Multiple sequence alignment - TraesCS7B01G345400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G345400 chr7B 100.000 2213 0 0 1 2213 601120005 601117793 0.000000e+00 4087
1 TraesCS7B01G345400 chr7B 93.607 219 14 0 1002 1220 600995486 600995268 5.890000e-86 327
2 TraesCS7B01G345400 chr7A 89.922 774 42 15 533 1272 640667259 640666488 0.000000e+00 965
3 TraesCS7B01G345400 chr7A 93.973 365 20 2 1851 2213 640666042 640665678 3.210000e-153 551
4 TraesCS7B01G345400 chr7A 95.872 218 9 0 1002 1219 640581772 640581555 9.720000e-94 353
5 TraesCS7B01G345400 chr7A 92.019 213 17 0 1002 1214 640598127 640597915 1.280000e-77 300
6 TraesCS7B01G345400 chr7A 84.400 250 24 10 1347 1584 182858830 182859076 4.750000e-57 231
7 TraesCS7B01G345400 chr7A 86.911 191 23 2 1600 1789 646126851 646126662 1.720000e-51 213
8 TraesCS7B01G345400 chr7A 89.011 91 6 3 345 432 640667363 640667274 2.320000e-20 110
9 TraesCS7B01G345400 chr7D 91.741 448 16 7 909 1341 555192166 555192607 8.740000e-169 603
10 TraesCS7B01G345400 chr7D 92.033 364 16 10 526 876 555191802 555192165 1.180000e-137 499
11 TraesCS7B01G345400 chr7D 84.382 461 43 7 1337 1790 567337896 567338334 2.030000e-115 425
12 TraesCS7B01G345400 chr7D 95.595 227 10 0 1987 2213 555192867 555193093 4.490000e-97 364
13 TraesCS7B01G345400 chr7D 90.308 227 13 3 1002 1219 555188934 555189160 2.780000e-74 289
14 TraesCS7B01G345400 chr7D 88.841 233 11 8 1002 1219 553814114 553814346 2.800000e-69 272
15 TraesCS7B01G345400 chr7D 91.620 179 9 4 27 204 27456270 27456097 2.200000e-60 243
16 TraesCS7B01G345400 chr7D 88.889 207 9 1 1793 1999 555192647 555192839 2.200000e-60 243
17 TraesCS7B01G345400 chr7D 88.601 193 14 7 27 217 426823635 426823449 6.150000e-56 228
18 TraesCS7B01G345400 chr7D 94.231 104 6 0 336 439 555191702 555191805 2.270000e-35 159
19 TraesCS7B01G345400 chr2A 87.719 456 43 10 1345 1790 31880923 31880471 9.060000e-144 520
20 TraesCS7B01G345400 chr2A 85.996 457 42 9 1346 1783 739692472 739692925 9.250000e-129 470
21 TraesCS7B01G345400 chr2D 86.957 460 37 12 1336 1786 615151841 615151396 1.530000e-136 496
22 TraesCS7B01G345400 chr5D 86.344 454 42 10 1345 1783 491269291 491269739 5.530000e-131 477
23 TraesCS7B01G345400 chr5D 89.175 194 18 3 1600 1791 264500857 264501049 2.840000e-59 239
24 TraesCS7B01G345400 chr5D 88.827 179 13 6 27 204 484843179 484843351 1.720000e-51 213
25 TraesCS7B01G345400 chr3A 87.451 255 28 4 27 280 28396350 28396601 7.730000e-75 291
26 TraesCS7B01G345400 chr1B 87.500 256 25 2 1338 1588 420236688 420236941 2.780000e-74 289
27 TraesCS7B01G345400 chr1B 85.484 248 24 9 1342 1583 651288186 651287945 4.720000e-62 248
28 TraesCS7B01G345400 chrUn 86.939 245 22 7 1347 1584 40578236 40578477 1.300000e-67 267
29 TraesCS7B01G345400 chrUn 87.766 188 21 2 1600 1786 108450045 108449859 3.700000e-53 219
30 TraesCS7B01G345400 chr2B 86.508 252 16 12 1348 1587 180568177 180567932 6.060000e-66 261
31 TraesCS7B01G345400 chr2B 84.462 251 25 10 1345 1584 473766185 473766432 3.670000e-58 235
32 TraesCS7B01G345400 chr3D 94.771 153 6 1 27 179 466800205 466800355 1.020000e-58 237
33 TraesCS7B01G345400 chr3D 87.500 184 23 0 1600 1783 56415512 56415695 1.720000e-51 213
34 TraesCS7B01G345400 chr1D 83.922 255 29 10 1337 1584 908970 908721 1.320000e-57 233
35 TraesCS7B01G345400 chr1D 94.118 153 7 1 27 179 492216780 492216630 4.750000e-57 231
36 TraesCS7B01G345400 chr1D 93.464 153 8 1 27 179 426414501 426414351 2.210000e-55 226
37 TraesCS7B01G345400 chr5B 94.079 152 7 1 28 179 446421275 446421126 1.710000e-56 230
38 TraesCS7B01G345400 chr5B 94.079 152 7 1 28 179 447195098 447195247 1.710000e-56 230


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G345400 chr7B 601117793 601120005 2212 True 4087.0 4087 100.000000 1 2213 1 chr7B.!!$R2 2212
1 TraesCS7B01G345400 chr7A 640665678 640667363 1685 True 542.0 965 90.968667 345 2213 3 chr7A.!!$R4 1868
2 TraesCS7B01G345400 chr7D 555188934 555193093 4159 False 359.5 603 92.132833 336 2213 6 chr7D.!!$F3 1877

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
166 167 0.104671 GCAGTGCCCACAACATGTTT 59.895 50.0 8.77 0.0 0.0 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1639 4476 0.039527 GCATGTTGACCGGGTTTGAC 60.04 55.0 6.32 1.31 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.785453 GGCCTCTGGTCCGCCTTG 62.785 72.222 0.00 0.00 39.70 3.61
28 29 4.785453 CCTCTGGTCCGCCTTGCC 62.785 72.222 0.00 0.00 35.27 4.52
82 83 4.480031 GGCGGAGAAGACGAAGAC 57.520 61.111 0.00 0.00 0.00 3.01
85 86 1.863880 CGGAGAAGACGAAGACGCG 60.864 63.158 3.53 3.53 43.96 6.01
86 87 1.514443 GGAGAAGACGAAGACGCGG 60.514 63.158 12.47 0.00 43.96 6.46
88 89 3.179939 GAAGACGAAGACGCGGCC 61.180 66.667 9.25 0.00 41.12 6.13
94 95 4.430765 GAAGACGCGGCCGAGGAA 62.431 66.667 33.48 0.00 38.29 3.36
95 96 4.436998 AAGACGCGGCCGAGGAAG 62.437 66.667 33.48 16.07 38.29 3.46
105 106 4.493747 CGAGGAAGACGCCCGGTC 62.494 72.222 0.00 0.00 46.45 4.79
118 119 4.530857 CGGTCGGCTGGGGTCATC 62.531 72.222 0.00 0.00 0.00 2.92
119 120 4.530857 GGTCGGCTGGGGTCATCG 62.531 72.222 0.00 0.00 0.00 3.84
144 145 2.894387 GCTCGAGCTCATGTGGCC 60.894 66.667 29.88 0.00 38.21 5.36
145 146 2.202987 CTCGAGCTCATGTGGCCC 60.203 66.667 15.40 0.00 0.00 5.80
151 152 4.415150 CTCATGTGGCCCGGCAGT 62.415 66.667 12.58 0.00 0.00 4.40
152 153 4.720902 TCATGTGGCCCGGCAGTG 62.721 66.667 12.58 4.09 0.00 3.66
163 164 2.652530 GGCAGTGCCCACAACATG 59.347 61.111 24.53 0.00 44.06 3.21
164 165 2.202395 GGCAGTGCCCACAACATGT 61.202 57.895 24.53 0.00 44.06 3.21
165 166 1.741525 GCAGTGCCCACAACATGTT 59.258 52.632 4.92 4.92 0.00 2.71
166 167 0.104671 GCAGTGCCCACAACATGTTT 59.895 50.000 8.77 0.00 0.00 2.83
168 169 1.136695 CAGTGCCCACAACATGTTTGT 59.863 47.619 8.77 8.03 37.82 2.83
184 185 5.254339 TGTTTGTTGTAATGACATGCACA 57.746 34.783 0.00 0.00 34.86 4.57
185 186 5.654497 TGTTTGTTGTAATGACATGCACAA 58.346 33.333 10.38 10.38 33.85 3.33
186 187 6.279123 TGTTTGTTGTAATGACATGCACAAT 58.721 32.000 15.26 0.00 35.05 2.71
187 188 7.428826 TGTTTGTTGTAATGACATGCACAATA 58.571 30.769 15.26 11.58 35.05 1.90
188 189 7.922811 TGTTTGTTGTAATGACATGCACAATAA 59.077 29.630 15.26 15.37 35.05 1.40
189 190 8.759641 GTTTGTTGTAATGACATGCACAATAAA 58.240 29.630 21.44 21.44 38.68 1.40
190 191 8.877808 TTGTTGTAATGACATGCACAATAAAA 57.122 26.923 16.40 10.77 31.79 1.52
192 193 7.116090 TGTTGTAATGACATGCACAATAAAAGC 59.884 33.333 15.26 6.01 34.86 3.51
193 194 6.685657 TGTAATGACATGCACAATAAAAGCA 58.314 32.000 0.00 0.00 43.14 3.91
194 195 7.150640 TGTAATGACATGCACAATAAAAGCAA 58.849 30.769 0.00 0.00 42.15 3.91
195 196 7.654923 TGTAATGACATGCACAATAAAAGCAAA 59.345 29.630 0.00 0.00 42.15 3.68
196 197 7.493743 AATGACATGCACAATAAAAGCAAAA 57.506 28.000 0.00 0.00 42.15 2.44
238 239 7.247929 CCTATTAAAGGGACGACTGAAATTC 57.752 40.000 0.00 0.00 42.32 2.17
239 240 7.048512 CCTATTAAAGGGACGACTGAAATTCT 58.951 38.462 0.00 0.00 42.32 2.40
241 242 7.761038 ATTAAAGGGACGACTGAAATTCTTT 57.239 32.000 0.00 0.00 0.00 2.52
242 243 7.576861 TTAAAGGGACGACTGAAATTCTTTT 57.423 32.000 0.00 0.00 0.00 2.27
243 244 5.690997 AAGGGACGACTGAAATTCTTTTC 57.309 39.130 0.00 0.00 41.39 2.29
245 246 3.818773 GGGACGACTGAAATTCTTTTCCA 59.181 43.478 0.00 0.00 40.49 3.53
247 248 4.320275 GGACGACTGAAATTCTTTTCCACC 60.320 45.833 0.00 0.00 40.49 4.61
251 252 3.897505 ACTGAAATTCTTTTCCACCCCAG 59.102 43.478 0.00 0.00 40.49 4.45
252 253 4.151883 CTGAAATTCTTTTCCACCCCAGA 58.848 43.478 0.00 0.00 40.49 3.86
253 254 4.151883 TGAAATTCTTTTCCACCCCAGAG 58.848 43.478 0.00 0.00 40.49 3.35
254 255 3.903530 AATTCTTTTCCACCCCAGAGT 57.096 42.857 0.00 0.00 0.00 3.24
255 256 5.163034 TGAAATTCTTTTCCACCCCAGAGTA 60.163 40.000 0.00 0.00 40.49 2.59
256 257 5.333566 AATTCTTTTCCACCCCAGAGTAA 57.666 39.130 0.00 0.00 0.00 2.24
257 258 4.799715 TTCTTTTCCACCCCAGAGTAAA 57.200 40.909 0.00 0.00 0.00 2.01
258 259 4.367039 TCTTTTCCACCCCAGAGTAAAG 57.633 45.455 0.00 0.00 0.00 1.85
260 261 4.167307 TCTTTTCCACCCCAGAGTAAAGTT 59.833 41.667 0.00 0.00 0.00 2.66
261 262 5.370289 TCTTTTCCACCCCAGAGTAAAGTTA 59.630 40.000 0.00 0.00 0.00 2.24
262 263 4.903045 TTCCACCCCAGAGTAAAGTTAG 57.097 45.455 0.00 0.00 0.00 2.34
263 264 2.570302 TCCACCCCAGAGTAAAGTTAGC 59.430 50.000 0.00 0.00 0.00 3.09
265 266 1.066358 ACCCCAGAGTAAAGTTAGCGC 60.066 52.381 0.00 0.00 0.00 5.92
266 267 1.653151 CCCAGAGTAAAGTTAGCGCC 58.347 55.000 2.29 0.00 0.00 6.53
267 268 1.066430 CCCAGAGTAAAGTTAGCGCCA 60.066 52.381 2.29 0.00 0.00 5.69
269 270 2.673368 CCAGAGTAAAGTTAGCGCCAAG 59.327 50.000 2.29 0.00 0.00 3.61
270 271 2.673368 CAGAGTAAAGTTAGCGCCAAGG 59.327 50.000 2.29 0.00 0.00 3.61
271 272 1.397343 GAGTAAAGTTAGCGCCAAGGC 59.603 52.381 2.29 0.00 37.85 4.35
272 273 1.161843 GTAAAGTTAGCGCCAAGGCA 58.838 50.000 12.19 0.00 42.06 4.75
273 274 1.538075 GTAAAGTTAGCGCCAAGGCAA 59.462 47.619 12.19 0.00 42.06 4.52
274 275 0.313987 AAAGTTAGCGCCAAGGCAAC 59.686 50.000 12.19 8.16 42.06 4.17
