Multiple sequence alignment - TraesCS7B01G362500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G362500 chr7B 100.000 2591 0 0 1 2591 624245336 624247926 0.000000e+00 4785.0
1 TraesCS7B01G362500 chr7B 85.926 135 16 2 1509 1643 624791115 624791246 9.670000e-30 141.0
2 TraesCS7B01G362500 chr7B 91.549 71 6 0 2521 2591 547274622 547274692 5.900000e-17 99.0
3 TraesCS7B01G362500 chr7B 76.744 172 28 8 2420 2591 700555205 700555364 4.590000e-13 86.1
4 TraesCS7B01G362500 chr7D 93.948 1702 56 19 1 1666 568418778 568420468 0.000000e+00 2529.0
5 TraesCS7B01G362500 chr7D 83.897 621 64 21 997 1587 7466117 7465503 6.260000e-156 560.0
6 TraesCS7B01G362500 chr7D 81.166 446 46 21 1153 1574 7458511 7458080 8.940000e-85 324.0
7 TraesCS7B01G362500 chr7D 92.195 205 13 1 2144 2345 568420463 568420667 1.170000e-73 287.0
8 TraesCS7B01G362500 chr7D 90.426 94 8 1 1102 1195 9304865 9304773 3.500000e-24 122.0
9 TraesCS7B01G362500 chr7D 94.872 78 4 0 1111 1188 10507705 10507782 3.500000e-24 122.0
10 TraesCS7B01G362500 chr7A 90.983 1730 81 35 1 1667 657154038 657155755 0.000000e+00 2261.0
11 TraesCS7B01G362500 chr7A 98.929 467 3 2 1666 2131 47788998 47789463 0.000000e+00 833.0
12 TraesCS7B01G362500 chr7A 89.234 418 36 4 1079 1490 8404223 8403809 4.940000e-142 514.0
13 TraesCS7B01G362500 chr7A 89.234 418 36 4 1079 1490 8411035 8410621 4.940000e-142 514.0
14 TraesCS7B01G362500 chr7A 81.148 244 37 5 1405 1643 657424521 657424760 1.220000e-43 187.0
15 TraesCS7B01G362500 chr7A 89.286 56 4 2 1534 1587 8403746 8403691 4.630000e-08 69.4
16 TraesCS7B01G362500 chr7A 89.286 56 4 2 1534 1587 8410558 8410503 4.630000e-08 69.4
17 TraesCS7B01G362500 chr6B 98.718 468 6 0 1666 2133 18757671 18757204 0.000000e+00 832.0
18 TraesCS7B01G362500 chr6B 98.504 468 5 2 1666 2132 65135543 65136009 0.000000e+00 824.0
19 TraesCS7B01G362500 chr1A 98.927 466 3 2 1667 2131 82076871 82077335 0.000000e+00 832.0
20 TraesCS7B01G362500 chr1A 98.520 473 4 3 1660 2131 583298971 583298501 0.000000e+00 832.0
21 TraesCS7B01G362500 chr5A 98.707 464 4 2 1669 2131 554876305 554876767 0.000000e+00 822.0
22 TraesCS7B01G362500 chr4A 98.294 469 6 2 1666 2133 617685100 617684633 0.000000e+00 821.0
23 TraesCS7B01G362500 chr4A 83.845 619 62 21 997 1584 732789406 732788795 2.910000e-154 555.0
24 TraesCS7B01G362500 chr4A 79.651 172 23 6 2420 2591 698791292 698791451 2.110000e-21 113.0
25 TraesCS7B01G362500 chr3B 98.498 466 5 2 1667 2131 472878261 472877797 0.000000e+00 821.0
26 TraesCS7B01G362500 chr3B 78.680 197 24 13 2398 2591 396732394 396732213 5.860000e-22 115.0
27 TraesCS7B01G362500 chr3A 98.498 466 6 1 1666 2131 698298873 698298409 0.000000e+00 821.0
28 TraesCS7B01G362500 chr5D 84.016 244 38 1 2348 2591 431249737 431249979 1.550000e-57 233.0
29 TraesCS7B01G362500 chr5D 84.967 153 23 0 2342 2494 278469107 278469259 3.450000e-34 156.0
30 TraesCS7B01G362500 chr6A 76.471 238 42 10 2355 2591 457359056 457359280 1.630000e-22 117.0
31 TraesCS7B01G362500 chr2A 77.665 197 26 13 2398 2591 719563885 719563704 1.270000e-18 104.0
32 TraesCS7B01G362500 chr4D 84.158 101 14 2 2349 2448 374604141 374604240 2.120000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G362500 chr7B 624245336 624247926 2590 False 4785.0 4785 100.0000 1 2591 1 chr7B.!!$F2 2590
1 TraesCS7B01G362500 chr7D 568418778 568420667 1889 False 1408.0 2529 93.0715 1 2345 2 chr7D.!!$F2 2344
2 TraesCS7B01G362500 chr7D 7465503 7466117 614 True 560.0 560 83.8970 997 1587 1 chr7D.!!$R2 590
3 TraesCS7B01G362500 chr7A 657154038 657155755 1717 False 2261.0 2261 90.9830 1 1667 1 chr7A.!!$F2 1666
4 TraesCS7B01G362500 chr7A 8403691 8404223 532 True 291.7 514 89.2600 1079 1587 2 chr7A.!!$R1 508
5 TraesCS7B01G362500 chr7A 8410503 8411035 532 True 291.7 514 89.2600 1079 1587 2 chr7A.!!$R2 508
6 TraesCS7B01G362500 chr4A 732788795 732789406 611 True 555.0 555 83.8450 997 1584 1 chr4A.!!$R2 587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
983 1063 0.445436 CGATCCACAAGTTGAGCTGC 59.555 55.0 10.54 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2394 2501 0.040067 CGTTTTCAGCAAGTCAGGCC 60.04 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
294 301 5.208890 AGTGGCACTGATTATCTAGTACCA 58.791 41.667 21.37 10.55 37.87 3.25
366 373 5.715434 TTTGTTTAAGGTAACCATCTGGC 57.285 39.130 0.00 0.00 39.32 4.85
442 449 5.685195 TTACCGCGTTAAGAAGATTTACG 57.315 39.130 4.92 0.00 0.00 3.18
456 463 2.846039 TTTACGCCGAGCAAACAAAA 57.154 40.000 0.00 0.00 0.00 2.44
498 506 9.143631 GCTAAACTTACGTAGATTGTTTAAGGA 57.856 33.333 17.42 6.36 34.22 3.36
628 675 1.867865 GCTGACCCGATTAGCTTTAGC 59.132 52.381 0.00 0.00 42.49 3.09
642 689 2.285220 GCTTTAGCTTGAATCGATCGCA 59.715 45.455 11.09 0.00 38.21 5.10
661 708 3.848019 CGCAAACTAGTGATTGTCATTGC 59.152 43.478 12.51 12.51 35.31 3.56
662 709 4.378770 CGCAAACTAGTGATTGTCATTGCT 60.379 41.667 17.76 0.00 36.05 3.91
663 710 5.464168 GCAAACTAGTGATTGTCATTGCTT 58.536 37.500 14.45 0.00 35.60 3.91
664 711 5.570589 GCAAACTAGTGATTGTCATTGCTTC 59.429 40.000 14.45 0.00 35.60 3.86
665 712 6.671190 CAAACTAGTGATTGTCATTGCTTCA 58.329 36.000 0.00 0.00 0.00 3.02
666 713 7.310664 CAAACTAGTGATTGTCATTGCTTCAT 58.689 34.615 0.00 0.00 0.00 2.57
784 846 6.017934 CGAACCGAAATGTCTATTGGATCAAT 60.018 38.462 0.00 0.00 37.80 2.57
795 857 7.335171 TGTCTATTGGATCAATGAGAGTTTGTG 59.665 37.037 0.00 0.00 35.54 3.33
823 895 1.000145 GTCCTCGAAATCAACGGCTC 59.000 55.000 0.00 0.00 0.00 4.70
824 896 0.457853 TCCTCGAAATCAACGGCTCG 60.458 55.000 0.00 0.00 0.00 5.03
901 973 4.398598 GGCGCGCAAACCACGAAT 62.399 61.111 34.42 0.00 0.00 3.34
916 996 9.534565 CAAACCACGAATATCCCATCTATATAG 57.465 37.037 3.10 3.10 0.00 1.31
928 1008 5.871524 CCCATCTATATAGACACACACATGC 59.128 44.000 14.71 0.00 34.72 4.06
929 1009 5.871524 CCATCTATATAGACACACACATGCC 59.128 44.000 14.71 0.00 34.72 4.40
947 1027 0.883833 CCAAGGCGTGCTTCTGATTT 59.116 50.000 0.00 0.00 0.00 2.17
983 1063 0.445436 CGATCCACAAGTTGAGCTGC 59.555 55.000 10.54 0.00 0.00 5.25
984 1064 1.527034 GATCCACAAGTTGAGCTGCA 58.473 50.000 10.54 0.00 0.00 4.41
1056 1136 1.078143 GCAAGATCAGGAAGGCGGT 60.078 57.895 0.00 0.00 0.00 5.68
1117 1197 0.036577 GAGGATGATCATGCGGGAGG 60.037 60.000 19.97 0.00 34.10 4.30
1485 1568 1.215647 GACGACATGCCTCCTCGTT 59.784 57.895 9.34 0.00 40.63 3.85
1519 1623 4.681978 AGCAGGCGACGTTGGACC 62.682 66.667 4.64 0.00 0.00 4.46
1645 1749 9.695526 AGATCATCGAAGAAAGAAGATATGAAG 57.304 33.333 0.00 0.00 43.58 3.02
1667 1771 4.695455 AGTTGAATTCATGTAGTGTTCGGG 59.305 41.667 9.40 0.00 0.00 5.14
1668 1772 4.545208 TGAATTCATGTAGTGTTCGGGA 57.455 40.909 3.38 0.00 0.00 5.14
1669 1773 4.250464 TGAATTCATGTAGTGTTCGGGAC 58.750 43.478 3.38 0.00 0.00 4.46
1686 1790 4.680171 GGGACGTGGATTTTTAGAACAG 57.320 45.455 0.00 0.00 0.00 3.16
1687 1791 3.119955 GGGACGTGGATTTTTAGAACAGC 60.120 47.826 0.00 0.00 0.00 4.40
1688 1792 3.751698 GGACGTGGATTTTTAGAACAGCT 59.248 43.478 0.00 0.00 0.00 4.24
1689 1793 4.378459 GGACGTGGATTTTTAGAACAGCTG 60.378 45.833 13.48 13.48 0.00 4.24
1690 1794 3.058224 ACGTGGATTTTTAGAACAGCTGC 60.058 43.478 15.27 0.00 0.00 5.25
1691 1795 3.058293 CGTGGATTTTTAGAACAGCTGCA 60.058 43.478 15.27 0.00 0.00 4.41
1692 1796 4.229876 GTGGATTTTTAGAACAGCTGCAC 58.770 43.478 15.27 8.20 0.00 4.57
1693 1797 3.255642 TGGATTTTTAGAACAGCTGCACC 59.744 43.478 15.27 2.79 0.00 5.01
1694 1798 3.367395 GGATTTTTAGAACAGCTGCACCC 60.367 47.826 15.27 0.00 0.00 4.61
1695 1799 1.616159 TTTTAGAACAGCTGCACCCC 58.384 50.000 15.27 0.00 0.00 4.95
1696 1800 0.605319 TTTAGAACAGCTGCACCCCG 60.605 55.000 15.27 0.00 0.00 5.73
1697 1801 2.463589 TTAGAACAGCTGCACCCCGG 62.464 60.000 15.27 0.00 0.00 5.73
1706 1810 4.123545 GCACCCCGGCCCTTGTAT 62.124 66.667 0.00 0.00 0.00 2.29
1707 1811 2.192175 CACCCCGGCCCTTGTATC 59.808 66.667 0.00 0.00 0.00 2.24
1708 1812 3.094498 ACCCCGGCCCTTGTATCC 61.094 66.667 0.00 0.00 0.00 2.59
1709 1813 2.772622 CCCCGGCCCTTGTATCCT 60.773 66.667 0.00 0.00 0.00 3.24
1710 1814 2.510906 CCCGGCCCTTGTATCCTG 59.489 66.667 0.00 0.00 0.00 3.86
1711 1815 2.510906 CCGGCCCTTGTATCCTGG 59.489 66.667 0.00 0.00 0.00 4.45
1712 1816 2.375345 CCGGCCCTTGTATCCTGGT 61.375 63.158 0.00 0.00 0.00 4.00
1713 1817 1.607612 CGGCCCTTGTATCCTGGTT 59.392 57.895 0.00 0.00 0.00 3.67
1714 1818 0.748005 CGGCCCTTGTATCCTGGTTG 60.748 60.000 0.00 0.00 0.00 3.77
1715 1819 0.331616 GGCCCTTGTATCCTGGTTGT 59.668 55.000 0.00 0.00 0.00 3.32
1716 1820 1.682087 GGCCCTTGTATCCTGGTTGTC 60.682 57.143 0.00 0.00 0.00 3.18
1717 1821 1.682087 GCCCTTGTATCCTGGTTGTCC 60.682 57.143 0.00 0.00 0.00 4.02
1718 1822 1.633432 CCCTTGTATCCTGGTTGTCCA 59.367 52.381 0.00 0.00 42.05 4.02
1719 1823 2.041081 CCCTTGTATCCTGGTTGTCCAA 59.959 50.000 0.00 0.00 43.81 3.53
1720 1824 3.309121 CCCTTGTATCCTGGTTGTCCAAT 60.309 47.826 0.00 0.00 43.81 3.16
1721 1825 4.080015 CCCTTGTATCCTGGTTGTCCAATA 60.080 45.833 0.00 0.00 43.81 1.90
