Multiple sequence alignment - TraesCS7B01G328200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G328200 chr7B 100.000 2893 0 0 1 2893 582740072 582737180 0.000000e+00 5343.0
1 TraesCS7B01G328200 chr7B 92.625 339 18 3 964 1295 582709671 582709333 5.610000e-132 481.0
2 TraesCS7B01G328200 chr7B 83.721 301 34 7 1398 1698 582709149 582708864 1.320000e-68 270.0
3 TraesCS7B01G328200 chr7B 100.000 35 0 0 878 912 582709740 582709706 6.690000e-07 65.8
4 TraesCS7B01G328200 chr7A 90.534 1236 66 25 847 2052 621084268 621083054 0.000000e+00 1587.0
5 TraesCS7B01G328200 chr7A 92.299 844 44 11 1 829 732937598 732936761 0.000000e+00 1179.0
6 TraesCS7B01G328200 chr7A 92.124 419 31 2 2473 2890 621083058 621082641 8.930000e-165 590.0
7 TraesCS7B01G328200 chr7A 96.564 291 9 1 2052 2341 120943738 120944028 5.610000e-132 481.0
8 TraesCS7B01G328200 chr7A 91.139 316 21 1 964 1272 621046553 621046238 3.450000e-114 422.0
9 TraesCS7B01G328200 chr7A 99.286 140 1 0 2342 2481 4946380 4946519 1.330000e-63 254.0
10 TraesCS7B01G328200 chr7A 91.111 90 4 4 878 964 621046611 621046523 5.060000e-23 119.0
11 TraesCS7B01G328200 chr7D 90.493 1115 68 12 964 2052 539853033 539851931 0.000000e+00 1437.0
12 TraesCS7B01G328200 chr7D 91.080 426 33 3 2473 2893 539851935 539851510 3.230000e-159 571.0
13 TraesCS7B01G328200 chr7D 92.625 339 18 3 964 1295 539825903 539825565 5.610000e-132 481.0
14 TraesCS7B01G328200 chr7D 83.007 306 37 9 1398 1703 539825381 539825091 2.210000e-66 263.0
15 TraesCS7B01G328200 chr7D 79.675 123 10 5 857 964 539853125 539853003 1.110000e-09 75.0
16 TraesCS7B01G328200 chr7D 100.000 35 0 0 878 912 539825973 539825939 6.690000e-07 65.8
17 TraesCS7B01G328200 chr5A 96.172 836 27 4 1 832 692064553 692065387 0.000000e+00 1362.0
18 TraesCS7B01G328200 chr5A 82.399 642 89 18 44 673 618266184 618266813 3.280000e-149 538.0
19 TraesCS7B01G328200 chr5A 99.286 140 1 0 2342 2481 614343471 614343332 1.330000e-63 254.0
20 TraesCS7B01G328200 chr3B 95.409 806 35 2 10 813 810263745 810264550 0.000000e+00 1282.0
21 TraesCS7B01G328200 chr3B 96.564 291 9 1 2052 2341 92161042 92160752 5.610000e-132 481.0
22 TraesCS7B01G328200 chr1D 93.914 838 39 8 1 829 483522816 483523650 0.000000e+00 1254.0
23 TraesCS7B01G328200 chrUn 93.519 756 36 9 83 829 26725957 26725206 0.000000e+00 1112.0
24 TraesCS7B01G328200 chrUn 96.564 291 9 1 2052 2341 40103971 40103681 5.610000e-132 481.0
25 TraesCS7B01G328200 chrUn 96.564 291 9 1 2052 2341 381190106 381190396 5.610000e-132 481.0
26 TraesCS7B01G328200 chr4B 90.800 837 54 12 10 829 18703369 18704199 0.000000e+00 1098.0
27 TraesCS7B01G328200 chr6A 89.431 738 49 19 83 799 603195413 603196142 0.000000e+00 904.0
28 TraesCS7B01G328200 chr4A 96.564 291 9 1 2052 2341 435555517 435555807 5.610000e-132 481.0
29 TraesCS7B01G328200 chr2A 96.564 291 9 1 2052 2341 618272418 618272128 5.610000e-132 481.0
30 TraesCS7B01G328200 chr2A 96.564 291 9 1 2052 2341 755495464 755495754 5.610000e-132 481.0
31 TraesCS7B01G328200 chr1B 96.564 291 9 1 2052 2341 583518650 583518940 5.610000e-132 481.0
32 TraesCS7B01G328200 chr1B 96.564 291 9 1 2052 2341 683716019 683716309 5.610000e-132 481.0
33 TraesCS7B01G328200 chr1A 80.871 643 94 24 44 672 535576308 535575681 2.020000e-131 479.0
34 TraesCS7B01G328200 chr6D 99.286 140 1 0 2342 2481 102370766 102370627 1.330000e-63 254.0
35 TraesCS7B01G328200 chr6B 99.286 140 1 0 2342 2481 388243115 388242976 1.330000e-63 254.0
36 TraesCS7B01G328200 chr6B 98.571 140 2 0 2342 2481 388184290 388184151 6.190000e-62 248.0
37 TraesCS7B01G328200 chr6B 98.571 140 2 0 2342 2481 388301516 388301377 6.190000e-62 248.0
38 TraesCS7B01G328200 chr2D 99.286 140 1 0 2342 2481 189858234 189858095 1.330000e-63 254.0
39 TraesCS7B01G328200 chr2D 99.286 140 1 0 2342 2481 200910821 200910960 1.330000e-63 254.0
40 TraesCS7B01G328200 chr5B 99.281 139 1 0 2342 2480 455583961 455583823 4.790000e-63 252.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G328200 chr7B 582737180 582740072 2892 True 5343.000000 5343 100.000000 1 2893 1 chr7B.!!$R1 2892
1 TraesCS7B01G328200 chr7B 582708864 582709740 876 True 272.266667 481 92.115333 878 1698 3 chr7B.!!$R2 820
2 TraesCS7B01G328200 chr7A 732936761 732937598 837 True 1179.000000 1179 92.299000 1 829 1 chr7A.!!$R1 828
3 TraesCS7B01G328200 chr7A 621082641 621084268 1627 True 1088.500000 1587 91.329000 847 2890 2 chr7A.!!$R3 2043
4 TraesCS7B01G328200 chr7D 539851510 539853125 1615 True 694.333333 1437 87.082667 857 2893 3 chr7D.!!$R2 2036
5 TraesCS7B01G328200 chr7D 539825091 539825973 882 True 269.933333 481 91.877333 878 1703 3 chr7D.!!$R1 825
6 TraesCS7B01G328200 chr5A 692064553 692065387 834 False 1362.000000 1362 96.172000 1 832 1 chr5A.!!$F2 831
7 TraesCS7B01G328200 chr5A 618266184 618266813 629 False 538.000000 538 82.399000 44 673 1 chr5A.!!$F1 629
8 TraesCS7B01G328200 chr3B 810263745 810264550 805 False 1282.000000 1282 95.409000 10 813 1 chr3B.!!$F1 803
9 TraesCS7B01G328200 chr1D 483522816 483523650 834 False 1254.000000 1254 93.914000 1 829 1 chr1D.!!$F1 828
10 TraesCS7B01G328200 chrUn 26725206 26725957 751 True 1112.000000 1112 93.519000 83 829 1 chrUn.!!$R1 746
11 TraesCS7B01G328200 chr4B 18703369 18704199 830 False 1098.000000 1098 90.800000 10 829 1 chr4B.!!$F1 819
12 TraesCS7B01G328200 chr6A 603195413 603196142 729 False 904.000000 904 89.431000 83 799 1 chr6A.!!$F1 716
13 TraesCS7B01G328200 chr1A 535575681 535576308 627 True 479.000000 479 80.871000 44 672 1 chr1A.!!$R1 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
965 1031 0.179121 CAGCACGTACGCCTTGGATA 60.179 55.0 16.72 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2153 2340 0.039326 AGCTGTCCGTAGTACACCCT 59.961 55.0 0.38 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.472695 AATGCTTCAACGAGGCACTA 57.527 45.000 2.67 0.00 46.65 2.74
155 158 4.338118 AGAAAAAGCTTCAACGGTTGATGA 59.662 37.500 29.91 15.44 39.84 2.92
193 196 5.010922 AGGACATTGTGCAATAGAAAAAGCA 59.989 36.000 11.08 0.00 34.10 3.91
832 877 0.811616 GCGCACATCAGTCCCCTTAG 60.812 60.000 0.30 0.00 0.00 2.18
833 878 0.811616 CGCACATCAGTCCCCTTAGC 60.812 60.000 0.00 0.00 0.00 3.09
834 879 0.253044 GCACATCAGTCCCCTTAGCA 59.747 55.000 0.00 0.00 0.00 3.49
835 880 1.340017 GCACATCAGTCCCCTTAGCAA 60.340 52.381 0.00 0.00 0.00 3.91
836 881 2.879756 GCACATCAGTCCCCTTAGCAAA 60.880 50.000 0.00 0.00 0.00 3.68
837 882 3.420893 CACATCAGTCCCCTTAGCAAAA 58.579 45.455 0.00 0.00 0.00 2.44
838 883 3.441572 CACATCAGTCCCCTTAGCAAAAG 59.558 47.826 0.00 0.00 0.00 2.27
839 884 2.879103 TCAGTCCCCTTAGCAAAAGG 57.121 50.000 10.21 10.21 37.17 3.11
874 925 4.022155 GGAGATAGAAACAGACCCGGATAC 60.022 50.000 0.73 0.00 0.00 2.24
913 964 2.564553 AATCGGAGACAGAGTGGCGC 62.565 60.000 0.00 0.00 42.51 6.53
956 1022 1.074319 ATAACGGTGCAGCACGTACG 61.074 55.000 19.42 18.53 43.31 3.67
960 1026 3.041940 GTGCAGCACGTACGCCTT 61.042 61.111 16.72 0.00 0.00 4.35