275 276 1.524008 AAGTTAGCGCCAAGGCAACC 61.524 55.000 12.19 0.00 42.06 3.77
276 277 2.675075 TTAGCGCCAAGGCAACCC 60.675 61.111 12.19 0.00 42.06 4.11
277 278 4.733542 TAGCGCCAAGGCAACCCC 62.734 66.667 12.19 0.00 42.06 4.95
281 282 4.299796 GCCAAGGCAACCCCAGGA 62.300 66.667 6.14 0.00 41.49 3.86
282 283 2.283173 CCAAGGCAACCCCAGGAC 60.283 66.667 0.00 0.00 34.03 3.85
283 284 2.672996 CAAGGCAACCCCAGGACG 60.673 66.667 0.00 0.00 35.39 4.79
288 289 4.410400 CAACCCCAGGACGCCTCC 62.410 72.222 0.00 0.00 36.71 4.30
290 291 4.658786 ACCCCAGGACGCCTCCTT 62.659 66.667 0.90 0.00 45.77 3.36
291 292 4.101448 CCCCAGGACGCCTCCTTG 62.101 72.222 0.90 0.00 45.77 3.61
292 293 4.101448 CCCAGGACGCCTCCTTGG 62.101 72.222 7.36 7.36 45.77 3.61
293 294 4.101448 CCAGGACGCCTCCTTGGG 62.101 72.222 0.90 0.00 45.77 4.12
294 295 4.785453 CAGGACGCCTCCTTGGGC 62.785 72.222 0.90 0.00 45.77 5.36
301 302 2.113139 CCTCCTTGGGCACAACGT 59.887 61.111 0.00 0.00 32.14 3.99
302 303 1.966451 CCTCCTTGGGCACAACGTC 60.966 63.158 0.00 0.00 32.14 4.34
304 305 1.227823 TCCTTGGGCACAACGTCTG 60.228 57.895 0.00 0.00 32.14 3.51
305 306 1.227823 CCTTGGGCACAACGTCTGA 60.228 57.895 0.00 0.00 32.14 3.27
306 307 0.817634 CCTTGGGCACAACGTCTGAA 60.818 55.000 0.00 0.00 32.14 3.02
308 309 0.179234 TTGGGCACAACGTCTGAAGA 59.821 50.000 0.00 0.00 0.00 2.87
309 310 0.396435 TGGGCACAACGTCTGAAGAT 59.604 50.000 0.00 0.00 0.00 2.40
311 312 0.166814 GGCACAACGTCTGAAGATGC 59.833 55.000 0.00 4.48 34.50 3.91
312 313 1.151668 GCACAACGTCTGAAGATGCT 58.848 50.000 0.00 0.00 34.50 3.79
314 315 2.681706 CACAACGTCTGAAGATGCTCT 58.318 47.619 0.00 0.00 34.50 4.09
316 317 4.237724 CACAACGTCTGAAGATGCTCTTA 58.762 43.478 0.00 0.00 36.73 2.10
318 319 4.021894 ACAACGTCTGAAGATGCTCTTACT 60.022 41.667 0.00 0.00 36.73 2.24
319 320 5.183331 ACAACGTCTGAAGATGCTCTTACTA 59.817 40.000 0.00 0.00 36.73 1.82
320 321 5.493133 ACGTCTGAAGATGCTCTTACTAG 57.507 43.478 0.00 0.00 36.73 2.57
321 322 4.201970 ACGTCTGAAGATGCTCTTACTAGC 60.202 45.833 0.00 0.00 36.73 3.42
329 330 2.990066 GCTCTTACTAGCACCCACAT 57.010 50.000 0.00 0.00 42.30 3.21
330 331 3.268023 GCTCTTACTAGCACCCACATT 57.732 47.619 0.00 0.00 42.30 2.71
335 336 6.686632 GCTCTTACTAGCACCCACATTAGAAT 60.687 42.308 0.00 0.00 42.30 2.40
338 339 8.934697 TCTTACTAGCACCCACATTAGAATAAT 58.065 33.333 0.00 0.00 0.00 1.28
339 340 9.209175 CTTACTAGCACCCACATTAGAATAATC 57.791 37.037 0.00 0.00 0.00 1.75
417 2854 2.363680 CCTATCAGAGTCCTGCACGAAT 59.636 50.000 0.00 0.00 40.20 3.34
441 2885 2.787601 CATGCATGCAACATACTCCC 57.212 50.000 26.68 0.00 0.00 4.30
442 2886 2.304092 CATGCATGCAACATACTCCCT 58.696 47.619 26.68 0.00 0.00 4.20
443 2887 2.042686 TGCATGCAACATACTCCCTC 57.957 50.000 20.30 0.00 0.00 4.30
444 2888 1.561076 TGCATGCAACATACTCCCTCT 59.439 47.619 20.30 0.00 0.00 3.69
445 2889 1.945394 GCATGCAACATACTCCCTCTG 59.055 52.381 14.21 0.00 0.00 3.35
446 2890 2.681976 GCATGCAACATACTCCCTCTGT 60.682 50.000 14.21 0.00 0.00 3.41
447 2891 3.201290 CATGCAACATACTCCCTCTGTC 58.799 50.000 0.00 0.00 0.00 3.51
448 2892 1.555075 TGCAACATACTCCCTCTGTCC 59.445 52.381 0.00 0.00 0.00 4.02
449 2893 1.834263 GCAACATACTCCCTCTGTCCT 59.166 52.381 0.00 0.00 0.00 3.85
450 2894 3.031736 GCAACATACTCCCTCTGTCCTA 58.968 50.000 0.00 0.00 0.00 2.94
451 2895 3.451178 GCAACATACTCCCTCTGTCCTAA 59.549 47.826 0.00 0.00 0.00 2.69
452 2896 4.081087 GCAACATACTCCCTCTGTCCTAAA 60.081 45.833 0.00 0.00 0.00 1.85
453 2897 5.570844 GCAACATACTCCCTCTGTCCTAAAA 60.571 44.000 0.00 0.00 0.00 1.52
454 2898 6.653989 CAACATACTCCCTCTGTCCTAAAAT 58.346 40.000 0.00 0.00 0.00 1.82
455 2899 7.635089 GCAACATACTCCCTCTGTCCTAAAATA 60.635 40.741 0.00 0.00 0.00 1.40
456 2900 8.432805 CAACATACTCCCTCTGTCCTAAAATAT 58.567 37.037 0.00 0.00 0.00 1.28
457 2901 9.670442 AACATACTCCCTCTGTCCTAAAATATA 57.330 33.333 0.00 0.00 0.00 0.86
458 2902 9.670442 ACATACTCCCTCTGTCCTAAAATATAA 57.330 33.333 0.00 0.00 0.00 0.98
519 2963 9.822185 TTTTTATATTTTAGGACGAGGGAGTAC 57.178 33.333 0.00 0.00 0.00 2.73
520 2964 8.773033 TTTATATTTTAGGACGAGGGAGTACT 57.227 34.615 0.00 0.00 39.04 2.73
521 2965 9.866655 TTTATATTTTAGGACGAGGGAGTACTA 57.133 33.333 0.00 0.00 36.54 1.82
524 2968 7.757941 ATTTTAGGACGAGGGAGTACTATAC 57.242 40.000 0.00 0.00 37.39 1.47
525 2969 6.506538 TTTAGGACGAGGGAGTACTATACT 57.493 41.667 0.00 0.00 37.39 2.12
526 2970 7.618019 TTTAGGACGAGGGAGTACTATACTA 57.382 40.000 0.00 0.00 37.39 1.82
527 2971 5.482163 AGGACGAGGGAGTACTATACTAC 57.518 47.826 0.00 0.00 39.59 2.73
528 2972 4.904251 AGGACGAGGGAGTACTATACTACA 59.096 45.833 0.00 0.00 41.58 2.74
529 2973 5.011943 AGGACGAGGGAGTACTATACTACAG 59.988 48.000 0.00 0.00 41.58 2.74
576 3025 0.248012 TAGCAATCAAAGTCGGCGGA 59.752 50.000 7.21 0.00 0.00 5.54
660 3117 2.810274 TCTAGCCGGATCGTGTGTATAC 59.190 50.000 5.05 0.00 0.00 1.47
665 3122 4.945543 AGCCGGATCGTGTGTATACATATA 59.054 41.667 5.05 0.00 39.39 0.86
695 3154 2.155924 GCTGCGTGAGTTCTGTACTTTC 59.844 50.000 0.00 0.00 37.17 2.62
714 3173 3.226346 TCGTATCACGGTGAGAAAAGG 57.774 47.619 16.84 7.70 42.81 3.11
874 3336 1.463444 GTTCAATGGTACGTGTCAGGC 59.537 52.381 0.00 0.00 0.00 4.85
890 3352 0.322816 AGGCTCGTACTTCGTACCCA 60.323 55.000 0.00 0.00 40.80 4.51
905 3367 0.325296 ACCCACGCCCTGATCTTCTA 60.325 55.000 0.00 0.00 0.00 2.10
907 3369 0.105039 CCACGCCCTGATCTTCTACC 59.895 60.000 0.00 0.00 0.00 3.18
917 3383 0.543749 ATCTTCTACCTGTGCCCTGC 59.456 55.000 0.00 0.00 0.00 4.85
1272 4105 6.421485 TCTCCACTACTACTACAGGTTTAGG 58.579 44.000 0.00 0.00 0.00 2.69
1273 4106 6.012157 TCTCCACTACTACTACAGGTTTAGGT 60.012 42.308 0.00 0.00 0.00 3.08
1274 4107 6.555711 TCCACTACTACTACAGGTTTAGGTT 58.444 40.000 0.00 0.00 0.00 3.50
1275 4108 7.012607 TCCACTACTACTACAGGTTTAGGTTT 58.987 38.462 0.00 0.00 0.00 3.27
1276 4109 8.170061 TCCACTACTACTACAGGTTTAGGTTTA 58.830 37.037 0.00 0.00 0.00 2.01
1277 4110 8.465201 CCACTACTACTACAGGTTTAGGTTTAG 58.535 40.741 0.00 0.00 0.00 1.85
1284 4117 5.959618 ACAGGTTTAGGTTTAGCATGAAC 57.040 39.130 0.00 0.00 0.00 3.18
1285 4118 5.631119 ACAGGTTTAGGTTTAGCATGAACT 58.369 37.500 0.00 0.00 29.81 3.01
1341 4178 2.645802 ACAGTGACCAACGCCTTTTTA 58.354 42.857 0.00 0.00 0.00 1.52
1346 4183 4.023193 AGTGACCAACGCCTTTTTATGAAG 60.023 41.667 0.00 0.00 0.00 3.02
1347 4184 4.023536 GTGACCAACGCCTTTTTATGAAGA 60.024 41.667 0.00 0.00 0.00 2.87
1348 4185 4.215399 TGACCAACGCCTTTTTATGAAGAG 59.785 41.667 0.00 0.00 0.00 2.85
1349 4186 4.394729 ACCAACGCCTTTTTATGAAGAGA 58.605 39.130 0.00 0.00 0.00 3.10
1351 4188 5.300792 ACCAACGCCTTTTTATGAAGAGAAA 59.699 36.000 0.00 0.00 0.00 2.52
1352 4189 6.183360 ACCAACGCCTTTTTATGAAGAGAAAA 60.183 34.615 0.00 0.00 0.00 2.29
1353 4190 6.363357 CCAACGCCTTTTTATGAAGAGAAAAG 59.637 38.462 0.00 0.00 39.11 2.27
1355 4192 7.739498 ACGCCTTTTTATGAAGAGAAAAGTA 57.261 32.000 0.00 0.00 38.22 2.24
1356 4193 8.336801 ACGCCTTTTTATGAAGAGAAAAGTAT 57.663 30.769 0.00 0.00 38.22 2.12
1357 4194 8.237267 ACGCCTTTTTATGAAGAGAAAAGTATG 58.763 33.333 0.00 0.00 38.22 2.39
1359 4196 9.914131 GCCTTTTTATGAAGAGAAAAGTATGTT 57.086 29.630 0.00 0.00 38.22 2.71
1367 4204 7.712797 TGAAGAGAAAAGTATGTTTTTGTCCC 58.287 34.615 8.87 4.61 0.00 4.46
1368 4205 7.559897 TGAAGAGAAAAGTATGTTTTTGTCCCT 59.440 33.333 8.87 0.00 0.00 4.20
1370 4207 7.060421 AGAGAAAAGTATGTTTTTGTCCCTGA 58.940 34.615 8.87 0.00 0.00 3.86
1372 4209 8.250143 AGAAAAGTATGTTTTTGTCCCTGAAT 57.750 30.769 0.00 0.00 0.00 2.57
1374 4211 9.325198 GAAAAGTATGTTTTTGTCCCTGAATTT 57.675 29.630 0.00 0.00 0.00 1.82
1375 4212 9.679661 AAAAGTATGTTTTTGTCCCTGAATTTT 57.320 25.926 0.00 0.00 0.00 1.82
1376 4213 9.679661 AAAGTATGTTTTTGTCCCTGAATTTTT 57.320 25.926 0.00 0.00 0.00 1.94
1377 4214 8.887036 AGTATGTTTTTGTCCCTGAATTTTTC 57.113 30.769 0.00 0.00 0.00 2.29
1379 4216 6.054860 TGTTTTTGTCCCTGAATTTTTCCA 57.945 33.333 0.00 0.00 0.00 3.53
1380 4217 6.476378 TGTTTTTGTCCCTGAATTTTTCCAA 58.524 32.000 0.00 0.00 0.00 3.53
1381 4218 6.942576 TGTTTTTGTCCCTGAATTTTTCCAAA 59.057 30.769 0.00 0.00 0.00 3.28
1382 4219 7.448469 TGTTTTTGTCCCTGAATTTTTCCAAAA 59.552 29.630 0.00 0.00 29.91 2.44
1383 4220 8.300286 GTTTTTGTCCCTGAATTTTTCCAAAAA 58.700 29.630 0.00 0.00 41.59 1.94
1385 4222 9.686683 TTTTGTCCCTGAATTTTTCCAAAAATA 57.313 25.926 9.83 0.00 45.16 1.40
1386 4223 9.859152 TTTGTCCCTGAATTTTTCCAAAAATAT 57.141 25.926 9.83 2.49 45.16 1.28
1398 4235 7.712204 TTTCCAAAAATATAGACTTGGTCCC 57.288 36.000 8.55 0.00 39.51 4.46
1399 4236 6.652205 TCCAAAAATATAGACTTGGTCCCT 57.348 37.500 8.55 0.00 39.51 4.20
1400 4237 7.039722 TCCAAAAATATAGACTTGGTCCCTT 57.960 36.000 8.55 0.00 39.51 3.95
1401 4238 8.165267 TCCAAAAATATAGACTTGGTCCCTTA 57.835 34.615 8.55 0.00 39.51 2.69
1402 4239 8.616598 TCCAAAAATATAGACTTGGTCCCTTAA 58.383 33.333 8.55 0.00 39.51 1.85
1403 4240 9.421399 CCAAAAATATAGACTTGGTCCCTTAAT 57.579 33.333 0.00 0.00 34.77 1.40
1433 4270 9.762381 TTTTGGTATATATTTGGTCCTTCAAGT 57.238 29.630 0.00 0.00 0.00 3.16
1434 4271 8.974060 TTGGTATATATTTGGTCCTTCAAGTC 57.026 34.615 0.00 0.00 0.00 3.01
