255 5.753744 TCTGTTTAAAAATGTGCCACTACG 58.246 37.500 0.00 0.00 0.00 3.51
2135 2256 7.489757 TGTTTCTGTTTAAAAATGTGCCACTAC 59.510 33.333 0.00 0.00 0.00 2.73
2136 2257 7.548097 TGTTTCTGTTTAAAAATGTGCCACTA 58.452 30.769 0.00 0.00 0.00 2.74
2137 2258 6.402222 TGTTTCTGTTTAAAAATGTGCCACT 58.598 32.000 0.00 0.00 0.00 4.00
2138 2259 6.654793 TGTTTCTGTTTAAAAATGTGCCAC 57.345 33.333 0.00 0.00 0.00 5.01
2139 2260 7.672983 TTTGTTTCTGTTTAAAAATGTGCCA 57.327 28.000 0.00 0.00 0.00 4.92
2140 2261 8.447053 TCTTTTGTTTCTGTTTAAAAATGTGCC 58.553 29.630 0.00 0.00 0.00 5.01
2141 2262 9.986833 ATCTTTTGTTTCTGTTTAAAAATGTGC 57.013 25.926 0.00 0.00 0.00 4.57
2144 2265 9.848172 CGGATCTTTTGTTTCTGTTTAAAAATG 57.152 29.630 0.00 0.00 0.00 2.32
2145 2266 8.547894 GCGGATCTTTTGTTTCTGTTTAAAAAT 58.452 29.630 0.00 0.00 0.00 1.82
2146 2267 7.010645 GGCGGATCTTTTGTTTCTGTTTAAAAA 59.989 33.333 0.00 0.00 0.00 1.94
2147 2268 6.477360 GGCGGATCTTTTGTTTCTGTTTAAAA 59.523 34.615 0.00 0.00 0.00 1.52
2148 2269 5.980715 GGCGGATCTTTTGTTTCTGTTTAAA 59.019 36.000 0.00 0.00 0.00 1.52
2149 2270 5.300792 AGGCGGATCTTTTGTTTCTGTTTAA 59.699 36.000 0.00 0.00 0.00 1.52
2150 2271 4.825085 AGGCGGATCTTTTGTTTCTGTTTA 59.175 37.500 0.00 0.00 0.00 2.01
2151 2272 3.636764 AGGCGGATCTTTTGTTTCTGTTT 59.363 39.130 0.00 0.00 0.00 2.83
2152 2273 3.222603 AGGCGGATCTTTTGTTTCTGTT 58.777 40.909 0.00 0.00 0.00 3.16
2153 2274 2.814336 GAGGCGGATCTTTTGTTTCTGT 59.186 45.455 0.00 0.00 0.00 3.41
2154 2275 2.813754 TGAGGCGGATCTTTTGTTTCTG 59.186 45.455 0.00 0.00 0.00 3.02
2155 2276 3.140325 TGAGGCGGATCTTTTGTTTCT 57.860 42.857 0.00 0.00 0.00 2.52
2156 2277 3.181496 GGATGAGGCGGATCTTTTGTTTC 60.181 47.826 0.00 0.00 0.00 2.78
2157 2278 2.755103 GGATGAGGCGGATCTTTTGTTT 59.245 45.455 0.00 0.00 0.00 2.83
2158 2279 2.290896 TGGATGAGGCGGATCTTTTGTT 60.291 45.455 0.00 0.00 0.00 2.83
2159 2280 1.281867 TGGATGAGGCGGATCTTTTGT 59.718 47.619 0.00 0.00 0.00 2.83
2160 2281 2.042686 TGGATGAGGCGGATCTTTTG 57.957 50.000 0.00 0.00 0.00 2.44
2161 2282 3.303351 AATGGATGAGGCGGATCTTTT 57.697 42.857 0.00 0.00 0.00 2.27
2162 2283 4.437682 TTAATGGATGAGGCGGATCTTT 57.562 40.909 0.00 0.00 0.00 2.52
2163 2284 4.647564 ATTAATGGATGAGGCGGATCTT 57.352 40.909 0.00 0.00 0.00 2.40
2164 2285 4.647564 AATTAATGGATGAGGCGGATCT 57.352 40.909 0.00 0.00 0.00 2.75
2165 2286 5.163713 GCTTAATTAATGGATGAGGCGGATC 60.164 44.000 0.00 0.00 0.00 3.36
2166 2287 4.702131 GCTTAATTAATGGATGAGGCGGAT 59.298 41.667 0.00 0.00 0.00 4.18
2167 2288 4.072131 GCTTAATTAATGGATGAGGCGGA 58.928 43.478 0.00 0.00 0.00 5.54
2168 2289 3.820467 TGCTTAATTAATGGATGAGGCGG 59.180 43.478 0.00 0.00 0.00 6.13
2169 2290 4.756642 TCTGCTTAATTAATGGATGAGGCG 59.243 41.667 0.00 0.00 0.00 5.52
2170 2291 6.639632 TTCTGCTTAATTAATGGATGAGGC 57.360 37.500 0.00 0.00 0.00 4.70
2171 2292 8.906867 TCTTTTCTGCTTAATTAATGGATGAGG 58.093 33.333 0.00 0.00 0.00 3.86