961 1027 3.041351 TGCAGCACGTACGCCTTG 61.041 61.111 16.72 11.82 0.00 3.61
962 1028 3.788766 GCAGCACGTACGCCTTGG 61.789 66.667 16.72 2.59 0.00 3.61
963 1029 2.048597 CAGCACGTACGCCTTGGA 60.049 61.111 16.72 0.00 0.00 3.53
964 1030 1.447838 CAGCACGTACGCCTTGGAT 60.448 57.895 16.72 0.00 0.00 3.41
965 1031 0.179121 CAGCACGTACGCCTTGGATA 60.179 55.000 16.72 0.00 0.00 2.59
966 1032 0.750850 AGCACGTACGCCTTGGATAT 59.249 50.000 16.72 0.00 0.00 1.63
967 1033 1.958579 AGCACGTACGCCTTGGATATA 59.041 47.619 16.72 0.00 0.00 0.86
968 1034 2.561419 AGCACGTACGCCTTGGATATAT 59.439 45.455 16.72 0.00 0.00 0.86
969 1035 3.760151 AGCACGTACGCCTTGGATATATA 59.240 43.478 16.72 0.00 0.00 0.86
970 1036 4.219070 AGCACGTACGCCTTGGATATATAA 59.781 41.667 16.72 0.00 0.00 0.98
971 1037 4.325472 GCACGTACGCCTTGGATATATAAC 59.675 45.833 16.72 0.00 0.00 1.89
972 1038 4.556135 CACGTACGCCTTGGATATATAACG 59.444 45.833 16.72 0.00 0.00 3.18
973 1039 4.100529 CGTACGCCTTGGATATATAACGG 58.899 47.826 0.52 0.00 0.00 4.44
974 1040 4.379813 CGTACGCCTTGGATATATAACGGT 60.380 45.833 0.52 0.00 0.00 4.83
975 1041 3.921677 ACGCCTTGGATATATAACGGTG 58.078 45.455 0.00 3.63 0.00 4.94
976 1042 2.671396 CGCCTTGGATATATAACGGTGC 59.329 50.000 0.00 0.00 0.00 5.01
977 1043 2.671396 GCCTTGGATATATAACGGTGCG 59.329 50.000 0.00 0.00 0.00 5.34
978 1044 3.259064 CCTTGGATATATAACGGTGCGG 58.741 50.000 0.00 0.00 0.00 5.69
979 1045 2.373540 TGGATATATAACGGTGCGGC 57.626 50.000 0.00 0.00 0.00 6.53
980 1046 1.619332 TGGATATATAACGGTGCGGCA 59.381 47.619 0.00 0.00 0.00 5.69
981 1047 1.997606 GGATATATAACGGTGCGGCAC 59.002 52.381 24.43 24.43 0.00 5.01
1076 1153 2.256764 CCCGATCCGATCAGCGAG 59.743 66.667 9.07 0.00 44.57 5.03
1355 1495 0.731514 GAACATCCGCGTCGAGTTCA 60.732 55.000 19.27 0.00 38.66 3.18
1356 1496 0.108804 AACATCCGCGTCGAGTTCAT 60.109 50.000 4.92 0.00 0.00 2.57
1441 1605 1.557443 CGTTCCCTCACAAGCACGAC 61.557 60.000 0.00 0.00 0.00 4.34
1488 1652 0.898320 TCGAAGAAGGAGCTTGAGGG 59.102 55.000 0.00 0.00 0.00 4.30
1519 1684 0.763223 ACCTGTGGGACGACTCCTTT 60.763 55.000 0.00 0.00 36.68 3.11
1523 1688 0.680061 GTGGGACGACTCCTTTGTCT 59.320 55.000 0.00 0.00 38.57 3.41
1544 1709 4.913126 GGTGTGAGATCACCGTCC 57.087 61.111 10.34 6.81 46.38 4.79
1784 1965 7.919621 ACTATATAGTTCAGGTGCGTTAGTTTC 59.080 37.037 9.71 0.00 31.13 2.78
1809 1990 4.357018 TGTCGCTGAGAGTGTTATGTAG 57.643 45.455 0.00 0.00 0.00 2.74
1811 1992 4.939439 TGTCGCTGAGAGTGTTATGTAGTA 59.061 41.667 0.00 0.00 0.00 1.82
1812 1993 5.589050 TGTCGCTGAGAGTGTTATGTAGTAT 59.411 40.000 0.00 0.00 0.00 2.12
1988 2175 5.692613 AAATCACAATGGGCAAACAATTG 57.307 34.783 3.24 3.24 39.65 2.32
2044 2231 5.041287 CGCTGAAAATCGTACTATCCTTCA 58.959 41.667 0.00 0.00 0.00 3.02
2063 2250 8.893219 TCCTTCATAGTACATGATCAAATGTC 57.107 34.615 5.23 0.00 41.09 3.06
2064 2251 8.708378 TCCTTCATAGTACATGATCAAATGTCT 58.292 33.333 5.23 6.10 41.09 3.41
2065 2252 9.987272 CCTTCATAGTACATGATCAAATGTCTA 57.013 33.333 5.23 7.75 41.09 2.59
2067 2254 9.463443 TTCATAGTACATGATCAAATGTCTACG 57.537 33.333 5.23 1.94 41.09 3.51
2068 2255 8.082242 TCATAGTACATGATCAAATGTCTACGG 58.918 37.037 5.23 4.98 41.09 4.02
2069 2256 5.601662 AGTACATGATCAAATGTCTACGGG 58.398 41.667 5.23 0.00 41.09 5.28
2070 2257 4.487714 ACATGATCAAATGTCTACGGGT 57.512 40.909 0.00 0.00 35.92 5.28
2071 2258 4.191544 ACATGATCAAATGTCTACGGGTG 58.808 43.478 0.00 0.00 35.92 4.61
2072 2259 3.973206 TGATCAAATGTCTACGGGTGT 57.027 42.857 0.00 0.00 0.00 4.16
2073 2260 3.857052 TGATCAAATGTCTACGGGTGTC 58.143 45.455 0.00 0.00 0.00 3.67
2074 2261 3.259625 TGATCAAATGTCTACGGGTGTCA 59.740 43.478 0.00 0.00 0.00 3.58
2075 2262 3.973206 TCAAATGTCTACGGGTGTCAT 57.027 42.857 0.00 0.00 0.00 3.06
2076 2263 4.280436 TCAAATGTCTACGGGTGTCATT 57.720 40.909 0.00 0.00 0.00 2.57
2077 2264 5.408880 TCAAATGTCTACGGGTGTCATTA 57.591 39.130 0.00 0.00 0.00 1.90
2078 2265 5.795972 TCAAATGTCTACGGGTGTCATTAA 58.204 37.500 0.00 0.00 0.00 1.40
2079 2266 6.411376 TCAAATGTCTACGGGTGTCATTAAT 58.589 36.000 0.00 0.00 0.00 1.40
2080 2267 7.557724 TCAAATGTCTACGGGTGTCATTAATA 58.442 34.615 0.00 0.00 0.00 0.98
2081 2268 8.208224 TCAAATGTCTACGGGTGTCATTAATAT 58.792 33.333 0.00 0.00 0.00 1.28
2082 2269 8.495949 CAAATGTCTACGGGTGTCATTAATATC 58.504 37.037 0.00 0.00 0.00 1.63
2083 2270 6.718522 TGTCTACGGGTGTCATTAATATCA 57.281 37.500 0.00 0.00 0.00 2.15
2084 2271 7.297936 TGTCTACGGGTGTCATTAATATCAT 57.702 36.000 0.00 0.00 0.00 2.45
2085 2272 8.411991 TGTCTACGGGTGTCATTAATATCATA 57.588 34.615 0.00 0.00 0.00 2.15
2086 2273 8.520351 TGTCTACGGGTGTCATTAATATCATAG 58.480 37.037 0.00 0.00 0.00 2.23
2087 2274 7.974501 GTCTACGGGTGTCATTAATATCATAGG 59.025 40.741 0.00 0.00 0.00 2.57
2088 2275 6.049955 ACGGGTGTCATTAATATCATAGGG 57.950 41.667 0.00 0.00 0.00 3.53
2089 2276 5.546499 ACGGGTGTCATTAATATCATAGGGT 59.454 40.000 0.00 0.00 0.00 4.34
2090 2277 6.727231 ACGGGTGTCATTAATATCATAGGGTA 59.273 38.462 0.00 0.00 0.00 3.69
2091 2278 7.039882 CGGGTGTCATTAATATCATAGGGTAC 58.960 42.308 0.00 0.00 0.00 3.34
2092 2279 7.039882 GGGTGTCATTAATATCATAGGGTACG 58.960 42.308 0.00 0.00 0.00 3.67
2093 2280 7.093640 GGGTGTCATTAATATCATAGGGTACGA 60.094 40.741 0.00 0.00 0.00 3.43
2094 2281 8.308931 GGTGTCATTAATATCATAGGGTACGAA 58.691 37.037 0.00 0.00 0.00 3.85
2095 2282 9.136952 GTGTCATTAATATCATAGGGTACGAAC 57.863 37.037 0.00 0.00 0.00 3.95
2096 2283 9.085645 TGTCATTAATATCATAGGGTACGAACT 57.914 33.333 0.00 0.00 0.00 3.01
2097 2284 9.924650 GTCATTAATATCATAGGGTACGAACTT 57.075 33.333 0.00 0.00 0.00 2.66
2103 2290 6.651975 ATCATAGGGTACGAACTTCTAAGG 57.348 41.667 0.00 0.00 0.00 2.69
2104 2291 5.513233 TCATAGGGTACGAACTTCTAAGGT 58.487 41.667 0.00 0.00 0.00 3.50
2105 2292 5.591877 TCATAGGGTACGAACTTCTAAGGTC 59.408 44.000 0.00 0.00 39.38 3.85
2106 2293 3.771216 AGGGTACGAACTTCTAAGGTCA 58.229 45.455 8.41 0.00 42.95 4.02
2107 2294 4.351127 AGGGTACGAACTTCTAAGGTCAT 58.649 43.478 8.41 0.00 42.95 3.06
2108 2295 4.159879 AGGGTACGAACTTCTAAGGTCATG 59.840 45.833 8.41 0.00 42.95 3.07
2109 2296 4.430908 GGTACGAACTTCTAAGGTCATGG 58.569 47.826 8.41 0.00 42.95 3.66
2110 2297 2.973945 ACGAACTTCTAAGGTCATGGC 58.026 47.619 8.41 0.00 42.95 4.40
2111 2298 1.927174 CGAACTTCTAAGGTCATGGCG 59.073 52.381 8.41 0.00 42.95 5.69
2112 2299 2.674177 CGAACTTCTAAGGTCATGGCGT 60.674 50.000 8.41 0.00 42.95 5.68
2113 2300 3.428452 CGAACTTCTAAGGTCATGGCGTA 60.428 47.826 8.41 0.00 42.95 4.42
2114 2301 3.802948 ACTTCTAAGGTCATGGCGTAG 57.197 47.619 0.00 0.00 0.00 3.51
2115 2302 2.431057 ACTTCTAAGGTCATGGCGTAGG 59.569 50.000 6.77 0.00 0.00 3.18
2116 2303 1.410004 TCTAAGGTCATGGCGTAGGG 58.590 55.000 6.77 0.00 0.00 3.53
2117 2304 1.120530 CTAAGGTCATGGCGTAGGGT 58.879 55.000 0.00 0.00 0.00 4.34
2118 2305 2.091720 TCTAAGGTCATGGCGTAGGGTA 60.092 50.000 6.77 0.00 0.00 3.69
2119 2306 1.802553 AAGGTCATGGCGTAGGGTAT 58.197 50.000 0.00 0.00 0.00 2.73
2120 2307 1.802553 AGGTCATGGCGTAGGGTATT 58.197 50.000 0.00 0.00 0.00 1.89
2121 2308 1.416401 AGGTCATGGCGTAGGGTATTG 59.584 52.381 0.00 0.00 0.00 1.90
