>input_sequence_85680
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-------------------------------------ATGAATGCTGCGGCAAGTCTAGAACCGAGAGCGAAGGCCACCC
TGGTTCTCAGAGGGGAATCGTTCACAGTCAGCTCTGAGTCAGGTACCCTGTCGGAGCAGCTGGCGGC-GATGCGGGAGAA
GAGCATGGTGATCCTCAAGGGCTACATAACCAAGCACAACGCTCCGAACGATGTCCCTGATGAATCCATCGAGGGCTCAT
CCGATGAGGAGGGCGAAGCGCTTGCTAAAAATCCTCTGAAGAAATCTAGGAAGCAGAG------------GTGA------
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>chr7B_1_TraesCS7B01G451100
GGATACACGGCAGATAATCAATAAAAGTTTTCATTAAAAAAACGTTTTGCCCTTTTTTAGTTTTTTTTTAGATCTTACTA
ACCTTTTTTTTGTGTGTGTGTGGGTCGAAAGTGAGTCCACACGGATGGAGATTGTATCAAGCCCACTTTGCTTTCCAGGC
TTCCAGCCCACGCC-GGCGCGGCCCAGGCTGACTGCTTCTCCTA--------CCTCACCCCTTCCTTACCTCTACAGCGG
TGCTAACCTAACAACGCACGACAAAGACAGCCGCCGGCCGTCGAAGCGCGCGCCGCCGTACACCCTCTCTCTCCG-----
-----------GCCGCCTCGCCGTCCCCCGCGGATAAGGTCTCACCCAACCTCTCCTACTTTCTACTCCCCCCTGTATCC
GTTGCTTGCGGCATCGCTGCACCCGTAGGTAGGGTCTGTCTGATGGGGGCTGTGTCCGTTGGATCCATGTTAAAAATTGG
TCTGGAGAGCCCCAAAATCCAGTAGCCATGAGCCGCGCCCTACGATTTTGGATTATTTTTTCTCCCTATTTTGTGCCCGC
TTCTGTACGCAAGCGTTTCCGAGCTATGGGCGAAGGATTTGGG-------TGCAGTGTGTCA-----GGAGCCGGCCGCA
GTTGTTACAGTATCAACACCTGGATTACAATCA-------TAGTCCACTCCGGTGGTTTGTTTCAGCCTGAATTCGTCTT
AGATTGATTCACCGC-AAGGTGCGGCGATCTTCTGCTCATGCAGAGCCGGTTAGCTTCAGAACTGCCTCAATTTGATATC
AGTATTTCGCTCCAGTTAACTGTTTCAGTCTGAATCTATCTTAGGTTGCCTTACCA------------------------
---ACAGGGCTGGTTAGTTTGCAGAACTGCCGCTAGCATATAGCATTACCATTTTGCTTTGCACCGCTGAAGAGTTCTGC
AAC----AATTCATATTGTTGAATGCGCGG-TACAAATGAATTTTTAGATTTCCCAACGGCTTCGTCATTTCTGCTCTGA
ATTTTCTTGTCAGGTTCAGCTGCGGACGATGGACCAGATGAATGCTGCGGCAAGTCTAGAACCGAGAGCGAAGGCCACCC
TGGTTCTCAGAGGGGAATCGTTCACAGTCAGCTCTGAGTCAGGTACCCTGTCGGAGCAGCTGGCGGC-GATGCGGGAGAA
GAGCATGGTGATCCTCAAGGGCTACATAACCAAGCACAACGCTCCGAACGATGTCCCTGATGAATCCATCGAGGGCTCAT
CCGATGAGGAGGGCGAAGCGCTTGCTAAAAATCCTCTGAAGAAATCTAGGAAGCAGAG------------GTGATCGTCC
TAAATCTCATCCGATGTATCGCGCTCTTTGTTAGTCCCCTCATTCAAGTATCAGAGAACATGCTGTTGTCCCTTGCTAGC
TAA---------------------------TGTTAGGCACTAGCTGCTTGTTTATGGAATTGTTATCTGAAGATATGTGC
AGGGGAAGGTCGCACTTTTCTGTACAACTCGTCTGTCAGATGTTTTGCTTTGGAGGAGAATATATGAGCTTCAGCACAAA
AGTTATTTGCTGTTAAATGTCCATCTTCAGTAAGGCGCCAACAACTTAATTGAAATCCAACAAGCAGCAGGTCCTGATAG
CAGTCAAAATTTCTGTTTCATGAAAAGTATATTGTGTTCTAGTGTATTATCTGTACACATGCATCCAACTGTGGGGGT-A
AAAAT-GATTCTAGCACACTCCATCAACCATGTTTTTTAGTTTCCTTATCCGTAAAAACTAGTGTT-AAAACTATGTTTC
CAAGCCCTATCAAATTTGTGGAAACTTTTATCTTGTGGTTGGTTCACATATCTTACTCAGCATAGTACCGATCTCTAGCT
GAACATGTTGAAAACCCTGACGTCTCTAGCTGAACATGTTGAAAACCCTGATGGCCTATTGTGCCATGTGGTATCTCTAG
CTTAACATCGGTAACAAACACTATTCTGTCTGAACAGAATACAGAAACTCCGACAACATGAACTCAATTTGGGATTGGAA
GCAACACACTAGCACATGTCACTCGATACACGTGTTTCCTCTCAACCCTGCTGGCCGGTTTCGGGTGCATGCTTTGTATT
CTCCCTGTTTGTGATTAATGATACACGTTACTTAAAAAAAAGGGCCACTCGCGATAGTGAAACTGTAATTGATGTATAAG
CACAAACACGCTGCCGTAGTGGCACATTTTTAAACAGAAACAAAAGATCCGCCTCATCCATTAATTAAGCAGAAAAGAAT
TACCCAGTTAATTAATGCAAAATTGGTTGAAAATTGCTATAATCCGCTGAGCAGCATGCATAGG
>chr7D_161
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TTCTAGCCCACGTCAGGCGCGGCCCAGGCTGGCTGCTTCTCCAGTTCTCCACCCTCTCCCCTTCCTTGCCTCTAGAGCGG
