>input_sequence_86844
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-------------------------------ATGCAGTCTCTGCTACCGCTGTTCCTGAGGCCGGCGGCGCGGTTCTTGG
GGCCGTTCCTGGCAGGCCGGCCGGCGGAGGCGGCGGCCACGATGCTGCACCGCGCCGGCGTGCTCCCGAGGAACAGGGCG
CTGGAGCGGCTCGTGAGG---GACGACGGCGGCGCCGAGGACTGCATCGCGCGTCTCGTCGTCAGCGTGGTGAGCTGCCT
CTGCTAG-------------------------------------------------------------------------
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>chr7B_1_TraesCS7B01G345400
CAGGCGGTCGGCCTCTGGTCCGCCTTGCCGGGGGGTGCGCCGAGCTCGAGCAGCGCGTCGCCGGCGGCGGAGAAGACGAA
GACGCGGCCGAGGAAGACGCCCGGTCGGCTGGGGTCATCGCCGACGAGCTCGAGCTCATGTGGCCCGGCAGTGCCCACAA
CATGTTTGTTGTAATGACATGCACAATAAAAGCAAAAAAGAAAAAAAGATACAACCTATTAAAGGGACGACTGAAATTCT
TTTCCACCCCAGAGTAAAGTTAGCGCCAAGGCAACCCCAGGACGCCTCCTTGGGCACAACGTCTGAAGATGCTCTTACTA
GCACCCACATTAGAATAATC------------------------------------------------------------
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-----------------------------------------------------CAAAATATATTTATGTGATAGAAATAG
CCAGCACGTG---TGCTAGTAGTATTTCGTGTCCTATCAGAGTCCTGCACGAATTA-------TGCATGCATGCAACATA
CTCCCTCTGTCCTAAAATATAAAAATATTTTTGATATTAGCATAGTATTAAAAATATTTTTATATTTTAGGACGAGGGAG
TACTATACTACAGAGTAGTTGTGTACAA-----CTTAGGTTTGCCTAGCAATCAAAGTCGGCGGATGATTAGA-TTAGGA
A-------GTACTAGTGTCCGAGTCTAGTACGAGTCCATATCAGCGTCGGTCAAGTCTAGCCGGATCGTGTGTATACATA
TA--TGCACGAGGCTGCGTGAGTTCTGTACTTTCGTATCACGGTGAGAAAAGGAGAAAAGAAATAAAAAGGAAATAAGGA
C--GACAAGGGCC-TTGGCTATTTGCCATTGCCGGTTGCCACTGCCAGTTGACACCGGCGGCCTTCAATCACGGCGAGCA
GCCCAGCCGGCCAGTCGTCGCGCCTCCTGATCATAGTTCAATGGTACGTGTCAGGCTCGTACTTCGTACCCACGCCCTGA
TCTTCTACCTGTGCCCTG----CTCGACGCATACGTGCTAAATTGCTAGTAATTCAGTGGCTTAAAATTCTTGGCATG--
TGTTGGACTCACGCCGTG----TGCGCTGCAATGCAGTCTCTGCTACCGCTGTTCCTGAGGCCGGCGGCGCGGTTCTTGG
GGCCGTTCCTGGCAGGCCGGCCGGCGGAGGCGGCGGCCACGATGCTGCACCGCGCCGGCGTGCTCCCGAGGAACAGGGCG
CTGGAGCGGCTCGTGAGG---GACGACGGCGGCGCCGAGGACTGCATCGCGCGTCTCGTCGTCAGCGTGGTGAGCTGCCT
CTGCTAGATGGCCA---------GTTGATACACTG--GTTTGGGGATTGAAGTTCTCCACTACTACT-------------
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--------------ACAGGTTTAGGTTTAGCATGAACTAAGTTTCTTGCAGATTAATGCAACTTCATTA----GTTAACA
GTGACCAACGCCTTTTTATGAAGAGAAAAGTATGTTTTTGTCCCTGAATTTTTCCAAAAATATAGACTTGGTCCCTTAAT
ATTTTTTGGTATATATTTGGTCCTTCAAGTCTCAAAACTAGTTTGGTCCAAAACCAGATTTTGAGCACGTTGACCGGGGT
TTGACCATGTTGACCAGGTTTGACCGATAAACAATAAATTTTAAAAAATAGGAAACAAATTAAAAAAAAATCTGAAATTT
TGTGACAACCAACATGCTTGTGAAAACTAGCATGCTTTTGAATTTACTGTTCATCATTCAAACCTGGTCAACGTGGTCAA