2122 2309 1.542547 GGTCATGGCGTAGGGTATTGG 60.543 57.143 0.00 0.00 0.00 3.16
2123 2310 1.414919 GTCATGGCGTAGGGTATTGGA 59.585 52.381 0.00 0.00 0.00 3.53
2124 2311 2.038557 GTCATGGCGTAGGGTATTGGAT 59.961 50.000 0.00 0.00 0.00 3.41
2125 2312 3.259876 GTCATGGCGTAGGGTATTGGATA 59.740 47.826 0.00 0.00 0.00 2.59
2126 2313 3.513912 TCATGGCGTAGGGTATTGGATAG 59.486 47.826 0.00 0.00 0.00 2.08
2127 2314 2.253610 TGGCGTAGGGTATTGGATAGG 58.746 52.381 0.00 0.00 0.00 2.57
2128 2315 1.066358 GGCGTAGGGTATTGGATAGGC 60.066 57.143 0.00 0.00 0.00 3.93
2129 2316 1.900486 GCGTAGGGTATTGGATAGGCT 59.100 52.381 0.00 0.00 0.00 4.58
2130 2317 2.353803 GCGTAGGGTATTGGATAGGCTG 60.354 54.545 0.00 0.00 0.00 4.85
2131 2318 2.233922 CGTAGGGTATTGGATAGGCTGG 59.766 54.545 0.00 0.00 0.00 4.85
2132 2319 2.514726 AGGGTATTGGATAGGCTGGT 57.485 50.000 0.00 0.00 0.00 4.00
2133 2320 2.339769 AGGGTATTGGATAGGCTGGTC 58.660 52.381 0.00 0.00 0.00 4.02
2134 2321 1.351350 GGGTATTGGATAGGCTGGTCC 59.649 57.143 12.36 12.36 35.02 4.46
2135 2322 1.002087 GGTATTGGATAGGCTGGTCCG 59.998 57.143 13.82 0.00 40.77 4.79
2136 2323 0.685097 TATTGGATAGGCTGGTCCGC 59.315 55.000 13.82 0.00 40.77 5.54
2137 2324 1.056700 ATTGGATAGGCTGGTCCGCT 61.057 55.000 13.82 3.64 40.77 5.52
2138 2325 1.971505 TTGGATAGGCTGGTCCGCTG 61.972 60.000 13.82 0.00 40.77 5.18
2139 2326 2.423446 GATAGGCTGGTCCGCTGG 59.577 66.667 0.00 0.00 40.77 4.85
2140 2327 2.365635 ATAGGCTGGTCCGCTGGT 60.366 61.111 0.00 0.00 40.77 4.00
2141 2328 2.370647 GATAGGCTGGTCCGCTGGTC 62.371 65.000 0.00 0.00 40.77 4.02
2144 2331 4.373116 GCTGGTCCGCTGGTCGAA 62.373 66.667 0.00 0.00 41.67 3.71
2145 2332 2.125912 CTGGTCCGCTGGTCGAAG 60.126 66.667 0.00 0.00 41.67 3.79
2146 2333 2.915659 TGGTCCGCTGGTCGAAGT 60.916 61.111 0.00 0.00 41.67 3.01
2147 2334 2.126031 GGTCCGCTGGTCGAAGTC 60.126 66.667 0.00 0.00 41.67 3.01
2148 2335 2.649034 GTCCGCTGGTCGAAGTCA 59.351 61.111 0.00 0.00 41.67 3.41
2149 2336 1.215647 GTCCGCTGGTCGAAGTCAT 59.784 57.895 0.00 0.00 41.67 3.06
2150 2337 0.389948 GTCCGCTGGTCGAAGTCATT 60.390 55.000 0.00 0.00 41.67 2.57
2151 2338 0.389817 TCCGCTGGTCGAAGTCATTG 60.390 55.000 0.00 0.00 41.67 2.82
2152 2339 1.421485 CGCTGGTCGAAGTCATTGC 59.579 57.895 0.00 0.00 41.67 3.56
2153 2340 1.291184 CGCTGGTCGAAGTCATTGCA 61.291 55.000 0.00 0.00 41.67 4.08
2154 2341 0.445436 GCTGGTCGAAGTCATTGCAG 59.555 55.000 0.00 0.00 0.00 4.41
2155 2342 1.081892 CTGGTCGAAGTCATTGCAGG 58.918 55.000 0.00 0.00 0.00 4.85
2156 2343 0.321564 TGGTCGAAGTCATTGCAGGG 60.322 55.000 0.00 0.00 0.00 4.45
2157 2344 0.321653 GGTCGAAGTCATTGCAGGGT 60.322 55.000 0.00 0.00 0.00 4.34
2158 2345 0.798776 GTCGAAGTCATTGCAGGGTG 59.201 55.000 0.00 0.00 0.00 4.61
2159 2346 0.396435 TCGAAGTCATTGCAGGGTGT 59.604 50.000 0.00 0.00 0.00 4.16
2160 2347 1.621317 TCGAAGTCATTGCAGGGTGTA 59.379 47.619 0.00 0.00 0.00 2.90
2161 2348 1.732259 CGAAGTCATTGCAGGGTGTAC 59.268 52.381 0.00 0.00 0.00 2.90
2162 2349 2.612972 CGAAGTCATTGCAGGGTGTACT 60.613 50.000 0.00 0.00 0.00 2.73
2163 2350 3.368013 CGAAGTCATTGCAGGGTGTACTA 60.368 47.826 0.00 0.00 0.00 1.82
2164 2351 3.611766 AGTCATTGCAGGGTGTACTAC 57.388 47.619 0.00 0.00 0.00 2.73
2165 2352 2.094182 AGTCATTGCAGGGTGTACTACG 60.094 50.000 0.00 0.00 0.00 3.51
2166 2353 1.206132 TCATTGCAGGGTGTACTACGG 59.794 52.381 0.00 0.00 0.00 4.02
2167 2354 1.206132 CATTGCAGGGTGTACTACGGA 59.794 52.381 0.00 0.00 0.00 4.69
2168 2355 0.604578 TTGCAGGGTGTACTACGGAC 59.395 55.000 0.00 0.00 0.00 4.79
2169 2356 0.540133 TGCAGGGTGTACTACGGACA 60.540 55.000 0.00 0.00 0.00 4.02
2170 2357 0.172803 GCAGGGTGTACTACGGACAG 59.827 60.000 0.00 0.00 0.00 3.51
2171 2358 0.172803 CAGGGTGTACTACGGACAGC 59.827 60.000 0.00 0.00 43.09 4.40
2172 2359 0.039326 AGGGTGTACTACGGACAGCT 59.961 55.000 8.16 0.00 43.30 4.24
2173 2360 1.283029 AGGGTGTACTACGGACAGCTA 59.717 52.381 8.16 0.00 43.30 3.32
2174 2361 2.091994 AGGGTGTACTACGGACAGCTAT 60.092 50.000 8.16 0.00 43.30 2.97
2175 2362 2.692041 GGGTGTACTACGGACAGCTATT 59.308 50.000 8.16 0.00 43.30 1.73
2176 2363 3.490419 GGGTGTACTACGGACAGCTATTG 60.490 52.174 8.16 0.00 43.30 1.90
2177 2364 3.129988 GGTGTACTACGGACAGCTATTGT 59.870 47.826 1.39 0.00 44.55 2.71
2178 2365 4.381292 GGTGTACTACGGACAGCTATTGTT 60.381 45.833 1.39 0.00 41.05 2.83
2179 2366 4.797349 GTGTACTACGGACAGCTATTGTTC 59.203 45.833 0.00 0.00 41.05 3.18
2180 2367 3.521947 ACTACGGACAGCTATTGTTCC 57.478 47.619 0.00 0.00 41.05 3.62
2181 2368 2.829720 ACTACGGACAGCTATTGTTCCA 59.170 45.455 0.00 0.00 41.05 3.53
2182 2369 2.386661 ACGGACAGCTATTGTTCCAG 57.613 50.000 0.00 0.00 41.05 3.86
2183 2370 1.066143 ACGGACAGCTATTGTTCCAGG 60.066 52.381 0.00 0.00 41.05 4.45
2184 2371 1.743772 CGGACAGCTATTGTTCCAGGG 60.744 57.143 0.00 0.00 41.05 4.45
2185 2372 1.383523 GACAGCTATTGTTCCAGGGC 58.616 55.000 0.00 0.00 41.05 5.19
2186 2373 0.995024 ACAGCTATTGTTCCAGGGCT 59.005 50.000 0.00 0.00 36.31 5.19
2187 2374 1.355720 ACAGCTATTGTTCCAGGGCTT 59.644 47.619 0.00 0.00 36.31 4.35
2188 2375 2.225117 ACAGCTATTGTTCCAGGGCTTT 60.225 45.455 0.00 0.00 36.31 3.51
2189 2376 2.827921 CAGCTATTGTTCCAGGGCTTTT 59.172 45.455 0.00 0.00 0.00 2.27
2190 2377 3.092301 AGCTATTGTTCCAGGGCTTTTC 58.908 45.455 0.00 0.00 0.00 2.29
2191 2378 2.166459 GCTATTGTTCCAGGGCTTTTCC 59.834 50.000 0.00 0.00 0.00 3.13
2192 2379 2.702270 ATTGTTCCAGGGCTTTTCCT 57.298 45.000 0.00 0.00 37.71 3.36
2193 2380 2.470057 TTGTTCCAGGGCTTTTCCTT 57.530 45.000 0.00 0.00 34.31 3.36
2194 2381 2.470057 TGTTCCAGGGCTTTTCCTTT 57.530 45.000 0.00 0.00 34.31 3.11
2195 2382 2.316108 TGTTCCAGGGCTTTTCCTTTC 58.684 47.619 0.00 0.00 34.31 2.62
2196 2383 2.091333 TGTTCCAGGGCTTTTCCTTTCT 60.091 45.455 0.00 0.00 34.31 2.52
2197 2384 2.558795 GTTCCAGGGCTTTTCCTTTCTC 59.441 50.000 0.00 0.00 34.31 2.87
2198 2385 2.065799 TCCAGGGCTTTTCCTTTCTCT 58.934 47.619 0.00 0.00 34.31 3.10
2199 2386 2.447047 TCCAGGGCTTTTCCTTTCTCTT 59.553 45.455 0.00 0.00 34.31 2.85
2200 2387 2.560105 CCAGGGCTTTTCCTTTCTCTTG 59.440 50.000 0.00 0.00 34.31 3.02
2201 2388 3.225940 CAGGGCTTTTCCTTTCTCTTGT 58.774 45.455 0.00 0.00 34.31 3.16
2202 2389 3.254411 CAGGGCTTTTCCTTTCTCTTGTC 59.746 47.826 0.00 0.00 34.31 3.18
2203 2390 3.117512 AGGGCTTTTCCTTTCTCTTGTCA 60.118 43.478 0.00 0.00 32.13 3.58
2204 2391 3.829026 GGGCTTTTCCTTTCTCTTGTCAT 59.171 43.478 0.00 0.00 34.39 3.06
2205 2392 4.082517 GGGCTTTTCCTTTCTCTTGTCATC 60.083 45.833 0.00 0.00 34.39 2.92
2206 2393 4.520492 GGCTTTTCCTTTCTCTTGTCATCA 59.480 41.667 0.00 0.00 0.00 3.07
2207 2394 5.456265 GCTTTTCCTTTCTCTTGTCATCAC 58.544 41.667 0.00 0.00 0.00 3.06
2208 2395 5.673337 TTTTCCTTTCTCTTGTCATCACG 57.327 39.130 0.00 0.00 0.00 4.35
2209 2396 2.688507 TCCTTTCTCTTGTCATCACGC 58.311 47.619 0.00 0.00 0.00 5.34
2210 2397 1.734465 CCTTTCTCTTGTCATCACGCC 59.266 52.381 0.00 0.00 0.00 5.68
2211 2398 2.416747 CTTTCTCTTGTCATCACGCCA 58.583 47.619 0.00 0.00 0.00 5.69
2212 2399 2.542020 TTCTCTTGTCATCACGCCAA 57.458 45.000 0.00 0.00 0.00 4.52
2213 2400 1.795768 TCTCTTGTCATCACGCCAAC 58.204 50.000 0.00 0.00 0.00 3.77