1722 1826 5.399038 CCCTTGTATCCTGGTTGTCCAATAT 60.399 44.000 0.00 0.00 43.81 1.28
1723 1827 6.129179 CCTTGTATCCTGGTTGTCCAATATT 58.871 40.000 0.00 0.00 43.81 1.28
1724 1828 6.039717 CCTTGTATCCTGGTTGTCCAATATTG 59.960 42.308 8.58 8.58 43.81 1.90
1725 1829 4.887071 TGTATCCTGGTTGTCCAATATTGC 59.113 41.667 10.11 0.00 43.81 3.56
1726 1830 3.737559 TCCTGGTTGTCCAATATTGCT 57.262 42.857 10.11 0.00 43.81 3.91
1727 1831 4.046286 TCCTGGTTGTCCAATATTGCTT 57.954 40.909 10.11 0.00 43.81 3.91
1728 1832 4.415596 TCCTGGTTGTCCAATATTGCTTT 58.584 39.130 10.11 0.00 43.81 3.51
1729 1833 5.575157 TCCTGGTTGTCCAATATTGCTTTA 58.425 37.500 10.11 0.00 43.81 1.85
1730 1834 6.013379 TCCTGGTTGTCCAATATTGCTTTAA 58.987 36.000 10.11 0.04 43.81 1.52
1731 1835 6.152661 TCCTGGTTGTCCAATATTGCTTTAAG 59.847 38.462 10.11 1.79 43.81 1.85
1732 1836 6.152661 CCTGGTTGTCCAATATTGCTTTAAGA 59.847 38.462 10.11 0.00 43.81 2.10
1733 1837 7.147846 CCTGGTTGTCCAATATTGCTTTAAGAT 60.148 37.037 10.11 0.00 43.81 2.40
1734 1838 7.771183 TGGTTGTCCAATATTGCTTTAAGATC 58.229 34.615 10.11 0.00 41.25 2.75
1735 1839 7.615365 TGGTTGTCCAATATTGCTTTAAGATCT 59.385 33.333 10.11 0.00 41.25 2.75
1736 1840 7.917505 GGTTGTCCAATATTGCTTTAAGATCTG 59.082 37.037 10.11 0.00 0.00 2.90
1737 1841 8.462016 GTTGTCCAATATTGCTTTAAGATCTGT 58.538 33.333 10.11 0.00 0.00 3.41
1738 1842 7.988737 TGTCCAATATTGCTTTAAGATCTGTG 58.011 34.615 10.11 0.00 0.00 3.66
1739 1843 6.914757 GTCCAATATTGCTTTAAGATCTGTGC 59.085 38.462 10.11 0.00 0.00 4.57
1740 1844 6.602803 TCCAATATTGCTTTAAGATCTGTGCA 59.397 34.615 10.11 1.97 0.00 4.57
1741 1845 7.122501 TCCAATATTGCTTTAAGATCTGTGCAA 59.877 33.333 19.69 19.69 43.09 4.08
1742 1846 7.221452 CCAATATTGCTTTAAGATCTGTGCAAC 59.779 37.037 19.76 2.27 42.01 4.17
1744 1848 4.488126 TGCTTTAAGATCTGTGCAACAC 57.512 40.909 0.00 0.00 45.67 3.32
1745 1849 3.882288 TGCTTTAAGATCTGTGCAACACA 59.118 39.130 0.00 0.00 45.67 3.72
1746 1850 4.337836 TGCTTTAAGATCTGTGCAACACAA 59.662 37.500 0.00 0.00 45.67 3.33
1747 1851 4.676924 GCTTTAAGATCTGTGCAACACAAC 59.323 41.667 0.00 0.00 45.67 3.32
1748 1852 5.506317 GCTTTAAGATCTGTGCAACACAACT 60.506 40.000 0.00 0.00 45.67 3.16
1749 1853 6.293407 GCTTTAAGATCTGTGCAACACAACTA 60.293 38.462 0.00 0.00 45.67 2.24
1750 1854 7.561021 TTTAAGATCTGTGCAACACAACTAA 57.439 32.000 0.00 0.00 45.67 2.24
1751 1855 5.424121 AAGATCTGTGCAACACAACTAAC 57.576 39.130 0.00 0.00 45.67 2.34
1752 1856 4.708177 AGATCTGTGCAACACAACTAACT 58.292 39.130 0.00 0.00 45.67 2.24
1753 1857 5.126067 AGATCTGTGCAACACAACTAACTT 58.874 37.500 0.00 0.00 45.67 2.66
1754 1858 5.590259 AGATCTGTGCAACACAACTAACTTT 59.410 36.000 0.00 0.00 45.67 2.66
1755 1859 5.637006 TCTGTGCAACACAACTAACTTTT 57.363 34.783 1.64 0.00 45.67 2.27
1756 1860 5.636837 TCTGTGCAACACAACTAACTTTTC 58.363 37.500 1.64 0.00 45.67 2.29
1757 1861 4.407818 TGTGCAACACAACTAACTTTTCG 58.592 39.130 0.00 0.00 45.67 3.46
1758 1862 4.083217 TGTGCAACACAACTAACTTTTCGT 60.083 37.500 0.00 0.00 45.67 3.85
1759 1863 5.121925 TGTGCAACACAACTAACTTTTCGTA 59.878 36.000 0.00 0.00 45.67 3.43
1760 1864 6.183360 TGTGCAACACAACTAACTTTTCGTAT 60.183 34.615 0.00 0.00 45.67 3.06
1761 1865 6.140108 GTGCAACACAACTAACTTTTCGTATG 59.860 38.462 0.00 0.00 36.32 2.39
1762 1866 6.037281 TGCAACACAACTAACTTTTCGTATGA 59.963 34.615 0.00 0.00 0.00 2.15
1763 1867 6.908284 GCAACACAACTAACTTTTCGTATGAA 59.092 34.615 0.00 0.00 0.00 2.57
1764 1868 7.429920 GCAACACAACTAACTTTTCGTATGAAA 59.570 33.333 6.00 6.00 42.21 2.69
1800 1904 9.950680 TTTTGTTTCTCTCACATAAAAGATGTC 57.049 29.630 0.00 0.00 0.00 3.06
1801 1905 8.908786 TTGTTTCTCTCACATAAAAGATGTCT 57.091 30.769 0.00 0.00 0.00 3.41
1802 1906 8.908786 TGTTTCTCTCACATAAAAGATGTCTT 57.091 30.769 0.00 0.00 37.91 3.01
1803 1907 8.777413 TGTTTCTCTCACATAAAAGATGTCTTG 58.223 33.333 0.00 0.00 36.12 3.02
1804 1908 8.993121 GTTTCTCTCACATAAAAGATGTCTTGA 58.007 33.333 0.00 0.00 36.12 3.02
1805 1909 9.559732 TTTCTCTCACATAAAAGATGTCTTGAA 57.440 29.630 0.00 0.00 36.12 2.69
1806 1910 8.539770 TCTCTCACATAAAAGATGTCTTGAAC 57.460 34.615 0.00 0.00 36.12 3.18
1807 1911 8.370940 TCTCTCACATAAAAGATGTCTTGAACT 58.629 33.333 0.00 0.00 36.12 3.01
1808 1912 8.908786 TCTCACATAAAAGATGTCTTGAACTT 57.091 30.769 0.00 0.00 36.12 2.66
1809 1913 8.993121 TCTCACATAAAAGATGTCTTGAACTTC 58.007 33.333 0.00 0.00 36.12 3.01
1810 1914 8.675705 TCACATAAAAGATGTCTTGAACTTCA 57.324 30.769 0.00 0.00 36.12 3.02
1811 1915 9.119418 TCACATAAAAGATGTCTTGAACTTCAA 57.881 29.630 4.16 4.16 36.12 2.69
1812 1916 9.734620 CACATAAAAGATGTCTTGAACTTCAAA 57.265 29.630 5.72 0.00 35.73 2.69
1813 1917 9.736023 ACATAAAAGATGTCTTGAACTTCAAAC 57.264 29.630 5.72 7.48 35.73 2.93
1814 1918 9.185192 CATAAAAGATGTCTTGAACTTCAAACC 57.815 33.333 5.72 0.54 35.73 3.27
1815 1919 7.410120 AAAAGATGTCTTGAACTTCAAACCT 57.590 32.000 5.72 1.53 35.73 3.50
1816 1920 7.410120 AAAGATGTCTTGAACTTCAAACCTT 57.590 32.000 5.72 2.93 35.73 3.50
1817 1921 7.410120 AAGATGTCTTGAACTTCAAACCTTT 57.590 32.000 5.72 1.26 35.73 3.11
1818 1922 6.799512 AGATGTCTTGAACTTCAAACCTTTG 58.200 36.000 5.72 0.00 35.73 2.77
1819 1923 4.743493 TGTCTTGAACTTCAAACCTTTGC 58.257 39.130 5.72 0.00 35.73 3.68
1820 1924 4.219507 TGTCTTGAACTTCAAACCTTTGCA 59.780 37.500 5.72 0.00 35.73 4.08
1821 1925 4.800471 GTCTTGAACTTCAAACCTTTGCAG 59.200 41.667 5.72 0.00 35.73 4.41
1822 1926 3.163630 TGAACTTCAAACCTTTGCAGC 57.836 42.857 0.00 0.00 35.30 5.25
1823 1927 2.119457 GAACTTCAAACCTTTGCAGCG 58.881 47.619 0.00 0.00 35.30 5.18
1824 1928 1.102978 ACTTCAAACCTTTGCAGCGT 58.897 45.000 0.00 0.00 35.30 5.07
1825 1929 1.202290 ACTTCAAACCTTTGCAGCGTG 60.202 47.619 0.00 0.00 35.30 5.34
1826 1930 0.102120 TTCAAACCTTTGCAGCGTGG 59.898 50.000 0.00 0.00 38.05 4.94
1827 1931 1.950630 CAAACCTTTGCAGCGTGGC 60.951 57.895 0.00 0.00 0.00 5.01
1828 1932 2.422231 AAACCTTTGCAGCGTGGCA 61.422 52.632 0.00 0.00 43.19 4.92
1834 1938 3.218470 TGCAGCGTGGCAAAGCTT 61.218 55.556 14.91 0.00 39.27 3.74
1835 1939 2.028043 GCAGCGTGGCAAAGCTTT 59.972 55.556 14.91 5.69 39.27 3.51
1836 1940 2.018324 GCAGCGTGGCAAAGCTTTC 61.018 57.895 9.23 4.47 39.27 2.62
1837 1941 1.372128 CAGCGTGGCAAAGCTTTCC 60.372 57.895 9.23 13.81 39.27 3.13
1838 1942 1.827789 AGCGTGGCAAAGCTTTCCA 60.828 52.632 19.97 19.97 37.97 3.53
1839 1943 1.181098 AGCGTGGCAAAGCTTTCCAT 61.181 50.000 24.04 12.24 37.97 3.41
1840 1944 0.733909 GCGTGGCAAAGCTTTCCATC 60.734 55.000 24.04 17.74 31.83 3.51
1841 1945 0.883833 CGTGGCAAAGCTTTCCATCT 59.116 50.000 24.04 0.00 31.83 2.90
1842 1946 2.083774 CGTGGCAAAGCTTTCCATCTA 58.916 47.619 24.04 6.48 31.83 1.98
1843 1947 2.096496 CGTGGCAAAGCTTTCCATCTAG 59.904 50.000 24.04 15.77 31.83 2.43
1844 1948 3.347216 GTGGCAAAGCTTTCCATCTAGA 58.653 45.455 24.04 0.00 31.83 2.43
1845 1949 3.758554 GTGGCAAAGCTTTCCATCTAGAA 59.241 43.478 24.04 5.89 31.83 2.10
1846 1950 4.400567 GTGGCAAAGCTTTCCATCTAGAAT 59.599 41.667 24.04 0.00 31.83 2.40
1847 1951 4.641989 TGGCAAAGCTTTCCATCTAGAATC 59.358 41.667 19.97 0.00 0.00 2.52
1848 1952 4.886489 GGCAAAGCTTTCCATCTAGAATCT 59.114 41.667 9.23 0.00 0.00 2.40
1849 1953 6.058183 GGCAAAGCTTTCCATCTAGAATCTA 58.942 40.000 9.23 0.00 0.00 1.98
1850 1954 6.204495 GGCAAAGCTTTCCATCTAGAATCTAG 59.796 42.308 9.23 10.93 0.00 2.43
1851 1955 6.204495 GCAAAGCTTTCCATCTAGAATCTAGG 59.796 42.308 16.47 2.83 0.00 3.02
1852 1956 7.504403 CAAAGCTTTCCATCTAGAATCTAGGA 58.496 38.462 16.47 5.18 0.00 2.94
1853 1957 7.870426 AAGCTTTCCATCTAGAATCTAGGAT 57.130 36.000 16.47 6.87 0.00 3.24
1854 1958 8.964533 AAGCTTTCCATCTAGAATCTAGGATA 57.035 34.615 16.47 2.95 0.00 2.59
1855 1959 8.964533 AGCTTTCCATCTAGAATCTAGGATAA 57.035 34.615 16.47 4.76 0.00 1.75
1856 1960 9.386122 AGCTTTCCATCTAGAATCTAGGATAAA 57.614 33.333 16.47 10.96 0.00 1.40
1992 2096 9.522804 AGATTCTAGATAGAAAACTTTGCTACG 57.477 33.333 6.40 0.00 44.63 3.51
1993 2097 7.521509 TTCTAGATAGAAAACTTTGCTACGC 57.478 36.000 0.00 0.00 39.22 4.42
1994 2098 6.864342 TCTAGATAGAAAACTTTGCTACGCT 58.136 36.000 0.00 0.00 0.00 5.07
1995 2099 5.786401 AGATAGAAAACTTTGCTACGCTG 57.214 39.130 0.00 0.00 0.00 5.18
1996 2100 2.688364 AGAAAACTTTGCTACGCTGC 57.312 45.000 0.00 0.00 0.00 5.25
1997 2101 1.946768 AGAAAACTTTGCTACGCTGCA 59.053 42.857 0.00 0.00 41.65 4.41
2003 2107 4.473643 TGCTACGCTGCAAAGGTT 57.526 50.000 0.00 0.00 40.29 3.50
2004 2108 2.714259 TGCTACGCTGCAAAGGTTT 58.286 47.368 0.00 0.00 40.29 3.27
2005 2109 0.310543 TGCTACGCTGCAAAGGTTTG 59.689 50.000 0.00 0.00 40.29 2.93
2006 2110 0.591170 GCTACGCTGCAAAGGTTTGA 59.409 50.000 6.63 0.00 40.55 2.69
2007 2111 1.001815 GCTACGCTGCAAAGGTTTGAA 60.002 47.619 6.63 0.00 40.55 2.69
2008 2112 2.650608 CTACGCTGCAAAGGTTTGAAC 58.349 47.619 6.63 0.00 40.55 3.18
2009 2113 1.102978 ACGCTGCAAAGGTTTGAACT 58.897 45.000 6.63 0.00 40.55 3.01
2010 2114 1.476488 ACGCTGCAAAGGTTTGAACTT 59.524 42.857 6.63 0.00 40.55 2.66
2011 2115 2.119457 CGCTGCAAAGGTTTGAACTTC 58.881 47.619 6.63 0.00 40.55 3.01