1435 4272 8.331931 TGGTATATATTTGGTCCTTCAAGTCT 57.668 34.615 0.00 0.00 0.00 3.24
1436 4273 8.429641 TGGTATATATTTGGTCCTTCAAGTCTC 58.570 37.037 0.00 0.00 0.00 3.36
1437 4274 8.429641 GGTATATATTTGGTCCTTCAAGTCTCA 58.570 37.037 0.00 0.00 0.00 3.27
1438 4275 9.832445 GTATATATTTGGTCCTTCAAGTCTCAA 57.168 33.333 0.00 0.00 0.00 3.02
1440 4277 9.753674 ATATATTTGGTCCTTCAAGTCTCAAAA 57.246 29.630 0.00 0.00 0.00 2.44
1441 4278 5.576447 TTTGGTCCTTCAAGTCTCAAAAC 57.424 39.130 0.00 0.00 0.00 2.43
1442 4279 4.503714 TGGTCCTTCAAGTCTCAAAACT 57.496 40.909 0.00 0.00 0.00 2.66
1443 4280 5.623956 TGGTCCTTCAAGTCTCAAAACTA 57.376 39.130 0.00 0.00 0.00 2.24
1444 4281 5.611374 TGGTCCTTCAAGTCTCAAAACTAG 58.389 41.667 0.00 0.00 0.00 2.57
1445 4282 5.130477 TGGTCCTTCAAGTCTCAAAACTAGT 59.870 40.000 0.00 0.00 0.00 2.57
1446 4283 6.056236 GGTCCTTCAAGTCTCAAAACTAGTT 58.944 40.000 1.12 1.12 0.00 2.24
1447 4284 6.542735 GGTCCTTCAAGTCTCAAAACTAGTTT 59.457 38.462 15.22 15.22 0.00 2.66
1448 4285 7.410485 GTCCTTCAAGTCTCAAAACTAGTTTG 58.590 38.462 21.22 14.67 46.86 2.93
1449 4286 6.542370 TCCTTCAAGTCTCAAAACTAGTTTGG 59.458 38.462 21.22 18.31 45.73 3.28
1450 4287 6.318900 CCTTCAAGTCTCAAAACTAGTTTGGT 59.681 38.462 21.22 4.14 45.73 3.67
1451 4288 6.920569 TCAAGTCTCAAAACTAGTTTGGTC 57.079 37.500 21.22 12.64 45.73 4.02
1452 4289 5.820947 TCAAGTCTCAAAACTAGTTTGGTCC 59.179 40.000 21.22 10.38 45.73 4.46
1453 4290 5.367945 AGTCTCAAAACTAGTTTGGTCCA 57.632 39.130 21.22 2.27 45.73 4.02
1454 4291 5.751586 AGTCTCAAAACTAGTTTGGTCCAA 58.248 37.500 21.22 0.00 45.73 3.53
1455 4292 6.184789 AGTCTCAAAACTAGTTTGGTCCAAA 58.815 36.000 21.22 13.26 45.73 3.28
1456 4293 6.661805 AGTCTCAAAACTAGTTTGGTCCAAAA 59.338 34.615 21.22 3.62 45.73 2.44
1457 4294 6.750501 GTCTCAAAACTAGTTTGGTCCAAAAC 59.249 38.462 21.22 12.56 45.73 2.43
1474 4311 4.385358 AAAACCAGATTTTGAGCACGTT 57.615 36.364 0.00 0.00 39.13 3.99
1475 4312 3.354089 AACCAGATTTTGAGCACGTTG 57.646 42.857 0.00 0.00 0.00 4.10
1476 4313 2.571212 ACCAGATTTTGAGCACGTTGA 58.429 42.857 0.00 0.00 0.00 3.18
1477 4314 2.290641 ACCAGATTTTGAGCACGTTGAC 59.709 45.455 0.00 0.00 0.00 3.18
1478 4315 2.350772 CCAGATTTTGAGCACGTTGACC 60.351 50.000 0.00 0.00 0.00 4.02
1479 4316 1.531149 AGATTTTGAGCACGTTGACCG 59.469 47.619 0.00 0.00 44.03 4.79
1480 4317 0.591170 ATTTTGAGCACGTTGACCGG 59.409 50.000 0.00 0.00 42.24 5.28
1481 4318 1.440938 TTTTGAGCACGTTGACCGGG 61.441 55.000 6.32 0.00 45.00 5.73
1482 4319 3.818121 TTGAGCACGTTGACCGGGG 62.818 63.158 6.32 0.00 41.48 5.73
1485 4322 2.903350 GCACGTTGACCGGGGTTT 60.903 61.111 6.32 0.00 41.48 3.27
1486 4323 3.027292 CACGTTGACCGGGGTTTG 58.973 61.111 6.32 0.00 42.24 2.93
1487 4324 1.524165 CACGTTGACCGGGGTTTGA 60.524 57.895 6.32 0.00 42.24 2.69
1488 4325 1.524393 ACGTTGACCGGGGTTTGAC 60.524 57.895 6.32 0.00 42.24 3.18
1489 4326 2.255881 CGTTGACCGGGGTTTGACC 61.256 63.158 6.32 0.00 37.60 4.02
1490 4327 1.152922 GTTGACCGGGGTTTGACCA 60.153 57.895 6.32 0.00 41.02 4.02
1491 4328 0.538746 GTTGACCGGGGTTTGACCAT 60.539 55.000 6.32 0.00 41.02 3.55
1492 4329 0.538516 TTGACCGGGGTTTGACCATG 60.539 55.000 6.32 0.00 41.02 3.66
1493 4330 1.074248 GACCGGGGTTTGACCATGT 59.926 57.895 6.32 0.00 41.02 3.21
1494 4331 0.538746 GACCGGGGTTTGACCATGTT 60.539 55.000 6.32 0.00 41.02 2.71
1495 4332 0.825840 ACCGGGGTTTGACCATGTTG 60.826 55.000 6.32 0.00 41.02 3.33
1496 4333 0.538516 CCGGGGTTTGACCATGTTGA 60.539 55.000 0.00 0.00 41.02 3.18
1497 4334 0.596082 CGGGGTTTGACCATGTTGAC 59.404 55.000 0.00 0.00 41.02 3.18
1498 4335 0.966179 GGGGTTTGACCATGTTGACC 59.034 55.000 0.00 0.00 41.02 4.02
1499 4336 1.698506 GGGTTTGACCATGTTGACCA 58.301 50.000 0.00 0.00 41.02 4.02
1500 4337 1.613437 GGGTTTGACCATGTTGACCAG 59.387 52.381 0.00 0.00 41.02 4.00
1501 4338 1.613437 GGTTTGACCATGTTGACCAGG 59.387 52.381 0.00 0.00 38.42 4.45
1502 4339 2.306847 GTTTGACCATGTTGACCAGGT 58.693 47.619 0.00 0.00 37.00 4.00
1503 4340 2.693074 GTTTGACCATGTTGACCAGGTT 59.307 45.455 0.00 0.00 33.77 3.50
1504 4341 2.746279 TGACCATGTTGACCAGGTTT 57.254 45.000 0.00 0.00 33.77 3.27
1505 4342 2.305928 TGACCATGTTGACCAGGTTTG 58.694 47.619 0.00 0.00 33.77 2.93
1506 4343 2.092158 TGACCATGTTGACCAGGTTTGA 60.092 45.455 0.00 0.00 33.77 2.69
1507 4344 2.293399 GACCATGTTGACCAGGTTTGAC 59.707 50.000 0.00 0.00 33.77 3.18
1508 4345 1.613437 CCATGTTGACCAGGTTTGACC 59.387 52.381 0.00 0.00 38.99 4.02
1509 4346 1.266718 CATGTTGACCAGGTTTGACCG 59.733 52.381 0.00 0.00 44.90 4.79
1510 4347 0.542333 TGTTGACCAGGTTTGACCGA 59.458 50.000 0.00 0.00 44.90 4.69
1511 4348 1.142060 TGTTGACCAGGTTTGACCGAT 59.858 47.619 0.00 0.00 44.90 4.18
1512 4349 2.369203 TGTTGACCAGGTTTGACCGATA 59.631 45.455 0.00 0.00 44.90 2.92
1513 4350 3.181453 TGTTGACCAGGTTTGACCGATAA 60.181 43.478 0.00 0.00 44.90 1.75
1514 4351 3.773418 TGACCAGGTTTGACCGATAAA 57.227 42.857 0.00 0.00 44.90 1.40
1515 4352 3.404899 TGACCAGGTTTGACCGATAAAC 58.595 45.455 0.00 0.00 44.90 2.01
1516 4353 3.181453 TGACCAGGTTTGACCGATAAACA 60.181 43.478 0.00 0.00 44.90 2.83
1517 4354 3.816523 GACCAGGTTTGACCGATAAACAA 59.183 43.478 0.00 0.00 44.90 2.83
1518 4355 4.403734 ACCAGGTTTGACCGATAAACAAT 58.596 39.130 0.00 0.00 44.90 2.71
1519 4356 5.562635 ACCAGGTTTGACCGATAAACAATA 58.437 37.500 0.00 0.00 44.90 1.90
1520 4357 6.005198 ACCAGGTTTGACCGATAAACAATAA 58.995 36.000 0.00 0.00 44.90 1.40
1521 4358 6.490721 ACCAGGTTTGACCGATAAACAATAAA 59.509 34.615 0.00 0.00 44.90 1.40
1522 4359 7.177744 ACCAGGTTTGACCGATAAACAATAAAT 59.822 33.333 0.00 0.00 44.90 1.40
1523 4360 8.032451 CCAGGTTTGACCGATAAACAATAAATT 58.968 33.333 0.00 0.00 44.90 1.82
1524 4361 9.418045 CAGGTTTGACCGATAAACAATAAATTT 57.582 29.630 0.00 0.00 44.90 1.82
1525 4362 9.990360 AGGTTTGACCGATAAACAATAAATTTT 57.010 25.926 0.00 0.00 44.90 1.82
1574 4411 8.558973 AAAAATCTGAAATTTTGTGACAACCA 57.441 26.923 0.00 0.00 32.23 3.67
1575 4412 8.558973 AAAATCTGAAATTTTGTGACAACCAA 57.441 26.923 0.00 0.00 30.84 3.67
1576 4413 7.538303 AATCTGAAATTTTGTGACAACCAAC 57.462 32.000 0.00 0.00 0.00 3.77
1577 4414 6.030548 TCTGAAATTTTGTGACAACCAACA 57.969 33.333 0.00 0.00 0.00 3.33
1578 4415 6.638610 TCTGAAATTTTGTGACAACCAACAT 58.361 32.000 0.00 0.00 0.00 2.71
1579 4416 6.534436 TCTGAAATTTTGTGACAACCAACATG 59.466 34.615 0.00 0.00 0.00 3.21
1580 4417 5.064452 TGAAATTTTGTGACAACCAACATGC 59.936 36.000 0.00 0.00 0.00 4.06
1581 4418 3.883830 TTTTGTGACAACCAACATGCT 57.116 38.095 0.00 0.00 0.00 3.79
1582 4419 3.883830 TTTGTGACAACCAACATGCTT 57.116 38.095 0.00 0.00 0.00 3.91
1583 4420 2.867287 TGTGACAACCAACATGCTTG 57.133 45.000 0.00 0.00 0.00 4.01
1584 4421 2.098614 TGTGACAACCAACATGCTTGT 58.901 42.857 0.00 0.00 37.82 3.16
1585 4422 2.159268 TGTGACAACCAACATGCTTGTG 60.159 45.455 5.94 0.00 35.83 3.33
1586 4423 2.098934 GTGACAACCAACATGCTTGTGA 59.901 45.455 5.94 0.00 35.83 3.58
1587 4424 2.757314 TGACAACCAACATGCTTGTGAA 59.243 40.909 5.94 0.00 35.83 3.18
1588 4425 3.194329 TGACAACCAACATGCTTGTGAAA 59.806 39.130 5.94 0.00 35.83 2.69
1589 4426 4.180057 GACAACCAACATGCTTGTGAAAA 58.820 39.130 5.94 0.00 35.83 2.29
1590 4427 3.932089 ACAACCAACATGCTTGTGAAAAC 59.068 39.130 5.94 0.00 35.83 2.43
1591 4428 4.183101 CAACCAACATGCTTGTGAAAACT 58.817 39.130 5.94 0.00 35.83 2.66
1592 4429 5.105554 ACAACCAACATGCTTGTGAAAACTA 60.106 36.000 5.94 0.00 35.83 2.24
1593 4430 5.186996 ACCAACATGCTTGTGAAAACTAG 57.813 39.130 5.94 0.00 35.83 2.57
1594 4431 3.983344 CCAACATGCTTGTGAAAACTAGC 59.017 43.478 5.94 5.52 38.59 3.42
1598 4435 3.287312 TGCTTGTGAAAACTAGCATGC 57.713 42.857 10.51 10.51 41.87 4.06
1599 4436 2.886523 TGCTTGTGAAAACTAGCATGCT 59.113 40.909 25.99 25.99 41.87 3.79
1600 4437 3.318839 TGCTTGTGAAAACTAGCATGCTT 59.681 39.130 28.02 7.11 41.87 3.91
1601 4438 4.202141 TGCTTGTGAAAACTAGCATGCTTT 60.202 37.500 28.02 14.30 41.87 3.51
1602 4439 4.746611 GCTTGTGAAAACTAGCATGCTTTT 59.253 37.500 28.02 20.13 38.14 2.27
1603 4440 5.332808 GCTTGTGAAAACTAGCATGCTTTTG 60.333 40.000 28.02 18.19 38.14 2.44
1604 4441 5.512753 TGTGAAAACTAGCATGCTTTTGA 57.487 34.783 28.02 11.99 0.00 2.69
1605 4442 5.900425 TGTGAAAACTAGCATGCTTTTGAA 58.100 33.333 28.02 6.18 0.00 2.69
1606 4443 6.514947 TGTGAAAACTAGCATGCTTTTGAAT 58.485 32.000 28.02 6.39 0.00 2.57
1607 4444 6.985645 TGTGAAAACTAGCATGCTTTTGAATT 59.014 30.769 28.02 13.53 0.00 2.17
1608 4445 7.495279 TGTGAAAACTAGCATGCTTTTGAATTT 59.505 29.630 28.02 17.31 0.00 1.82
1609 4446 8.977505 GTGAAAACTAGCATGCTTTTGAATTTA 58.022 29.630 28.02 8.09 0.00 1.40
1610 4447 8.977505 TGAAAACTAGCATGCTTTTGAATTTAC 58.022 29.630 28.02 7.18 0.00 2.01
1611 4448 9.196552 GAAAACTAGCATGCTTTTGAATTTACT 57.803 29.630 28.02 3.41 0.00 2.24
1612 4449 8.524870 AAACTAGCATGCTTTTGAATTTACTG 57.475 30.769 28.02 0.00 0.00 2.74
1613 4450 7.219484 ACTAGCATGCTTTTGAATTTACTGT 57.781 32.000 28.02 0.00 0.00 3.55
1614 4451 7.661040 ACTAGCATGCTTTTGAATTTACTGTT 58.339 30.769 28.02 0.00 0.00 3.16
1615 4452 7.809806 ACTAGCATGCTTTTGAATTTACTGTTC 59.190 33.333 28.02 0.00 0.00 3.18