2214 2401 1.069978 TCTCTTGTCATCACGCCAACA 59.930 47.619 0.00 0.00 0.00 3.33
2215 2402 2.079158 CTCTTGTCATCACGCCAACAT 58.921 47.619 0.00 0.00 0.00 2.71
2216 2403 3.056179 TCTCTTGTCATCACGCCAACATA 60.056 43.478 0.00 0.00 0.00 2.29
2217 2404 3.000041 TCTTGTCATCACGCCAACATAC 59.000 45.455 0.00 0.00 0.00 2.39
2218 2405 2.464157 TGTCATCACGCCAACATACA 57.536 45.000 0.00 0.00 0.00 2.29
2219 2406 2.073056 TGTCATCACGCCAACATACAC 58.927 47.619 0.00 0.00 0.00 2.90
2220 2407 2.073056 GTCATCACGCCAACATACACA 58.927 47.619 0.00 0.00 0.00 3.72
2221 2408 2.482336 GTCATCACGCCAACATACACAA 59.518 45.455 0.00 0.00 0.00 3.33
2222 2409 2.741517 TCATCACGCCAACATACACAAG 59.258 45.455 0.00 0.00 0.00 3.16
2223 2410 1.518325 TCACGCCAACATACACAAGG 58.482 50.000 0.00 0.00 0.00 3.61
2224 2411 0.109781 CACGCCAACATACACAAGGC 60.110 55.000 0.00 0.00 41.86 4.35
2225 2412 0.250727 ACGCCAACATACACAAGGCT 60.251 50.000 0.00 0.00 43.07 4.58
2226 2413 0.881118 CGCCAACATACACAAGGCTT 59.119 50.000 0.00 0.00 43.07 4.35
2227 2414 1.401409 CGCCAACATACACAAGGCTTG 60.401 52.381 25.06 25.06 43.07 4.01
2228 2415 1.669795 GCCAACATACACAAGGCTTGC 60.670 52.381 26.45 5.14 42.01 4.01
2229 2416 1.067635 CCAACATACACAAGGCTTGCC 60.068 52.381 26.45 2.97 0.00 4.52
2230 2417 1.888512 CAACATACACAAGGCTTGCCT 59.111 47.619 26.45 14.06 0.00 4.75
2231 2418 2.292828 ACATACACAAGGCTTGCCTT 57.707 45.000 26.45 20.03 0.00 4.35
2232 2419 2.162681 ACATACACAAGGCTTGCCTTC 58.837 47.619 26.45 0.00 0.00 3.46
2233 2420 2.161855 CATACACAAGGCTTGCCTTCA 58.838 47.619 26.45 8.43 0.00 3.02
2234 2421 1.604604 TACACAAGGCTTGCCTTCAC 58.395 50.000 26.45 0.00 0.00 3.18
2235 2422 0.395586 ACACAAGGCTTGCCTTCACA 60.396 50.000 26.45 0.00 0.00 3.58
2236 2423 0.313043 CACAAGGCTTGCCTTCACAG 59.687 55.000 26.45 14.35 0.00 3.66
2237 2424 0.825010 ACAAGGCTTGCCTTCACAGG 60.825 55.000 26.45 14.01 44.28 4.00
2238 2425 1.228675 AAGGCTTGCCTTCACAGGG 60.229 57.895 20.03 0.00 41.21 4.45
2244 2431 2.045536 GCCTTCACAGGGCTCCAG 60.046 66.667 0.00 0.00 45.57 3.86
2245 2432 2.045536 CCTTCACAGGGCTCCAGC 60.046 66.667 0.00 0.00 36.36 4.85
2246 2433 2.600729 CCTTCACAGGGCTCCAGCT 61.601 63.158 0.00 0.00 41.70 4.24
2247 2434 1.377994 CTTCACAGGGCTCCAGCTT 59.622 57.895 0.00 0.00 41.70 3.74
2248 2435 0.959372 CTTCACAGGGCTCCAGCTTG 60.959 60.000 0.00 0.79 41.70 4.01
2249 2436 1.418097 TTCACAGGGCTCCAGCTTGA 61.418 55.000 9.59 0.00 41.70 3.02
2250 2437 1.673665 CACAGGGCTCCAGCTTGAC 60.674 63.158 9.59 0.00 41.70 3.18
2251 2438 1.845205 ACAGGGCTCCAGCTTGACT 60.845 57.895 9.59 0.00 41.70 3.41
2252 2439 1.377994 CAGGGCTCCAGCTTGACTT 59.622 57.895 0.00 0.00 41.70 3.01
2253 2440 0.959372 CAGGGCTCCAGCTTGACTTG 60.959 60.000 0.00 0.00 41.70 3.16
2254 2441 1.073897 GGGCTCCAGCTTGACTTGT 59.926 57.895 0.00 0.00 41.70 3.16
2255 2442 0.957888 GGGCTCCAGCTTGACTTGTC 60.958 60.000 0.00 0.00 41.70 3.18
2256 2443 0.250467 GGCTCCAGCTTGACTTGTCA 60.250 55.000 0.00 0.00 41.70 3.58
2257 2444 1.612726 GGCTCCAGCTTGACTTGTCAT 60.613 52.381 4.18 0.00 41.70 3.06
2258 2445 1.736681 GCTCCAGCTTGACTTGTCATC 59.263 52.381 4.18 0.66 38.21 2.92
2259 2446 2.873245 GCTCCAGCTTGACTTGTCATCA 60.873 50.000 4.18 0.00 38.21 3.07
2260 2447 3.607741 CTCCAGCTTGACTTGTCATCAT 58.392 45.455 4.18 0.00 0.00 2.45
2261 2448 3.340928 TCCAGCTTGACTTGTCATCATG 58.659 45.455 4.18 4.04 0.00 3.07
2262 2449 2.422479 CCAGCTTGACTTGTCATCATGG 59.578 50.000 4.18 8.72 0.00 3.66
2263 2450 2.089980 AGCTTGACTTGTCATCATGGC 58.910 47.619 4.18 5.12 0.00 4.40
2264 2451 2.089980 GCTTGACTTGTCATCATGGCT 58.910 47.619 4.18 0.00 0.00 4.75
2265 2452 3.054875 AGCTTGACTTGTCATCATGGCTA 60.055 43.478 4.18 0.00 35.31 3.93
2266 2453 3.064545 GCTTGACTTGTCATCATGGCTAC 59.935 47.826 4.18 0.00 0.00 3.58
2267 2454 3.979101 TGACTTGTCATCATGGCTACA 57.021 42.857 0.00 0.00 0.00 2.74
2268 2455 3.599343 TGACTTGTCATCATGGCTACAC 58.401 45.455 0.00 0.00 0.00 2.90
2269 2456 3.261643 TGACTTGTCATCATGGCTACACT 59.738 43.478 0.00 0.00 0.00 3.55
2270 2457 4.466015 TGACTTGTCATCATGGCTACACTA 59.534 41.667 0.00 0.00 0.00 2.74
2271 2458 5.129320 TGACTTGTCATCATGGCTACACTAT 59.871 40.000 0.00 0.00 0.00 2.12
2272 2459 5.994250 ACTTGTCATCATGGCTACACTATT 58.006 37.500 0.00 0.00 0.00 1.73
2273 2460 6.418101 ACTTGTCATCATGGCTACACTATTT 58.582 36.000 0.00 0.00 0.00 1.40
2274 2461 6.886459 ACTTGTCATCATGGCTACACTATTTT 59.114 34.615 0.00 0.00 0.00 1.82
2275 2462 6.925610 TGTCATCATGGCTACACTATTTTC 57.074 37.500 0.00 0.00 0.00 2.29
2276 2463 6.413892 TGTCATCATGGCTACACTATTTTCA 58.586 36.000 0.00 0.00 0.00 2.69
2277 2464 7.056006 TGTCATCATGGCTACACTATTTTCAT 58.944 34.615 0.00 0.00 0.00 2.57
2278 2465 7.227314 TGTCATCATGGCTACACTATTTTCATC 59.773 37.037 0.00 0.00 0.00 2.92
2279 2466 7.227314 GTCATCATGGCTACACTATTTTCATCA 59.773 37.037 0.00 0.00 0.00 3.07
2280 2467 7.774625 TCATCATGGCTACACTATTTTCATCAA 59.225 33.333 0.00 0.00 0.00 2.57
2281 2468 7.936496 TCATGGCTACACTATTTTCATCAAA 57.064 32.000 0.00 0.00 0.00 2.69
2282 2469 7.988737 TCATGGCTACACTATTTTCATCAAAG 58.011 34.615 0.00 0.00 0.00 2.77
2283 2470 6.194796 TGGCTACACTATTTTCATCAAAGC 57.805 37.500 0.00 0.00 0.00 3.51
2284 2471 5.709631 TGGCTACACTATTTTCATCAAAGCA 59.290 36.000 0.00 0.00 0.00 3.91
2285 2472 6.208402 TGGCTACACTATTTTCATCAAAGCAA 59.792 34.615 0.00 0.00 0.00 3.91
2286 2473 6.528072 GGCTACACTATTTTCATCAAAGCAAC 59.472 38.462 0.00 0.00 0.00 4.17
2287 2474 7.308435 GCTACACTATTTTCATCAAAGCAACT 58.692 34.615 0.00 0.00 0.00 3.16
2288 2475 7.483059 GCTACACTATTTTCATCAAAGCAACTC 59.517 37.037 0.00 0.00 0.00 3.01
2289 2476 7.516198 ACACTATTTTCATCAAAGCAACTCT 57.484 32.000 0.00 0.00 0.00 3.24
2290 2477 7.945134 ACACTATTTTCATCAAAGCAACTCTT 58.055 30.769 0.00 0.00 36.34 2.85
2291 2478 8.078596 ACACTATTTTCATCAAAGCAACTCTTC 58.921 33.333 0.00 0.00 32.88 2.87
2292 2479 8.295288 CACTATTTTCATCAAAGCAACTCTTCT 58.705 33.333 0.00 0.00 32.88 2.85
2293 2480 8.854117 ACTATTTTCATCAAAGCAACTCTTCTT 58.146 29.630 0.00 0.00 32.88 2.52
2296 2483 9.688592 ATTTTCATCAAAGCAACTCTTCTTAAG 57.311 29.630 0.00 0.00 32.88 1.85
2297 2484 8.450578 TTTCATCAAAGCAACTCTTCTTAAGA 57.549 30.769 0.00 0.00 32.88 2.10
2298 2485 8.450578 TTCATCAAAGCAACTCTTCTTAAGAA 57.549 30.769 16.85 16.85 37.02 2.52
2317 2504 2.370403 ACCCCTTGGTCCCCACAA 60.370 61.111 0.00 0.00 43.06 3.33
2318 2505 2.117423 CCCCTTGGTCCCCACAAC 59.883 66.667 0.00 0.00 30.78 3.32
2319 2506 2.282180 CCCTTGGTCCCCACAACG 60.282 66.667 0.00 0.00 30.78 4.10
2320 2507 2.824880 CCCTTGGTCCCCACAACGA 61.825 63.158 0.00 0.00 30.78 3.85
2321 2508 1.149627 CCTTGGTCCCCACAACGAA 59.850 57.895 0.00 0.00 30.78 3.85
2322 2509 0.889186 CCTTGGTCCCCACAACGAAG 60.889 60.000 0.00 0.00 33.69 3.79
2323 2510 0.179029 CTTGGTCCCCACAACGAAGT 60.179 55.000 0.00 0.00 35.54 3.01
2338 2525 4.722361 ACGAAGTTCCTCCATAGAGAAC 57.278 45.455 0.00 0.00 37.78 3.01
2339 2526 3.447944 ACGAAGTTCCTCCATAGAGAACC 59.552 47.826 0.00 0.00 37.78 3.62
2340 2527 3.181474 CGAAGTTCCTCCATAGAGAACCC 60.181 52.174 0.00 0.00 43.39 4.11