2012 2116 2.479389 CGCTGCAAAGGTTTGAACTTCA 60.479 45.455 6.63 0.00 40.55 3.02
2013 2117 3.520569 GCTGCAAAGGTTTGAACTTCAA 58.479 40.909 6.63 0.00 40.55 2.69
2014 2118 3.932089 GCTGCAAAGGTTTGAACTTCAAA 59.068 39.130 12.12 12.12 43.37 2.69
2015 2119 4.391523 GCTGCAAAGGTTTGAACTTCAAAA 59.608 37.500 16.79 1.47 46.53 2.44
2016 2120 5.065090 GCTGCAAAGGTTTGAACTTCAAAAT 59.935 36.000 16.79 7.70 46.53 1.82
2017 2121 6.257630 GCTGCAAAGGTTTGAACTTCAAAATA 59.742 34.615 16.79 0.00 46.53 1.40
2018 2122 7.041848 GCTGCAAAGGTTTGAACTTCAAAATAT 60.042 33.333 16.79 5.25 46.53 1.28
2019 2123 8.140677 TGCAAAGGTTTGAACTTCAAAATATG 57.859 30.769 16.79 13.98 46.53 1.78
2020 2124 7.768120 TGCAAAGGTTTGAACTTCAAAATATGT 59.232 29.630 16.79 1.26 46.53 2.29
2021 2125 8.611757 GCAAAGGTTTGAACTTCAAAATATGTT 58.388 29.630 16.79 6.38 46.53 2.71
2068 2172 1.203065 GTGTTTGCACGAATCGCGA 59.797 52.632 13.09 13.09 44.57 5.87
2069 2173 0.179225 GTGTTTGCACGAATCGCGAT 60.179 50.000 17.62 17.62 44.57 4.58
2070 2174 0.179227 TGTTTGCACGAATCGCGATG 60.179 50.000 24.47 13.82 44.57 3.84
2071 2175 1.225991 TTTGCACGAATCGCGATGC 60.226 52.632 24.47 23.10 44.57 3.91
2084 2188 1.572941 CGATGCGCAGAATGGATGG 59.427 57.895 18.32 0.00 35.86 3.51
2085 2189 1.285023 GATGCGCAGAATGGATGGC 59.715 57.895 18.32 0.00 35.86 4.40
2086 2190 1.152819 ATGCGCAGAATGGATGGCT 60.153 52.632 18.32 0.00 35.86 4.75
2087 2191 0.109153 ATGCGCAGAATGGATGGCTA 59.891 50.000 18.32 0.00 35.86 3.93
2088 2192 0.533531 TGCGCAGAATGGATGGCTAG 60.534 55.000 5.66 0.00 35.86 3.42
2089 2193 0.250038 GCGCAGAATGGATGGCTAGA 60.250 55.000 0.30 0.00 35.86 2.43
2090 2194 1.610102 GCGCAGAATGGATGGCTAGAT 60.610 52.381 0.30 0.00 35.86 1.98
2091 2195 2.354103 GCGCAGAATGGATGGCTAGATA 60.354 50.000 0.30 0.00 35.86 1.98
2092 2196 3.519579 CGCAGAATGGATGGCTAGATAG 58.480 50.000 0.00 0.00 35.86 2.08
2093 2197 3.194329 CGCAGAATGGATGGCTAGATAGA 59.806 47.826 0.00 0.00 35.86 1.98
2094 2198 4.677514 CGCAGAATGGATGGCTAGATAGAG 60.678 50.000 0.00 0.00 35.86 2.43
2095 2199 4.465660 GCAGAATGGATGGCTAGATAGAGA 59.534 45.833 0.00 0.00 35.86 3.10
2096 2200 5.394443 GCAGAATGGATGGCTAGATAGAGAG 60.394 48.000 0.00 0.00 35.86 3.20
2097 2201 5.127519 CAGAATGGATGGCTAGATAGAGAGG 59.872 48.000 0.00 0.00 0.00 3.69
2098 2202 3.464720 TGGATGGCTAGATAGAGAGGG 57.535 52.381 0.00 0.00 0.00 4.30
2099 2203 2.107366 GGATGGCTAGATAGAGAGGGC 58.893 57.143 0.00 0.00 0.00 5.19
2100 2204 2.107366 GATGGCTAGATAGAGAGGGCC 58.893 57.143 0.00 0.00 39.93 5.80
2101 2205 0.115349 TGGCTAGATAGAGAGGGCCC 59.885 60.000 16.46 16.46 38.89 5.80
2102 2206 0.968393 GGCTAGATAGAGAGGGCCCG 60.968 65.000 18.44 0.00 34.19 6.13
2103 2207 0.968393 GCTAGATAGAGAGGGCCCGG 60.968 65.000 18.44 0.00 0.00 5.73
2104 2208 0.323908 CTAGATAGAGAGGGCCCGGG 60.324 65.000 19.09 19.09 0.00 5.73
2105 2209 1.072505 TAGATAGAGAGGGCCCGGGT 61.073 60.000 24.63 4.33 0.00 5.28
2106 2210 2.122813 ATAGAGAGGGCCCGGGTG 60.123 66.667 24.63 0.00 0.00 4.61
2131 2235 7.842525 CAGCTGTGCTATTTTATATTTTCGG 57.157 36.000 5.25 0.00 36.40 4.30
2132 2236 7.417612 CAGCTGTGCTATTTTATATTTTCGGT 58.582 34.615 5.25 0.00 36.40 4.69
2133 2237 8.556194 CAGCTGTGCTATTTTATATTTTCGGTA 58.444 33.333 5.25 0.00 36.40 4.02
2134 2238 8.774586 AGCTGTGCTATTTTATATTTTCGGTAG 58.225 33.333 0.00 0.00 36.99 3.18
2135 2239 8.557029 GCTGTGCTATTTTATATTTTCGGTAGT 58.443 33.333 0.00 0.00 0.00 2.73
2136 2240 9.864034 CTGTGCTATTTTATATTTTCGGTAGTG 57.136 33.333 0.00 0.00 0.00 2.74
2137 2241 9.386010 TGTGCTATTTTATATTTTCGGTAGTGT 57.614 29.630 0.00 0.00 0.00 3.55
2140 2244 9.577003 GCTATTTTATATTTTCGGTAGTGTTCG 57.423 33.333 0.00 0.00 0.00 3.95
2143 2247 8.761575 TTTTATATTTTCGGTAGTGTTCGACT 57.238 30.769 0.00 0.00 38.88 4.18
2144 2248 7.745022 TTATATTTTCGGTAGTGTTCGACTG 57.255 36.000 0.00 0.00 35.96 3.51
2145 2249 3.441496 TTTTCGGTAGTGTTCGACTGT 57.559 42.857 0.00 0.00 35.96 3.55
2146 2250 3.441496 TTTCGGTAGTGTTCGACTGTT 57.559 42.857 0.00 0.00 35.96 3.16
2147 2251 2.693797 TCGGTAGTGTTCGACTGTTC 57.306 50.000 0.00 0.00 35.96 3.18
2158 2262 3.086818 TCGACTGTTCGTCAATGACAA 57.913 42.857 14.24 4.39 46.01 3.18
2165 2269 5.527214 ACTGTTCGTCAATGACAATCTCAAA 59.473 36.000 14.24 0.00 32.09 2.69
2200 2307 7.387122 AGTCTAGTACGATGCTACGATTGATTA 59.613 37.037 9.70 0.00 37.03 1.75
2236 2343 2.631418 TCTCAAGTTCCATCGACGAC 57.369 50.000 0.00 0.00 0.00 4.34
2240 2347 0.806868 AAGTTCCATCGACGACGCTA 59.193 50.000 0.00 0.00 39.58 4.26
2241 2348 0.377554 AGTTCCATCGACGACGCTAG 59.622 55.000 0.00 0.00 39.58 3.42
2292 2399 2.571757 CTCCTGCTCGCCGTTGTA 59.428 61.111 0.00 0.00 0.00 2.41
2293 2400 1.805945 CTCCTGCTCGCCGTTGTAC 60.806 63.158 0.00 0.00 0.00 2.90
2345 2452 2.202756 CCCAGAGGAACGCGTAGC 60.203 66.667 14.46 8.00 44.66 3.58
2346 2453 2.711922 CCCAGAGGAACGCGTAGCT 61.712 63.158 14.46 4.56 45.80 3.32
2347 2454 2.227089 CCCAGAGGAACGCGTAGCTT 62.227 60.000 14.46 3.85 45.80 3.74
2360 2467 3.374389 CGTAGCTTGCATACACTGTTG 57.626 47.619 0.00 0.00 0.00 3.33
2361 2468 2.094258 CGTAGCTTGCATACACTGTTGG 59.906 50.000 0.00 0.00 0.00 3.77
2362 2469 1.538047 AGCTTGCATACACTGTTGGG 58.462 50.000 0.00 0.00 0.00 4.12
2363 2470 0.109132 GCTTGCATACACTGTTGGGC 60.109 55.000 0.00 0.00 0.00 5.36
2364 2471 1.538047 CTTGCATACACTGTTGGGCT 58.462 50.000 0.00 0.00 0.00 5.19
2365 2472 1.888512 CTTGCATACACTGTTGGGCTT 59.111 47.619 0.00 0.00 0.00 4.35
2366 2473 1.246649 TGCATACACTGTTGGGCTTG 58.753 50.000 0.00 0.00 0.00 4.01
2367 2474 1.247567 GCATACACTGTTGGGCTTGT 58.752 50.000 0.00 0.00 0.00 3.16
2368 2475 2.224646 TGCATACACTGTTGGGCTTGTA 60.225 45.455 0.00 0.00 0.00 2.41
2369 2476 3.016736 GCATACACTGTTGGGCTTGTAT 58.983 45.455 0.00 0.00 35.91 2.29
2370 2477 4.196193 GCATACACTGTTGGGCTTGTATA 58.804 43.478 0.00 0.00 34.18 1.47
2371 2478 4.273480 GCATACACTGTTGGGCTTGTATAG 59.727 45.833 0.00 0.00 34.18 1.31
2394 2501 6.852664 AGCACGAAATTTAAAATACCTCTGG 58.147 36.000 0.00 0.00 0.00 3.86
2395 2502 6.033966 GCACGAAATTTAAAATACCTCTGGG 58.966 40.000 0.00 0.00 38.88 4.45
2396 2503 6.033966 CACGAAATTTAAAATACCTCTGGGC 58.966 40.000 0.00 0.00 35.63 5.36
2397 2504 5.126545 ACGAAATTTAAAATACCTCTGGGCC 59.873 40.000 0.00 0.00 35.63 5.80
2398 2505 5.359860 CGAAATTTAAAATACCTCTGGGCCT 59.640 40.000 4.53 0.00 35.63 5.19
2399 2506 6.544928 AAATTTAAAATACCTCTGGGCCTG 57.455 37.500 4.53 4.06 35.63 4.85
2400 2507 4.938575 TTTAAAATACCTCTGGGCCTGA 57.061 40.909 12.90 12.90 35.63 3.86
2401 2508 2.808906 AAAATACCTCTGGGCCTGAC 57.191 50.000 9.30 0.00 35.63 3.51
2402 2509 1.972588 AAATACCTCTGGGCCTGACT 58.027 50.000 9.30 0.29 35.63 3.41
2403 2510 1.972588 AATACCTCTGGGCCTGACTT 58.027 50.000 9.30 1.84 35.63 3.01
2404 2511 1.207791 ATACCTCTGGGCCTGACTTG 58.792 55.000 9.30 3.92 35.63 3.16
2405 2512 1.553690 TACCTCTGGGCCTGACTTGC 61.554 60.000 9.30 0.00 35.63 4.01
2406 2513 2.600729 CCTCTGGGCCTGACTTGCT 61.601 63.158 9.30 0.00 0.00 3.91
2407 2514 1.376942 CTCTGGGCCTGACTTGCTG 60.377 63.158 9.30 0.00 0.00 4.41
2408 2515 1.834856 CTCTGGGCCTGACTTGCTGA 61.835 60.000 9.30 0.00 0.00 4.26
2409 2516 1.073722 CTGGGCCTGACTTGCTGAA 59.926 57.895 4.53 0.00 0.00 3.02
2410 2517 0.538057 CTGGGCCTGACTTGCTGAAA 60.538 55.000 4.53 0.00 0.00 2.69
2411 2518 0.106268 TGGGCCTGACTTGCTGAAAA 60.106 50.000 4.53 0.00 0.00 2.29
2412 2519 0.315251 GGGCCTGACTTGCTGAAAAC 59.685 55.000 0.84 0.00 0.00 2.43
2413 2520 0.040067 GGCCTGACTTGCTGAAAACG 60.040 55.000 0.00 0.00 0.00 3.60
2414 2521 0.663153 GCCTGACTTGCTGAAAACGT 59.337 50.000 0.00 0.00 0.00 3.99
2415 2522 1.065551 GCCTGACTTGCTGAAAACGTT 59.934 47.619 0.00 0.00 0.00 3.99
2416 2523 2.854805 GCCTGACTTGCTGAAAACGTTC 60.855 50.000 0.00 0.00 0.00 3.95
2417 2524 2.354510 CCTGACTTGCTGAAAACGTTCA 59.645 45.455 0.00 0.00 41.57 3.18
2425 2532 1.872388 TGAAAACGTTCAGATCGGCA 58.128 45.000 0.00 0.00 38.88 5.69
2426 2533 1.798223 TGAAAACGTTCAGATCGGCAG 59.202 47.619 0.00 0.00 38.88 4.85
2427 2534 1.798813 GAAAACGTTCAGATCGGCAGT 59.201 47.619 0.00 0.00 33.61 4.40
2428 2535 1.878953 AAACGTTCAGATCGGCAGTT 58.121 45.000 0.00 0.00 0.00 3.16
2429 2536 1.878953 AACGTTCAGATCGGCAGTTT 58.121 45.000 0.00 0.00 0.00 2.66
2430 2537 1.429463 ACGTTCAGATCGGCAGTTTC 58.571 50.000 5.88 0.00 0.00 2.78
2431 2538 1.000955 ACGTTCAGATCGGCAGTTTCT 59.999 47.619 5.88 0.00 0.00 2.52
2432 2539 2.069273 CGTTCAGATCGGCAGTTTCTT 58.931 47.619 0.00 0.00 0.00 2.52
2433 2540 2.159787 CGTTCAGATCGGCAGTTTCTTG 60.160 50.000 0.00 0.00 0.00 3.02
2434 2541 2.808543 GTTCAGATCGGCAGTTTCTTGT 59.191 45.455 0.00 0.00 0.00 3.16
2435 2542 2.416747 TCAGATCGGCAGTTTCTTGTG 58.583 47.619 0.00 0.00 0.00 3.33
2436 2543 2.037121 TCAGATCGGCAGTTTCTTGTGA 59.963 45.455 0.00 0.00 0.00 3.58
2437 2544 2.414481 CAGATCGGCAGTTTCTTGTGAG 59.586 50.000 0.00 0.00 0.00 3.51
2438 2545 1.129437 GATCGGCAGTTTCTTGTGAGC 59.871 52.381 0.00 0.00 0.00 4.26
2439 2546 0.884704 TCGGCAGTTTCTTGTGAGCC 60.885 55.000 0.00 0.00 38.73 4.70