1616 4453 6.514947 AGCATGCTTTTGAATTTACTGTTCA 58.485 32.000 16.30 0.00 34.01 3.18
1617 4454 7.156673 AGCATGCTTTTGAATTTACTGTTCAT 58.843 30.769 16.30 0.00 35.68 2.57
1618 4455 7.330208 AGCATGCTTTTGAATTTACTGTTCATC 59.670 33.333 16.30 0.00 35.68 2.92
1619 4456 7.116662 GCATGCTTTTGAATTTACTGTTCATCA 59.883 33.333 11.37 0.00 35.68 3.07
1620 4457 9.146984 CATGCTTTTGAATTTACTGTTCATCAT 57.853 29.630 0.00 0.00 35.68 2.45
1621 4458 9.715121 ATGCTTTTGAATTTACTGTTCATCATT 57.285 25.926 0.00 0.00 35.68 2.57
1622 4459 9.195411 TGCTTTTGAATTTACTGTTCATCATTC 57.805 29.630 0.00 0.00 35.68 2.67
1623 4460 9.195411 GCTTTTGAATTTACTGTTCATCATTCA 57.805 29.630 0.00 0.00 35.68 2.57
1627 4464 9.474920 TTGAATTTACTGTTCATCATTCAAACC 57.525 29.630 0.00 0.00 35.68 3.27
1628 4465 8.859090 TGAATTTACTGTTCATCATTCAAACCT 58.141 29.630 0.00 0.00 31.07 3.50
1629 4466 9.132521 GAATTTACTGTTCATCATTCAAACCTG 57.867 33.333 0.00 0.00 0.00 4.00
1630 4467 6.573664 TTACTGTTCATCATTCAAACCTGG 57.426 37.500 0.00 0.00 0.00 4.45
1631 4468 4.473444 ACTGTTCATCATTCAAACCTGGT 58.527 39.130 0.00 0.00 0.00 4.00
1632 4469 4.520492 ACTGTTCATCATTCAAACCTGGTC 59.480 41.667 0.00 0.00 0.00 4.02
1633 4470 4.468713 TGTTCATCATTCAAACCTGGTCA 58.531 39.130 0.00 0.00 0.00 4.02
1634 4471 4.892345 TGTTCATCATTCAAACCTGGTCAA 59.108 37.500 0.00 0.00 0.00 3.18
1635 4472 5.221224 TGTTCATCATTCAAACCTGGTCAAC 60.221 40.000 0.00 0.00 0.00 3.18
1636 4473 3.501828 TCATCATTCAAACCTGGTCAACG 59.498 43.478 0.00 0.00 0.00 4.10
1637 4474 2.925724 TCATTCAAACCTGGTCAACGT 58.074 42.857 0.00 0.00 0.00 3.99
1638 4475 2.616376 TCATTCAAACCTGGTCAACGTG 59.384 45.455 0.00 0.00 0.00 4.49
1639 4476 1.384525 TTCAAACCTGGTCAACGTGG 58.615 50.000 0.00 0.00 0.00 4.94
1640 4477 0.253610 TCAAACCTGGTCAACGTGGT 59.746 50.000 0.00 0.00 0.00 4.16
1641 4478 0.661020 CAAACCTGGTCAACGTGGTC 59.339 55.000 0.00 0.00 31.64 4.02
1642 4479 0.253610 AAACCTGGTCAACGTGGTCA 59.746 50.000 0.00 0.00 31.64 4.02
1643 4480 0.253610 AACCTGGTCAACGTGGTCAA 59.746 50.000 0.00 0.00 31.64 3.18
1644 4481 0.253610 ACCTGGTCAACGTGGTCAAA 59.746 50.000 0.00 0.00 0.00 2.69
1645 4482 0.661020 CCTGGTCAACGTGGTCAAAC 59.339 55.000 0.00 0.00 0.00 2.93
1646 4483 0.661020 CTGGTCAACGTGGTCAAACC 59.339 55.000 0.00 0.00 39.22 3.27
1647 4484 0.748729 TGGTCAACGTGGTCAAACCC 60.749 55.000 0.00 0.00 37.50 4.11
1648 4485 1.644913 GTCAACGTGGTCAAACCCG 59.355 57.895 0.00 5.75 37.50 5.28
1649 4486 1.524165 TCAACGTGGTCAAACCCGG 60.524 57.895 0.00 0.00 37.50 5.73
1650 4487 1.820481 CAACGTGGTCAAACCCGGT 60.820 57.895 0.00 0.00 37.50 5.28
1651 4488 1.524393 AACGTGGTCAAACCCGGTC 60.524 57.895 0.00 0.00 37.50 4.79
1652 4489 2.109387 CGTGGTCAAACCCGGTCA 59.891 61.111 0.00 0.00 37.50 4.02
1653 4490 1.524165 CGTGGTCAAACCCGGTCAA 60.524 57.895 0.00 0.00 37.50 3.18
1654 4491 1.778027 CGTGGTCAAACCCGGTCAAC 61.778 60.000 0.00 0.00 37.50 3.18
1655 4492 0.748729 GTGGTCAAACCCGGTCAACA 60.749 55.000 0.00 0.00 37.50 3.33
1656 4493 0.183971 TGGTCAAACCCGGTCAACAT 59.816 50.000 0.00 0.00 37.50 2.71
1657 4494 0.596082 GGTCAAACCCGGTCAACATG 59.404 55.000 0.00 0.00 30.04 3.21
1658 4495 0.039527 GTCAAACCCGGTCAACATGC 60.040 55.000 0.00 0.00 0.00 4.06
1659 4496 0.179004 TCAAACCCGGTCAACATGCT 60.179 50.000 0.00 0.00 0.00 3.79
1660 4497 0.673437 CAAACCCGGTCAACATGCTT 59.327 50.000 0.00 0.00 0.00 3.91
1661 4498 1.883275 CAAACCCGGTCAACATGCTTA 59.117 47.619 0.00 0.00 0.00 3.09
1662 4499 2.279935 AACCCGGTCAACATGCTTAA 57.720 45.000 0.00 0.00 0.00 1.85
1663 4500 2.279935 ACCCGGTCAACATGCTTAAA 57.720 45.000 0.00 0.00 0.00 1.52
1664 4501 2.588620 ACCCGGTCAACATGCTTAAAA 58.411 42.857 0.00 0.00 0.00 1.52
1665 4502 3.161866 ACCCGGTCAACATGCTTAAAAT 58.838 40.909 0.00 0.00 0.00 1.82
1666 4503 3.056891 ACCCGGTCAACATGCTTAAAATG 60.057 43.478 0.00 0.00 0.00 2.32
1667 4504 3.056891 CCCGGTCAACATGCTTAAAATGT 60.057 43.478 0.00 0.00 39.95 2.71
1668 4505 3.919804 CCGGTCAACATGCTTAAAATGTG 59.080 43.478 0.00 1.32 38.27 3.21
1669 4506 3.919804 CGGTCAACATGCTTAAAATGTGG 59.080 43.478 4.63 2.58 38.27 4.17
1670 4507 4.558496 CGGTCAACATGCTTAAAATGTGGT 60.558 41.667 4.63 0.00 38.27 4.16
1671 4508 5.296748 GGTCAACATGCTTAAAATGTGGTT 58.703 37.500 4.63 0.00 38.27 3.67
1672 4509 5.757808 GGTCAACATGCTTAAAATGTGGTTT 59.242 36.000 4.63 0.00 38.27 3.27
1673 4510 6.259829 GGTCAACATGCTTAAAATGTGGTTTT 59.740 34.615 4.63 0.00 42.47 2.43
1674 4511 7.125113 GTCAACATGCTTAAAATGTGGTTTTG 58.875 34.615 4.63 0.77 40.17 2.44
1675 4512 6.259608 TCAACATGCTTAAAATGTGGTTTTGG 59.740 34.615 4.63 0.00 40.17 3.28
1676 4513 5.923204 ACATGCTTAAAATGTGGTTTTGGA 58.077 33.333 0.00 0.00 40.17 3.53
1677 4514 5.757808 ACATGCTTAAAATGTGGTTTTGGAC 59.242 36.000 0.00 0.00 40.17 4.02
1692 4529 5.069914 GGTTTTGGACCAAACTTATCTGGTT 59.930 40.000 19.42 0.00 46.12 3.67
1693 4530 6.407639 GGTTTTGGACCAAACTTATCTGGTTT 60.408 38.462 19.42 0.00 46.12 3.27
1694 4531 6.800072 TTTGGACCAAACTTATCTGGTTTT 57.200 33.333 15.89 0.00 46.12 2.43
1695 4532 5.782893 TGGACCAAACTTATCTGGTTTTG 57.217 39.130 0.00 0.00 46.12 2.44
1696 4533 5.450453 TGGACCAAACTTATCTGGTTTTGA 58.550 37.500 0.00 0.00 46.12 2.69
1697 4534 5.534654 TGGACCAAACTTATCTGGTTTTGAG 59.465 40.000 0.00 0.00 46.12 3.02
1698 4535 5.768164 GGACCAAACTTATCTGGTTTTGAGA 59.232 40.000 0.00 0.00 46.12 3.27
1699 4536 6.294010 GGACCAAACTTATCTGGTTTTGAGAC 60.294 42.308 0.00 0.00 46.12 3.36
1700 4537 6.365520 ACCAAACTTATCTGGTTTTGAGACT 58.634 36.000 0.00 0.00 43.62 3.24
1701 4538 6.833933 ACCAAACTTATCTGGTTTTGAGACTT 59.166 34.615 0.00 0.00 43.62 3.01
1702 4539 7.141363 CCAAACTTATCTGGTTTTGAGACTTG 58.859 38.462 0.00 0.00 35.09 3.16
1703 4540 7.013274 CCAAACTTATCTGGTTTTGAGACTTGA 59.987 37.037 0.00 0.00 35.09 3.02
1704 4541 8.405531 CAAACTTATCTGGTTTTGAGACTTGAA 58.594 33.333 0.00 0.00 35.09 2.69
1705 4542 7.736447 ACTTATCTGGTTTTGAGACTTGAAG 57.264 36.000 0.00 0.00 0.00 3.02
1706 4543 6.712547 ACTTATCTGGTTTTGAGACTTGAAGG 59.287 38.462 0.00 0.00 0.00 3.46
1707 4544 4.771114 TCTGGTTTTGAGACTTGAAGGA 57.229 40.909 0.00 0.00 0.00 3.36
1708 4545 4.451900 TCTGGTTTTGAGACTTGAAGGAC 58.548 43.478 0.00 0.00 0.00 3.85
1709 4546 3.551846 TGGTTTTGAGACTTGAAGGACC 58.448 45.455 0.00 0.00 0.00 4.46
1710 4547 3.053991 TGGTTTTGAGACTTGAAGGACCA 60.054 43.478 0.00 0.00 32.66 4.02
1711 4548 3.951680 GGTTTTGAGACTTGAAGGACCAA 59.048 43.478 0.00 0.00 0.00 3.67
1712 4549 4.401202 GGTTTTGAGACTTGAAGGACCAAA 59.599 41.667 0.00 1.04 0.00 3.28
1713 4550 5.069119 GGTTTTGAGACTTGAAGGACCAAAT 59.931 40.000 0.00 0.00 0.00 2.32
1714 4551 5.772825 TTTGAGACTTGAAGGACCAAATG 57.227 39.130 0.00 0.00 0.00 2.32
1715 4552 4.437682 TGAGACTTGAAGGACCAAATGT 57.562 40.909 0.00 0.00 0.00 2.71
1716 4553 5.560722 TGAGACTTGAAGGACCAAATGTA 57.439 39.130 0.00 0.00 0.00 2.29
1717 4554 6.126863 TGAGACTTGAAGGACCAAATGTAT 57.873 37.500 0.00 0.00 0.00 2.29
1718 4555 7.252612 TGAGACTTGAAGGACCAAATGTATA 57.747 36.000 0.00 0.00 0.00 1.47
1719 4556 7.861629 TGAGACTTGAAGGACCAAATGTATAT 58.138 34.615 0.00 0.00 0.00 0.86
1720 4557 8.988060 TGAGACTTGAAGGACCAAATGTATATA 58.012 33.333 0.00 0.00 0.00 0.86
1721 4558 9.832445 GAGACTTGAAGGACCAAATGTATATAA 57.168 33.333 0.00 0.00 0.00 0.98
1738 4575 8.974060 TGTATATAAAACAATCTTGAGGGACC 57.026 34.615 0.00 0.00 0.00 4.46
1739 4576 8.553153 TGTATATAAAACAATCTTGAGGGACCA 58.447 33.333 0.00 0.00 0.00 4.02
1740 4577 9.403583 GTATATAAAACAATCTTGAGGGACCAA 57.596 33.333 0.00 0.00 0.00 3.67
1741 4578 6.840780 ATAAAACAATCTTGAGGGACCAAG 57.159 37.500 0.00 0.00 43.58 3.61
1742 4579 3.884037 AACAATCTTGAGGGACCAAGT 57.116 42.857 0.00 0.00 42.95 3.16
1743 4580 3.425162 ACAATCTTGAGGGACCAAGTC 57.575 47.619 0.00 0.00 42.95 3.01
1744 4581 2.982488 ACAATCTTGAGGGACCAAGTCT 59.018 45.455 0.00 0.00 42.95 3.24
1745 4582 3.244700 ACAATCTTGAGGGACCAAGTCTG 60.245 47.826 0.00 0.00 42.95 3.51
1746 4583 2.103153 TCTTGAGGGACCAAGTCTGT 57.897 50.000 0.00 0.00 42.95 3.41
1747 4584 3.254093 TCTTGAGGGACCAAGTCTGTA 57.746 47.619 0.00 0.00 42.95 2.74
1748 4585 2.897969 TCTTGAGGGACCAAGTCTGTAC 59.102 50.000 0.00 0.00 42.95 2.90
1749 4586 2.696526 TGAGGGACCAAGTCTGTACT 57.303 50.000 0.00 0.00 37.65 2.73
1751 4588 3.314693 TGAGGGACCAAGTCTGTACTTT 58.685 45.455 0.00 0.00 43.60 2.66
1752 4589 3.714798 TGAGGGACCAAGTCTGTACTTTT 59.285 43.478 0.00 0.00 43.60 2.27
1753 4590 4.065789 GAGGGACCAAGTCTGTACTTTTG 58.934 47.826 0.00 0.00 43.60 2.44
1754 4591 3.714798 AGGGACCAAGTCTGTACTTTTGA 59.285 43.478 0.00 0.00 43.60 2.69
1755 4592 4.165372 AGGGACCAAGTCTGTACTTTTGAA 59.835 41.667 0.00 0.00 43.60 2.69
1756 4593 4.885325 GGGACCAAGTCTGTACTTTTGAAA 59.115 41.667 0.00 0.00 43.60 2.69
1757 4594 5.358725 GGGACCAAGTCTGTACTTTTGAAAA 59.641 40.000 0.00 0.00 43.60 2.29
1758 4595 6.127563 GGGACCAAGTCTGTACTTTTGAAAAA 60.128 38.462 0.00 0.00 43.60 1.94
1759 4596 6.750501 GGACCAAGTCTGTACTTTTGAAAAAC 59.249 38.462 0.00 0.00 43.60 2.43
1760 4597 7.362660 GGACCAAGTCTGTACTTTTGAAAAACT 60.363 37.037 0.00 0.00 43.60 2.66
1761 4598 7.892609 ACCAAGTCTGTACTTTTGAAAAACTT 58.107 30.769 0.00 0.00 43.60 2.66