2341 2528 2.389715 AGTTCCTCCATAGAGAACCCG 58.610 52.381 0.00 0.00 43.39 5.28
2342 2529 1.413077 GTTCCTCCATAGAGAACCCGG 59.587 57.143 0.00 0.00 43.39 5.73
2343 2530 0.635009 TCCTCCATAGAGAACCCGGT 59.365 55.000 0.00 0.00 43.39 5.28
2344 2531 1.007963 TCCTCCATAGAGAACCCGGTT 59.992 52.381 1.22 1.22 43.39 4.44
2345 2532 1.838077 CCTCCATAGAGAACCCGGTTT 59.162 52.381 3.77 0.00 43.39 3.27
2346 2533 2.420129 CCTCCATAGAGAACCCGGTTTG 60.420 54.545 3.77 0.00 43.39 2.93
2347 2534 2.500098 CTCCATAGAGAACCCGGTTTGA 59.500 50.000 3.77 0.00 43.39 2.69
2348 2535 3.112263 TCCATAGAGAACCCGGTTTGAT 58.888 45.455 3.77 0.00 0.00 2.57
2349 2536 4.291792 TCCATAGAGAACCCGGTTTGATA 58.708 43.478 3.77 0.00 0.00 2.15
2350 2537 4.905456 TCCATAGAGAACCCGGTTTGATAT 59.095 41.667 3.77 0.84 0.00 1.63
2351 2538 6.079336 TCCATAGAGAACCCGGTTTGATATA 58.921 40.000 3.77 0.00 0.00 0.86
2352 2539 6.210784 TCCATAGAGAACCCGGTTTGATATAG 59.789 42.308 3.77 0.00 0.00 1.31
2353 2540 4.338379 AGAGAACCCGGTTTGATATAGC 57.662 45.455 3.77 0.00 0.00 2.97
2354 2541 3.967987 AGAGAACCCGGTTTGATATAGCT 59.032 43.478 3.77 0.00 0.00 3.32
2355 2542 5.145564 AGAGAACCCGGTTTGATATAGCTA 58.854 41.667 3.77 0.00 0.00 3.32
2356 2543 5.010820 AGAGAACCCGGTTTGATATAGCTAC 59.989 44.000 3.77 0.00 0.00 3.58
2357 2544 4.900054 AGAACCCGGTTTGATATAGCTACT 59.100 41.667 3.77 0.00 0.00 2.57
2358 2545 6.073314 AGAACCCGGTTTGATATAGCTACTA 58.927 40.000 3.77 0.00 0.00 1.82
2359 2546 5.979288 ACCCGGTTTGATATAGCTACTAG 57.021 43.478 0.00 0.00 0.00 2.57
2360 2547 5.638133 ACCCGGTTTGATATAGCTACTAGA 58.362 41.667 0.00 0.00 0.00 2.43
2361 2548 5.711036 ACCCGGTTTGATATAGCTACTAGAG 59.289 44.000 0.00 0.00 0.00 2.43
2362 2549 5.944599 CCCGGTTTGATATAGCTACTAGAGA 59.055 44.000 0.00 0.00 0.00 3.10
2363 2550 6.433404 CCCGGTTTGATATAGCTACTAGAGAA 59.567 42.308 0.00 0.00 0.00 2.87
2364 2551 7.306953 CCGGTTTGATATAGCTACTAGAGAAC 58.693 42.308 0.00 0.00 0.00 3.01
2365 2552 7.306953 CGGTTTGATATAGCTACTAGAGAACC 58.693 42.308 0.00 6.18 0.00 3.62
2366 2553 7.175293 CGGTTTGATATAGCTACTAGAGAACCT 59.825 40.741 17.47 0.00 0.00 3.50
2367 2554 8.301002 GGTTTGATATAGCTACTAGAGAACCTG 58.699 40.741 14.62 0.00 0.00 4.00
2368 2555 8.301002 GTTTGATATAGCTACTAGAGAACCTGG 58.699 40.741 0.00 0.00 0.00 4.45
2369 2556 7.331089 TGATATAGCTACTAGAGAACCTGGA 57.669 40.000 0.00 0.00 0.00 3.86
2370 2557 7.398829 TGATATAGCTACTAGAGAACCTGGAG 58.601 42.308 0.00 0.00 0.00 3.86
2371 2558 3.306472 AGCTACTAGAGAACCTGGAGG 57.694 52.381 0.00 0.00 42.17 4.30
2372 2559 1.684450 GCTACTAGAGAACCTGGAGGC 59.316 57.143 0.00 0.00 39.32 4.70
2373 2560 2.950874 GCTACTAGAGAACCTGGAGGCA 60.951 54.545 0.00 0.00 39.32 4.75
2374 2561 1.562783 ACTAGAGAACCTGGAGGCAC 58.437 55.000 0.00 0.00 39.32 5.01
2394 2581 7.856415 AGGCACTCTCTGAAAATAAGTATTCT 58.144 34.615 0.00 0.00 0.00 2.40
2395 2582 8.325046 AGGCACTCTCTGAAAATAAGTATTCTT 58.675 33.333 0.00 0.00 37.65 2.52
2396 2583 8.608317 GGCACTCTCTGAAAATAAGTATTCTTC 58.392 37.037 0.00 0.00 35.36 2.87
2397 2584 9.155975 GCACTCTCTGAAAATAAGTATTCTTCA 57.844 33.333 0.00 7.68 35.36 3.02
2417 2604 9.889128 TTCTTCATATGACATGTGAATAGACAA 57.111 29.630 22.99 11.35 39.22 3.18
2418 2605 9.317936 TCTTCATATGACATGTGAATAGACAAC 57.682 33.333 22.99 0.00 39.22 3.32
2419 2606 9.322773 CTTCATATGACATGTGAATAGACAACT 57.677 33.333 22.99 0.00 39.22 3.16
2420 2607 8.877808 TCATATGACATGTGAATAGACAACTC 57.122 34.615 12.02 0.00 0.00 3.01
2421 2608 7.928167 TCATATGACATGTGAATAGACAACTCC 59.072 37.037 12.02 0.00 0.00 3.85
2422 2609 5.745312 TGACATGTGAATAGACAACTCCT 57.255 39.130 1.15 0.00 0.00 3.69
2423 2610 5.482006 TGACATGTGAATAGACAACTCCTG 58.518 41.667 1.15 0.00 0.00 3.86
2424 2611 4.836825 ACATGTGAATAGACAACTCCTGG 58.163 43.478 0.00 0.00 0.00 4.45
2425 2612 4.287067 ACATGTGAATAGACAACTCCTGGT 59.713 41.667 0.00 0.00 0.00 4.00
2426 2613 5.483937 ACATGTGAATAGACAACTCCTGGTA 59.516 40.000 0.00 0.00 0.00 3.25
2427 2614 6.156949 ACATGTGAATAGACAACTCCTGGTAT 59.843 38.462 0.00 0.00 0.00 2.73
2428 2615 5.977635 TGTGAATAGACAACTCCTGGTATG 58.022 41.667 0.00 0.00 0.00 2.39
2429 2616 4.811557 GTGAATAGACAACTCCTGGTATGC 59.188 45.833 0.00 0.00 0.00 3.14
2430 2617 4.716784 TGAATAGACAACTCCTGGTATGCT 59.283 41.667 0.00 0.00 0.00 3.79
2431 2618 4.946478 ATAGACAACTCCTGGTATGCTC 57.054 45.455 0.00 0.00 0.00 4.26
2432 2619 2.540383 AGACAACTCCTGGTATGCTCA 58.460 47.619 0.00 0.00 0.00 4.26
2433 2620 3.110705 AGACAACTCCTGGTATGCTCAT 58.889 45.455 0.00 0.00 0.00 2.90
2434 2621 3.521126 AGACAACTCCTGGTATGCTCATT 59.479 43.478 0.00 0.00 0.00 2.57
2435 2622 4.018960 AGACAACTCCTGGTATGCTCATTT 60.019 41.667 0.00 0.00 0.00 2.32
2436 2623 4.265073 ACAACTCCTGGTATGCTCATTTC 58.735 43.478 0.00 0.00 0.00 2.17
2437 2624 4.263462 ACAACTCCTGGTATGCTCATTTCA 60.263 41.667 0.00 0.00 0.00 2.69
2438 2625 4.785346 ACTCCTGGTATGCTCATTTCAT 57.215 40.909 0.00 0.00 0.00 2.57
2439 2626 5.121380 ACTCCTGGTATGCTCATTTCATT 57.879 39.130 0.00 0.00 0.00 2.57
2440 2627 5.128919 ACTCCTGGTATGCTCATTTCATTC 58.871 41.667 0.00 0.00 0.00 2.67
2441 2628 4.464008 TCCTGGTATGCTCATTTCATTCC 58.536 43.478 0.00 0.00 33.58 3.01
2442 2629 4.166725 TCCTGGTATGCTCATTTCATTCCT 59.833 41.667 0.00 0.00 33.96 3.36
2443 2630 4.518211 CCTGGTATGCTCATTTCATTCCTC 59.482 45.833 0.00 0.00 33.96 3.71
2444 2631 5.374921 CTGGTATGCTCATTTCATTCCTCT 58.625 41.667 0.00 0.00 33.96 3.69
2445 2632 5.759059 TGGTATGCTCATTTCATTCCTCTT 58.241 37.500 0.00 0.00 33.96 2.85
2446 2633 5.591472 TGGTATGCTCATTTCATTCCTCTTG 59.409 40.000 0.00 0.00 33.96 3.02
2447 2634 5.009410 GGTATGCTCATTTCATTCCTCTTGG 59.991 44.000 0.00 0.00 31.26 3.61
2448 2635 4.305539 TGCTCATTTCATTCCTCTTGGA 57.694 40.909 0.00 0.00 41.36 3.53
2449 2636 4.012374 TGCTCATTTCATTCCTCTTGGAC 58.988 43.478 0.00 0.00 43.06 4.02
2450 2637 3.379688 GCTCATTTCATTCCTCTTGGACC 59.620 47.826 0.00 0.00 43.06 4.46
2451 2638 4.853007 CTCATTTCATTCCTCTTGGACCT 58.147 43.478 0.00 0.00 43.06 3.85
2452 2639 5.630069 GCTCATTTCATTCCTCTTGGACCTA 60.630 44.000 0.00 0.00 43.06 3.08
2453 2640 5.994250 TCATTTCATTCCTCTTGGACCTAG 58.006 41.667 0.00 0.00 43.06 3.02
2454 2641 5.726308 TCATTTCATTCCTCTTGGACCTAGA 59.274 40.000 5.49 5.49 43.06 2.43
2455 2642 6.388100 TCATTTCATTCCTCTTGGACCTAGAT 59.612 38.462 6.08 0.00 43.06 1.98
2456 2643 5.878406 TTCATTCCTCTTGGACCTAGATC 57.122 43.478 6.08 0.00 43.06 2.75
2457 2644 5.149584 TCATTCCTCTTGGACCTAGATCT 57.850 43.478 6.08 0.00 43.06 2.75
2458 2645 5.533112 TCATTCCTCTTGGACCTAGATCTT 58.467 41.667 6.08 0.00 43.06 2.40
2459 2646 5.600484 TCATTCCTCTTGGACCTAGATCTTC 59.400 44.000 6.08 0.00 43.06 2.87
2460 2647 4.609866 TCCTCTTGGACCTAGATCTTCA 57.390 45.455 6.08 0.00 37.46 3.02
2461 2648 4.282496 TCCTCTTGGACCTAGATCTTCAC 58.718 47.826 6.08 0.00 37.46 3.18
2462 2649 4.017037 TCCTCTTGGACCTAGATCTTCACT 60.017 45.833 6.08 0.00 37.46 3.41
2463 2650 4.714308 CCTCTTGGACCTAGATCTTCACTT 59.286 45.833 6.08 0.00 34.57 3.16
2464 2651 5.188751 CCTCTTGGACCTAGATCTTCACTTT 59.811 44.000 6.08 0.00 34.57 2.66