2440 2547 1.165907 CGGCAGTTTCTTGTGAGCCA 61.166 55.000 0.00 0.00 42.10 4.75
2441 2548 0.595095 GGCAGTTTCTTGTGAGCCAG 59.405 55.000 0.00 0.00 41.63 4.85
2442 2549 0.595095 GCAGTTTCTTGTGAGCCAGG 59.405 55.000 0.00 0.00 0.00 4.45
2443 2550 0.595095 CAGTTTCTTGTGAGCCAGGC 59.405 55.000 1.84 1.84 0.00 4.85
2444 2551 0.538287 AGTTTCTTGTGAGCCAGGCC 60.538 55.000 8.22 0.00 0.00 5.19
2445 2552 1.600636 TTTCTTGTGAGCCAGGCCG 60.601 57.895 8.22 0.00 0.00 6.13
2446 2553 2.050836 TTTCTTGTGAGCCAGGCCGA 62.051 55.000 8.22 0.00 0.00 5.54
2447 2554 2.435586 CTTGTGAGCCAGGCCGAG 60.436 66.667 8.22 0.00 0.00 4.63
2448 2555 2.922503 TTGTGAGCCAGGCCGAGA 60.923 61.111 8.22 0.00 0.00 4.04
2449 2556 3.240134 TTGTGAGCCAGGCCGAGAC 62.240 63.158 8.22 0.00 0.00 3.36
2450 2557 3.386237 GTGAGCCAGGCCGAGACT 61.386 66.667 8.22 0.00 0.00 3.24
2451 2558 2.052690 GTGAGCCAGGCCGAGACTA 61.053 63.158 8.22 0.00 0.00 2.59
2452 2559 1.754621 TGAGCCAGGCCGAGACTAG 60.755 63.158 8.22 0.00 0.00 2.57
2453 2560 3.145422 GAGCCAGGCCGAGACTAGC 62.145 68.421 8.22 0.00 0.00 3.42
2454 2561 4.577246 GCCAGGCCGAGACTAGCG 62.577 72.222 0.00 0.00 0.00 4.26
2455 2562 2.829003 CCAGGCCGAGACTAGCGA 60.829 66.667 0.00 0.00 0.00 4.93
2456 2563 2.415608 CCAGGCCGAGACTAGCGAA 61.416 63.158 0.00 0.00 0.00 4.70
2457 2564 1.511305 CAGGCCGAGACTAGCGAAA 59.489 57.895 0.00 0.00 0.00 3.46
2458 2565 0.108804 CAGGCCGAGACTAGCGAAAA 60.109 55.000 0.00 0.00 0.00 2.29
2459 2566 0.108756 AGGCCGAGACTAGCGAAAAC 60.109 55.000 0.00 0.00 0.00 2.43
2460 2567 1.411493 GGCCGAGACTAGCGAAAACG 61.411 60.000 0.00 0.00 0.00 3.60
2461 2568 0.455633 GCCGAGACTAGCGAAAACGA 60.456 55.000 0.00 0.00 0.00 3.85
2462 2569 1.536149 CCGAGACTAGCGAAAACGAG 58.464 55.000 0.00 0.00 0.00 4.18
2463 2570 0.908505 CGAGACTAGCGAAAACGAGC 59.091 55.000 0.00 0.00 0.00 5.03
2464 2571 0.908505 GAGACTAGCGAAAACGAGCG 59.091 55.000 0.00 0.00 38.61 5.03
2465 2572 0.456312 AGACTAGCGAAAACGAGCGG 60.456 55.000 0.00 0.00 38.61 5.52
2466 2573 1.411493 GACTAGCGAAAACGAGCGGG 61.411 60.000 0.00 0.00 38.61 6.13
2467 2574 2.799540 CTAGCGAAAACGAGCGGGC 61.800 63.158 0.00 0.00 38.61 6.13
2470 2577 3.047877 CGAAAACGAGCGGGCCTT 61.048 61.111 0.84 0.00 0.00 4.35
2471 2578 2.613506 CGAAAACGAGCGGGCCTTT 61.614 57.895 0.84 0.00 0.00 3.11
2472 2579 1.081442 GAAAACGAGCGGGCCTTTG 60.081 57.895 0.84 0.00 0.00 2.77
2473 2580 3.207547 AAAACGAGCGGGCCTTTGC 62.208 57.895 0.84 4.67 0.00 3.68
2474 2581 4.947147 AACGAGCGGGCCTTTGCA 62.947 61.111 15.67 0.00 40.13 4.08
2475 2582 4.722700 ACGAGCGGGCCTTTGCAT 62.723 61.111 15.67 3.26 40.13 3.96
2476 2583 4.183686 CGAGCGGGCCTTTGCATG 62.184 66.667 15.67 5.43 40.13 4.06
2477 2584 2.751436 GAGCGGGCCTTTGCATGA 60.751 61.111 15.67 0.00 40.13 3.07
2478 2585 2.753043 AGCGGGCCTTTGCATGAG 60.753 61.111 15.67 0.00 40.13 2.90
2479 2586 3.064324 GCGGGCCTTTGCATGAGT 61.064 61.111 0.84 0.00 40.13 3.41
2480 2587 2.879907 CGGGCCTTTGCATGAGTG 59.120 61.111 0.84 0.00 40.13 3.51
2481 2588 1.675310 CGGGCCTTTGCATGAGTGA 60.675 57.895 0.84 0.00 40.13 3.41
2482 2589 1.243342 CGGGCCTTTGCATGAGTGAA 61.243 55.000 0.84 0.00 40.13 3.18
2483 2590 0.529378 GGGCCTTTGCATGAGTGAAG 59.471 55.000 0.84 0.00 40.13 3.02
2484 2591 1.538047 GGCCTTTGCATGAGTGAAGA 58.462 50.000 0.00 0.00 40.13 2.87
2485 2592 2.097825 GGCCTTTGCATGAGTGAAGAT 58.902 47.619 0.00 0.00 40.13 2.40
2486 2593 2.159282 GGCCTTTGCATGAGTGAAGATG 60.159 50.000 0.00 0.00 40.13 2.90
2487 2594 2.159282 GCCTTTGCATGAGTGAAGATGG 60.159 50.000 0.00 0.00 37.47 3.51
2488 2595 3.349927 CCTTTGCATGAGTGAAGATGGA 58.650 45.455 0.00 0.00 0.00 3.41
2489 2596 3.760151 CCTTTGCATGAGTGAAGATGGAA 59.240 43.478 0.00 0.00 0.00 3.53
2490 2597 4.142447 CCTTTGCATGAGTGAAGATGGAAG 60.142 45.833 0.00 0.00 32.36 3.46
2491 2598 2.995283 TGCATGAGTGAAGATGGAAGG 58.005 47.619 0.00 0.00 0.00 3.46
2492 2599 2.295885 GCATGAGTGAAGATGGAAGGG 58.704 52.381 0.00 0.00 0.00 3.95
2493 2600 2.092753 GCATGAGTGAAGATGGAAGGGA 60.093 50.000 0.00 0.00 0.00 4.20
2494 2601 3.434739 GCATGAGTGAAGATGGAAGGGAT 60.435 47.826 0.00 0.00 0.00 3.85
2495 2602 3.920231 TGAGTGAAGATGGAAGGGATG 57.080 47.619 0.00 0.00 0.00 3.51
2496 2603 3.184628 TGAGTGAAGATGGAAGGGATGT 58.815 45.455 0.00 0.00 0.00 3.06
2497 2604 3.054875 TGAGTGAAGATGGAAGGGATGTG 60.055 47.826 0.00 0.00 0.00 3.21
2498 2605 3.184628 AGTGAAGATGGAAGGGATGTGA 58.815 45.455 0.00 0.00 0.00 3.58
2499 2606 3.199508 AGTGAAGATGGAAGGGATGTGAG 59.800 47.826 0.00 0.00 0.00 3.51
2500 2607 2.507058 TGAAGATGGAAGGGATGTGAGG 59.493 50.000 0.00 0.00 0.00 3.86
2501 2608 0.842635 AGATGGAAGGGATGTGAGGC 59.157 55.000 0.00 0.00 0.00 4.70
2502 2609 0.533755 GATGGAAGGGATGTGAGGCG 60.534 60.000 0.00 0.00 0.00 5.52
2503 2610 1.274703 ATGGAAGGGATGTGAGGCGT 61.275 55.000 0.00 0.00 0.00 5.68
2504 2611 1.299976 GGAAGGGATGTGAGGCGTT 59.700 57.895 0.00 0.00 0.00 4.84
2505 2612 0.322546 GGAAGGGATGTGAGGCGTTT 60.323 55.000 0.00 0.00 0.00 3.60
2506 2613 1.065709 GGAAGGGATGTGAGGCGTTTA 60.066 52.381 0.00 0.00 0.00 2.01
2507 2614 2.007608 GAAGGGATGTGAGGCGTTTAC 58.992 52.381 0.00 0.00 0.00 2.01
2508 2615 0.981183 AGGGATGTGAGGCGTTTACA 59.019 50.000 0.88 0.88 0.00 2.41
2509 2616 1.559682 AGGGATGTGAGGCGTTTACAT 59.440 47.619 9.17 9.17 37.72 2.29
2510 2617 1.670811 GGGATGTGAGGCGTTTACATG 59.329 52.381 12.89 0.00 35.35 3.21
2511 2618 1.670811 GGATGTGAGGCGTTTACATGG 59.329 52.381 12.89 0.00 35.35 3.66
2512 2619 2.356135 GATGTGAGGCGTTTACATGGT 58.644 47.619 12.89 0.00 35.35 3.55
2513 2620 1.518325 TGTGAGGCGTTTACATGGTG 58.482 50.000 0.00 0.00 0.00 4.17
2514 2621 1.202710 TGTGAGGCGTTTACATGGTGT 60.203 47.619 0.00 0.00 0.00 4.16
2515 2622 1.463444 GTGAGGCGTTTACATGGTGTC 59.537 52.381 0.00 0.00 0.00 3.67
2516 2623 1.346395 TGAGGCGTTTACATGGTGTCT 59.654 47.619 0.00 0.00 0.00 3.41
2517 2624 2.224426 TGAGGCGTTTACATGGTGTCTT 60.224 45.455 0.00 0.00 0.00 3.01
2518 2625 2.812011 GAGGCGTTTACATGGTGTCTTT 59.188 45.455 0.00 0.00 0.00 2.52
2519 2626 2.812011 AGGCGTTTACATGGTGTCTTTC 59.188 45.455 0.00 0.00 0.00 2.62
2520 2627 2.812011 GGCGTTTACATGGTGTCTTTCT 59.188 45.455 0.00 0.00 0.00 2.52
2521 2628 3.252458 GGCGTTTACATGGTGTCTTTCTT 59.748 43.478 0.00 0.00 0.00 2.52
2522 2629 4.453136 GGCGTTTACATGGTGTCTTTCTTA 59.547 41.667 0.00 0.00 0.00 2.10
2523 2630 5.049267 GGCGTTTACATGGTGTCTTTCTTAA 60.049 40.000 0.00 0.00 0.00 1.85
2524 2631 6.432107 GCGTTTACATGGTGTCTTTCTTAAA 58.568 36.000 0.00 0.00 0.00 1.52
2525 2632 6.358822 GCGTTTACATGGTGTCTTTCTTAAAC 59.641 38.462 0.00 0.00 0.00 2.01
2526 2633 6.854381 CGTTTACATGGTGTCTTTCTTAAACC 59.146 38.462 0.00 0.00 0.00 3.27
2527 2634 7.255001 CGTTTACATGGTGTCTTTCTTAAACCT 60.255 37.037 0.00 0.00 0.00 3.50
2528 2635 7.739498 TTACATGGTGTCTTTCTTAAACCTC 57.261 36.000 0.00 0.00 0.00 3.85
2529 2636 5.070685 ACATGGTGTCTTTCTTAAACCTCC 58.929 41.667 0.00 0.00 0.00 4.30
2530 2637 4.781775 TGGTGTCTTTCTTAAACCTCCA 57.218 40.909 0.00 0.00 0.00 3.86
2531 2638 5.118729 TGGTGTCTTTCTTAAACCTCCAA 57.881 39.130 0.00 0.00 0.00 3.53
2532 2639 5.701224 TGGTGTCTTTCTTAAACCTCCAAT 58.299 37.500 0.00 0.00 0.00 3.16
2533 2640 6.843752 TGGTGTCTTTCTTAAACCTCCAATA 58.156 36.000 0.00 0.00 0.00 1.90
2534 2641 7.291566 TGGTGTCTTTCTTAAACCTCCAATAA 58.708 34.615 0.00 0.00 0.00 1.40
2535 2642 7.447238 TGGTGTCTTTCTTAAACCTCCAATAAG 59.553 37.037 0.00 0.00 0.00 1.73
2536 2643 7.306213 GTGTCTTTCTTAAACCTCCAATAAGC 58.694 38.462 0.00 0.00 0.00 3.09
2537 2644 7.175119 GTGTCTTTCTTAAACCTCCAATAAGCT 59.825 37.037 0.00 0.00 0.00 3.74
2538 2645 7.174946 TGTCTTTCTTAAACCTCCAATAAGCTG 59.825 37.037 0.00 0.00 0.00 4.24
2539 2646 5.897377 TTCTTAAACCTCCAATAAGCTGC 57.103 39.130 0.00 0.00 0.00 5.25
2540 2647 5.179452 TCTTAAACCTCCAATAAGCTGCT 57.821 39.130 0.00 0.00 0.00 4.24
2541 2648 5.186198 TCTTAAACCTCCAATAAGCTGCTC 58.814 41.667 1.00 0.00 0.00 4.26
2542 2649 3.728385 AAACCTCCAATAAGCTGCTCT 57.272 42.857 1.00 0.00 0.00 4.09
2543 2650 2.998316 ACCTCCAATAAGCTGCTCTC 57.002 50.000 1.00 0.00 0.00 3.20
2544 2651 2.476199 ACCTCCAATAAGCTGCTCTCT 58.524 47.619 1.00 0.00 0.00 3.10
2545 2652 3.647636 ACCTCCAATAAGCTGCTCTCTA 58.352 45.455 1.00 0.00 0.00 2.43
2546 2653 4.033709 ACCTCCAATAAGCTGCTCTCTAA 58.966 43.478 1.00 0.00 0.00 2.10
2547 2654 4.657969 ACCTCCAATAAGCTGCTCTCTAAT 59.342 41.667 1.00 0.00 0.00 1.73
2548 2655 5.221621 ACCTCCAATAAGCTGCTCTCTAATC 60.222 44.000 1.00 0.00 0.00 1.75
2549 2656 5.011943 CCTCCAATAAGCTGCTCTCTAATCT 59.988 44.000 1.00 0.00 0.00 2.40
2550 2657 6.464180 CCTCCAATAAGCTGCTCTCTAATCTT 60.464 42.308 1.00 0.00 0.00 2.40
2551 2658 6.520272 TCCAATAAGCTGCTCTCTAATCTTC 58.480 40.000 1.00 0.00 0.00 2.87
2552 2659 6.326064 TCCAATAAGCTGCTCTCTAATCTTCT 59.674 38.462 1.00 0.00 0.00 2.85
2553 2660 6.991531 CCAATAAGCTGCTCTCTAATCTTCTT 59.008 38.462 1.00 0.00 0.00 2.52
2554 2661 7.498570 CCAATAAGCTGCTCTCTAATCTTCTTT 59.501 37.037 1.00 0.00 0.00 2.52
2555 2662 8.550376 CAATAAGCTGCTCTCTAATCTTCTTTC 58.450 37.037 1.00 0.00 0.00 2.62