1762 4599 7.812669 ACCAAGTCTGTACTTTTGAAAAACTTG 59.187 33.333 17.32 17.32 43.60 3.16
1763 4600 8.026607 CCAAGTCTGTACTTTTGAAAAACTTGA 58.973 33.333 22.36 7.81 43.60 3.02
1764 4601 9.065871 CAAGTCTGTACTTTTGAAAAACTTGAG 57.934 33.333 18.59 0.00 43.60 3.02
1765 4602 7.762382 AGTCTGTACTTTTGAAAAACTTGAGG 58.238 34.615 0.00 0.00 29.00 3.86
1766 4603 6.972901 GTCTGTACTTTTGAAAAACTTGAGGG 59.027 38.462 0.00 0.00 0.00 4.30
1767 4604 6.887545 TCTGTACTTTTGAAAAACTTGAGGGA 59.112 34.615 0.00 0.00 0.00 4.20
1768 4605 6.859017 TGTACTTTTGAAAAACTTGAGGGAC 58.141 36.000 0.00 0.00 0.00 4.46
1769 4606 5.339008 ACTTTTGAAAAACTTGAGGGACC 57.661 39.130 0.00 0.00 0.00 4.46
1770 4607 4.775253 ACTTTTGAAAAACTTGAGGGACCA 59.225 37.500 0.00 0.00 0.00 4.02
1771 4608 5.247337 ACTTTTGAAAAACTTGAGGGACCAA 59.753 36.000 0.00 0.00 0.00 3.67
1772 4609 5.746990 TTTGAAAAACTTGAGGGACCAAA 57.253 34.783 0.00 0.00 0.00 3.28
1773 4610 5.746990 TTGAAAAACTTGAGGGACCAAAA 57.253 34.783 0.00 0.00 0.00 2.44
1774 4611 5.746990 TGAAAAACTTGAGGGACCAAAAA 57.253 34.783 0.00 0.00 0.00 1.94
1775 4612 5.483811 TGAAAAACTTGAGGGACCAAAAAC 58.516 37.500 0.00 0.00 0.00 2.43
1776 4613 5.012148 TGAAAAACTTGAGGGACCAAAAACA 59.988 36.000 0.00 0.00 0.00 2.83
1777 4614 5.692115 AAAACTTGAGGGACCAAAAACAT 57.308 34.783 0.00 0.00 0.00 2.71
1778 4615 6.800072 AAAACTTGAGGGACCAAAAACATA 57.200 33.333 0.00 0.00 0.00 2.29
1779 4616 5.784578 AACTTGAGGGACCAAAAACATAC 57.215 39.130 0.00 0.00 0.00 2.39
1780 4617 5.061721 ACTTGAGGGACCAAAAACATACT 57.938 39.130 0.00 0.00 0.00 2.12
1781 4618 5.454966 ACTTGAGGGACCAAAAACATACTT 58.545 37.500 0.00 0.00 0.00 2.24
1782 4619 5.897250 ACTTGAGGGACCAAAAACATACTTT 59.103 36.000 0.00 0.00 0.00 2.66
1783 4620 7.064229 ACTTGAGGGACCAAAAACATACTTTA 58.936 34.615 0.00 0.00 0.00 1.85
1784 4621 6.887626 TGAGGGACCAAAAACATACTTTAC 57.112 37.500 0.00 0.00 0.00 2.01
1785 4622 6.607019 TGAGGGACCAAAAACATACTTTACT 58.393 36.000 0.00 0.00 0.00 2.24
1786 4623 7.064229 TGAGGGACCAAAAACATACTTTACTT 58.936 34.615 0.00 0.00 0.00 2.24
1787 4624 7.562088 TGAGGGACCAAAAACATACTTTACTTT 59.438 33.333 0.00 0.00 0.00 2.66
1788 4625 8.313944 AGGGACCAAAAACATACTTTACTTTT 57.686 30.769 0.00 0.00 0.00 2.27
1789 4626 8.764558 AGGGACCAAAAACATACTTTACTTTTT 58.235 29.630 0.00 0.00 0.00 1.94
1889 4726 8.523915 TCAGCACTCCAAAATATATTGTCATT 57.476 30.769 0.00 0.00 0.00 2.57
1977 4815 8.267894 CCAAATTAAGGGAGATAAGACAGAAGA 58.732 37.037 0.00 0.00 0.00 2.87
1993 4831 7.662897 AGACAGAAGACTAGTTAGAAAACAGG 58.337 38.462 0.00 0.00 38.12 4.00
1999 4837 5.934625 AGACTAGTTAGAAAACAGGCACATG 59.065 40.000 0.00 0.00 38.12 3.21
2001 4839 4.836125 AGTTAGAAAACAGGCACATGTG 57.164 40.909 21.83 21.83 38.12 3.21
2002 4840 4.207165 AGTTAGAAAACAGGCACATGTGT 58.793 39.130 26.01 5.37 38.12 3.72
2029 4907 2.961062 CCATTTCAAGGATCCACCCATC 59.039 50.000 15.82 0.00 40.05 3.51
2149 5028 3.457099 CTCTCCTTGAGCCTTCTGC 57.543 57.895 0.00 0.00 41.71 4.26
2204 5083 5.428253 GGCTGGAATTAATAGGCGATATCA 58.572 41.667 3.12 0.00 0.00 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 1.514443 CGTCTTCGTCTTCTCCGCC 60.514 63.158 0.00 0.00 0.00 6.13
67 68 1.863880 CGCGTCTTCGTCTTCTCCG 60.864 63.158 0.00 0.00 39.49 4.63
68 69 1.514443 CCGCGTCTTCGTCTTCTCC 60.514 63.158 4.92 0.00 39.49 3.71
69 70 2.153322 GCCGCGTCTTCGTCTTCTC 61.153 63.158 4.92 0.00 39.49 2.87
70 71 2.126424 GCCGCGTCTTCGTCTTCT 60.126 61.111 4.92 0.00 39.49 2.85
78 79 4.436998 CTTCCTCGGCCGCGTCTT 62.437 66.667 23.51 0.00 0.00 3.01
88 89 4.493747 GACCGGGCGTCTTCCTCG 62.494 72.222 6.32 0.00 38.57 4.63
101 102 4.530857 GATGACCCCAGCCGACCG 62.531 72.222 0.00 0.00 0.00 4.79
102 103 4.530857 CGATGACCCCAGCCGACC 62.531 72.222 0.00 0.00 0.00 4.79
108 109 4.873129 CGTCGGCGATGACCCCAG 62.873 72.222 24.11 0.00 41.33 4.45
110 111 4.570663 CTCGTCGGCGATGACCCC 62.571 72.222 26.63 5.25 46.80 4.95
112 113 4.194720 AGCTCGTCGGCGATGACC 62.195 66.667 26.63 20.49 46.80 4.02
113 114 2.652496 GAGCTCGTCGGCGATGAC 60.652 66.667 26.63 21.51 46.80 3.06
114 115 4.237809 CGAGCTCGTCGGCGATGA 62.238 66.667 28.10 28.10 46.80 2.92
135 136 4.720902 CACTGCCGGGCCACATGA 62.721 66.667 17.97 0.00 0.00 3.07
147 148 0.104671 AAACATGTTGTGGGCACTGC 59.895 50.000 12.82 0.00 0.00 4.40
149 150 1.484038 ACAAACATGTTGTGGGCACT 58.516 45.000 12.82 0.00 0.00 4.40
150 151 1.932511 CAACAAACATGTTGTGGGCAC 59.067 47.619 12.82 0.00 42.87 5.01
151 152 2.306341 CAACAAACATGTTGTGGGCA 57.694 45.000 12.82 0.00 42.87 5.36
158 159 6.200665 GTGCATGTCATTACAACAAACATGTT 59.799 34.615 4.92 4.92 45.61 2.71
161 162 5.840715 TGTGCATGTCATTACAACAAACAT 58.159 33.333 0.00 0.00 39.58 2.71
162 163 5.254339 TGTGCATGTCATTACAACAAACA 57.746 34.783 0.00 0.00 39.58 2.83
163 164 6.768029 ATTGTGCATGTCATTACAACAAAC 57.232 33.333 12.33 0.00 37.39 2.93
164 165 8.877808 TTTATTGTGCATGTCATTACAACAAA 57.122 26.923 12.33 11.15 37.39 2.83
165 166 8.877808 TTTTATTGTGCATGTCATTACAACAA 57.122 26.923 12.33 6.85 39.58 2.83
166 167 7.116090 GCTTTTATTGTGCATGTCATTACAACA 59.884 33.333 12.33 1.89 39.58 3.33
168 169 7.150640 TGCTTTTATTGTGCATGTCATTACAA 58.849 30.769 12.42 12.42 39.58 2.41
169 170 6.685657 TGCTTTTATTGTGCATGTCATTACA 58.314 32.000 0.00 0.00 40.69 2.41
170 171 7.579589 TTGCTTTTATTGTGCATGTCATTAC 57.420 32.000 0.00 0.00 36.55 1.89
171 172 8.599055 TTTTGCTTTTATTGTGCATGTCATTA 57.401 26.923 0.00 0.00 36.55 1.90
172 173 7.493743 TTTTGCTTTTATTGTGCATGTCATT 57.506 28.000 0.00 0.00 36.55 2.57
173 174 7.493743 TTTTTGCTTTTATTGTGCATGTCAT 57.506 28.000 0.00 0.00 36.55 3.06
174 175 6.915544 TTTTTGCTTTTATTGTGCATGTCA 57.084 29.167 0.00 0.00 36.55 3.58
202 203 8.953313 CGTCCCTTTAATAGGTTGTATCTTTTT 58.047 33.333 0.00 0.00 43.07 1.94
203 204 8.323567 TCGTCCCTTTAATAGGTTGTATCTTTT 58.676 33.333 0.00 0.00 43.07 2.27
204 205 7.767659 GTCGTCCCTTTAATAGGTTGTATCTTT 59.232 37.037 0.00 0.00 43.07 2.52
205 206 7.125356 AGTCGTCCCTTTAATAGGTTGTATCTT 59.875 37.037 0.00 0.00 43.07 2.40
208 209 6.381994 TCAGTCGTCCCTTTAATAGGTTGTAT 59.618 38.462 0.00 0.00 43.07 2.29
210 211 4.529377 TCAGTCGTCCCTTTAATAGGTTGT 59.471 41.667 0.00 0.00 43.07 3.32
212 213 5.750352 TTCAGTCGTCCCTTTAATAGGTT 57.250 39.130 0.00 0.00 43.07 3.50
213 214 5.750352 TTTCAGTCGTCCCTTTAATAGGT 57.250 39.130 0.00 0.00 43.07 3.08
215 216 8.494016 AAGAATTTCAGTCGTCCCTTTAATAG 57.506 34.615 0.00 0.00 0.00 1.73
216 217 8.857694 AAAGAATTTCAGTCGTCCCTTTAATA 57.142 30.769 0.00 0.00 27.08 0.98
217 218 7.761038 AAAGAATTTCAGTCGTCCCTTTAAT 57.239 32.000 0.00 0.00 27.08 1.40
219 220 6.206048 GGAAAAGAATTTCAGTCGTCCCTTTA 59.794 38.462 0.00 0.00 45.53 1.85
220 221 5.009710 GGAAAAGAATTTCAGTCGTCCCTTT 59.990 40.000 0.00 0.00 45.53 3.11
222 223 4.072839 GGAAAAGAATTTCAGTCGTCCCT 58.927 43.478 0.00 0.00 45.53 4.20
223 224 3.818773 TGGAAAAGAATTTCAGTCGTCCC 59.181 43.478 0.00 0.00 45.53 4.46
225 226 4.320275 GGGTGGAAAAGAATTTCAGTCGTC 60.320 45.833 0.00 0.00 45.53 4.20
226 227 3.568430 GGGTGGAAAAGAATTTCAGTCGT 59.432 43.478 0.00 0.00 45.53 4.34
227 228 3.057526 GGGGTGGAAAAGAATTTCAGTCG 60.058 47.826 0.00 0.00 45.53 4.18
228 229 3.895041 TGGGGTGGAAAAGAATTTCAGTC 59.105 43.478 0.00 0.00 45.53 3.51
229 230 3.897505 CTGGGGTGGAAAAGAATTTCAGT 59.102 43.478 0.00 0.00 45.53 3.41
231 232 4.151883 CTCTGGGGTGGAAAAGAATTTCA 58.848 43.478 0.00 0.00 45.53 2.69
233 234 4.199002 ACTCTGGGGTGGAAAAGAATTT 57.801 40.909 0.00 0.00 42.41 1.82
234 235 3.903530 ACTCTGGGGTGGAAAAGAATT 57.096 42.857 0.00 0.00 0.00 2.17
235 236 5.162980 ACTTTACTCTGGGGTGGAAAAGAAT 60.163 40.000 0.00 0.00 0.00 2.40
236 237 4.167307 ACTTTACTCTGGGGTGGAAAAGAA 59.833 41.667 0.00 0.00 0.00 2.52
238 239 4.100279 ACTTTACTCTGGGGTGGAAAAG 57.900 45.455 0.00 0.00 0.00 2.27
239 240 4.529716 AACTTTACTCTGGGGTGGAAAA 57.470 40.909 0.00 0.00 0.00 2.29
241 242 3.008704 GCTAACTTTACTCTGGGGTGGAA 59.991 47.826 0.00 0.00 0.00 3.53
242 243 2.570302 GCTAACTTTACTCTGGGGTGGA 59.430 50.000 0.00 0.00 0.00 4.02
243 244 2.677037 CGCTAACTTTACTCTGGGGTGG 60.677 54.545 0.00 0.00 0.00 4.61
245 246 1.066358 GCGCTAACTTTACTCTGGGGT 60.066 52.381 0.00 0.00 0.00 4.95
247 248 1.066430 TGGCGCTAACTTTACTCTGGG 60.066 52.381 7.64 0.00 0.00 4.45
251 252 1.397343 GCCTTGGCGCTAACTTTACTC 59.603 52.381 7.64 0.00 0.00 2.59
252 253 1.271163 TGCCTTGGCGCTAACTTTACT 60.271 47.619 7.64 0.00 0.00 2.24
253 254 1.161843 TGCCTTGGCGCTAACTTTAC 58.838 50.000 7.64 0.00 0.00 2.01
254 255 1.538075 GTTGCCTTGGCGCTAACTTTA 59.462 47.619 7.64 0.00 0.00 1.85
255 256 0.313987 GTTGCCTTGGCGCTAACTTT 59.686 50.000 7.64 0.00 0.00 2.66
256 257 1.524008 GGTTGCCTTGGCGCTAACTT 61.524 55.000 7.64 0.00 0.00 2.66
257 258 1.971695 GGTTGCCTTGGCGCTAACT 60.972 57.895 7.64 0.00 0.00 2.24
258 259 2.566529 GGTTGCCTTGGCGCTAAC 59.433 61.111 7.64 6.04 0.00 2.34
260 261 4.733542 GGGGTTGCCTTGGCGCTA 62.734 66.667 7.64 0.00 0.00 4.26
265 266 2.283173 GTCCTGGGGTTGCCTTGG 60.283 66.667 0.00 0.00 0.00 3.61
266 267 2.672996 CGTCCTGGGGTTGCCTTG 60.673 66.667 0.00 0.00 0.00 3.61