2465 2652 6.287589 TCTTGGACCTAGATCTTCACTTTC 57.712 41.667 0.00 0.00 0.00 2.62
2466 2653 5.780282 TCTTGGACCTAGATCTTCACTTTCA 59.220 40.000 0.00 0.00 0.00 2.69
2467 2654 6.270000 TCTTGGACCTAGATCTTCACTTTCAA 59.730 38.462 0.00 0.00 0.00 2.69
2468 2655 6.433847 TGGACCTAGATCTTCACTTTCAAA 57.566 37.500 0.00 0.00 0.00 2.69
2469 2656 6.837312 TGGACCTAGATCTTCACTTTCAAAA 58.163 36.000 0.00 0.00 0.00 2.44
2470 2657 6.936900 TGGACCTAGATCTTCACTTTCAAAAG 59.063 38.462 0.00 0.97 41.73 2.27
2546 2733 1.014352 GCTGGGATCGCAATTTACGT 58.986 50.000 14.01 0.00 0.00 3.57
2561 2748 7.306399 CGCAATTTACGTATCTAACCAACCTAG 60.306 40.741 0.00 0.00 0.00 3.02
2567 2754 0.420272 TCTAACCAACCTAGGCCCCT 59.580 55.000 9.30 0.00 0.00 4.79
2571 2758 2.231380 CCAACCTAGGCCCCTGTGT 61.231 63.158 9.30 0.00 0.00 3.72
2594 2782 0.893270 TTTGACGAGTTGCATGGGGG 60.893 55.000 0.00 0.00 0.00 5.40
2615 2803 2.046285 CCCAGTTGATTGTCGGGGC 61.046 63.158 0.00 0.00 32.94 5.80
2618 2806 0.609131 CAGTTGATTGTCGGGGCCTT 60.609 55.000 0.84 0.00 0.00 4.35
2644 2835 2.093128 ACCTATTACTTTCCCCGCACTG 60.093 50.000 0.00 0.00 0.00 3.66
2666 2857 0.603569 GTCATAGGCGGATGTCGGAT 59.396 55.000 2.94 0.00 39.69 4.18
2668 2859 0.603065 CATAGGCGGATGTCGGATCA 59.397 55.000 0.00 0.00 39.69 2.92
2677 2868 1.860950 GATGTCGGATCAATGGTGACG 59.139 52.381 0.00 0.00 36.31 4.35
2682 2873 1.393539 CGGATCAATGGTGACGACAAC 59.606 52.381 0.00 0.00 36.31 3.32
2783 2974 1.952621 TAGCTAGGTTGAGCAGGGTT 58.047 50.000 0.00 0.00 45.43 4.11
2785 2976 0.678048 GCTAGGTTGAGCAGGGTTGG 60.678 60.000 0.00 0.00 42.36 3.77
2787 2978 2.463589 TAGGTTGAGCAGGGTTGGCG 62.464 60.000 0.00 0.00 36.08 5.69
2846 3037 3.711704 TCTCCTTGGATTAGTAGCCTTGG 59.288 47.826 0.00 0.00 0.00 3.61
2856 3047 1.462432 TAGCCTTGGACACCCCACA 60.462 57.895 0.00 0.00 46.62 4.17
2870 3061 2.173143 ACCCCACAAGTAGAAAAACGGA 59.827 45.455 0.00 0.00 0.00 4.69
2890 3081 2.154462 ACATTAGCAGTGTGCCAAGAC 58.846 47.619 0.00 0.00 46.52 3.01
2891 3082 2.153645 CATTAGCAGTGTGCCAAGACA 58.846 47.619 0.00 0.00 46.52 3.41
2892 3083 1.882912 TTAGCAGTGTGCCAAGACAG 58.117 50.000 0.00 0.00 46.52 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
155 158 5.874261 CACAATGTCCTGGTTGAAACTTTTT 59.126 36.000 2.86 0.00 0.00 1.94
193 196 3.192633 AGCTTTTTCTGTCAACGGTTGTT 59.807 39.130 19.47 0.00 39.43 2.83
647 675 1.885157 CCGTGGATGTTGCATGCTT 59.115 52.632 20.33 0.66 0.00 3.91
732 776 0.534427 TCCGTCCGATCGTCTAGCAT 60.534 55.000 15.09 0.00 0.00 3.79
789 834 0.524414 GCACCGGCCTAAAATTTCGT 59.476 50.000 0.00 0.00 0.00 3.85
832 877 3.541632 TCCGATCTTGTATCCCTTTTGC 58.458 45.455 0.00 0.00 0.00 3.68
833 878 5.023533 TCTCCGATCTTGTATCCCTTTTG 57.976 43.478 0.00 0.00 0.00 2.44
834 879 5.896073 ATCTCCGATCTTGTATCCCTTTT 57.104 39.130 0.00 0.00 0.00 2.27
835 880 6.315714 TCTATCTCCGATCTTGTATCCCTTT 58.684 40.000 0.00 0.00 0.00 3.11
836 881 5.893500 TCTATCTCCGATCTTGTATCCCTT 58.106 41.667 0.00 0.00 0.00 3.95
837 882 5.522315 TCTATCTCCGATCTTGTATCCCT 57.478 43.478 0.00 0.00 0.00 4.20
838 883 6.015350 TGTTTCTATCTCCGATCTTGTATCCC 60.015 42.308 0.00 0.00 0.00 3.85
839 884 6.982852 TGTTTCTATCTCCGATCTTGTATCC 58.017 40.000 0.00 0.00 0.00 2.59
840 885 7.806014 GTCTGTTTCTATCTCCGATCTTGTATC 59.194 40.741 0.00 0.00 0.00 2.24
841 886 7.255660 GGTCTGTTTCTATCTCCGATCTTGTAT 60.256 40.741 0.00 0.00 0.00 2.29
842 887 6.039493 GGTCTGTTTCTATCTCCGATCTTGTA 59.961 42.308 0.00 0.00 0.00 2.41
843 888 5.163499 GGTCTGTTTCTATCTCCGATCTTGT 60.163 44.000 0.00 0.00 0.00 3.16
844 889 5.285651 GGTCTGTTTCTATCTCCGATCTTG 58.714 45.833 0.00 0.00 0.00 3.02
845 890 4.342665 GGGTCTGTTTCTATCTCCGATCTT 59.657 45.833 0.00 0.00 0.00 2.40
913 964 1.390565 ACTGCTAGTACTGCCTACGG 58.609 55.000 5.39 0.00 0.00 4.02
956 1022 2.671396 CGCACCGTTATATATCCAAGGC 59.329 50.000 0.00 0.00 0.00 4.35
957 1023 3.259064 CCGCACCGTTATATATCCAAGG 58.741 50.000 0.00 0.00 0.00 3.61
958 1024 2.671396 GCCGCACCGTTATATATCCAAG 59.329 50.000 0.00 0.00 0.00 3.61
959 1025 2.037381 TGCCGCACCGTTATATATCCAA 59.963 45.455 0.00 0.00 0.00 3.53
960 1026 1.619332 TGCCGCACCGTTATATATCCA 59.381 47.619 0.00 0.00 0.00 3.41
961 1027 1.997606 GTGCCGCACCGTTATATATCC 59.002 52.381 12.80 0.00 0.00 2.59
962 1028 1.652124 CGTGCCGCACCGTTATATATC 59.348 52.381 17.81 0.00 0.00 1.63
963 1029 1.000060 ACGTGCCGCACCGTTATATAT 60.000 47.619 17.81 0.00 0.00 0.86
964 1030 0.385029 ACGTGCCGCACCGTTATATA 59.615 50.000 17.81 0.00 0.00 0.86
965 1031 0.385029 TACGTGCCGCACCGTTATAT 59.615 50.000 17.81 0.38 0.00 0.86
966 1032 0.525242 GTACGTGCCGCACCGTTATA 60.525 55.000 17.81 2.31 0.00 0.98
967 1033 1.806758 GTACGTGCCGCACCGTTAT 60.807 57.895 17.81 1.53 0.00 1.89
968 1034 2.430582 GTACGTGCCGCACCGTTA 60.431 61.111 17.81 4.18 0.00 3.18
978 1044 3.475774 CGTCCAAGGCGTACGTGC 61.476 66.667 17.90 0.00 32.16 5.34
981 1047 2.090524 GGAACGTCCAAGGCGTACG 61.091 63.158 11.84 11.84 42.10 3.67
982 1048 1.005867 TGGAACGTCCAAGGCGTAC 60.006 57.895 8.54 6.44 45.00 3.67
983 1049 3.457484 TGGAACGTCCAAGGCGTA 58.543 55.556 8.54 0.00 45.00 4.42
1005 1078 0.028374 CGTTTGTTTTCTCGGCGGTT 59.972 50.000 7.21 0.00 0.00 4.44
1059 1132 2.256764 CTCGCTGATCGGATCGGG 59.743 66.667 24.31 19.37 39.05 5.14
1340 1480 0.108804 AACATGAACTCGACGCGGAT 60.109 50.000 12.47 0.00 0.00 4.18
1355 1495 0.534412 CGAGAGACCAGGCTGAACAT 59.466 55.000 17.94 0.00 0.00 2.71
1356 1496 1.967535 CGAGAGACCAGGCTGAACA 59.032 57.895 17.94 0.00 0.00 3.18
1441 1605 4.189188 CCCCAGTACTCGACGCCG 62.189 72.222 0.00 0.00 37.07 6.46
1488 1652 3.066814 ACAGGTACTCCGGCGACC 61.067 66.667 9.30 8.13 34.60 4.79
1519 1684 0.678950 TGATCTCACACCGCAAGACA 59.321 50.000 0.00 0.00 43.02 3.41
1784 1965 4.389992 ACATAACACTCTCAGCGACAATTG 59.610 41.667 3.24 3.24 0.00 2.32
1809 1990 3.560636 ACCTGGCCTACACATCAATAC 57.439 47.619 3.32 0.00 0.00 1.89
1811 1992 2.578021 AGAACCTGGCCTACACATCAAT 59.422 45.455 3.32 0.00 0.00 2.57
1812 1993 1.985159 AGAACCTGGCCTACACATCAA 59.015 47.619 3.32 0.00 0.00 2.57
1970 2157 2.807392 GTCCAATTGTTTGCCCATTGTG 59.193 45.455 4.43 0.00 0.00 3.33
1988 2175 6.211515 TCTTTTTACTAGTCGTTCTGTGTCC 58.788 40.000 0.00 0.00 0.00 4.02
2019 2206 5.007385 AGGATAGTACGATTTTCAGCGTT 57.993 39.130 0.00 0.00 41.49 4.84
2022 2209 7.868415 ACTATGAAGGATAGTACGATTTTCAGC 59.132 37.037 16.16 0.00 44.74 4.26
2044 2231 7.015292 ACCCGTAGACATTTGATCATGTACTAT 59.985 37.037 1.94 0.00 37.52 2.12
2052 2239 3.259625 TGACACCCGTAGACATTTGATCA 59.740 43.478 0.00 0.00 0.00 2.92
2053 2240 3.857052 TGACACCCGTAGACATTTGATC 58.143 45.455 0.00 0.00 0.00 2.92
2054 2241 3.973206 TGACACCCGTAGACATTTGAT 57.027 42.857 0.00 0.00 0.00 2.57
2055 2242 3.973206 ATGACACCCGTAGACATTTGA 57.027 42.857 0.00 0.00 0.00 2.69
2056 2243 6.677781 ATTAATGACACCCGTAGACATTTG 57.322 37.500 0.00 0.00 33.99 2.32
2057 2244 8.208224 TGATATTAATGACACCCGTAGACATTT 58.792 33.333 0.00 0.00 33.99 2.32
2058 2245 7.732025 TGATATTAATGACACCCGTAGACATT 58.268 34.615 0.00 0.00 35.73 2.71
2059 2246 7.297936 TGATATTAATGACACCCGTAGACAT 57.702 36.000 0.00 0.00 0.00 3.06