2556 2663 5.937975 AGCTGCTCTCTAATCTTCTTTCT 57.062 39.130 0.00 0.00 0.00 2.52
2557 2664 6.298441 AGCTGCTCTCTAATCTTCTTTCTT 57.702 37.500 0.00 0.00 0.00 2.52
2558 2665 6.340522 AGCTGCTCTCTAATCTTCTTTCTTC 58.659 40.000 0.00 0.00 0.00 2.87
2559 2666 5.523552 GCTGCTCTCTAATCTTCTTTCTTCC 59.476 44.000 0.00 0.00 0.00 3.46
2560 2667 6.611613 TGCTCTCTAATCTTCTTTCTTCCA 57.388 37.500 0.00 0.00 0.00 3.53
2561 2668 7.192852 TGCTCTCTAATCTTCTTTCTTCCAT 57.807 36.000 0.00 0.00 0.00 3.41
2562 2669 7.046652 TGCTCTCTAATCTTCTTTCTTCCATG 58.953 38.462 0.00 0.00 0.00 3.66
2563 2670 7.047271 GCTCTCTAATCTTCTTTCTTCCATGT 58.953 38.462 0.00 0.00 0.00 3.21
2564 2671 7.552330 GCTCTCTAATCTTCTTTCTTCCATGTT 59.448 37.037 0.00 0.00 0.00 2.71
2565 2672 9.097257 CTCTCTAATCTTCTTTCTTCCATGTTC 57.903 37.037 0.00 0.00 0.00 3.18
2566 2673 8.043710 TCTCTAATCTTCTTTCTTCCATGTTCC 58.956 37.037 0.00 0.00 0.00 3.62
2567 2674 7.922382 TCTAATCTTCTTTCTTCCATGTTCCT 58.078 34.615 0.00 0.00 0.00 3.36
2568 2675 8.043710 TCTAATCTTCTTTCTTCCATGTTCCTC 58.956 37.037 0.00 0.00 0.00 3.71
2569 2676 5.832539 TCTTCTTTCTTCCATGTTCCTCT 57.167 39.130 0.00 0.00 0.00 3.69
2570 2677 5.555017 TCTTCTTTCTTCCATGTTCCTCTG 58.445 41.667 0.00 0.00 0.00 3.35
2571 2678 5.307976 TCTTCTTTCTTCCATGTTCCTCTGA 59.692 40.000 0.00 0.00 0.00 3.27
2572 2679 5.768980 TCTTTCTTCCATGTTCCTCTGAT 57.231 39.130 0.00 0.00 0.00 2.90
2573 2680 5.738909 TCTTTCTTCCATGTTCCTCTGATC 58.261 41.667 0.00 0.00 0.00 2.92
2574 2681 5.486775 TCTTTCTTCCATGTTCCTCTGATCT 59.513 40.000 0.00 0.00 0.00 2.75
2575 2682 6.669591 TCTTTCTTCCATGTTCCTCTGATCTA 59.330 38.462 0.00 0.00 0.00 1.98
2576 2683 5.860941 TCTTCCATGTTCCTCTGATCTAC 57.139 43.478 0.00 0.00 0.00 2.59
2577 2684 5.272402 TCTTCCATGTTCCTCTGATCTACA 58.728 41.667 0.00 0.00 0.00 2.74
2578 2685 5.127845 TCTTCCATGTTCCTCTGATCTACAC 59.872 44.000 0.00 0.00 0.00 2.90
2579 2686 4.352893 TCCATGTTCCTCTGATCTACACA 58.647 43.478 0.00 0.00 0.00 3.72
2580 2687 4.777366 TCCATGTTCCTCTGATCTACACAA 59.223 41.667 0.00 0.00 0.00 3.33
2581 2688 4.872691 CCATGTTCCTCTGATCTACACAAC 59.127 45.833 0.00 0.00 0.00 3.32
2582 2689 4.174411 TGTTCCTCTGATCTACACAACG 57.826 45.455 0.00 0.00 0.00 4.10
2583 2690 3.056821 TGTTCCTCTGATCTACACAACGG 60.057 47.826 0.00 0.00 0.00 4.44
2584 2691 2.803956 TCCTCTGATCTACACAACGGT 58.196 47.619 0.00 0.00 0.00 4.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
294 301 8.303156 GTGACAGATGTGCATAGATAGATAGTT 58.697 37.037 0.00 0.00 0.00 2.24
366 373 4.275936 CCTGGTCAAGTTCAGTGGTTTAAG 59.724 45.833 0.00 0.00 0.00 1.85
442 449 2.034179 AGGTTACTTTTGTTTGCTCGGC 59.966 45.455 0.00 0.00 0.00 5.54
456 463 9.049523 GTAAGTTTAGCAGTTTTGTAGGTTACT 57.950 33.333 0.00 0.00 0.00 2.24
519 527 4.683832 GCACGGTAGATCACTCAGTAATT 58.316 43.478 0.00 0.00 0.00 1.40
602 648 2.434336 AGCTAATCGGGTCAGCATACAA 59.566 45.455 0.00 0.00 37.78 2.41
628 675 4.562789 TCACTAGTTTGCGATCGATTCAAG 59.437 41.667 21.57 10.45 0.00 3.02
642 689 6.882610 TGAAGCAATGACAATCACTAGTTT 57.117 33.333 0.00 0.00 0.00 2.66
661 708 5.100259 GCATGTGAAACCATGAAGATGAAG 58.900 41.667 5.39 0.00 43.99 3.02
662 709 4.523558 TGCATGTGAAACCATGAAGATGAA 59.476 37.500 5.39 0.00 43.99 2.57
663 710 4.080687 TGCATGTGAAACCATGAAGATGA 58.919 39.130 5.39 0.00 43.99 2.92
664 711 4.171005 GTGCATGTGAAACCATGAAGATG 58.829 43.478 5.39 0.00 43.99 2.90
665 712 3.194116 GGTGCATGTGAAACCATGAAGAT 59.806 43.478 5.39 0.00 43.99 2.40
666 713 2.557924 GGTGCATGTGAAACCATGAAGA 59.442 45.455 5.39 0.00 43.99 2.87
784 846 1.001048 CGTACGGTCCACAAACTCTCA 60.001 52.381 7.57 0.00 0.00 3.27
833 905 2.817396 GCACTCCTCTCGCTTGGC 60.817 66.667 0.00 0.00 0.00 4.52
852 924 2.446435 GCCTAGACTTTTCCCATGCAA 58.554 47.619 0.00 0.00 0.00 4.08
901 973 8.971073 CATGTGTGTGTCTATATAGATGGGATA 58.029 37.037 15.43 1.74 34.39 2.59
916 996 1.286880 GCCTTGGCATGTGTGTGTC 59.713 57.895 6.79 0.00 0.00 3.67
928 1008 0.883833 AAATCAGAAGCACGCCTTGG 59.116 50.000 0.00 0.00 32.78 3.61
929 1009 1.401931 CCAAATCAGAAGCACGCCTTG 60.402 52.381 0.00 0.00 32.78 3.61
947 1027 3.370103 GGATCGGTCTGTTGGTTAATCCA 60.370 47.826 0.00 0.00 45.60 3.41
963 1043 1.081892 CAGCTCAACTTGTGGATCGG 58.918 55.000 0.00 0.00 0.00 4.18
964 1044 0.445436 GCAGCTCAACTTGTGGATCG 59.555 55.000 0.00 0.00 0.00 3.69
983 1063 7.386025 TCAACGCCATTGATCTATCTTATTCTG 59.614 37.037 0.00 0.00 42.62 3.02
984 1064 7.445121 TCAACGCCATTGATCTATCTTATTCT 58.555 34.615 0.00 0.00 42.62 2.40
1097 1177 0.036577 CTCCCGCATGATCATCCTCC 60.037 60.000 4.86 0.00 0.00 4.30
1117 1197 1.531149 CACCACCTTGTCGAACATGTC 59.469 52.381 0.00 0.00 0.00 3.06
1474 1557 2.583441 CCACTGGAACGAGGAGGCA 61.583 63.158 0.00 0.00 0.00 4.75
1514 1618 2.829384 GGTGCCCTGTCTTGGTCCA 61.829 63.158 0.00 0.00 0.00 4.02
1645 1749 4.693566 TCCCGAACACTACATGAATTCAAC 59.306 41.667 13.09 0.00 0.00 3.18
1667 1771 4.712763 CAGCTGTTCTAAAAATCCACGTC 58.287 43.478 5.25 0.00 0.00 4.34
1668 1772 3.058224 GCAGCTGTTCTAAAAATCCACGT 60.058 43.478 16.64 0.00 0.00 4.49
1669 1773 3.058293 TGCAGCTGTTCTAAAAATCCACG 60.058 43.478 16.64 0.00 0.00 4.94
1670 1774 4.229876 GTGCAGCTGTTCTAAAAATCCAC 58.770 43.478 16.64 6.27 0.00 4.02
1671 1775 3.255642 GGTGCAGCTGTTCTAAAAATCCA 59.744 43.478 16.64 0.00 0.00 3.41
1672 1776 3.367395 GGGTGCAGCTGTTCTAAAAATCC 60.367 47.826 16.64 3.45 0.00 3.01
1673 1777 3.367395 GGGGTGCAGCTGTTCTAAAAATC 60.367 47.826 16.64 0.00 0.00 2.17
1674 1778 2.562738 GGGGTGCAGCTGTTCTAAAAAT 59.437 45.455 16.64 0.00 0.00 1.82
1675 1779 1.960689 GGGGTGCAGCTGTTCTAAAAA 59.039 47.619 16.64 0.00 0.00 1.94
1676 1780 1.616159 GGGGTGCAGCTGTTCTAAAA 58.384 50.000 16.64 0.00 0.00 1.52
1677 1781 0.605319 CGGGGTGCAGCTGTTCTAAA 60.605 55.000 16.64 0.00 0.00 1.85
1678 1782 1.003839 CGGGGTGCAGCTGTTCTAA 60.004 57.895 16.64 0.00 0.00 2.10
1679 1783 2.662596 CGGGGTGCAGCTGTTCTA 59.337 61.111 16.64 0.00 0.00 2.10
1680 1784 4.335647 CCGGGGTGCAGCTGTTCT 62.336 66.667 16.64 0.00 0.00 3.01
1689 1793 4.123545 ATACAAGGGCCGGGGTGC 62.124 66.667 2.18 0.00 0.00 5.01
1690 1794 2.192175 GATACAAGGGCCGGGGTG 59.808 66.667 2.18 0.00 0.00 4.61
1691 1795 3.094498 GGATACAAGGGCCGGGGT 61.094 66.667 2.18 0.00 0.00 4.95
1692 1796 2.772622 AGGATACAAGGGCCGGGG 60.773 66.667 2.18 0.00 41.41 5.73
1693 1797 2.510906 CAGGATACAAGGGCCGGG 59.489 66.667 2.18 0.00 41.41 5.73
1694 1798 1.921869 AACCAGGATACAAGGGCCGG 61.922 60.000 0.00 0.00 38.25 6.13
1695 1799 0.748005 CAACCAGGATACAAGGGCCG 60.748 60.000 0.00 0.00 38.25 6.13
1696 1800 0.331616 ACAACCAGGATACAAGGGCC 59.668 55.000 0.00 0.00 38.25 5.80
1697 1801 1.682087 GGACAACCAGGATACAAGGGC 60.682 57.143 0.00 0.00 38.25 5.19
1698 1802 1.633432 TGGACAACCAGGATACAAGGG 59.367 52.381 0.00 0.00 41.77 3.95
1709 1813 7.615365 AGATCTTAAAGCAATATTGGACAACCA 59.385 33.333 17.02 0.00 45.34 3.67
1710 1814 7.917505 CAGATCTTAAAGCAATATTGGACAACC 59.082 37.037 17.02 0.00 0.00 3.77
1711 1815 8.462016 ACAGATCTTAAAGCAATATTGGACAAC 58.538 33.333 17.02 0.00 0.00 3.32
1712 1816 8.461222 CACAGATCTTAAAGCAATATTGGACAA 58.539 33.333 17.02 0.00 0.00 3.18
1713 1817 7.415541 GCACAGATCTTAAAGCAATATTGGACA 60.416 37.037 17.02 0.00 0.00 4.02
1714 1818 6.914757 GCACAGATCTTAAAGCAATATTGGAC 59.085 38.462 17.02 1.44 0.00 4.02
1715 1819 6.602803 TGCACAGATCTTAAAGCAATATTGGA 59.397 34.615 17.02 5.09 0.00 3.53
1716 1820 6.798482 TGCACAGATCTTAAAGCAATATTGG 58.202 36.000 17.02 0.00 0.00 3.16
1717 1821 7.756272 TGTTGCACAGATCTTAAAGCAATATTG 59.244 33.333 18.21 11.27 42.90 1.90
1718 1822 7.756722 GTGTTGCACAGATCTTAAAGCAATATT 59.243 33.333 18.21 0.00 42.90 1.28
1719 1823 7.094248 TGTGTTGCACAGATCTTAAAGCAATAT 60.094 33.333 18.21 0.00 42.90 1.28
1720 1824 6.206438 TGTGTTGCACAGATCTTAAAGCAATA 59.794 34.615 18.21 14.67 42.90 1.90
1721 1825 5.009911 TGTGTTGCACAGATCTTAAAGCAAT 59.990 36.000 18.21 0.00 42.90 3.56
1722 1826 4.337836 TGTGTTGCACAGATCTTAAAGCAA 59.662 37.500 13.71 13.71 39.62 3.91
1723 1827 3.882288 TGTGTTGCACAGATCTTAAAGCA 59.118 39.130 0.00 0.00 39.62 3.91
1724 1828 4.488126 TGTGTTGCACAGATCTTAAAGC 57.512 40.909 0.00 0.00 39.62 3.51
1725 1829 6.064846 AGTTGTGTTGCACAGATCTTAAAG 57.935 37.500 0.00 0.00 45.39 1.85
1726 1830 7.282224 AGTTAGTTGTGTTGCACAGATCTTAAA 59.718 33.333 0.00 0.00 45.39 1.52
1727 1831 6.765989 AGTTAGTTGTGTTGCACAGATCTTAA 59.234 34.615 0.00 0.00 45.39 1.85
1728 1832 6.288294 AGTTAGTTGTGTTGCACAGATCTTA 58.712 36.000 0.00 0.00 45.39 2.10
1729 1833 5.126067 AGTTAGTTGTGTTGCACAGATCTT 58.874 37.500 0.00 0.00 45.39 2.40
1730 1834 4.708177 AGTTAGTTGTGTTGCACAGATCT 58.292 39.130 2.17 0.00 45.39 2.75
1731 1835 5.424121 AAGTTAGTTGTGTTGCACAGATC 57.576 39.130 2.17 0.00 45.39 2.75
1732 1836 5.835113 AAAGTTAGTTGTGTTGCACAGAT 57.165 34.783 2.17 0.00 45.39 2.90
1733 1837 5.636837 GAAAAGTTAGTTGTGTTGCACAGA 58.363 37.500 2.17 0.00 45.39 3.41
1734 1838 4.495472 CGAAAAGTTAGTTGTGTTGCACAG 59.505 41.667 2.17 0.00 45.39 3.66
1735 1839 4.083217 ACGAAAAGTTAGTTGTGTTGCACA 60.083 37.500 0.00 0.00 43.02 4.57