267 268 4.660938 GCGTCCTGGGGTTGCCTT 62.661 66.667 0.00 0.00 0.00 4.35
271 272 4.410400 GGAGGCGTCCTGGGGTTG 62.410 72.222 18.26 0.00 40.17 3.77
287 288 0.817634 TTCAGACGTTGTGCCCAAGG 60.818 55.000 0.00 0.00 41.18 3.61
288 289 0.588252 CTTCAGACGTTGTGCCCAAG 59.412 55.000 0.00 0.00 0.00 3.61
290 291 0.396435 ATCTTCAGACGTTGTGCCCA 59.604 50.000 0.00 0.00 0.00 5.36
291 292 0.798776 CATCTTCAGACGTTGTGCCC 59.201 55.000 0.00 0.00 0.00 5.36
292 293 0.166814 GCATCTTCAGACGTTGTGCC 59.833 55.000 0.00 0.00 0.00 5.01
293 294 1.127582 GAGCATCTTCAGACGTTGTGC 59.872 52.381 0.00 0.00 0.00 4.57
311 312 5.854010 TCTAATGTGGGTGCTAGTAAGAG 57.146 43.478 0.00 0.00 0.00 2.85
312 313 6.808321 ATTCTAATGTGGGTGCTAGTAAGA 57.192 37.500 0.00 0.00 0.00 2.10
314 315 8.154856 GGATTATTCTAATGTGGGTGCTAGTAA 58.845 37.037 0.00 0.00 0.00 2.24
316 317 6.101150 TGGATTATTCTAATGTGGGTGCTAGT 59.899 38.462 0.00 0.00 0.00 2.57
318 319 6.508030 TGGATTATTCTAATGTGGGTGCTA 57.492 37.500 0.00 0.00 0.00 3.49
319 320 5.387113 TGGATTATTCTAATGTGGGTGCT 57.613 39.130 0.00 0.00 0.00 4.40
320 321 6.463995 TTTGGATTATTCTAATGTGGGTGC 57.536 37.500 0.00 0.00 0.00 5.01
352 2786 4.060900 CGTGCTGGCTATTTCTATCACAT 58.939 43.478 0.00 0.00 0.00 3.21
493 2937 9.822185 GTACTCCCTCGTCCTAAAATATAAAAA 57.178 33.333 0.00 0.00 0.00 1.94
494 2938 9.205513 AGTACTCCCTCGTCCTAAAATATAAAA 57.794 33.333 0.00 0.00 0.00 1.52
495 2939 8.773033 AGTACTCCCTCGTCCTAAAATATAAA 57.227 34.615 0.00 0.00 0.00 1.40
498 2942 9.460019 GTATAGTACTCCCTCGTCCTAAAATAT 57.540 37.037 0.00 0.00 0.00 1.28
499 2943 8.664079 AGTATAGTACTCCCTCGTCCTAAAATA 58.336 37.037 0.00 0.00 32.47 1.40
500 2944 7.525165 AGTATAGTACTCCCTCGTCCTAAAAT 58.475 38.462 0.00 0.00 32.47 1.82
501 2945 6.904626 AGTATAGTACTCCCTCGTCCTAAAA 58.095 40.000 0.00 0.00 32.47 1.52
502 2946 6.506538 AGTATAGTACTCCCTCGTCCTAAA 57.493 41.667 0.00 0.00 32.47 1.85
503 2947 6.554982 TGTAGTATAGTACTCCCTCGTCCTAA 59.445 42.308 16.79 0.00 40.14 2.69
504 2948 6.077993 TGTAGTATAGTACTCCCTCGTCCTA 58.922 44.000 16.79 0.00 40.14 2.94
505 2949 4.904251 TGTAGTATAGTACTCCCTCGTCCT 59.096 45.833 16.79 0.00 40.14 3.85
506 2950 5.011533 TCTGTAGTATAGTACTCCCTCGTCC 59.988 48.000 16.79 0.00 40.14 4.79
507 2951 6.095432 TCTGTAGTATAGTACTCCCTCGTC 57.905 45.833 16.79 0.00 40.14 4.20
508 2952 5.602145 ACTCTGTAGTATAGTACTCCCTCGT 59.398 44.000 16.79 5.14 40.14 4.18
509 2953 6.100404 ACTCTGTAGTATAGTACTCCCTCG 57.900 45.833 16.79 4.65 40.14 4.63
510 2954 8.193953 ACTACTCTGTAGTATAGTACTCCCTC 57.806 42.308 16.79 0.00 40.14 4.30
511 2955 8.431222 CAACTACTCTGTAGTATAGTACTCCCT 58.569 40.741 16.79 0.00 40.14 4.20
512 2956 8.210265 ACAACTACTCTGTAGTATAGTACTCCC 58.790 40.741 16.79 0.00 40.14 4.30
513 2957 9.044150 CACAACTACTCTGTAGTATAGTACTCC 57.956 40.741 16.79 0.00 40.14 3.85
514 2958 9.598517 ACACAACTACTCTGTAGTATAGTACTC 57.401 37.037 16.79 0.00 40.14 2.59
518 2962 9.730705 TTGTACACAACTACTCTGTAGTATAGT 57.269 33.333 10.30 10.75 37.57 2.12
567 3016 3.193691 CCTAATCTAATCATCCGCCGACT 59.806 47.826 0.00 0.00 0.00 4.18
660 3117 0.717784 CGCAGCCTCGTGCATATATG 59.282 55.000 8.45 8.45 44.21 1.78
695 3154 3.119602 TCTCCTTTTCTCACCGTGATACG 60.120 47.826 0.62 0.00 42.11 3.06
729 3188 3.872630 GCCCTTGTCGTCCTTATTTCCTT 60.873 47.826 0.00 0.00 0.00 3.36
732 3191 2.014857 GGCCCTTGTCGTCCTTATTTC 58.985 52.381 0.00 0.00 0.00 2.17
890 3352 1.115467 CAGGTAGAAGATCAGGGCGT 58.885 55.000 0.00 0.00 0.00 5.68
897 3359 1.474143 GCAGGGCACAGGTAGAAGATC 60.474 57.143 0.00 0.00 0.00 2.75
905 3367 4.008933 GTCGAGCAGGGCACAGGT 62.009 66.667 0.00 0.00 0.00 4.00
927 3393 6.594159 ACTGAATTACTAGCAATTTAGCACGT 59.406 34.615 16.37 0.44 35.82 4.49
1272 4105 7.138736 TGCAAGAAACTTAGTTCATGCTAAAC 58.861 34.615 21.39 0.00 46.96 2.01
1273 4106 7.228507 TCTGCAAGAAACTTAGTTCATGCTAAA 59.771 33.333 21.39 10.54 46.96 1.85
1274 4107 6.710295 TCTGCAAGAAACTTAGTTCATGCTAA 59.290 34.615 21.39 12.17 46.96 3.09
1275 4108 6.230472 TCTGCAAGAAACTTAGTTCATGCTA 58.770 36.000 21.39 12.40 46.96 3.49
1276 4109 5.065914 TCTGCAAGAAACTTAGTTCATGCT 58.934 37.500 21.39 7.30 46.96 3.79
1277 4110 5.362556 TCTGCAAGAAACTTAGTTCATGC 57.637 39.130 17.10 17.10 47.00 4.06
1316 4149 1.140252 AGGCGTTGGTCACTGTTAACT 59.860 47.619 7.22 0.00 0.00 2.24
1341 4178 8.360390 GGGACAAAAACATACTTTTCTCTTCAT 58.640 33.333 0.00 0.00 0.00 2.57
1346 4183 7.272037 TCAGGGACAAAAACATACTTTTCTC 57.728 36.000 0.00 0.00 0.00 2.87
1347 4184 7.654022 TTCAGGGACAAAAACATACTTTTCT 57.346 32.000 0.00 0.00 0.00 2.52
1348 4185 8.887036 AATTCAGGGACAAAAACATACTTTTC 57.113 30.769 0.00 0.00 0.00 2.29
1349 4186 9.679661 AAAATTCAGGGACAAAAACATACTTTT 57.320 25.926 0.00 0.00 0.00 2.27
1351 4188 9.325198 GAAAAATTCAGGGACAAAAACATACTT 57.675 29.630 0.00 0.00 0.00 2.24
1352 4189 7.931407 GGAAAAATTCAGGGACAAAAACATACT 59.069 33.333 0.00 0.00 0.00 2.12
1353 4190 7.713073 TGGAAAAATTCAGGGACAAAAACATAC 59.287 33.333 0.00 0.00 0.00 2.39
1355 4192 6.657875 TGGAAAAATTCAGGGACAAAAACAT 58.342 32.000 0.00 0.00 0.00 2.71
1356 4193 6.054860 TGGAAAAATTCAGGGACAAAAACA 57.945 33.333 0.00 0.00 0.00 2.83
1357 4194 6.993786 TTGGAAAAATTCAGGGACAAAAAC 57.006 33.333 0.00 0.00 0.00 2.43
1359 4196 8.586879 ATTTTTGGAAAAATTCAGGGACAAAA 57.413 26.923 4.56 0.00 43.91 2.44
1360 4197 9.859152 ATATTTTTGGAAAAATTCAGGGACAAA 57.141 25.926 13.76 0.00 43.91 2.83
1372 4209 8.590204 GGGACCAAGTCTATATTTTTGGAAAAA 58.410 33.333 8.93 0.00 42.05 1.94
1374 4211 7.475299 AGGGACCAAGTCTATATTTTTGGAAA 58.525 34.615 8.93 0.00 42.05 3.13
1375 4212 7.039722 AGGGACCAAGTCTATATTTTTGGAA 57.960 36.000 8.93 0.00 42.05 3.53
1376 4213 6.652205 AGGGACCAAGTCTATATTTTTGGA 57.348 37.500 8.93 0.00 42.05 3.53
1377 4214 8.817092 TTAAGGGACCAAGTCTATATTTTTGG 57.183 34.615 0.00 0.82 44.38 3.28
1407 4244 9.762381 ACTTGAAGGACCAAATATATACCAAAA 57.238 29.630 0.00 0.00 0.00 2.44
1408 4245 9.403583 GACTTGAAGGACCAAATATATACCAAA 57.596 33.333 0.00 0.00 0.00 3.28
1409 4246 8.778059 AGACTTGAAGGACCAAATATATACCAA 58.222 33.333 0.00 0.00 0.00 3.67
1410 4247 8.331931 AGACTTGAAGGACCAAATATATACCA 57.668 34.615 0.00 0.00 0.00 3.25
1411 4248 8.429641 TGAGACTTGAAGGACCAAATATATACC 58.570 37.037 0.00 0.00 0.00 2.73
1412 4249 9.832445 TTGAGACTTGAAGGACCAAATATATAC 57.168 33.333 0.00 0.00 0.00 1.47
1414 4251 9.753674 TTTTGAGACTTGAAGGACCAAATATAT 57.246 29.630 0.00 0.00 0.00 0.86
1415 4252 9.010029 GTTTTGAGACTTGAAGGACCAAATATA 57.990 33.333 0.00 0.00 0.00 0.86
1416 4253 7.725844 AGTTTTGAGACTTGAAGGACCAAATAT 59.274 33.333 0.00 0.00 0.00 1.28
1417 4254 7.060421 AGTTTTGAGACTTGAAGGACCAAATA 58.940 34.615 0.00 0.00 0.00 1.40
1418 4255 5.893824 AGTTTTGAGACTTGAAGGACCAAAT 59.106 36.000 0.00 0.00 0.00 2.32
1419 4256 5.261216 AGTTTTGAGACTTGAAGGACCAAA 58.739 37.500 0.00 1.04 0.00 3.28
1420 4257 4.855340 AGTTTTGAGACTTGAAGGACCAA 58.145 39.130 0.00 0.00 0.00 3.67
1421 4258 4.503714 AGTTTTGAGACTTGAAGGACCA 57.496 40.909 0.00 0.00 0.00 4.02
1422 4259 5.612351 ACTAGTTTTGAGACTTGAAGGACC 58.388 41.667 0.00 0.00 0.00 4.46
1423 4260 7.410485 CAAACTAGTTTTGAGACTTGAAGGAC 58.590 38.462 18.25 0.00 46.76 3.85
1424 4261 6.542370 CCAAACTAGTTTTGAGACTTGAAGGA 59.458 38.462 18.25 0.00 46.76 3.36
1425 4262 6.318900 ACCAAACTAGTTTTGAGACTTGAAGG 59.681 38.462 22.44 15.80 46.76 3.46
1426 4263 7.321745 ACCAAACTAGTTTTGAGACTTGAAG 57.678 36.000 22.44 6.67 46.76 3.02
1427 4264 6.317893 GGACCAAACTAGTTTTGAGACTTGAA 59.682 38.462 22.44 0.00 46.76 2.69
1428 4265 5.820947 GGACCAAACTAGTTTTGAGACTTGA 59.179 40.000 22.44 0.00 46.76 3.02
1429 4266 5.588648 TGGACCAAACTAGTTTTGAGACTTG 59.411 40.000 22.44 9.07 46.76 3.16
1430 4267 5.751586 TGGACCAAACTAGTTTTGAGACTT 58.248 37.500 22.44 3.34 46.76 3.01
1431 4268 5.367945 TGGACCAAACTAGTTTTGAGACT 57.632 39.130 22.44 3.67 46.76 3.24
1432 4269 6.445357 TTTGGACCAAACTAGTTTTGAGAC 57.555 37.500 22.44 12.80 46.76 3.36
1433 4270 6.127563 GGTTTTGGACCAAACTAGTTTTGAGA 60.128 38.462 22.44 6.19 46.76 3.27
1434 4271 6.040247 GGTTTTGGACCAAACTAGTTTTGAG 58.960 40.000 22.44 14.81 46.76 3.02
1435 4272 5.968254 GGTTTTGGACCAAACTAGTTTTGA 58.032 37.500 22.44 0.00 46.76 2.69
1453 4290 4.111916 CAACGTGCTCAAAATCTGGTTTT 58.888 39.130 0.00 0.00 40.59 2.43
1454 4291 3.380004 TCAACGTGCTCAAAATCTGGTTT 59.620 39.130 0.00 0.00 0.00 3.27
1455 4292 2.948979 TCAACGTGCTCAAAATCTGGTT 59.051 40.909 0.00 0.00 0.00 3.67
1456 4293 2.290641 GTCAACGTGCTCAAAATCTGGT 59.709 45.455 0.00 0.00 0.00 4.00
1457 4294 2.350772 GGTCAACGTGCTCAAAATCTGG 60.351 50.000 0.00 0.00 0.00 3.86
1458 4295 2.662791 CGGTCAACGTGCTCAAAATCTG 60.663 50.000 0.00 0.00 37.93 2.90
1459 4296 1.531149 CGGTCAACGTGCTCAAAATCT 59.469 47.619 0.00 0.00 37.93 2.40
1460 4297 1.399727 CCGGTCAACGTGCTCAAAATC 60.400 52.381 0.00 0.00 42.24 2.17
1461 4298 0.591170 CCGGTCAACGTGCTCAAAAT 59.409 50.000 0.00 0.00 42.24 1.82
1462 4299 1.440938 CCCGGTCAACGTGCTCAAAA 61.441 55.000 0.00 0.00 42.24 2.44
1463 4300 1.890041 CCCGGTCAACGTGCTCAAA 60.890 57.895 0.00 0.00 42.24 2.69
1464 4301 2.280524 CCCGGTCAACGTGCTCAA 60.281 61.111 0.00 0.00 42.24 3.02