ACCCGGTCAACATGCTTAAAATGTGGTTTTGGACCAAACTTATCTGGTTTTGAGACTTGAAGGACCAAATGTATATAAAA
CAATCTTGAGGGACCAAGTCTGTACTTTTGAAAAACTTGAGGGACCAAAAACATACTTTACTTTTTTCCTGAACTAGAGA
CTGAGGCAACTTGTATAAATAGCAAACACGTAAAATTATTTATGGCCCTTCATTTCTAACTCAGCACTCCAAAATATATT
GTCATTATCCATAATTTATAGAGAAAACAAGTAACCAGAAAGGAAA-AAAAAATAAAAGCTCATATTTCCAAATTAAGGG
AGATAAGACAGAAGACTAGTTAGAAAACAGGCACATGTGT----------------------------------------
TGATACCATTTCAAGGATCCACCCATCAGCAGCAAGTTACAACAACAATAACTAATTAAAGCCAGTAACCATATGGCAGT
GAAAATGCATGTCTCAGCGTTATG-AATCACTAACCAAATTGTGCCGGGCTCTCCTTGAGCCTTCTGCCTAAAACCAAAT
TGTATTATTTTACAGATACGGCTGGAATTAATAGGCGATATCATATCAAAT
>chr7D_336
TGCAGTCTCTGCTACCGCTGTTCCTGAGGCCGGCGGCGCGGTTCCTGGGGCCGTTCGTGGCGGGCCGGCCGGCGGAGGCG
GCGGCCACGGTGCTGCACCGCGCCGGCATGCTCCCGAGGAACCGGGCGCTGCGGCGGCTCGTCAGGGACGACCTGCTCGA
CGCCGGCGGCCACGACTGCATCGCGCGTCTCGTCGTCAGCGTGGTGAGCTGCCTCTGCTAGATCGCCGACCCGGCGGTGC
TCCGCTCTCCACCCCCGGTTCGTAGATTATCAGTAATAACTTTTCCTGTTGTTAAAAACAAAATTGGGCAGAACCTCCCC
CGTAAACATGAAGAAGAAAAAAAATCCACATCTCGGACTTAAATTATTTCAAAATTTAATTCAAAAGATTGGGCAGAACC
TCCCCAGTAATTTGACGCCACACAATTCACATATACACATTTCAACACACAATATTTAAATTTGCCAATGGCATGAGACA
TAAATATTGAAGTTCACATCCAAGTATATATATGACTTGCAACCTATCCAGGTTCACATATATGAGTCCAAGTCCGACCA
TACATCATATGAGCAACACAAAAGTGACTCTCATCATATCCAGGCAACAGGTTCACATACATAGTCTAAGTCCATACATG
CATGCCACGAGTAGCACAAAAGTGACTTTAGAATCACGTACATGAGTGCAAGTCCACGCAACGTAACATGAGCAGCACCA
AGAACATGTGTTATCCGTATTTCCAATTCCAGCGTTAGAATATTTTGGCGTTTGGGAACTTGGAGTTCTCCAGCTGCACA
GAACAACGGGCGGGACTAAAAATGACATGGCCACGTGAGAGACTACAACCAAATATAGGCATTGCAAATAGCAATAAGAA
TAAAATCATATAAGTAATTAACTTTGAAGAATAAATAGAATAATAAGAGGTCTAGTGTTAGGAATTAAGAAGCAACCGAT
GCAACGAACAGGGGATGATTAATAATGGGATCTGTTAAATCACCGTTATGATTTGATTCTGGACAATGCATCGGTTAGTG
AGCGCACACAAAATGAATCTAGCCATGCATCACATTCAAAACCTTGCTATGTTATACCGTCGTATAAACAGTAAGCCGTG
ACGATGACAAATGACAAGGACATGCATCTTATTTTCCAAAACAAGGACATATATCTTCAATATTGAATTATTGATACTTT
CCTATGTTATACCGTAGTACAAGGAGATTAAAAGATGCACATATTATGGATGGGGTATCCCCTGGCCGGAGTCTCCAACC
ATGCCGGTGGCCGAGCCCCCAGCCACTGCCGCGCCCGAGCCCGCTGCAGCCGAGCCACCGCCACCTGCAGAAGTTGTGCC
ATCACCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTCCACCATCACTATCGGTCACCAACGC
TGGATCCACAGCCGCGCCTTGGCCGTCTTCCGCGGCCGTCTCCATCCACTGCACCGCCTCCATCCATATCCCTAAGCCGC
CGCCGCCGCTAGGGCTGGGGAGAAAGGGGATGAGAAGAGAGCGTCGGGTCGGGACTCGGTAGAGAAGAGAGGCCTTTGTT
TTTCTTTTTTCTCAAGTTTAATTGTTTATTATGAACACGGGCAATTTCGTCCAACTGCAAAGAACTGACATTGGTTAATG
CAGATTTTAACGGTGTCTCCTAACAGAACTGGCGGAAGTGTTGGGGAGAATTATTTTTTTATTTTTTTGCAGTGTTAAAT
AGGGAACAAACATTCAAAACAGTGTTATATAAGGAGTTTTCTCGTCAAAATAAGGCCACCCACCACGCAATCAATAGTCT