TGCTAACCTAACCCCCGGC----AAGACAGCCGCCGGCCGTGGAAGCGCGCGCCGCCGTACAC--TCTCTCTCCCCGGTC
AAGACGCGCACGCCTCCTCGCCGTCCCCCGCGGATAAGGTCTCACTCAACCCCTCATACTTTCTACT-CCCCCTGTATCC
GTTGCTTGCGGCATCGCTGCATCCGTAG----GGTCTGTCTGATGTGGGCTGTGTCCGTTGGATCCATGT--AAAACTGG
TCTGGAGAACCGCAAAATCCAGTAGCCATGAGCCGCGCCATACGATTTTGGATTATTTTTTCTCCCTATTTTGTGCCCGC
TTCTGTACGCAAGCGTTTCCGAGCTATGGACAAAGGATTTGGG-------TGCAGTGTATCGTGCTGGGAGCCAGCCGCA
GTTGTTACAGTATCAACACCTGGATTACAATCCCTGTTAGTAGTCCACTCCGGTGGTTTGTTACAGCCTGAATTCGTCTT
AGATTACGTCGCTG-AAAGGCGCGGCGATCTTCTGCTGCTGCATTGCCGATTAGTTTCAGAACTGCCTCTGATTGCTATC
AGTATTTCGCTTCAGTTATCTATTTTAGTCTGAATCGTGCTTAGGTGGCCTCCCCTATAAGGCGGGGCGATTGACCTTAT
GCCACATAGCTGGTTAGTTTTCAGAATTTCCACTAGC--ATAGCATTAGCATTTTGCTTTGCACTGCTGAAGAGTTTTCC
TACAAATGATTCATTTTGTTGAATTGCATGTTACAAAAAAATTTGTAGGTTTCCCATCGGCTTCGTCATTTCTGCTTTGA
ATTTTCTTGTCAGGTTCAGCTGTGGACGATGGGCCAGATGAATGCTA--------CTACAACCGAGGGCGAAGGCCACCC
TGGTTCTTGGAGGGGAGTCGTTCGCAGTCAGCTCTGAGTTAGGTGCCCTGTCGGAGCAGCTGGCGGC-AATGAGGGAGAA
GAGCATGGTGATCCTCAAGGACTACATCACCAAGCACAACGCTCCAAATGATGTCCCTGATGAATCCATCGAGGGCTGAT
CCGATGAGGAGGGCGAAGTGCTTGCTTAAAACACGGTGAAGAAATCTAAGAAGCAGAAGAAGAAGCAGAAGCGATCGTCC
TAAATCTCATCTCATTTATCGTGCTCTTTCTTAGTCCCTTCTTGCAAAGAATAGAAAACATGCTGCTGGACACAAG----
---------------AAAAGATCAAATTGTTGTTAGGCACTAGCTGCTTGTTTATGGAATTGTTGTCTGTAGATATGTGC
AGGGGAACGTCACACTTTTTTGTACAGCTTGTCTGTCATATGTTTTGCTTTGGAGGAGAATATGTGAGCTTCAGCACAAA
AGTTCTTTGCTGTTAAATGTCCATCTTCAGTAAGGCGCCAACAACTTAATTGAAATCCAACAACCAGCAGGTCCTGATAG
CAGTCAAATTTTCTGTTTCATGAAAAGTATATCGTGTTCTAGTGTAATTTCTGTACACACGCATCAAACTGTGGTGTAAA
AAAAT-GCTTCCAGCACACTCCATCAACCATGTTTTTTAG----------------AAATAGTGTT-AAAACTATGTTTC
CAAGCCCTATCAAAATTCTGGAAGCTTCTCCCTTGTGGCTGGTTCACATATCTTACTCAGCATAGTACCGATCTCTAGCT
T-ACATGTTGAAAAGCCTGACG----------------------------------------------------------
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>chr7A_161
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TTCCAGCCCACGTCAGGCGCGGCCCAGGCTGGCTGCTT------------------TCCTCTTCCTTACCTCTACAGTGG
TGCTAACCTAACGCCCGGC----AAGACAGCCGCCGGCCGTCGAAACGCACGCCGCCGCACGCC--CTCTCTCTCCGGTC
AAGACGCGCACGCCGCACCGCCGTCCCCCGTTGATAAGGTCTCACTCAACCTCTCCTACTTTCTAC-CCCCCCTGTGTCC
GTTGCTTGCGGCATCGCTGCACCCGTAG----GGTCTGTCTGATGGGGGCTGTGTCCGTTCGGTCCATGT--AA-ATTAG
TCTGAAGAACAGCAAAATCCATTAAACATGA-------------------------------------------GCCCGC
TTCTGGACGCAAGCGTATCTGAGCTATGAACAAAGGATTTGGGTGCAGTCTGCAGTGTGTCGTGTTGGGAGCCGGCCGCA
GTTGTTACAGTATCAACACCTGGATTACAATCCCTGTTAGTAGTCCACTCCGGTGGTTTGTTTCAGCCTGAATTCGTCTT
AGATTGATTCGCCACAAGGGTGCGGCGATCTTCTGCTGATGCAGAGCCGATTAGTTTCAGAACTGCCTCAGTTCGACATC
AGTATTTCGCTCCTGTTATCTGCTTCAGTCTGAATCTATCTTAGGTTGCCTTGCCA------------------------
---ACAGGGCTGGTTTGTTTTCAGAGCTGCCACTAGC--ATAGCATTAGCATTTTGTTTTGTACCGCTGAAGAGTTTTGC
TAC----GATTCATATTGTTGAGTGGGCTA-TACATATGAATTTGTTGATTTCCCATTGGTTTCGTCATTTGAGCTTTGA
ATTTTCTTGTCAGGTTCAGCTGTGGATGACGGACCAGATGAATGCTGCGGCAAGTCTTAATCCAAGAGCGAGAGCCACCC
TGGTTCTCGCTGGGGAATCGTTCACAGTCAGCTCCGAGTCCGGTACCCTGTCGGAGCAGCTGGCGGCAAATGAGGGAGAG