1736 1840 4.408694 ACGAAAAGTTAGTTGTGTTGCAC 58.591 39.130 0.00 0.00 34.56 4.57
1737 1841 4.688511 ACGAAAAGTTAGTTGTGTTGCA 57.311 36.364 0.00 0.00 0.00 4.08
1738 1842 6.423862 TCATACGAAAAGTTAGTTGTGTTGC 58.576 36.000 0.00 0.00 0.00 4.17
1739 1843 8.829514 TTTCATACGAAAAGTTAGTTGTGTTG 57.170 30.769 0.00 0.00 38.19 3.33
1774 1878 9.950680 GACATCTTTTATGTGAGAGAAACAAAA 57.049 29.630 0.00 0.00 31.52 2.44
1775 1879 9.342308 AGACATCTTTTATGTGAGAGAAACAAA 57.658 29.630 0.00 0.00 31.52 2.83
1776 1880 8.908786 AGACATCTTTTATGTGAGAGAAACAA 57.091 30.769 0.00 0.00 31.52 2.83
1777 1881 8.777413 CAAGACATCTTTTATGTGAGAGAAACA 58.223 33.333 0.00 0.00 33.11 2.83
1778 1882 8.993121 TCAAGACATCTTTTATGTGAGAGAAAC 58.007 33.333 0.00 0.00 33.11 2.78
1779 1883 9.559732 TTCAAGACATCTTTTATGTGAGAGAAA 57.440 29.630 0.00 0.00 33.11 2.52
1780 1884 8.993121 GTTCAAGACATCTTTTATGTGAGAGAA 58.007 33.333 0.00 0.00 33.11 2.87
1781 1885 8.370940 AGTTCAAGACATCTTTTATGTGAGAGA 58.629 33.333 0.00 0.00 33.11 3.10
1782 1886 8.545229 AGTTCAAGACATCTTTTATGTGAGAG 57.455 34.615 0.00 0.00 33.11 3.20
1783 1887 8.908786 AAGTTCAAGACATCTTTTATGTGAGA 57.091 30.769 0.00 0.00 33.11 3.27
1784 1888 8.777413 TGAAGTTCAAGACATCTTTTATGTGAG 58.223 33.333 2.20 0.00 33.11 3.51
1785 1889 8.675705 TGAAGTTCAAGACATCTTTTATGTGA 57.324 30.769 2.20 0.00 33.11 3.58
1786 1890 9.734620 TTTGAAGTTCAAGACATCTTTTATGTG 57.265 29.630 17.36 0.00 37.70 3.21
1787 1891 9.736023 GTTTGAAGTTCAAGACATCTTTTATGT 57.264 29.630 17.36 0.00 37.70 2.29
1788 1892 9.185192 GGTTTGAAGTTCAAGACATCTTTTATG 57.815 33.333 17.36 0.00 37.70 1.90
1789 1893 9.136323 AGGTTTGAAGTTCAAGACATCTTTTAT 57.864 29.630 17.36 0.00 37.70 1.40
1790 1894 8.519799 AGGTTTGAAGTTCAAGACATCTTTTA 57.480 30.769 17.36 0.00 37.70 1.52
1791 1895 7.410120 AGGTTTGAAGTTCAAGACATCTTTT 57.590 32.000 17.36 0.00 37.70 2.27
1792 1896 7.410120 AAGGTTTGAAGTTCAAGACATCTTT 57.590 32.000 17.36 7.90 37.70 2.52
1793 1897 7.260603 CAAAGGTTTGAAGTTCAAGACATCTT 58.739 34.615 17.36 12.26 40.55 2.40
1794 1898 6.681368 GCAAAGGTTTGAAGTTCAAGACATCT 60.681 38.462 17.36 7.02 40.55 2.90
1795 1899 5.460091 GCAAAGGTTTGAAGTTCAAGACATC 59.540 40.000 17.36 4.83 40.55 3.06
1796 1900 5.105392 TGCAAAGGTTTGAAGTTCAAGACAT 60.105 36.000 17.36 13.27 40.55 3.06
1797 1901 4.219507 TGCAAAGGTTTGAAGTTCAAGACA 59.780 37.500 17.36 1.52 40.55 3.41
1798 1902 4.743493 TGCAAAGGTTTGAAGTTCAAGAC 58.257 39.130 17.36 16.71 40.55 3.01
1799 1903 4.677779 GCTGCAAAGGTTTGAAGTTCAAGA 60.678 41.667 17.36 7.27 44.19 3.02
1800 1904 3.553105 GCTGCAAAGGTTTGAAGTTCAAG 59.447 43.478 17.36 7.09 44.19 3.02
1801 1905 3.520569 GCTGCAAAGGTTTGAAGTTCAA 58.479 40.909 14.35 14.35 44.19 2.69
1802 1906 2.479389 CGCTGCAAAGGTTTGAAGTTCA 60.479 45.455 11.37 0.08 44.19 3.18
1803 1907 2.119457 CGCTGCAAAGGTTTGAAGTTC 58.881 47.619 11.37 0.00 44.19 3.01
1804 1908 1.476488 ACGCTGCAAAGGTTTGAAGTT 59.524 42.857 11.37 0.00 44.19 2.66
1805 1909 1.102978 ACGCTGCAAAGGTTTGAAGT 58.897 45.000 11.37 1.01 44.19 3.01
1806 1910 1.480205 CACGCTGCAAAGGTTTGAAG 58.520 50.000 6.63 6.36 44.97 3.02
1807 1911 0.102120 CCACGCTGCAAAGGTTTGAA 59.898 50.000 6.63 0.00 40.55 2.69
1808 1912 1.732917 CCACGCTGCAAAGGTTTGA 59.267 52.632 6.63 0.00 40.55 2.69
1809 1913 1.950630 GCCACGCTGCAAAGGTTTG 60.951 57.895 0.00 0.00 41.03 2.93
1810 1914 2.417097 GCCACGCTGCAAAGGTTT 59.583 55.556 0.00 0.00 0.00 3.27
1811 1915 2.832661 TGCCACGCTGCAAAGGTT 60.833 55.556 0.00 0.00 38.56 3.50
1817 1921 2.682256 GAAAGCTTTGCCACGCTGCA 62.682 55.000 18.30 0.00 40.07 4.41
1818 1922 2.018324 GAAAGCTTTGCCACGCTGC 61.018 57.895 18.30 0.00 36.45 5.25
1819 1923 1.372128 GGAAAGCTTTGCCACGCTG 60.372 57.895 18.30 0.00 36.45 5.18
1820 1924 1.181098 ATGGAAAGCTTTGCCACGCT 61.181 50.000 25.53 11.04 38.30 5.07
1821 1925 0.733909 GATGGAAAGCTTTGCCACGC 60.734 55.000 25.53 17.52 33.93 5.34
1822 1926 0.883833 AGATGGAAAGCTTTGCCACG 59.116 50.000 25.53 0.00 33.93 4.94
1823 1927 3.347216 TCTAGATGGAAAGCTTTGCCAC 58.653 45.455 25.53 18.80 33.93 5.01
1824 1928 3.719268 TCTAGATGGAAAGCTTTGCCA 57.281 42.857 25.53 24.47 35.91 4.92
1825 1929 4.886489 AGATTCTAGATGGAAAGCTTTGCC 59.114 41.667 25.53 20.40 0.00 4.52
1826 1930 6.204495 CCTAGATTCTAGATGGAAAGCTTTGC 59.796 42.308 22.47 22.47 0.00 3.68
1827 1931 7.504403 TCCTAGATTCTAGATGGAAAGCTTTG 58.496 38.462 18.30 0.00 0.00 2.77
1828 1932 7.682787 TCCTAGATTCTAGATGGAAAGCTTT 57.317 36.000 20.14 12.53 0.00 3.51
1829 1933 7.870426 ATCCTAGATTCTAGATGGAAAGCTT 57.130 36.000 20.14 0.00 0.00 3.74
1830 1934 8.964533 TTATCCTAGATTCTAGATGGAAAGCT 57.035 34.615 20.14 0.80 0.00 3.74
1966 2070 9.522804 CGTAGCAAAGTTTTCTATCTAGAATCT 57.477 33.333 0.00 0.00 41.52 2.40
1987 2091 0.591170 TCAAACCTTTGCAGCGTAGC 59.409 50.000 0.00 0.00 46.28 3.58
1988 2092 2.290641 AGTTCAAACCTTTGCAGCGTAG 59.709 45.455 0.00 0.00 38.05 3.51
1989 2093 2.294074 AGTTCAAACCTTTGCAGCGTA 58.706 42.857 0.00 0.00 38.05 4.42
1990 2094 1.102978 AGTTCAAACCTTTGCAGCGT 58.897 45.000 0.00 0.00 38.05 5.07
1991 2095 2.119457 GAAGTTCAAACCTTTGCAGCG 58.881 47.619 0.00 0.00 38.05 5.18
1992 2096 3.163630 TGAAGTTCAAACCTTTGCAGC 57.836 42.857 2.20 0.00 38.05 5.25
1993 2097 6.667007 ATTTTGAAGTTCAAACCTTTGCAG 57.333 33.333 26.72 0.00 45.03 4.41
1994 2098 7.768120 ACATATTTTGAAGTTCAAACCTTTGCA 59.232 29.630 26.72 13.39 45.03 4.08
1995 2099 8.141835 ACATATTTTGAAGTTCAAACCTTTGC 57.858 30.769 26.72 0.00 45.03 3.68
2050 2154 0.179225 ATCGCGATTCGTGCAAACAC 60.179 50.000 17.62 0.00 43.76 3.32
2051 2155 0.179227 CATCGCGATTCGTGCAAACA 60.179 50.000 21.14 0.00 37.28 2.83
2052 2156 1.455908 GCATCGCGATTCGTGCAAAC 61.456 55.000 23.50 1.07 41.45 2.93
2053 2157 1.225991 GCATCGCGATTCGTGCAAA 60.226 52.632 23.50 0.00 41.45 3.68
2054 2158 2.399217 GCATCGCGATTCGTGCAA 59.601 55.556 23.50 0.00 41.45 4.08
2066 2170 1.572941 CCATCCATTCTGCGCATCG 59.427 57.895 12.24 0.00 0.00 3.84
2067 2171 1.170919 AGCCATCCATTCTGCGCATC 61.171 55.000 12.24 0.00 0.00 3.91
2068 2172 0.109153 TAGCCATCCATTCTGCGCAT 59.891 50.000 12.24 0.00 0.00 4.73
2069 2173 0.533531 CTAGCCATCCATTCTGCGCA 60.534 55.000 10.98 10.98 0.00 6.09
2070 2174 0.250038 TCTAGCCATCCATTCTGCGC 60.250 55.000 0.00 0.00 0.00 6.09
2071 2175 2.469274 ATCTAGCCATCCATTCTGCG 57.531 50.000 0.00 0.00 0.00 5.18
2072 2176 4.465660 TCTCTATCTAGCCATCCATTCTGC 59.534 45.833 0.00 0.00 0.00 4.26
2073 2177 5.127519 CCTCTCTATCTAGCCATCCATTCTG 59.872 48.000 0.00 0.00 0.00 3.02
2074 2178 5.271598 CCTCTCTATCTAGCCATCCATTCT 58.728 45.833 0.00 0.00 0.00 2.40
2075 2179 4.405358 CCCTCTCTATCTAGCCATCCATTC 59.595 50.000 0.00 0.00 0.00 2.67
2076 2180 4.360889 CCCTCTCTATCTAGCCATCCATT 58.639 47.826 0.00 0.00 0.00 3.16
2077 2181 3.885333 GCCCTCTCTATCTAGCCATCCAT 60.885 52.174 0.00 0.00 0.00 3.41
2078 2182 2.558575 GCCCTCTCTATCTAGCCATCCA 60.559 54.545 0.00 0.00 0.00 3.41
2079 2183 2.107366 GCCCTCTCTATCTAGCCATCC 58.893 57.143 0.00 0.00 0.00 3.51
2080 2184 2.107366 GGCCCTCTCTATCTAGCCATC 58.893 57.143 0.00 0.00 40.20 3.51
2081 2185 1.273552 GGGCCCTCTCTATCTAGCCAT 60.274 57.143 17.04 0.00 42.29 4.40
2082 2186 0.115349 GGGCCCTCTCTATCTAGCCA 59.885 60.000 17.04 0.00 42.29 4.75
2083 2187 0.968393 CGGGCCCTCTCTATCTAGCC 60.968 65.000 22.43 0.00 39.73 3.93
2084 2188 0.968393 CCGGGCCCTCTCTATCTAGC 60.968 65.000 22.43 0.00 0.00 3.42
2085 2189 0.323908 CCCGGGCCCTCTCTATCTAG 60.324 65.000 22.43 0.00 0.00 2.43
2086 2190 1.072505 ACCCGGGCCCTCTCTATCTA 61.073 60.000 24.08 0.00 0.00 1.98
2087 2191 2.404750 ACCCGGGCCCTCTCTATCT 61.405 63.158 24.08 0.00 0.00 1.98
2088 2192 2.201771 ACCCGGGCCCTCTCTATC 59.798 66.667 24.08 0.00 0.00 2.08
2089 2193 2.122813 CACCCGGGCCCTCTCTAT 60.123 66.667 24.08 0.00 0.00 1.98
2100 2204 3.687321 ATAGCACAGCTGCACCCGG 62.687 63.158 15.27 0.00 46.97 5.73
2101 2205 1.308069 AAATAGCACAGCTGCACCCG 61.308 55.000 15.27 0.00 46.97 5.28
2102 2206 0.890683 AAAATAGCACAGCTGCACCC 59.109 50.000 15.27 0.00 46.97 4.61
2103 2207 5.695851 ATATAAAATAGCACAGCTGCACC 57.304 39.130 15.27 1.79 46.97 5.01
2104 2208 7.096885 CGAAAATATAAAATAGCACAGCTGCAC 60.097 37.037 15.27 5.98 46.97 4.57
2105 2209 6.912051 CGAAAATATAAAATAGCACAGCTGCA 59.088 34.615 15.27 0.00 46.97 4.41
2106 2210 6.360681 CCGAAAATATAAAATAGCACAGCTGC 59.639 38.462 15.27 0.57 44.63 5.25
2107 2211 7.417612 ACCGAAAATATAAAATAGCACAGCTG 58.582 34.615 13.48 13.48 40.10 4.24
2108 2212 7.568199 ACCGAAAATATAAAATAGCACAGCT 57.432 32.000 0.00 0.00 43.41 4.24
2109 2213 8.557029 ACTACCGAAAATATAAAATAGCACAGC 58.443 33.333 0.00 0.00 0.00 4.40
2110 2214 9.864034 CACTACCGAAAATATAAAATAGCACAG 57.136 33.333 0.00 0.00 0.00 3.66
2111 2215 9.386010 ACACTACCGAAAATATAAAATAGCACA 57.614 29.630 0.00 0.00 0.00 4.57
2114 2218 9.577003 CGAACACTACCGAAAATATAAAATAGC 57.423 33.333 0.00 0.00 0.00 2.97
2117 2221 9.374838 AGTCGAACACTACCGAAAATATAAAAT 57.625 29.630 0.00 0.00 36.50 1.82
2118 2222 8.649841 CAGTCGAACACTACCGAAAATATAAAA 58.350 33.333 0.00 0.00 36.50 1.52