1465 4302 4.308458 CCCCGGTCAACGTGCTCA 62.308 66.667 0.00 0.00 42.24 4.26
1466 4303 3.819877 AACCCCGGTCAACGTGCTC 62.820 63.158 0.00 0.00 42.24 4.26
1467 4304 3.409605 AAACCCCGGTCAACGTGCT 62.410 57.895 0.00 0.00 42.24 4.40
1468 4305 2.903350 AAACCCCGGTCAACGTGC 60.903 61.111 0.00 0.00 42.24 5.34
1469 4306 1.524165 TCAAACCCCGGTCAACGTG 60.524 57.895 0.00 0.00 42.24 4.49
1470 4307 1.524393 GTCAAACCCCGGTCAACGT 60.524 57.895 0.00 0.00 42.24 3.99
1471 4308 2.255881 GGTCAAACCCCGGTCAACG 61.256 63.158 0.00 0.00 43.80 4.10
1472 4309 0.538746 ATGGTCAAACCCCGGTCAAC 60.539 55.000 0.00 0.00 37.50 3.18
1473 4310 0.538516 CATGGTCAAACCCCGGTCAA 60.539 55.000 0.00 0.00 37.50 3.18
1474 4311 1.074072 CATGGTCAAACCCCGGTCA 59.926 57.895 0.00 0.00 37.50 4.02
1475 4312 0.538746 AACATGGTCAAACCCCGGTC 60.539 55.000 0.00 0.00 37.50 4.79
1476 4313 0.825840 CAACATGGTCAAACCCCGGT 60.826 55.000 0.00 0.00 37.50 5.28
1477 4314 0.538516 TCAACATGGTCAAACCCCGG 60.539 55.000 0.00 0.00 37.50 5.73
1478 4315 0.596082 GTCAACATGGTCAAACCCCG 59.404 55.000 0.00 0.00 37.50 5.73
1479 4316 0.966179 GGTCAACATGGTCAAACCCC 59.034 55.000 0.00 0.00 37.50 4.95
1480 4317 1.613437 CTGGTCAACATGGTCAAACCC 59.387 52.381 0.00 0.00 37.50 4.11
1481 4318 1.613437 CCTGGTCAACATGGTCAAACC 59.387 52.381 0.00 0.00 39.22 3.27
1482 4319 2.306847 ACCTGGTCAACATGGTCAAAC 58.693 47.619 0.00 0.00 0.00 2.93
1483 4320 2.746279 ACCTGGTCAACATGGTCAAA 57.254 45.000 0.00 0.00 0.00 2.69
1484 4321 2.692557 CAAACCTGGTCAACATGGTCAA 59.307 45.455 0.00 0.00 31.94 3.18
1485 4322 2.092158 TCAAACCTGGTCAACATGGTCA 60.092 45.455 0.00 0.00 31.94 4.02
1486 4323 2.293399 GTCAAACCTGGTCAACATGGTC 59.707 50.000 0.00 0.00 31.94 4.02
1487 4324 2.306847 GTCAAACCTGGTCAACATGGT 58.693 47.619 0.00 0.00 33.73 3.55
1488 4325 1.613437 GGTCAAACCTGGTCAACATGG 59.387 52.381 0.00 0.00 34.73 3.66
1489 4326 1.266718 CGGTCAAACCTGGTCAACATG 59.733 52.381 0.00 0.00 35.66 3.21
1490 4327 1.142060 TCGGTCAAACCTGGTCAACAT 59.858 47.619 0.00 0.00 35.66 2.71
1491 4328 0.542333 TCGGTCAAACCTGGTCAACA 59.458 50.000 0.00 0.00 35.66 3.33
1492 4329 1.892209 ATCGGTCAAACCTGGTCAAC 58.108 50.000 0.00 0.00 35.66 3.18
1493 4330 3.773418 TTATCGGTCAAACCTGGTCAA 57.227 42.857 0.00 0.00 35.66 3.18
1494 4331 3.181453 TGTTTATCGGTCAAACCTGGTCA 60.181 43.478 0.00 0.00 35.66 4.02
1495 4332 3.404899 TGTTTATCGGTCAAACCTGGTC 58.595 45.455 0.00 0.00 35.66 4.02
1496 4333 3.495434 TGTTTATCGGTCAAACCTGGT 57.505 42.857 0.00 0.00 35.66 4.00
1497 4334 6.503589 TTATTGTTTATCGGTCAAACCTGG 57.496 37.500 0.00 0.00 35.66 4.45
1498 4335 8.980143 AATTTATTGTTTATCGGTCAAACCTG 57.020 30.769 0.00 0.00 35.66 4.00
1499 4336 9.990360 AAAATTTATTGTTTATCGGTCAAACCT 57.010 25.926 0.00 0.00 35.66 3.50
1549 4386 8.558973 TGGTTGTCACAAAATTTCAGATTTTT 57.441 26.923 0.00 0.00 0.00 1.94
1550 4387 8.450180 GTTGGTTGTCACAAAATTTCAGATTTT 58.550 29.630 0.00 0.00 0.00 1.82
1551 4388 7.605691 TGTTGGTTGTCACAAAATTTCAGATTT 59.394 29.630 0.00 0.00 0.00 2.17
1552 4389 7.102346 TGTTGGTTGTCACAAAATTTCAGATT 58.898 30.769 0.00 0.00 0.00 2.40
1553 4390 6.638610 TGTTGGTTGTCACAAAATTTCAGAT 58.361 32.000 0.00 0.00 0.00 2.90
1554 4391 6.030548 TGTTGGTTGTCACAAAATTTCAGA 57.969 33.333 0.00 0.00 0.00 3.27
1555 4392 6.707711 CATGTTGGTTGTCACAAAATTTCAG 58.292 36.000 0.00 0.00 0.00 3.02
1556 4393 5.064452 GCATGTTGGTTGTCACAAAATTTCA 59.936 36.000 0.00 0.00 0.00 2.69
1557 4394 5.294060 AGCATGTTGGTTGTCACAAAATTTC 59.706 36.000 0.00 0.00 0.00 2.17
1558 4395 5.184711 AGCATGTTGGTTGTCACAAAATTT 58.815 33.333 0.00 0.00 0.00 1.82
1559 4396 4.768583 AGCATGTTGGTTGTCACAAAATT 58.231 34.783 0.00 0.00 0.00 1.82
1560 4397 4.405116 AGCATGTTGGTTGTCACAAAAT 57.595 36.364 0.00 0.00 0.00 1.82
1561 4398 3.883830 AGCATGTTGGTTGTCACAAAA 57.116 38.095 0.00 0.00 0.00 2.44
1562 4399 3.883830 AAGCATGTTGGTTGTCACAAA 57.116 38.095 0.00 0.00 36.63 2.83
1570 4407 4.470334 AGTTTTCACAAGCATGTTGGTT 57.530 36.364 11.15 0.00 37.82 3.67
1571 4408 4.499696 GCTAGTTTTCACAAGCATGTTGGT 60.500 41.667 11.15 0.00 37.82 3.67
1572 4409 3.983344 GCTAGTTTTCACAAGCATGTTGG 59.017 43.478 11.15 0.00 37.82 3.77
1573 4410 4.609947 TGCTAGTTTTCACAAGCATGTTG 58.390 39.130 0.00 0.53 39.92 3.33
1574 4411 4.916983 TGCTAGTTTTCACAAGCATGTT 57.083 36.364 0.00 0.00 39.92 2.71
1579 4416 3.565905 AGCATGCTAGTTTTCACAAGC 57.434 42.857 21.21 0.00 35.51 4.01
1580 4417 5.978919 TCAAAAGCATGCTAGTTTTCACAAG 59.021 36.000 23.00 6.02 0.00 3.16
1581 4418 5.900425 TCAAAAGCATGCTAGTTTTCACAA 58.100 33.333 23.00 1.03 0.00 3.33
1582 4419 5.512753 TCAAAAGCATGCTAGTTTTCACA 57.487 34.783 23.00 1.74 0.00 3.58
1583 4420 7.412137 AATTCAAAAGCATGCTAGTTTTCAC 57.588 32.000 23.00 0.00 0.00 3.18
1584 4421 8.977505 GTAAATTCAAAAGCATGCTAGTTTTCA 58.022 29.630 23.00 1.02 0.00 2.69
1585 4422 9.196552 AGTAAATTCAAAAGCATGCTAGTTTTC 57.803 29.630 23.00 11.82 0.00 2.29
1586 4423 8.981647 CAGTAAATTCAAAAGCATGCTAGTTTT 58.018 29.630 23.00 15.25 0.00 2.43
1587 4424 8.143835 ACAGTAAATTCAAAAGCATGCTAGTTT 58.856 29.630 23.00 16.03 0.00 2.66
1588 4425 7.661040 ACAGTAAATTCAAAAGCATGCTAGTT 58.339 30.769 23.00 15.49 0.00 2.24
1589 4426 7.219484 ACAGTAAATTCAAAAGCATGCTAGT 57.781 32.000 23.00 9.53 0.00 2.57
1590 4427 7.809331 TGAACAGTAAATTCAAAAGCATGCTAG 59.191 33.333 23.00 14.23 33.16 3.42
1591 4428 7.656412 TGAACAGTAAATTCAAAAGCATGCTA 58.344 30.769 23.00 4.84 33.16 3.49
1592 4429 6.514947 TGAACAGTAAATTCAAAAGCATGCT 58.485 32.000 16.30 16.30 33.16 3.79
1593 4430 6.768029 TGAACAGTAAATTCAAAAGCATGC 57.232 33.333 10.51 10.51 33.16 4.06
1594 4431 8.523523 TGATGAACAGTAAATTCAAAAGCATG 57.476 30.769 0.00 0.00 39.43 4.06
1595 4432 9.715121 AATGATGAACAGTAAATTCAAAAGCAT 57.285 25.926 0.00 0.00 39.43 3.79
1596 4433 9.195411 GAATGATGAACAGTAAATTCAAAAGCA 57.805 29.630 0.00 0.00 39.43 3.91
1597 4434 9.195411 TGAATGATGAACAGTAAATTCAAAAGC 57.805 29.630 0.00 0.00 39.43 3.51
1601 4438 9.474920 GGTTTGAATGATGAACAGTAAATTCAA 57.525 29.630 4.90 4.90 39.43 2.69
1602 4439 8.859090 AGGTTTGAATGATGAACAGTAAATTCA 58.141 29.630 0.00 0.00 40.25 2.57
1603 4440 9.132521 CAGGTTTGAATGATGAACAGTAAATTC 57.867 33.333 0.00 0.00 0.00 2.17
1604 4441 8.090214 CCAGGTTTGAATGATGAACAGTAAATT 58.910 33.333 0.00 0.00 0.00 1.82
1605 4442 7.233348 ACCAGGTTTGAATGATGAACAGTAAAT 59.767 33.333 0.00 0.00 0.00 1.40
1606 4443 6.549364 ACCAGGTTTGAATGATGAACAGTAAA 59.451 34.615 0.00 0.00 0.00 2.01
1607 4444 6.068010 ACCAGGTTTGAATGATGAACAGTAA 58.932 36.000 0.00 0.00 0.00 2.24
1608 4445 5.630121 ACCAGGTTTGAATGATGAACAGTA 58.370 37.500 0.00 0.00 0.00 2.74
1609 4446 4.473444 ACCAGGTTTGAATGATGAACAGT 58.527 39.130 0.00 0.00 0.00 3.55
1610 4447 4.520111 TGACCAGGTTTGAATGATGAACAG 59.480 41.667 0.00 0.00 0.00 3.16
1611 4448 4.468713 TGACCAGGTTTGAATGATGAACA 58.531 39.130 0.00 0.00 0.00 3.18
1612 4449 5.222631 GTTGACCAGGTTTGAATGATGAAC 58.777 41.667 0.00 0.00 0.00 3.18
1613 4450 4.023279 CGTTGACCAGGTTTGAATGATGAA 60.023 41.667 0.00 0.00 0.00 2.57
1614 4451 3.501828 CGTTGACCAGGTTTGAATGATGA 59.498 43.478 0.00 0.00 0.00 2.92
1615 4452 3.253188 ACGTTGACCAGGTTTGAATGATG 59.747 43.478 0.00 0.00 0.00 3.07
1616 4453 3.253188 CACGTTGACCAGGTTTGAATGAT 59.747 43.478 0.00 0.00 0.00 2.45
1617 4454 2.616376 CACGTTGACCAGGTTTGAATGA 59.384 45.455 0.00 0.00 0.00 2.57
1618 4455 2.287547 CCACGTTGACCAGGTTTGAATG 60.288 50.000 0.00 0.00 0.00 2.67
1619 4456 1.953686 CCACGTTGACCAGGTTTGAAT 59.046 47.619 0.00 0.00 0.00 2.57
1620 4457 1.340211 ACCACGTTGACCAGGTTTGAA 60.340 47.619 0.00 0.00 0.00 2.69
1621 4458 0.253610 ACCACGTTGACCAGGTTTGA 59.746 50.000 0.00 0.00 0.00 2.69
1622 4459 0.661020 GACCACGTTGACCAGGTTTG 59.339 55.000 0.00 0.00 33.77 2.93
1623 4460 0.253610 TGACCACGTTGACCAGGTTT 59.746 50.000 0.00 0.00 33.77 3.27
1624 4461 0.253610 TTGACCACGTTGACCAGGTT 59.746 50.000 0.00 0.00 33.77 3.50
1625 4462 0.253610 TTTGACCACGTTGACCAGGT 59.746 50.000 0.00 0.00 37.00 4.00
1626 4463 0.661020 GTTTGACCACGTTGACCAGG 59.339 55.000 0.00 0.00 0.00 4.45
1627 4464 0.661020 GGTTTGACCACGTTGACCAG 59.339 55.000 0.00 0.00 38.42 4.00
1628 4465 0.748729 GGGTTTGACCACGTTGACCA 60.749 55.000 0.00 0.00 41.02 4.02
1629 4466 1.778027 CGGGTTTGACCACGTTGACC 61.778 60.000 0.00 0.00 41.02 4.02
1630 4467 1.644913 CGGGTTTGACCACGTTGAC 59.355 57.895 0.00 0.00 41.02 3.18
1631 4468 1.524165 CCGGGTTTGACCACGTTGA 60.524 57.895 0.00 0.00 41.02 3.18
1632 4469 1.778027 GACCGGGTTTGACCACGTTG 61.778 60.000 6.32 0.00 41.02 4.10
1633 4470 1.524393 GACCGGGTTTGACCACGTT 60.524 57.895 6.32 0.00 41.02 3.99
1634 4471 2.109593 GACCGGGTTTGACCACGT 59.890 61.111 6.32 0.00 41.02 4.49
1635 4472 1.524165 TTGACCGGGTTTGACCACG 60.524 57.895 6.32 0.92 41.02 4.94
1636 4473 0.748729 TGTTGACCGGGTTTGACCAC 60.749 55.000 6.32 0.00 41.02 4.16
1637 4474 0.183971 ATGTTGACCGGGTTTGACCA 59.816 50.000 6.32 0.00 41.02 4.02
1638 4475 0.596082 CATGTTGACCGGGTTTGACC 59.404 55.000 6.32 0.00 37.60 4.02
1639 4476 0.039527 GCATGTTGACCGGGTTTGAC 60.040 55.000 6.32 1.31 0.00 3.18