2060 2247 6.718522 TGATATTAATGACACCCGTAGACA 57.281 37.500 0.00 0.00 0.00 3.41
2061 2248 7.974501 CCTATGATATTAATGACACCCGTAGAC 59.025 40.741 0.00 0.00 0.00 2.59
2062 2249 7.123697 CCCTATGATATTAATGACACCCGTAGA 59.876 40.741 0.00 0.00 0.00 2.59
2063 2250 7.093465 ACCCTATGATATTAATGACACCCGTAG 60.093 40.741 0.00 0.00 0.00 3.51
2064 2251 6.727231 ACCCTATGATATTAATGACACCCGTA 59.273 38.462 0.00 0.00 0.00 4.02
2065 2252 5.546499 ACCCTATGATATTAATGACACCCGT 59.454 40.000 0.00 0.00 0.00 5.28
2066 2253 6.049955 ACCCTATGATATTAATGACACCCG 57.950 41.667 0.00 0.00 0.00 5.28
2067 2254 7.039882 CGTACCCTATGATATTAATGACACCC 58.960 42.308 0.00 0.00 0.00 4.61
2068 2255 7.833786 TCGTACCCTATGATATTAATGACACC 58.166 38.462 0.00 0.00 0.00 4.16
2069 2256 9.136952 GTTCGTACCCTATGATATTAATGACAC 57.863 37.037 0.00 0.00 0.00 3.67
2070 2257 9.085645 AGTTCGTACCCTATGATATTAATGACA 57.914 33.333 0.00 0.00 0.00 3.58
2071 2258 9.924650 AAGTTCGTACCCTATGATATTAATGAC 57.075 33.333 0.00 0.00 0.00 3.06
2077 2264 8.804204 CCTTAGAAGTTCGTACCCTATGATATT 58.196 37.037 0.00 0.00 0.00 1.28
2078 2265 7.949006 ACCTTAGAAGTTCGTACCCTATGATAT 59.051 37.037 0.00 0.00 0.00 1.63
2079 2266 7.293073 ACCTTAGAAGTTCGTACCCTATGATA 58.707 38.462 0.00 0.00 0.00 2.15
2080 2267 6.134754 ACCTTAGAAGTTCGTACCCTATGAT 58.865 40.000 0.00 0.00 0.00 2.45
2081 2268 5.513233 ACCTTAGAAGTTCGTACCCTATGA 58.487 41.667 0.00 0.00 0.00 2.15
2082 2269 5.359009 TGACCTTAGAAGTTCGTACCCTATG 59.641 44.000 0.00 0.00 0.00 2.23
2083 2270 5.513233 TGACCTTAGAAGTTCGTACCCTAT 58.487 41.667 0.00 0.00 0.00 2.57
2084 2271 4.922206 TGACCTTAGAAGTTCGTACCCTA 58.078 43.478 0.00 0.00 0.00 3.53
2085 2272 3.771216 TGACCTTAGAAGTTCGTACCCT 58.229 45.455 0.00 0.00 0.00 4.34
2086 2273 4.430908 CATGACCTTAGAAGTTCGTACCC 58.569 47.826 0.00 0.00 0.00 3.69
2087 2274 4.430908 CCATGACCTTAGAAGTTCGTACC 58.569 47.826 0.00 0.00 0.00 3.34
2088 2275 3.864003 GCCATGACCTTAGAAGTTCGTAC 59.136 47.826 0.00 0.00 0.00 3.67
2089 2276 3.428452 CGCCATGACCTTAGAAGTTCGTA 60.428 47.826 0.00 0.00 0.00 3.43
2090 2277 2.674177 CGCCATGACCTTAGAAGTTCGT 60.674 50.000 0.00 0.00 0.00 3.85
2091 2278 1.927174 CGCCATGACCTTAGAAGTTCG 59.073 52.381 0.00 0.00 0.00 3.95
2092 2279 2.973945 ACGCCATGACCTTAGAAGTTC 58.026 47.619 0.00 0.00 0.00 3.01
2093 2280 3.118738 CCTACGCCATGACCTTAGAAGTT 60.119 47.826 0.00 0.00 0.00 2.66
2094 2281 2.431057 CCTACGCCATGACCTTAGAAGT 59.569 50.000 0.00 0.00 0.00 3.01
2095 2282 2.224066 CCCTACGCCATGACCTTAGAAG 60.224 54.545 0.00 0.00 0.00 2.85
2096 2283 1.760613 CCCTACGCCATGACCTTAGAA 59.239 52.381 0.00 0.00 0.00 2.10
2097 2284 1.342674 ACCCTACGCCATGACCTTAGA 60.343 52.381 0.00 0.00 0.00 2.10
2098 2285 1.120530 ACCCTACGCCATGACCTTAG 58.879 55.000 0.00 0.00 0.00 2.18
2099 2286 2.457813 TACCCTACGCCATGACCTTA 57.542 50.000 0.00 0.00 0.00 2.69
2100 2287 1.802553 ATACCCTACGCCATGACCTT 58.197 50.000 0.00 0.00 0.00 3.50
2101 2288 1.416401 CAATACCCTACGCCATGACCT 59.584 52.381 0.00 0.00 0.00 3.85
2102 2289 1.542547 CCAATACCCTACGCCATGACC 60.543 57.143 0.00 0.00 0.00 4.02
2103 2290 1.414919 TCCAATACCCTACGCCATGAC 59.585 52.381 0.00 0.00 0.00 3.06
2104 2291 1.796017 TCCAATACCCTACGCCATGA 58.204 50.000 0.00 0.00 0.00 3.07
2105 2292 2.859165 ATCCAATACCCTACGCCATG 57.141 50.000 0.00 0.00 0.00 3.66
2106 2293 2.838202 CCTATCCAATACCCTACGCCAT 59.162 50.000 0.00 0.00 0.00 4.40
2107 2294 2.253610 CCTATCCAATACCCTACGCCA 58.746 52.381 0.00 0.00 0.00 5.69
2108 2295 1.066358 GCCTATCCAATACCCTACGCC 60.066 57.143 0.00 0.00 0.00 5.68
2109 2296 1.900486 AGCCTATCCAATACCCTACGC 59.100 52.381 0.00 0.00 0.00 4.42
2110 2297 2.233922 CCAGCCTATCCAATACCCTACG 59.766 54.545 0.00 0.00 0.00 3.51
2111 2298 3.248888 ACCAGCCTATCCAATACCCTAC 58.751 50.000 0.00 0.00 0.00 3.18
2112 2299 3.517612 GACCAGCCTATCCAATACCCTA 58.482 50.000 0.00 0.00 0.00 3.53
2113 2300 2.339769 GACCAGCCTATCCAATACCCT 58.660 52.381 0.00 0.00 0.00 4.34
2114 2301 1.351350 GGACCAGCCTATCCAATACCC 59.649 57.143 0.00 0.00 34.87 3.69
2115 2302 1.002087 CGGACCAGCCTATCCAATACC 59.998 57.143 0.00 0.00 34.35 2.73
2116 2303 1.608283 GCGGACCAGCCTATCCAATAC 60.608 57.143 0.00 0.00 34.35 1.89
2117 2304 0.685097 GCGGACCAGCCTATCCAATA 59.315 55.000 0.00 0.00 34.35 1.90
2118 2305 1.056700 AGCGGACCAGCCTATCCAAT 61.057 55.000 4.93 0.00 38.01 3.16
2119 2306 1.689233 AGCGGACCAGCCTATCCAA 60.689 57.895 4.93 0.00 38.01 3.53
2120 2307 2.041922 AGCGGACCAGCCTATCCA 60.042 61.111 4.93 0.00 38.01 3.41
2121 2308 2.423446 CAGCGGACCAGCCTATCC 59.577 66.667 4.93 0.00 38.01 2.59
2122 2309 2.370647 GACCAGCGGACCAGCCTATC 62.371 65.000 1.50 0.00 38.01 2.08
2123 2310 2.365635 ACCAGCGGACCAGCCTAT 60.366 61.111 1.50 0.00 38.01 2.57
2124 2311 3.075005 GACCAGCGGACCAGCCTA 61.075 66.667 1.50 0.00 38.01 3.93
2127 2314 4.373116 TTCGACCAGCGGACCAGC 62.373 66.667 1.50 0.00 41.33 4.85
2128 2315 2.125912 CTTCGACCAGCGGACCAG 60.126 66.667 1.50 0.00 41.33 4.00
2129 2316 2.915659 ACTTCGACCAGCGGACCA 60.916 61.111 1.50 0.00 41.33 4.02
2130 2317 2.126031 GACTTCGACCAGCGGACC 60.126 66.667 1.50 0.00 41.33 4.46
2131 2318 0.389948 AATGACTTCGACCAGCGGAC 60.390 55.000 1.50 0.00 41.33 4.79
2132 2319 0.389817 CAATGACTTCGACCAGCGGA 60.390 55.000 1.50 0.00 41.33 5.54
2133 2320 1.970917 GCAATGACTTCGACCAGCGG 61.971 60.000 0.00 0.00 41.33 5.52
2134 2321 1.291184 TGCAATGACTTCGACCAGCG 61.291 55.000 0.00 0.00 42.69 5.18
2135 2322 0.445436 CTGCAATGACTTCGACCAGC 59.555 55.000 0.00 0.00 0.00 4.85
2136 2323 1.081892 CCTGCAATGACTTCGACCAG 58.918 55.000 0.00 0.00 0.00 4.00
2137 2324 0.321564 CCCTGCAATGACTTCGACCA 60.322 55.000 0.00 0.00 0.00 4.02
2138 2325 0.321653 ACCCTGCAATGACTTCGACC 60.322 55.000 0.00 0.00 0.00 4.79
2139 2326 0.798776 CACCCTGCAATGACTTCGAC 59.201 55.000 0.00 0.00 0.00 4.20
2140 2327 0.396435 ACACCCTGCAATGACTTCGA 59.604 50.000 0.00 0.00 0.00 3.71
2141 2328 1.732259 GTACACCCTGCAATGACTTCG 59.268 52.381 0.00 0.00 0.00 3.79
2142 2329 3.059352 AGTACACCCTGCAATGACTTC 57.941 47.619 0.00 0.00 0.00 3.01
2143 2330 3.616560 CGTAGTACACCCTGCAATGACTT 60.617 47.826 0.38 0.00 0.00 3.01
2144 2331 2.094182 CGTAGTACACCCTGCAATGACT 60.094 50.000 0.38 0.00 0.00 3.41
2145 2332 2.268298 CGTAGTACACCCTGCAATGAC 58.732 52.381 0.38 0.00 0.00 3.06
2146 2333 1.206132 CCGTAGTACACCCTGCAATGA 59.794 52.381 0.38 0.00 0.00 2.57
2147 2334 1.206132 TCCGTAGTACACCCTGCAATG 59.794 52.381 0.38 0.00 0.00 2.82
2148 2335 1.206371 GTCCGTAGTACACCCTGCAAT 59.794 52.381 0.38 0.00 0.00 3.56
2149 2336 0.604578 GTCCGTAGTACACCCTGCAA 59.395 55.000 0.38 0.00 0.00 4.08
2150 2337 0.540133 TGTCCGTAGTACACCCTGCA 60.540 55.000 0.38 0.00 0.00 4.41
2151 2338 0.172803 CTGTCCGTAGTACACCCTGC 59.827 60.000 0.38 0.00 0.00 4.85
2152 2339 0.172803 GCTGTCCGTAGTACACCCTG 59.827 60.000 0.38 0.00 0.00 4.45
2153 2340 0.039326 AGCTGTCCGTAGTACACCCT 59.961 55.000 0.38 0.00 0.00 4.34
2154 2341 1.755179 TAGCTGTCCGTAGTACACCC 58.245 55.000 0.00 0.00 0.00 4.61
2155 2342 3.129988 ACAATAGCTGTCCGTAGTACACC 59.870 47.826 0.00 0.00 29.87 4.16