2119 2223 7.814107 ACAGTCGAACACTACCGAAAATATAAA 59.186 33.333 0.00 0.00 36.50 1.40
2120 2224 7.315142 ACAGTCGAACACTACCGAAAATATAA 58.685 34.615 0.00 0.00 36.50 0.98
2121 2225 6.855836 ACAGTCGAACACTACCGAAAATATA 58.144 36.000 0.00 0.00 36.50 0.86
2122 2226 5.717119 ACAGTCGAACACTACCGAAAATAT 58.283 37.500 0.00 0.00 36.50 1.28
2123 2227 5.125100 ACAGTCGAACACTACCGAAAATA 57.875 39.130 0.00 0.00 36.50 1.40
2124 2228 3.986277 ACAGTCGAACACTACCGAAAAT 58.014 40.909 0.00 0.00 36.50 1.82
2125 2229 3.441496 ACAGTCGAACACTACCGAAAA 57.559 42.857 0.00 0.00 36.50 2.29
2126 2230 3.374745 GAACAGTCGAACACTACCGAAA 58.625 45.455 0.00 0.00 36.50 3.46
2127 2231 3.004024 GAACAGTCGAACACTACCGAA 57.996 47.619 0.00 0.00 36.50 4.30
2128 2232 2.693797 GAACAGTCGAACACTACCGA 57.306 50.000 0.00 0.00 32.21 4.69
2139 2243 7.975474 TTGAGATTGTCATTGACGAACAGTCG 61.975 42.308 10.73 0.00 43.30 4.18
2140 2244 5.177511 TTGAGATTGTCATTGACGAACAGTC 59.822 40.000 10.73 4.37 41.85 3.51
2141 2245 4.631131 TGAGATTGTCATTGACGAACAGT 58.369 39.130 10.73 0.00 34.95 3.55
2142 2246 5.596268 TTGAGATTGTCATTGACGAACAG 57.404 39.130 10.73 0.00 34.17 3.16
2143 2247 6.558771 ATTTGAGATTGTCATTGACGAACA 57.441 33.333 10.73 8.75 34.17 3.18
2144 2248 8.230486 AGTAATTTGAGATTGTCATTGACGAAC 58.770 33.333 10.73 8.35 34.17 3.95
2145 2249 8.322906 AGTAATTTGAGATTGTCATTGACGAA 57.677 30.769 10.73 7.34 34.17 3.85
2146 2250 7.905604 AGTAATTTGAGATTGTCATTGACGA 57.094 32.000 9.16 9.16 34.17 4.20
2147 2251 8.873830 ACTAGTAATTTGAGATTGTCATTGACG 58.126 33.333 11.97 0.00 34.17 4.35
2214 2321 4.669318 GTCGTCGATGGAACTTGAGATTA 58.331 43.478 4.48 0.00 0.00 1.75
2313 2420 1.463214 TGGGGCAAGACCAAGGAGA 60.463 57.895 0.00 0.00 42.05 3.71
2345 2452 1.538047 AGCCCAACAGTGTATGCAAG 58.462 50.000 12.41 0.00 0.00 4.01
2346 2453 1.612950 CAAGCCCAACAGTGTATGCAA 59.387 47.619 12.41 0.00 0.00 4.08
2347 2454 1.246649 CAAGCCCAACAGTGTATGCA 58.753 50.000 12.41 0.00 0.00 3.96
2348 2455 1.247567 ACAAGCCCAACAGTGTATGC 58.752 50.000 0.00 0.00 0.00 3.14
2349 2456 4.273480 GCTATACAAGCCCAACAGTGTATG 59.727 45.833 0.00 0.00 46.25 2.39
2350 2457 4.451900 GCTATACAAGCCCAACAGTGTAT 58.548 43.478 0.00 0.00 46.25 2.29
2351 2458 3.869065 GCTATACAAGCCCAACAGTGTA 58.131 45.455 0.00 0.00 46.25 2.90
2352 2459 2.711542 GCTATACAAGCCCAACAGTGT 58.288 47.619 0.00 0.00 46.25 3.55
2368 2475 8.621286 CCAGAGGTATTTTAAATTTCGTGCTAT 58.379 33.333 0.00 0.00 0.00 2.97
2369 2476 7.066525 CCCAGAGGTATTTTAAATTTCGTGCTA 59.933 37.037 0.00 0.00 0.00 3.49
2370 2477 6.127730 CCCAGAGGTATTTTAAATTTCGTGCT 60.128 38.462 0.00 0.00 0.00 4.40
2371 2478 6.033966 CCCAGAGGTATTTTAAATTTCGTGC 58.966 40.000 0.00 0.00 0.00 5.34
2372 2479 6.033966 GCCCAGAGGTATTTTAAATTTCGTG 58.966 40.000 0.00 0.00 34.57 4.35
2373 2480 5.126545 GGCCCAGAGGTATTTTAAATTTCGT 59.873 40.000 0.00 0.00 34.57 3.85
2374 2481 5.359860 AGGCCCAGAGGTATTTTAAATTTCG 59.640 40.000 0.00 0.00 34.57 3.46
2375 2482 6.379988 TCAGGCCCAGAGGTATTTTAAATTTC 59.620 38.462 0.00 0.00 34.57 2.17
2376 2483 6.154534 GTCAGGCCCAGAGGTATTTTAAATTT 59.845 38.462 0.00 0.00 34.57 1.82
2377 2484 5.656859 GTCAGGCCCAGAGGTATTTTAAATT 59.343 40.000 0.00 0.00 34.57 1.82
2378 2485 5.044105 AGTCAGGCCCAGAGGTATTTTAAAT 60.044 40.000 0.00 0.00 34.57 1.40
2379 2486 4.291249 AGTCAGGCCCAGAGGTATTTTAAA 59.709 41.667 0.00 0.00 34.57 1.52
2380 2487 3.850173 AGTCAGGCCCAGAGGTATTTTAA 59.150 43.478 0.00 0.00 34.57 1.52
2381 2488 3.460825 AGTCAGGCCCAGAGGTATTTTA 58.539 45.455 0.00 0.00 34.57 1.52
2382 2489 2.279173 AGTCAGGCCCAGAGGTATTTT 58.721 47.619 0.00 0.00 34.57 1.82
2383 2490 1.972588 AGTCAGGCCCAGAGGTATTT 58.027 50.000 0.00 0.00 34.57 1.40
2384 2491 1.561542 CAAGTCAGGCCCAGAGGTATT 59.438 52.381 0.00 0.00 34.57 1.89
2385 2492 1.207791 CAAGTCAGGCCCAGAGGTAT 58.792 55.000 0.00 0.00 34.57 2.73
2386 2493 1.553690 GCAAGTCAGGCCCAGAGGTA 61.554 60.000 0.00 0.00 34.57 3.08
2387 2494 2.900106 GCAAGTCAGGCCCAGAGGT 61.900 63.158 0.00 0.00 34.57 3.85
2388 2495 2.045536 GCAAGTCAGGCCCAGAGG 60.046 66.667 0.00 0.00 0.00 3.69
2389 2496 1.376942 CAGCAAGTCAGGCCCAGAG 60.377 63.158 0.00 0.00 0.00 3.35
2390 2497 1.418097 TTCAGCAAGTCAGGCCCAGA 61.418 55.000 0.00 0.00 0.00 3.86
2391 2498 0.538057 TTTCAGCAAGTCAGGCCCAG 60.538 55.000 0.00 0.00 0.00 4.45
2392 2499 0.106268 TTTTCAGCAAGTCAGGCCCA 60.106 50.000 0.00 0.00 0.00 5.36
2393 2500 0.315251 GTTTTCAGCAAGTCAGGCCC 59.685 55.000 0.00 0.00 0.00 5.80
2394 2501 0.040067 CGTTTTCAGCAAGTCAGGCC 60.040 55.000 0.00 0.00 0.00 5.19
2395 2502 0.663153 ACGTTTTCAGCAAGTCAGGC 59.337 50.000 0.00 0.00 0.00 4.85
2396 2503 2.354510 TGAACGTTTTCAGCAAGTCAGG 59.645 45.455 0.46 0.00 36.79 3.86
2397 2504 3.673746 TGAACGTTTTCAGCAAGTCAG 57.326 42.857 0.46 0.00 36.79 3.51
2406 2513 1.798223 CTGCCGATCTGAACGTTTTCA 59.202 47.619 0.46 0.00 39.55 2.69
2407 2514 1.798813 ACTGCCGATCTGAACGTTTTC 59.201 47.619 0.46 0.00 0.00 2.29
2408 2515 1.878953 ACTGCCGATCTGAACGTTTT 58.121 45.000 0.46 0.00 0.00 2.43
2409 2516 1.878953 AACTGCCGATCTGAACGTTT 58.121 45.000 0.46 0.00 0.00 3.60
2410 2517 1.798813 GAAACTGCCGATCTGAACGTT 59.201 47.619 0.00 0.00 0.00 3.99
2411 2518 1.000955 AGAAACTGCCGATCTGAACGT 59.999 47.619 6.58 0.00 0.00 3.99
2412 2519 1.714794 AGAAACTGCCGATCTGAACG 58.285 50.000 0.00 0.00 0.00 3.95
2413 2520 2.808543 ACAAGAAACTGCCGATCTGAAC 59.191 45.455 0.00 0.00 0.00 3.18
2414 2521 2.807967 CACAAGAAACTGCCGATCTGAA 59.192 45.455 0.00 0.00 0.00 3.02
2415 2522 2.037121 TCACAAGAAACTGCCGATCTGA 59.963 45.455 0.00 0.00 0.00 3.27
2416 2523 2.414481 CTCACAAGAAACTGCCGATCTG 59.586 50.000 0.00 0.00 0.00 2.90
2417 2524 2.693069 CTCACAAGAAACTGCCGATCT 58.307 47.619 0.00 0.00 0.00 2.75
2418 2525 1.129437 GCTCACAAGAAACTGCCGATC 59.871 52.381 0.00 0.00 0.00 3.69
2419 2526 1.160137 GCTCACAAGAAACTGCCGAT 58.840 50.000 0.00 0.00 0.00 4.18
2420 2527 0.884704 GGCTCACAAGAAACTGCCGA 60.885 55.000 0.00 0.00 0.00 5.54
2421 2528 1.165907 TGGCTCACAAGAAACTGCCG 61.166 55.000 0.00 0.00 42.87 5.69
2422 2529 0.595095 CTGGCTCACAAGAAACTGCC 59.405 55.000 0.00 0.00 40.62 4.85
2423 2530 0.595095 CCTGGCTCACAAGAAACTGC 59.405 55.000 0.00 0.00 0.00 4.40
2424 2531 0.595095 GCCTGGCTCACAAGAAACTG 59.405 55.000 12.43 0.00 0.00 3.16
2425 2532 0.538287 GGCCTGGCTCACAAGAAACT 60.538 55.000 19.68 0.00 0.00 2.66
2426 2533 1.856265 CGGCCTGGCTCACAAGAAAC 61.856 60.000 19.68 0.00 0.00 2.78
2427 2534 1.600636 CGGCCTGGCTCACAAGAAA 60.601 57.895 19.68 0.00 0.00 2.52
2428 2535 2.032528 CGGCCTGGCTCACAAGAA 59.967 61.111 19.68 0.00 0.00 2.52
2429 2536 2.922503 TCGGCCTGGCTCACAAGA 60.923 61.111 19.68 6.08 0.00 3.02
2430 2537 2.435586 CTCGGCCTGGCTCACAAG 60.436 66.667 19.68 5.39 0.00 3.16
2431 2538 2.922503 TCTCGGCCTGGCTCACAA 60.923 61.111 19.68 0.00 0.00 3.33
2432 2539 2.781431 TAGTCTCGGCCTGGCTCACA 62.781 60.000 19.68 0.00 0.00 3.58
2433 2540 2.010582 CTAGTCTCGGCCTGGCTCAC 62.011 65.000 19.68 9.84 0.00 3.51
2434 2541 1.754621 CTAGTCTCGGCCTGGCTCA 60.755 63.158 19.68 4.22 0.00 4.26
2435 2542 3.124686 CTAGTCTCGGCCTGGCTC 58.875 66.667 19.68 7.86 0.00 4.70
2436 2543 3.151022 GCTAGTCTCGGCCTGGCT 61.151 66.667 19.68 2.67 34.01 4.75
2437 2544 4.577246 CGCTAGTCTCGGCCTGGC 62.577 72.222 11.05 11.05 33.53 4.85
2438 2545 1.945354 TTTCGCTAGTCTCGGCCTGG 61.945 60.000 0.00 0.00 0.00 4.45
2439 2546 0.108804 TTTTCGCTAGTCTCGGCCTG 60.109 55.000 0.00 0.00 0.00 4.85
2440 2547 0.108756 GTTTTCGCTAGTCTCGGCCT 60.109 55.000 0.00 0.00 0.00 5.19
2441 2548 1.411493 CGTTTTCGCTAGTCTCGGCC 61.411 60.000 0.00 0.00 36.22 6.13
2442 2549 0.455633 TCGTTTTCGCTAGTCTCGGC 60.456 55.000 0.00 0.00 43.73 5.54
2443 2550 1.536149 CTCGTTTTCGCTAGTCTCGG 58.464 55.000 0.00 0.00 43.73 4.63
2444 2551 0.908505 GCTCGTTTTCGCTAGTCTCG 59.091 55.000 0.00 0.00 43.73 4.04
2445 2552 0.908505 CGCTCGTTTTCGCTAGTCTC 59.091 55.000 0.00 0.00 43.73 3.36
2446 2553 0.456312 CCGCTCGTTTTCGCTAGTCT 60.456 55.000 0.00 0.00 43.73 3.24
2447 2554 1.411493 CCCGCTCGTTTTCGCTAGTC 61.411 60.000 0.00 0.00 43.73 2.59
2448 2555 1.445582 CCCGCTCGTTTTCGCTAGT 60.446 57.895 0.00 0.00 43.73 2.57
2449 2556 2.799540 GCCCGCTCGTTTTCGCTAG 61.800 63.158 0.00 0.00 43.73 3.42
2450 2557 2.812178 GCCCGCTCGTTTTCGCTA 60.812 61.111 0.00 0.00 43.73 4.26
2453 2560 2.613506 AAAGGCCCGCTCGTTTTCG 61.614 57.895 0.00 0.00 45.64 3.46
2454 2561 1.081442 CAAAGGCCCGCTCGTTTTC 60.081 57.895 0.00 0.00 0.00 2.29
2455 2562 3.039134 CAAAGGCCCGCTCGTTTT 58.961 55.556 0.00 0.00 0.00 2.43
2456 2563 3.670377 GCAAAGGCCCGCTCGTTT 61.670 61.111 0.00 0.00 0.00 3.60
2457 2564 4.947147 TGCAAAGGCCCGCTCGTT 62.947 61.111 0.00 0.00 40.13 3.85
2458 2565 4.722700 ATGCAAAGGCCCGCTCGT 62.723 61.111 0.00 0.00 40.13 4.18
2459 2566 4.183686 CATGCAAAGGCCCGCTCG 62.184 66.667 0.00 0.00 40.13 5.03
2460 2567 2.751436 TCATGCAAAGGCCCGCTC 60.751 61.111 0.00 0.00 40.13 5.03
2461 2568 2.753043 CTCATGCAAAGGCCCGCT 60.753 61.111 0.00 0.00 40.13 5.52