GAGCATGGTGATACTCAAGGAGTACATTACCAAGCACAACGCTCCGAACGATGTCCCTGATGAATCCATCGAGGGCTCAT
CTGATGAGGAGGGTGAAGCACTTGCCAAAACCCCGCCAAAGAAATCTAAGAAG---------------AAGTGATCGTCC
TAAATCTCATCATATTTATCGTGCTCTTTCTTAGTCTCCTCTTGCAAAGATCAGAGAACATGCTGTCATCACTTGCTACT
ATTGCCCTGACACGAAAAAGATCAAGTTATCGTTAGGCACTAACTGCTTGTTTATGGAATTGTTATCTGAAGCTATGTGC
AGGGGTAGTTTGCACCTTTCTGTACAAATCGTCTGTTAGATGTTTTGCTTTGGAGGGGAATATACGAGCTTCAGCACAAA
AGTTCTTTGCTGTTAAATGTCCATGTTCAGTAAGGTGCCAACAACTCAATTGAAATCCAACAAG----------------
------------CTGTTTCATGAAAAGTATATCGTGTTATAGTGTATTTTCTGTACACATGCATCAAACTGTGGGTTAAA
AAAAAAGCTTCCGGCACACTCAATCAACCATGTTTTTTAGTTTCCTTGACAGTAAAAAATAGTGTTAAAAACTATGTTTC
CAAGCCCTGTCAAAATTCCTGAAGCTTCTCCCTTGTGTCTGGTTCACATATCTTCCTCAGCATAGTACCGCTCTCTCGCT
CAACGTGCTGAAAACGCCTGACG---------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
------------S------------------S----------SS------------S-----------------------
------------SS-SSS-SSSS-----------------------------------------S---------S-----
---------------------------------------------S----------------------------------
----------------------------SSSS--------------------------------------SS--------
--------S--S---------------------------S----------------------------------------
-----------------------------S-S-----------------------------S------------------
--------------------------------S-----------------------------------------------
----------S--------------------------S-----------S----S---------------S---------
------------------S---------------------------------S---------------------------
--------------------S----------S-----SS---------S---------------------------S---
S------S-----------------S--S---------------S-----------S-------------------S---
----------------------S-----------------------------------S---------------------
--------S-----------------------------------------------------------S---S-------
--------------------S------S----------------------------------------------------
-------------------------------S--S-------------S--------S----------------------
-----------SS--S-----S-------S-----------S-S---SS-----------------------------SS
SSS-----------------------------------------------------------------------------
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----S---------------------------------------------------------------------------
--------S-----------------------S---------------S----------------S----------SS--
-------S---S-----------------------------------SS-S-------S---------------------
--------------S--S-----S---S-SS-------S-----------------------------------------
S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_124
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------------------------TCGAAAGTGAGTCCACACGG------------------------------------
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>reverse_2138
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---------------------------------------------------------GTTTCGGGTGCATGCTTTGT---
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