CAATTGAACGAGAGCGCTTCCCCCTAGGGAGCTTAGTGATATAGTAGGAGACTAGTACAAAACACGCTGCACGCAAACAC
ACGCCGTACTTTGCTTGTTGGGGGTAACAATCAGTCTGACCAAGCCGAGCAAGCGTACCGCTAATCTAAGGCCTTCTTTG
GATTGGAGGATTTTCACAGGTTTTTCATGGGATACCAATCCTCAGGATTGTTTCCTATGGAACACATTTGGATCAAAGGA
TTGGGCCATTAAAATTCCTCAGGATTGGGTCTCCAAGGTGCTGATTCCAAAGGAATTTACACATGAGGTCCGACCTCTGG
AAAAAATCCATAAGATTGGCTATGTCATGGCAATCAAATCCTTCATTTTTTTCTATTCCTTTATTTTGCAAATCCTGTGA
TCCAAAGAAGCCCTGAGAGTGTCCCCTCTTTGCTCACCTCATCTCTCTTGATAGCTTTGTTTTGATGATGCCAACAGGTG
AACACGTACGCACGTAACCATCGTACCATCAAAAAGGCACTGCTGAGTGACACGCGGACCAGAAGCTGCAGAGTCGGCGC
CCGGCCGCGATCGCGTCCATGCTCCCTCTCAGGCGCGTGCGCTTGCTTGCACACCTGCCCATCGATCACACGTCCCAAAG
AGGCTCCTGGCTCCCTCTCAAGCGCACCTCCAACACTGCCTGACATTGCCATTGCCATTGCCGATTGCTACTGCCAGTTG
ACAACGGGATCCCATACCTCATGCACGCACGCACGCATGTTAGAATAGTAATCCAAAATATATTTGTGTGATAGAATTCG
CCAGCACGTG---TGCTAGTAGTATTTCGTGTCCTATCAGAGTCCTGCACGAACTA-------TGCATGCCTGCAACGTA
CTAGT---------------------------------------------------------------------------
-------------AGTAGTTGTGTACGAGTCAGCTTAGGTTTGCCTAGCAATCAAGGTCGGCGGGTGATTAGATTTAGGA
A-------GTACTAGTGTCCGAGTCTAGTACGAGTCCATATCAGCGGCAGTCAAGTCTAGCCGGATCGTGTGTATATATA
TGTGTGCACGAGGCTGCGTGAGTTCTGTACTTTTGTATCACGGCGAGAAAAGAAGAAAAGAAATAAAGAGAAAATAAAGG
CACGACAAGGGCCCTTGGCTATTTGCCATTGCCGGTTGCCACCGCCAGTCGACACCGGCGGCTTTCAATCACGGCGAGCA
GTCCAGCCGGCCAGTCGTCGCGCCTCCTGATCACAGTTCAATGGTACGTGTCAGG-------------------------
-------CTTGTGGCCTG----TTAGACGCATGCGTGCTAAATTGCTAGTAATTCAGTGGCATAAAATTCTTGGCATGTG
TGTTGGACTCACGCCGTGTGCGCTGCAATTAATGCAGTCTCTGCTACCGCTGTTCCTGAGGCCGGCGGCGCGGTTCCTGG
GGCCGTTCCTGGCGGGCCGGCCGGCGGAGGCGGCGGCCACGCTGCTGCACCGCGCCGGCGTGCTCCCGAGGGACAGGGCT
CTGGAGCGGCTCGTCAGGGACGACGACGGCGGCGCCGAGGACTGCATCGCGCGTCTCGTCATCAGCGTGGTGAGCTGCCT
CTGCTAGATGGCCA---------GTTGATACACTGTGGTTTGGGGATTGAAGTTCTCCACTACTACT-------------
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--------------ACAGGTTTAG------CATGAAGCAAGCTTCTTGCAGATTAATGCAACTTCATTCATTGGTTAACA
GTGACCAACGACTTTTTTTTTACC---TGTTCGATAATTTGAAGAGCAGCGCATCCCGT---------------------
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--------------------------------------------------------------------CTGAACTAGAGA
CTGAGGCAACTTGTACAAATAGCAAACGCGTAAAATTATTCATGGCCCTTCGTTTCCAACTCAGCACTCCAAAATATATT
GTCATGATCCATAATTTATAGAGAAAACAAGTAACCA---------------ATAAAAGCTCATATTTCCAAATTAAGAG
AGATAAGACAGAAGGCTAGTTAGAAAACAGACACATATTCCGCAAAAAATAAAATAAAAAAATAAAACAGGTACATGTGC
TGATACCACTTCAAGGATCCACCCATTAGCAGCAAGTTACAGCAACAATAACTAATTAAAGCCAGTAACCATATGGCAGT