2462 2569 3.064324 ACTCATGCAAAGGCCCGC 61.064 61.111 0.00 0.00 40.13 6.13
2463 2570 1.243342 TTCACTCATGCAAAGGCCCG 61.243 55.000 0.00 0.00 40.13 6.13
2464 2571 0.529378 CTTCACTCATGCAAAGGCCC 59.471 55.000 0.00 0.00 40.13 5.80
2465 2572 1.538047 TCTTCACTCATGCAAAGGCC 58.462 50.000 0.00 0.00 40.13 5.19
2466 2573 2.159282 CCATCTTCACTCATGCAAAGGC 60.159 50.000 0.00 0.00 41.68 4.35
2467 2574 3.349927 TCCATCTTCACTCATGCAAAGG 58.650 45.455 0.00 0.00 0.00 3.11
2468 2575 4.142447 CCTTCCATCTTCACTCATGCAAAG 60.142 45.833 0.00 0.00 0.00 2.77
2469 2576 3.760151 CCTTCCATCTTCACTCATGCAAA 59.240 43.478 0.00 0.00 0.00 3.68
2470 2577 3.349927 CCTTCCATCTTCACTCATGCAA 58.650 45.455 0.00 0.00 0.00 4.08
2471 2578 2.356432 CCCTTCCATCTTCACTCATGCA 60.356 50.000 0.00 0.00 0.00 3.96
2472 2579 2.092753 TCCCTTCCATCTTCACTCATGC 60.093 50.000 0.00 0.00 0.00 4.06
2473 2580 3.920231 TCCCTTCCATCTTCACTCATG 57.080 47.619 0.00 0.00 0.00 3.07
2474 2581 3.784763 ACATCCCTTCCATCTTCACTCAT 59.215 43.478 0.00 0.00 0.00 2.90
2475 2582 3.054875 CACATCCCTTCCATCTTCACTCA 60.055 47.826 0.00 0.00 0.00 3.41
2476 2583 3.198635 TCACATCCCTTCCATCTTCACTC 59.801 47.826 0.00 0.00 0.00 3.51
2477 2584 3.184628 TCACATCCCTTCCATCTTCACT 58.815 45.455 0.00 0.00 0.00 3.41
2478 2585 3.539604 CTCACATCCCTTCCATCTTCAC 58.460 50.000 0.00 0.00 0.00 3.18
2479 2586 2.507058 CCTCACATCCCTTCCATCTTCA 59.493 50.000 0.00 0.00 0.00 3.02
2480 2587 2.747799 GCCTCACATCCCTTCCATCTTC 60.748 54.545 0.00 0.00 0.00 2.87
2481 2588 1.213926 GCCTCACATCCCTTCCATCTT 59.786 52.381 0.00 0.00 0.00 2.40
2482 2589 0.842635 GCCTCACATCCCTTCCATCT 59.157 55.000 0.00 0.00 0.00 2.90
2483 2590 0.533755 CGCCTCACATCCCTTCCATC 60.534 60.000 0.00 0.00 0.00 3.51
2484 2591 1.274703 ACGCCTCACATCCCTTCCAT 61.275 55.000 0.00 0.00 0.00 3.41
2485 2592 1.488705 AACGCCTCACATCCCTTCCA 61.489 55.000 0.00 0.00 0.00 3.53
2486 2593 0.322546 AAACGCCTCACATCCCTTCC 60.323 55.000 0.00 0.00 0.00 3.46
2487 2594 2.007608 GTAAACGCCTCACATCCCTTC 58.992 52.381 0.00 0.00 0.00 3.46
2488 2595 1.349688 TGTAAACGCCTCACATCCCTT 59.650 47.619 0.00 0.00 0.00 3.95
2489 2596 0.981183 TGTAAACGCCTCACATCCCT 59.019 50.000 0.00 0.00 0.00 4.20
2490 2597 1.670811 CATGTAAACGCCTCACATCCC 59.329 52.381 0.00 0.00 30.59 3.85
2491 2598 1.670811 CCATGTAAACGCCTCACATCC 59.329 52.381 0.00 0.00 30.59 3.51
2492 2599 2.095853 CACCATGTAAACGCCTCACATC 59.904 50.000 0.00 0.00 30.59 3.06
2493 2600 2.083774 CACCATGTAAACGCCTCACAT 58.916 47.619 0.00 0.00 33.22 3.21
2494 2601 1.202710 ACACCATGTAAACGCCTCACA 60.203 47.619 0.00 0.00 0.00 3.58
2495 2602 1.463444 GACACCATGTAAACGCCTCAC 59.537 52.381 0.00 0.00 0.00 3.51
2496 2603 1.346395 AGACACCATGTAAACGCCTCA 59.654 47.619 0.00 0.00 0.00 3.86
2497 2604 2.094762 AGACACCATGTAAACGCCTC 57.905 50.000 0.00 0.00 0.00 4.70
2498 2605 2.561478 AAGACACCATGTAAACGCCT 57.439 45.000 0.00 0.00 0.00 5.52
2499 2606 2.812011 AGAAAGACACCATGTAAACGCC 59.188 45.455 0.00 0.00 0.00 5.68
2500 2607 4.483476 AAGAAAGACACCATGTAAACGC 57.517 40.909 0.00 0.00 0.00 4.84
2501 2608 6.854381 GGTTTAAGAAAGACACCATGTAAACG 59.146 38.462 0.00 0.00 0.00 3.60
2502 2609 7.937649 AGGTTTAAGAAAGACACCATGTAAAC 58.062 34.615 0.00 0.00 0.00 2.01
2503 2610 7.229907 GGAGGTTTAAGAAAGACACCATGTAAA 59.770 37.037 0.00 0.00 0.00 2.01
2504 2611 6.713450 GGAGGTTTAAGAAAGACACCATGTAA 59.287 38.462 0.00 0.00 0.00 2.41
2505 2612 6.183361 TGGAGGTTTAAGAAAGACACCATGTA 60.183 38.462 0.00 0.00 0.00 2.29
2506 2613 5.070685 GGAGGTTTAAGAAAGACACCATGT 58.929 41.667 0.00 0.00 0.00 3.21
2507 2614 5.070001 TGGAGGTTTAAGAAAGACACCATG 58.930 41.667 0.00 0.00 0.00 3.66
2508 2615 5.319043 TGGAGGTTTAAGAAAGACACCAT 57.681 39.130 0.00 0.00 0.00 3.55
2509 2616 4.781775 TGGAGGTTTAAGAAAGACACCA 57.218 40.909 0.00 0.00 0.00 4.17
2510 2617 7.575155 GCTTATTGGAGGTTTAAGAAAGACACC 60.575 40.741 0.00 0.00 0.00 4.16
2511 2618 7.175119 AGCTTATTGGAGGTTTAAGAAAGACAC 59.825 37.037 0.00 0.00 0.00 3.67
2512 2619 7.174946 CAGCTTATTGGAGGTTTAAGAAAGACA 59.825 37.037 0.00 0.00 0.00 3.41
2513 2620 7.530863 CAGCTTATTGGAGGTTTAAGAAAGAC 58.469 38.462 0.00 0.00 0.00 3.01
2514 2621 6.151144 GCAGCTTATTGGAGGTTTAAGAAAGA 59.849 38.462 0.00 0.00 0.00 2.52
2515 2622 6.151817 AGCAGCTTATTGGAGGTTTAAGAAAG 59.848 38.462 0.00 0.00 0.00 2.62
2516 2623 6.010219 AGCAGCTTATTGGAGGTTTAAGAAA 58.990 36.000 0.00 0.00 0.00 2.52
2517 2624 5.570320 AGCAGCTTATTGGAGGTTTAAGAA 58.430 37.500 0.00 0.00 0.00 2.52
2518 2625 5.045578 AGAGCAGCTTATTGGAGGTTTAAGA 60.046 40.000 0.00 0.00 0.00 2.10
2519 2626 5.189180 AGAGCAGCTTATTGGAGGTTTAAG 58.811 41.667 0.00 0.00 0.00 1.85
2520 2627 5.045578 AGAGAGCAGCTTATTGGAGGTTTAA 60.046 40.000 0.00 0.00 0.00 1.52
2521 2628 4.471386 AGAGAGCAGCTTATTGGAGGTTTA 59.529 41.667 0.00 0.00 0.00 2.01
2522 2629 3.265479 AGAGAGCAGCTTATTGGAGGTTT 59.735 43.478 0.00 0.00 0.00 3.27
2523 2630 2.843113 AGAGAGCAGCTTATTGGAGGTT 59.157 45.455 0.00 0.00 0.00 3.50
2524 2631 2.476199 AGAGAGCAGCTTATTGGAGGT 58.524 47.619 0.00 0.00 0.00 3.85
2525 2632 4.679373 TTAGAGAGCAGCTTATTGGAGG 57.321 45.455 0.00 0.00 0.00 4.30
2526 2633 6.100404 AGATTAGAGAGCAGCTTATTGGAG 57.900 41.667 0.00 0.00 0.00 3.86
2527 2634 6.326064 AGAAGATTAGAGAGCAGCTTATTGGA 59.674 38.462 0.00 0.00 0.00 3.53
2528 2635 6.523840 AGAAGATTAGAGAGCAGCTTATTGG 58.476 40.000 0.00 0.00 0.00 3.16
2529 2636 8.436046 AAAGAAGATTAGAGAGCAGCTTATTG 57.564 34.615 0.00 0.00 0.00 1.90
2530 2637 8.485392 AGAAAGAAGATTAGAGAGCAGCTTATT 58.515 33.333 0.00 0.00 0.00 1.40
2531 2638 8.021898 AGAAAGAAGATTAGAGAGCAGCTTAT 57.978 34.615 0.00 0.00 0.00 1.73
2532 2639 7.416964 AGAAAGAAGATTAGAGAGCAGCTTA 57.583 36.000 0.00 0.00 0.00 3.09
2533 2640 6.298441 AGAAAGAAGATTAGAGAGCAGCTT 57.702 37.500 0.00 0.00 0.00 3.74
2534 2641 5.937975 AGAAAGAAGATTAGAGAGCAGCT 57.062 39.130 0.00 0.00 0.00 4.24
2535 2642 5.523552 GGAAGAAAGAAGATTAGAGAGCAGC 59.476 44.000 0.00 0.00 0.00 5.25
2536 2643 6.638610 TGGAAGAAAGAAGATTAGAGAGCAG 58.361 40.000 0.00 0.00 0.00 4.24
2537 2644 6.611613 TGGAAGAAAGAAGATTAGAGAGCA 57.388 37.500 0.00 0.00 0.00 4.26
2538 2645 7.047271 ACATGGAAGAAAGAAGATTAGAGAGC 58.953 38.462 0.00 0.00 0.00 4.09
2539 2646 9.097257 GAACATGGAAGAAAGAAGATTAGAGAG 57.903 37.037 0.00 0.00 0.00 3.20
2540 2647 8.043710 GGAACATGGAAGAAAGAAGATTAGAGA 58.956 37.037 0.00 0.00 0.00 3.10
2541 2648 8.046107 AGGAACATGGAAGAAAGAAGATTAGAG 58.954 37.037 0.00 0.00 0.00 2.43
2542 2649 7.922382 AGGAACATGGAAGAAAGAAGATTAGA 58.078 34.615 0.00 0.00 0.00 2.10
2543 2650 8.046107 AGAGGAACATGGAAGAAAGAAGATTAG 58.954 37.037 0.00 0.00 0.00 1.73
2544 2651 7.826252 CAGAGGAACATGGAAGAAAGAAGATTA 59.174 37.037 0.00 0.00 0.00 1.75
2545 2652 6.658391 CAGAGGAACATGGAAGAAAGAAGATT 59.342 38.462 0.00 0.00 0.00 2.40
2546 2653 6.013032 TCAGAGGAACATGGAAGAAAGAAGAT 60.013 38.462 0.00 0.00 0.00 2.40
2547 2654 5.307976 TCAGAGGAACATGGAAGAAAGAAGA 59.692 40.000 0.00 0.00 0.00 2.87
2548 2655 5.555017 TCAGAGGAACATGGAAGAAAGAAG 58.445 41.667 0.00 0.00 0.00 2.85
2549 2656 5.567037 TCAGAGGAACATGGAAGAAAGAA 57.433 39.130 0.00 0.00 0.00 2.52
2550 2657 5.486775 AGATCAGAGGAACATGGAAGAAAGA 59.513 40.000 0.00 0.00 0.00 2.52
2551 2658 5.743117 AGATCAGAGGAACATGGAAGAAAG 58.257 41.667 0.00 0.00 0.00 2.62
2552 2659 5.768980 AGATCAGAGGAACATGGAAGAAA 57.231 39.130 0.00 0.00 0.00 2.52
2553 2660 5.721480 TGTAGATCAGAGGAACATGGAAGAA 59.279 40.000 0.00 0.00 0.00 2.52
2554 2661 5.127845 GTGTAGATCAGAGGAACATGGAAGA 59.872 44.000 0.00 0.00 0.00 2.87
2555 2662 5.105187 TGTGTAGATCAGAGGAACATGGAAG 60.105 44.000 0.00 0.00 0.00 3.46
2556 2663 4.777366 TGTGTAGATCAGAGGAACATGGAA 59.223 41.667 0.00 0.00 0.00 3.53
2557 2664 4.352893 TGTGTAGATCAGAGGAACATGGA 58.647 43.478 0.00 0.00 0.00 3.41
2558 2665 4.743057 TGTGTAGATCAGAGGAACATGG 57.257 45.455 0.00 0.00 0.00 3.66
2559 2666 4.564372 CGTTGTGTAGATCAGAGGAACATG 59.436 45.833 0.00 0.00 0.00 3.21
2560 2667 4.382040 CCGTTGTGTAGATCAGAGGAACAT 60.382 45.833 0.00 0.00 0.00 2.71
2561 2668 3.056821 CCGTTGTGTAGATCAGAGGAACA 60.057 47.826 0.00 0.00 0.00 3.18
2562 2669 3.056749 ACCGTTGTGTAGATCAGAGGAAC 60.057 47.826 0.00 0.00 0.00 3.62
2563 2670 3.056821 CACCGTTGTGTAGATCAGAGGAA 60.057 47.826 0.00 0.00 37.72 3.36
2564 2671 2.492088 CACCGTTGTGTAGATCAGAGGA 59.508 50.000 0.00 0.00 37.72 3.71
2565 2672 2.881074 CACCGTTGTGTAGATCAGAGG 58.119 52.381 0.00 0.00 37.72 3.69
2566 2673 2.094494 AGCACCGTTGTGTAGATCAGAG 60.094 50.000 0.00 0.00 44.65 3.35
2567 2674 1.893137 AGCACCGTTGTGTAGATCAGA 59.107 47.619 0.00 0.00 44.65 3.27
2568 2675 2.370281 AGCACCGTTGTGTAGATCAG 57.630 50.000 0.00 0.00 44.65 2.90
2569 2676 2.683968 GAAGCACCGTTGTGTAGATCA 58.316 47.619 0.00 0.00 44.65 2.92
2570 2677 1.654105 CGAAGCACCGTTGTGTAGATC 59.346 52.381 0.00 0.00 44.65 2.75
2571 2678 1.710013 CGAAGCACCGTTGTGTAGAT 58.290 50.000 0.00 0.00 44.65 1.98
2572 2679 3.188773 CGAAGCACCGTTGTGTAGA 57.811 52.632 0.00 0.00 44.65 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.