2181 2302 9.528489 ACTGGGTAATTCTTTTCTGCTTAATTA 57.472 29.630 0.00 0.00 0.00 1.40
2182 2303 8.422577 ACTGGGTAATTCTTTTCTGCTTAATT 57.577 30.769 0.00 0.00 0.00 1.40
2183 2304 8.422577 AACTGGGTAATTCTTTTCTGCTTAAT 57.577 30.769 0.00 0.00 0.00 1.40
2184 2305 7.833285 AACTGGGTAATTCTTTTCTGCTTAA 57.167 32.000 0.00 0.00 0.00 1.85
2185 2306 8.927675 TTAACTGGGTAATTCTTTTCTGCTTA 57.072 30.769 0.00 0.00 0.00 3.09
2186 2307 7.833285 TTAACTGGGTAATTCTTTTCTGCTT 57.167 32.000 0.00 0.00 0.00 3.91
2187 2308 8.422577 AATTAACTGGGTAATTCTTTTCTGCT 57.577 30.769 0.00 0.00 29.51 4.24
2199 2320 9.442047 CCAATTTTGCATTAATTAACTGGGTAA 57.558 29.630 0.00 0.00 0.00 2.85
2200 2321 8.598041 ACCAATTTTGCATTAATTAACTGGGTA 58.402 29.630 0.00 0.00 0.00 3.69
2201 2322 7.457561 ACCAATTTTGCATTAATTAACTGGGT 58.542 30.769 0.00 7.20 0.00 4.51
2202 2323 7.920160 ACCAATTTTGCATTAATTAACTGGG 57.080 32.000 0.00 6.73 0.00 4.45
2203 2324 8.997323 TCAACCAATTTTGCATTAATTAACTGG 58.003 29.630 0.00 7.57 0.00 4.00
2210 2331 9.194271 GCAATTTTCAACCAATTTTGCATTAAT 57.806 25.926 0.00 0.00 0.00 1.40
2211 2332 8.411683 AGCAATTTTCAACCAATTTTGCATTAA 58.588 25.926 8.05 0.00 0.00 1.40
2212 2333 7.938715 AGCAATTTTCAACCAATTTTGCATTA 58.061 26.923 8.05 0.00 0.00 1.90
2213 2334 6.807789 AGCAATTTTCAACCAATTTTGCATT 58.192 28.000 8.05 0.00 0.00 3.56
2214 2335 6.394025 AGCAATTTTCAACCAATTTTGCAT 57.606 29.167 8.05 0.00 0.00 3.96
2215 2336 5.831702 AGCAATTTTCAACCAATTTTGCA 57.168 30.435 8.05 0.00 0.00 4.08
2219 2340 9.097257 CGGATTATAGCAATTTTCAACCAATTT 57.903 29.630 0.00 0.00 0.00 1.82
2220 2341 7.224557 GCGGATTATAGCAATTTTCAACCAATT 59.775 33.333 0.00 0.00 0.00 2.32
2221 2342 6.701400 GCGGATTATAGCAATTTTCAACCAAT 59.299 34.615 0.00 0.00 0.00 3.16
2222 2343 6.039616 GCGGATTATAGCAATTTTCAACCAA 58.960 36.000 0.00 0.00 0.00 3.67
2223 2344 5.359576 AGCGGATTATAGCAATTTTCAACCA 59.640 36.000 0.00 0.00 35.48 3.67
2224 2345 5.687285 CAGCGGATTATAGCAATTTTCAACC 59.313 40.000 0.00 0.00 35.48 3.77
2225 2346 6.494842 TCAGCGGATTATAGCAATTTTCAAC 58.505 36.000 0.00 0.00 35.48 3.18
2226 2347 6.691754 TCAGCGGATTATAGCAATTTTCAA 57.308 33.333 0.00 0.00 35.48 2.69
2227 2348 5.277974 GCTCAGCGGATTATAGCAATTTTCA 60.278 40.000 0.00 0.00 35.48 2.69
2228 2349 5.149977 GCTCAGCGGATTATAGCAATTTTC 58.850 41.667 0.00 0.00 35.48 2.29
2229 2350 4.580167 TGCTCAGCGGATTATAGCAATTTT 59.420 37.500 0.00 0.00 40.05 1.82
2230 2351 4.136796 TGCTCAGCGGATTATAGCAATTT 58.863 39.130 0.00 0.00 40.05 1.82
2231 2352 3.743521 TGCTCAGCGGATTATAGCAATT 58.256 40.909 0.00 0.00 40.05 2.32
2232 2353 3.332919 CTGCTCAGCGGATTATAGCAAT 58.667 45.455 0.00 0.00 42.21 3.56
2233 2354 2.759191 CTGCTCAGCGGATTATAGCAA 58.241 47.619 0.00 0.00 42.21 3.91
2234 2355 1.606480 GCTGCTCAGCGGATTATAGCA 60.606 52.381 10.62 0.00 45.29 3.49
2235 2356 1.074752 GCTGCTCAGCGGATTATAGC 58.925 55.000 10.62 0.00 45.29 2.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.