1640 4477 0.179004 AGCATGTTGACCGGGTTTGA 60.179 50.000 6.32 0.00 0.00 2.69
1641 4478 0.673437 AAGCATGTTGACCGGGTTTG 59.327 50.000 6.32 0.00 0.00 2.93
1642 4479 2.279935 TAAGCATGTTGACCGGGTTT 57.720 45.000 6.32 0.00 0.00 3.27
1643 4480 2.279935 TTAAGCATGTTGACCGGGTT 57.720 45.000 6.32 0.00 0.00 4.11
1644 4481 2.279935 TTTAAGCATGTTGACCGGGT 57.720 45.000 6.32 0.00 0.00 5.28
1645 4482 3.056891 ACATTTTAAGCATGTTGACCGGG 60.057 43.478 6.32 0.00 30.22 5.73
1646 4483 3.919804 CACATTTTAAGCATGTTGACCGG 59.080 43.478 0.00 0.00 32.25 5.28
1647 4484 3.919804 CCACATTTTAAGCATGTTGACCG 59.080 43.478 0.00 0.00 32.25 4.79
1648 4485 4.881920 ACCACATTTTAAGCATGTTGACC 58.118 39.130 0.00 0.00 32.25 4.02
1649 4486 6.843069 AAACCACATTTTAAGCATGTTGAC 57.157 33.333 0.00 0.00 32.25 3.18
1650 4487 6.259608 CCAAAACCACATTTTAAGCATGTTGA 59.740 34.615 0.00 0.00 38.50 3.18
1651 4488 6.259608 TCCAAAACCACATTTTAAGCATGTTG 59.740 34.615 0.00 1.10 38.50 3.33
1652 4489 6.259829 GTCCAAAACCACATTTTAAGCATGTT 59.740 34.615 0.00 0.00 38.50 2.71
1653 4490 5.757808 GTCCAAAACCACATTTTAAGCATGT 59.242 36.000 0.00 0.00 38.50 3.21
1654 4491 6.226988 GTCCAAAACCACATTTTAAGCATG 57.773 37.500 0.00 0.00 38.50 4.06
1668 4505 4.587262 ACCAGATAAGTTTGGTCCAAAACC 59.413 41.667 18.74 7.67 44.16 3.27
1669 4506 5.784578 ACCAGATAAGTTTGGTCCAAAAC 57.215 39.130 18.74 12.56 44.16 2.43
1670 4507 6.800072 AAACCAGATAAGTTTGGTCCAAAA 57.200 33.333 18.74 4.12 46.67 2.44
1671 4508 6.381420 TCAAAACCAGATAAGTTTGGTCCAAA 59.619 34.615 13.26 13.26 46.67 3.28
1672 4509 5.894393 TCAAAACCAGATAAGTTTGGTCCAA 59.106 36.000 0.00 0.00 46.67 3.53
1673 4510 5.450453 TCAAAACCAGATAAGTTTGGTCCA 58.550 37.500 0.00 0.00 46.67 4.02
1674 4511 5.768164 TCTCAAAACCAGATAAGTTTGGTCC 59.232 40.000 0.00 0.00 46.67 4.46
1675 4512 6.486993 AGTCTCAAAACCAGATAAGTTTGGTC 59.513 38.462 0.00 0.00 46.67 4.02
1677 4514 6.884280 AGTCTCAAAACCAGATAAGTTTGG 57.116 37.500 0.00 0.00 37.50 3.28
1678 4515 7.930217 TCAAGTCTCAAAACCAGATAAGTTTG 58.070 34.615 0.00 0.00 37.50 2.93
1679 4516 8.519799 TTCAAGTCTCAAAACCAGATAAGTTT 57.480 30.769 0.00 0.00 39.07 2.66
1680 4517 7.229506 CCTTCAAGTCTCAAAACCAGATAAGTT 59.770 37.037 0.00 0.00 0.00 2.66
1681 4518 6.712547 CCTTCAAGTCTCAAAACCAGATAAGT 59.287 38.462 0.00 0.00 0.00 2.24
1682 4519 6.936900 TCCTTCAAGTCTCAAAACCAGATAAG 59.063 38.462 0.00 0.00 0.00 1.73
1683 4520 6.710744 GTCCTTCAAGTCTCAAAACCAGATAA 59.289 38.462 0.00 0.00 0.00 1.75
1684 4521 6.231211 GTCCTTCAAGTCTCAAAACCAGATA 58.769 40.000 0.00 0.00 0.00 1.98
1685 4522 5.066593 GTCCTTCAAGTCTCAAAACCAGAT 58.933 41.667 0.00 0.00 0.00 2.90
1686 4523 4.451900 GTCCTTCAAGTCTCAAAACCAGA 58.548 43.478 0.00 0.00 0.00 3.86
1687 4524 3.565902 GGTCCTTCAAGTCTCAAAACCAG 59.434 47.826 0.00 0.00 0.00 4.00
1688 4525 3.053991 TGGTCCTTCAAGTCTCAAAACCA 60.054 43.478 0.00 0.00 32.13 3.67
1689 4526 3.551846 TGGTCCTTCAAGTCTCAAAACC 58.448 45.455 0.00 0.00 0.00 3.27
1690 4527 5.576447 TTTGGTCCTTCAAGTCTCAAAAC 57.424 39.130 0.00 0.00 0.00 2.43
1691 4528 5.656416 ACATTTGGTCCTTCAAGTCTCAAAA 59.344 36.000 0.00 0.00 0.00 2.44
1692 4529 5.200483 ACATTTGGTCCTTCAAGTCTCAAA 58.800 37.500 0.00 0.00 0.00 2.69
1693 4530 4.792068 ACATTTGGTCCTTCAAGTCTCAA 58.208 39.130 0.00 0.00 0.00 3.02
1694 4531 4.437682 ACATTTGGTCCTTCAAGTCTCA 57.562 40.909 0.00 0.00 0.00 3.27
1695 4532 9.832445 TTATATACATTTGGTCCTTCAAGTCTC 57.168 33.333 0.00 0.00 0.00 3.36
1712 4549 9.574516 GGTCCCTCAAGATTGTTTTATATACAT 57.425 33.333 0.00 0.00 0.00 2.29
1713 4550 8.553153 TGGTCCCTCAAGATTGTTTTATATACA 58.447 33.333 0.00 0.00 0.00 2.29
1714 4551 8.974060 TGGTCCCTCAAGATTGTTTTATATAC 57.026 34.615 0.00 0.00 0.00 1.47
1715 4552 9.627123 CTTGGTCCCTCAAGATTGTTTTATATA 57.373 33.333 0.00 0.00 44.98 0.86
1716 4553 8.116026 ACTTGGTCCCTCAAGATTGTTTTATAT 58.884 33.333 10.99 0.00 44.98 0.86
1717 4554 7.466804 ACTTGGTCCCTCAAGATTGTTTTATA 58.533 34.615 10.99 0.00 44.98 0.98
1718 4555 6.314917 ACTTGGTCCCTCAAGATTGTTTTAT 58.685 36.000 10.99 0.00 44.98 1.40
1719 4556 5.701224 ACTTGGTCCCTCAAGATTGTTTTA 58.299 37.500 10.99 0.00 44.98 1.52
1720 4557 4.546674 ACTTGGTCCCTCAAGATTGTTTT 58.453 39.130 10.99 0.00 44.98 2.43
1721 4558 4.141158 AGACTTGGTCCCTCAAGATTGTTT 60.141 41.667 10.99 0.00 44.98 2.83
1722 4559 3.395941 AGACTTGGTCCCTCAAGATTGTT 59.604 43.478 10.99 0.00 44.98 2.83
1723 4560 2.982488 AGACTTGGTCCCTCAAGATTGT 59.018 45.455 10.99 0.00 44.98 2.71
1724 4561 3.244700 ACAGACTTGGTCCCTCAAGATTG 60.245 47.826 10.99 10.14 44.98 2.67
1725 4562 2.982488 ACAGACTTGGTCCCTCAAGATT 59.018 45.455 10.99 0.00 44.98 2.40
1726 4563 2.625639 ACAGACTTGGTCCCTCAAGAT 58.374 47.619 10.99 0.00 44.98 2.40
1727 4564 2.103153 ACAGACTTGGTCCCTCAAGA 57.897 50.000 10.99 0.00 44.98 3.02
1728 4565 2.900546 AGTACAGACTTGGTCCCTCAAG 59.099 50.000 0.00 3.39 46.86 3.02
1729 4566 2.972348 AGTACAGACTTGGTCCCTCAA 58.028 47.619 0.00 0.00 32.18 3.02
1730 4567 2.696526 AGTACAGACTTGGTCCCTCA 57.303 50.000 0.00 0.00 32.18 3.86
1731 4568 4.065789 CAAAAGTACAGACTTGGTCCCTC 58.934 47.826 0.00 0.00 45.50 4.30
1732 4569 3.714798 TCAAAAGTACAGACTTGGTCCCT 59.285 43.478 0.00 0.00 45.50 4.20
1733 4570 4.081322 TCAAAAGTACAGACTTGGTCCC 57.919 45.455 0.00 0.00 45.50 4.46
1734 4571 6.445357 TTTTCAAAAGTACAGACTTGGTCC 57.555 37.500 0.00 0.00 45.50 4.46
1735 4572 7.535997 AGTTTTTCAAAAGTACAGACTTGGTC 58.464 34.615 0.00 0.00 45.50 4.02
1736 4573 7.462571 AGTTTTTCAAAAGTACAGACTTGGT 57.537 32.000 0.00 0.00 45.50 3.67
1737 4574 8.026607 TCAAGTTTTTCAAAAGTACAGACTTGG 58.973 33.333 17.10 5.27 45.50 3.61
1738 4575 8.964420 TCAAGTTTTTCAAAAGTACAGACTTG 57.036 30.769 13.36 13.36 45.50 3.16
1740 4577 7.148069 CCCTCAAGTTTTTCAAAAGTACAGACT 60.148 37.037 0.00 0.00 37.59 3.24
1741 4578 6.972901 CCCTCAAGTTTTTCAAAAGTACAGAC 59.027 38.462 0.00 0.00 31.62 3.51
1742 4579 6.887545 TCCCTCAAGTTTTTCAAAAGTACAGA 59.112 34.615 0.00 0.00 31.62 3.41
1743 4580 6.972901 GTCCCTCAAGTTTTTCAAAAGTACAG 59.027 38.462 0.00 0.00 31.62 2.74
1744 4581 6.127563 GGTCCCTCAAGTTTTTCAAAAGTACA 60.128 38.462 0.00 0.00 31.62 2.90
1745 4582 6.127563 TGGTCCCTCAAGTTTTTCAAAAGTAC 60.128 38.462 0.00 0.00 31.62 2.73
1746 4583 5.952947 TGGTCCCTCAAGTTTTTCAAAAGTA 59.047 36.000 0.00 0.00 31.62 2.24
1747 4584 4.775253 TGGTCCCTCAAGTTTTTCAAAAGT 59.225 37.500 0.00 0.00 33.16 2.66
1748 4585 5.337578 TGGTCCCTCAAGTTTTTCAAAAG 57.662 39.130 0.00 0.00 0.00 2.27
1749 4586 5.746990 TTGGTCCCTCAAGTTTTTCAAAA 57.253 34.783 0.00 0.00 0.00 2.44
1750 4587 5.746990 TTTGGTCCCTCAAGTTTTTCAAA 57.253 34.783 0.00 0.00 0.00 2.69
1751 4588 5.746990 TTTTGGTCCCTCAAGTTTTTCAA 57.253 34.783 0.00 0.00 0.00 2.69
1752 4589 5.012148 TGTTTTTGGTCCCTCAAGTTTTTCA 59.988 36.000 0.00 0.00 0.00 2.69
1753 4590 5.483811 TGTTTTTGGTCCCTCAAGTTTTTC 58.516 37.500 0.00 0.00 0.00 2.29
1754 4591 5.491323 TGTTTTTGGTCCCTCAAGTTTTT 57.509 34.783 0.00 0.00 0.00 1.94
1755 4592 5.692115 ATGTTTTTGGTCCCTCAAGTTTT 57.308 34.783 0.00 0.00 0.00 2.43
1756 4593 5.897250 AGTATGTTTTTGGTCCCTCAAGTTT 59.103 36.000 0.00 0.00 0.00 2.66
1757 4594 5.454966 AGTATGTTTTTGGTCCCTCAAGTT 58.545 37.500 0.00 0.00 0.00 2.66
1758 4595 5.061721 AGTATGTTTTTGGTCCCTCAAGT 57.938 39.130 0.00 0.00 0.00 3.16
1759 4596 6.405278 AAAGTATGTTTTTGGTCCCTCAAG 57.595 37.500 0.00 0.00 0.00 3.02
1760 4597 7.064229 AGTAAAGTATGTTTTTGGTCCCTCAA 58.936 34.615 0.00 0.00 0.00 3.02
1761 4598 6.607019 AGTAAAGTATGTTTTTGGTCCCTCA 58.393 36.000 0.00 0.00 0.00 3.86
1762 4599 7.520451 AAGTAAAGTATGTTTTTGGTCCCTC 57.480 36.000 0.00 0.00 0.00 4.30
1763 4600 7.907841 AAAGTAAAGTATGTTTTTGGTCCCT 57.092 32.000 0.00 0.00 0.00 4.20
1764 4601 8.951787 AAAAAGTAAAGTATGTTTTTGGTCCC 57.048 30.769 0.00 0.00 0.00 4.46
1786 4623 5.511545 GCCTCAGTCTCTAGTTCAGGAAAAA 60.512 44.000 0.00 0.00 0.00 1.94
1787 4624 4.021016 GCCTCAGTCTCTAGTTCAGGAAAA 60.021 45.833 0.00 0.00 0.00 2.29
1788 4625 3.511934 GCCTCAGTCTCTAGTTCAGGAAA 59.488 47.826 0.00 0.00 0.00 3.13
1789 4626 3.093057 GCCTCAGTCTCTAGTTCAGGAA 58.907 50.000 0.00 0.00 0.00 3.36
1790 4627 2.041755 TGCCTCAGTCTCTAGTTCAGGA 59.958 50.000 0.00 0.00 0.00 3.86
1791 4628 2.451490 TGCCTCAGTCTCTAGTTCAGG 58.549 52.381 0.00 0.00 0.00 3.86
1831 4668 7.648039 TGAAGGGCCATAAATAATTTTACGT 57.352 32.000 6.18 0.00 30.33 3.57
1844 4681 5.684704 CTGAGTTAGAAATGAAGGGCCATA 58.315 41.667 6.18 0.00 0.00 2.74
1961 4799 8.967664 TCTAACTAGTCTTCTGTCTTATCTCC 57.032 38.462 0.00 0.00 0.00 3.71
1977 4815 5.470098 CACATGTGCCTGTTTTCTAACTAGT 59.530 40.000 13.94 0.00 35.24 2.57
1993 4831 5.058149 TGAAATGGTATCAACACATGTGC 57.942 39.130 25.68 8.01 0.00 4.57
1999 4837 5.652014 TGGATCCTTGAAATGGTATCAACAC 59.348 40.000 14.23 0.00 33.47 3.32
2001 4839 5.067805 GGTGGATCCTTGAAATGGTATCAAC 59.932 44.000 14.23 0.00 33.47 3.18
2002 4840 5.200483 GGTGGATCCTTGAAATGGTATCAA 58.800 41.667 14.23 0.00 35.60 2.57
2029 4907 3.419264 TGTTGTTGTAACTTGCTGCTG 57.581 42.857 0.00 0.00 0.00 4.41
2090 4968 4.807834 AGTGATTCATAACGCTGAGACATG 59.192 41.667 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.