GAAAATGAATGTCTCAGCGTTATG-AATCACTAAACAAATTGTGCCGGGCTCTCCTTGAGCCTTCTGTCTACAACCAAAT
TGTATTATTTTACAGATACGGCTGGAATTAATAGGCGATATCTTATCAAAT
>chr7A_345
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---------------------------------------------------------ATATATATGTGTGATAGAATTAT
AGTTAGCACGTAATGCTAGTAGTATTTCGTGTCCTATCAGAGTCCTGCACGAACTATGCATGCTGCATGCATGCAACGTA
CTAG----------------------------------------------------------------------------
------------------TTGTGTACGAGTCAGCTTAGGTTTGCCTAGCAATCAAGGTCGGCGGCTGATTAGA-TTAGGA
AGTAGTACGTACTAGTGTCCGAGTCTAGTACGAGTCCACAGCAGGATCGGTCTAGTCTACCCGGATCGTGTATATATAT-
---GTGCACGAGGCTGCGTGAGTTCTGTACTTTTGTATCACGGTGAGAACAGCAGAAAAGAAATAAAGAGAAAATAAGGA
CACGACAAGGGCCCTTGGCTATTGGCCATTGCCGGTTGCCACTGCCAGTTGACACCGGCGGCCTTCAATCACGGCGAGCA
GCCCAGCCGGCCAGTCGTCGCGCCTCCTGATCATAGCTCAATGGTACGTGTCAGGTTCGTACTTCGTACCCGCGCCCTAA
TCTTCTGCTTGTACCCTTTCTTTTCGACGCACGCGTGCTAAATTGCTAGTAATTCAGTGGCTTGAAATTCTTGGCATG--
CGTTGGACTCACTTCGTGTGCATGCGCTGCAATGCAGTCTCTGCTACCGCTGTTCCTGAGGCCGGCGGCGCGGTTCCTGG
GGCCGTTCCTGGCGGGCCGGCCGGCGGAGGCGGCGGCCACGCTGCTGCACCGCGCCGGCGTGCTCCCGATGAACAGGGCT
CTGGAGCGGCTCGTCAGG---GACGACGGCGGCGCCGAGGACTGCATCGCGCGTCTCGTCGTCAGCGTGCTCAGCTGCCT
CCGCTAGGGAACCGGTTTAGCATGTTGATACACTGTGGTTTGGGGATTGATGTTCTCCACTACTACTACAGGTTTAGCAT
GAAGGACTGAAGCTAGCGAGGGAAACAGGATGCCATAATGTGATAGTAAGATCGGACAATATCACGGTGGTGGAGGCACT
CAAATTCAATGGTGGCTACTCCATGGTGGCAGCACCGTTATTTGATGAATGTCGTAGTTTTCTCGAAGACTTTAGGAGGT
TTACTATCGAGCATTGTATTAGAGAGTTAAATAGCGTAGCTCATGAGCTAGCAAGATGGGGTAGTGCTATTAATCCATCT
CGCTGGATTGACGCCCCGCCTGATTTCATTGTAAATCTTTTGGCAGACGATGTTTCTATTCTTTGATTAATAAAGTAAAC
TTTCCTGTAAAAAAACAGGTTTAG------CATGAAGCAAGTTTCTTGCAGATTTAATGCAAC---TTCATTGGTTAACA
GTGACTGACGCCTTTTTTTGACATATATGTTTGATAATTTCAAGAGCAGTG-----------------------------
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----------------------------------------------CCTTCATTTCTAACTCAGCACTCCAATATATATT
CTCATGATCCATAATTTATAGAGAAAACAAGTAACCAGAAAGGAAAAAATAAATAAAAGCTCATTTTTCCAAATTAAGAG
AGATAAGACAGAAGGCTAGTTAGAA----------------------------------------AACAGGCACATGTGC
TGATACCATTTCAAGGATCCACCGATTAGCAGCAAGTTACAACAACAATAACTAATTAAAGCCAGTAACCATATGGCAGT
GAAAATGAATGTGTCGGCGTTATAAAATCACTAACTGAATTGTGCCGGGCTCTCCTTGAGCCTTCTGTCTAAAACCAAAT
TGTATTATTTTACAGACACGGCTGGAATTAATAGGCGATGTCTCATCAAAT
>SNPs
SSSSSSS--S--SS-S-S-SSS---SSSSSS--S-SSSSSSSSS--S-S--S-SS---S--S---S-SSSS-SS--S-SS
-SS--SS-S-S-SSSS--SS-SSSSSSSSSSSSSSS-SSSS-SSS-S---SSS--SSS-SSSSSSS-S-SSSSSS-S-S-
-SSSSSS-SSSSSSSSSSSSS-S-SSSSSSS-SSSSS-SSSSSSSS--S-S-SS-SSS-SS-SS-SSSSS-S-SSSS-SS
-SSS-S-S---SSSSSSSS-SSSS-SSS-SSSSSSSSS-SSSSS---SS-SSSSS-S-SSSSS-SSS-SS-SS-S-S-SS
SSSSSSSSSSS----S--SS------------------------------------------------------------
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-----------------------------------------------------------------S----------S---
-----------------------------------------------------S-----------------------S--
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-------------S----------------------------S--------S---------------
----------------------------------------------------------------------------S---
-S-------------------------------S------------------S--------------S--S---------
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-------------------------------------------------------S---------------S------S-
------S-S-------------S---------S-----------------------------------------------
----------------------------------------------------------------------------S---
-------------S---------------------------S-------------------------------------S
--------------S-----------------------------------------------------------------
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------------------------SSSSSS------SS------------------------------S-----------
-----------------S----SSSS-SSS-SSS-SS--SSSSSS-S-S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------
---------------S-----------S------------S---------------------------------------
-----S-------------------------------------------S----------------------------S-
--------------S---------------S-----S-SS----------------------------------------
--------------------------S-----------------------------------------------------
-------S-----------------------------------------------------------S------------
------------------------------------------S--------
>forward_167
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-------------------------------------------------------------------GCAGTGCCCACAA
CATGTTT-------------------------------------------------------------------------
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>reverse_4476
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---------------------------------------------------------------------------GTCAA
ACCCGGTCAACATGC-----------------------------------------------------------------
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