2156 2343 4.367386 ACAATAGCTGTCCGTAGTACAC 57.633 45.455 0.00 0.00 29.87 2.90
2157 2344 4.142315 GGAACAATAGCTGTCCGTAGTACA 60.142 45.833 0.00 0.00 37.23 2.90
2158 2345 4.142315 TGGAACAATAGCTGTCCGTAGTAC 60.142 45.833 0.00 0.00 37.23 2.73
2159 2346 4.018490 TGGAACAATAGCTGTCCGTAGTA 58.982 43.478 0.00 0.00 37.23 1.82
2160 2347 2.829720 TGGAACAATAGCTGTCCGTAGT 59.170 45.455 0.00 0.00 37.23 2.73
2161 2348 3.448686 CTGGAACAATAGCTGTCCGTAG 58.551 50.000 0.00 0.00 37.23 3.51
2162 2349 2.167693 CCTGGAACAATAGCTGTCCGTA 59.832 50.000 0.00 0.00 37.23 4.02
2163 2350 1.066143 CCTGGAACAATAGCTGTCCGT 60.066 52.381 0.00 0.00 37.23 4.69
2164 2351 1.656652 CCTGGAACAATAGCTGTCCG 58.343 55.000 0.00 0.00 37.23 4.79
2165 2352 2.019156 GCCCTGGAACAATAGCTGTCC 61.019 57.143 0.00 0.00 37.23 4.02
2166 2353 1.065126 AGCCCTGGAACAATAGCTGTC 60.065 52.381 0.00 0.00 37.23 3.51
2167 2354 0.995024 AGCCCTGGAACAATAGCTGT 59.005 50.000 0.00 0.00 41.27 4.40
2168 2355 2.134789 AAGCCCTGGAACAATAGCTG 57.865 50.000 0.00 0.00 37.92 4.24
2169 2356 2.907458 AAAGCCCTGGAACAATAGCT 57.093 45.000 0.00 0.00 39.24 3.32
2170 2357 2.166459 GGAAAAGCCCTGGAACAATAGC 59.834 50.000 0.00 0.00 38.70 2.97
2171 2358 3.701664 AGGAAAAGCCCTGGAACAATAG 58.298 45.455 0.00 0.00 38.70 1.73
2172 2359 3.825908 AGGAAAAGCCCTGGAACAATA 57.174 42.857 0.00 0.00 38.70 1.90
2173 2360 2.702270 AGGAAAAGCCCTGGAACAAT 57.298 45.000 0.00 0.00 38.70 2.71
2174 2361 2.470057 AAGGAAAAGCCCTGGAACAA 57.530 45.000 0.00 0.00 38.70 2.83
2175 2362 2.091333 AGAAAGGAAAAGCCCTGGAACA 60.091 45.455 0.00 0.00 36.49 3.18
2176 2363 2.558795 GAGAAAGGAAAAGCCCTGGAAC 59.441 50.000 0.00 0.00 36.49 3.62
2177 2364 2.447047 AGAGAAAGGAAAAGCCCTGGAA 59.553 45.455 0.00 0.00 36.49 3.53
2178 2365 2.065799 AGAGAAAGGAAAAGCCCTGGA 58.934 47.619 0.00 0.00 36.49 3.86
2179 2366 2.560105 CAAGAGAAAGGAAAAGCCCTGG 59.440 50.000 0.00 0.00 36.49 4.45
2180 2367 3.225940 ACAAGAGAAAGGAAAAGCCCTG 58.774 45.455 0.00 0.00 36.49 4.45
2181 2368 3.117512 TGACAAGAGAAAGGAAAAGCCCT 60.118 43.478 0.00 0.00 38.42 5.19
2182 2369 3.222603 TGACAAGAGAAAGGAAAAGCCC 58.777 45.455 0.00 0.00 37.37 5.19
2183 2370 4.520492 TGATGACAAGAGAAAGGAAAAGCC 59.480 41.667 0.00 0.00 0.00 4.35
2184 2371 5.456265 GTGATGACAAGAGAAAGGAAAAGC 58.544 41.667 0.00 0.00 0.00 3.51
2185 2372 5.683859 CGTGATGACAAGAGAAAGGAAAAG 58.316 41.667 0.00 0.00 0.00 2.27
2186 2373 4.024048 GCGTGATGACAAGAGAAAGGAAAA 60.024 41.667 0.00 0.00 0.00 2.29
2187 2374 3.498397 GCGTGATGACAAGAGAAAGGAAA 59.502 43.478 0.00 0.00 0.00 3.13
2188 2375 3.067106 GCGTGATGACAAGAGAAAGGAA 58.933 45.455 0.00 0.00 0.00 3.36
2189 2376 2.612972 GGCGTGATGACAAGAGAAAGGA 60.613 50.000 0.00 0.00 0.00 3.36
2190 2377 1.734465 GGCGTGATGACAAGAGAAAGG 59.266 52.381 0.00 0.00 0.00 3.11
2191 2378 2.416747 TGGCGTGATGACAAGAGAAAG 58.583 47.619 0.00 0.00 26.81 2.62
2192 2379 2.542020 TGGCGTGATGACAAGAGAAA 57.458 45.000 0.00 0.00 26.81 2.52
2193 2380 2.542020 TTGGCGTGATGACAAGAGAA 57.458 45.000 0.00 0.00 41.98 2.87
2198 2385 2.482336 GTGTATGTTGGCGTGATGACAA 59.518 45.455 0.00 0.00 45.67 3.18
2199 2386 2.073056 GTGTATGTTGGCGTGATGACA 58.927 47.619 0.00 0.00 0.00 3.58
2200 2387 2.073056 TGTGTATGTTGGCGTGATGAC 58.927 47.619 0.00 0.00 0.00 3.06
2201 2388 2.464157 TGTGTATGTTGGCGTGATGA 57.536 45.000 0.00 0.00 0.00 2.92
2202 2389 2.159531 CCTTGTGTATGTTGGCGTGATG 60.160 50.000 0.00 0.00 0.00 3.07
2203 2390 2.083774 CCTTGTGTATGTTGGCGTGAT 58.916 47.619 0.00 0.00 0.00 3.06
2204 2391 1.518325 CCTTGTGTATGTTGGCGTGA 58.482 50.000 0.00 0.00 0.00 4.35
2205 2392 0.109781 GCCTTGTGTATGTTGGCGTG 60.110 55.000 0.00 0.00 33.96 5.34
2206 2393 2.253513 GCCTTGTGTATGTTGGCGT 58.746 52.632 0.00 0.00 33.96 5.68
2208 2395 1.669795 GCAAGCCTTGTGTATGTTGGC 60.670 52.381 6.28 0.00 43.52 4.52
2209 2396 1.067635 GGCAAGCCTTGTGTATGTTGG 60.068 52.381 6.28 0.00 0.00 3.77
2210 2397 1.888512 AGGCAAGCCTTGTGTATGTTG 59.111 47.619 8.02 0.00 45.70 3.33
2211 2398 2.292828 AGGCAAGCCTTGTGTATGTT 57.707 45.000 8.02 0.00 45.70 2.71
2228 2415 2.045536 GCTGGAGCCCTGTGAAGG 60.046 66.667 0.00 0.00 34.31 3.46
2229 2416 0.959372 CAAGCTGGAGCCCTGTGAAG 60.959 60.000 0.00 0.00 43.38 3.02
2230 2417 1.073722 CAAGCTGGAGCCCTGTGAA 59.926 57.895 0.00 0.00 43.38 3.18
2231 2418 1.842920 TCAAGCTGGAGCCCTGTGA 60.843 57.895 0.00 0.00 43.38 3.58
2232 2419 1.673665 GTCAAGCTGGAGCCCTGTG 60.674 63.158 0.00 0.00 43.38 3.66
2233 2420 1.422161 AAGTCAAGCTGGAGCCCTGT 61.422 55.000 0.00 0.00 43.38 4.00
2234 2421 0.959372 CAAGTCAAGCTGGAGCCCTG 60.959 60.000 0.00 0.00 43.38 4.45
2235 2422 1.377994 CAAGTCAAGCTGGAGCCCT 59.622 57.895 0.00 0.00 43.38 5.19
2236 2423 0.957888 GACAAGTCAAGCTGGAGCCC 60.958 60.000 0.00 0.00 43.38 5.19
2237 2424 0.250467 TGACAAGTCAAGCTGGAGCC 60.250 55.000 0.00 0.00 36.81 4.70
2238 2425 1.736681 GATGACAAGTCAAGCTGGAGC 59.263 52.381 7.02 0.00 43.58 4.70
2239 2426 3.049708 TGATGACAAGTCAAGCTGGAG 57.950 47.619 7.02 0.00 43.58 3.86
2240 2427 3.340928 CATGATGACAAGTCAAGCTGGA 58.659 45.455 7.02 0.00 43.58 3.86
2241 2428 2.422479 CCATGATGACAAGTCAAGCTGG 59.578 50.000 7.02 9.75 43.58 4.85
2242 2429 2.159421 GCCATGATGACAAGTCAAGCTG 60.159 50.000 7.02 4.95 43.58 4.24
2243 2430 2.089980 GCCATGATGACAAGTCAAGCT 58.910 47.619 7.02 0.00 43.58 3.74
2244 2431 2.089980 AGCCATGATGACAAGTCAAGC 58.910 47.619 7.02 5.86 43.58 4.01
2245 2432 4.093998 GTGTAGCCATGATGACAAGTCAAG 59.906 45.833 7.02 0.00 43.58 3.02
2246 2433 4.002982 GTGTAGCCATGATGACAAGTCAA 58.997 43.478 7.02 0.00 43.58 3.18
2247 2434 3.261643 AGTGTAGCCATGATGACAAGTCA 59.738 43.478 5.24 5.24 44.59 3.41
2248 2435 3.866651 AGTGTAGCCATGATGACAAGTC 58.133 45.455 0.00 0.00 0.00 3.01
2249 2436 3.988976 AGTGTAGCCATGATGACAAGT 57.011 42.857 0.00 0.00 0.00 3.16
2250 2437 6.932356 AAATAGTGTAGCCATGATGACAAG 57.068 37.500 0.00 0.00 0.00 3.16
2251 2438 6.883756 TGAAAATAGTGTAGCCATGATGACAA 59.116 34.615 0.00 0.00 0.00 3.18
2252 2439 6.413892 TGAAAATAGTGTAGCCATGATGACA 58.586 36.000 0.00 0.00 0.00 3.58
2253 2440 6.925610 TGAAAATAGTGTAGCCATGATGAC 57.074 37.500 0.00 0.00 0.00 3.06
2254 2441 7.281841 TGATGAAAATAGTGTAGCCATGATGA 58.718 34.615 0.00 0.00 0.00 2.92
2255 2442 7.500720 TGATGAAAATAGTGTAGCCATGATG 57.499 36.000 0.00 0.00 0.00 3.07
2256 2443 8.523915 TTTGATGAAAATAGTGTAGCCATGAT 57.476 30.769 0.00 0.00 0.00 2.45
2257 2444 7.415541 GCTTTGATGAAAATAGTGTAGCCATGA 60.416 37.037 0.00 0.00 0.00 3.07
2258 2445 6.694411 GCTTTGATGAAAATAGTGTAGCCATG 59.306 38.462 0.00 0.00 0.00 3.66
2259 2446 6.377996 TGCTTTGATGAAAATAGTGTAGCCAT 59.622 34.615 0.00 0.00 0.00 4.40
2260 2447 5.709631 TGCTTTGATGAAAATAGTGTAGCCA 59.290 36.000 0.00 0.00 0.00 4.75
2261 2448 6.194796 TGCTTTGATGAAAATAGTGTAGCC 57.805 37.500 0.00 0.00 0.00 3.93
2262 2449 7.308435 AGTTGCTTTGATGAAAATAGTGTAGC 58.692 34.615 0.00 0.00 0.00 3.58
2263 2450 8.725148 AGAGTTGCTTTGATGAAAATAGTGTAG 58.275 33.333 0.00 0.00 0.00 2.74
2264 2451 8.621532 AGAGTTGCTTTGATGAAAATAGTGTA 57.378 30.769 0.00 0.00 0.00 2.90
2265 2452 7.516198 AGAGTTGCTTTGATGAAAATAGTGT 57.484 32.000 0.00 0.00 0.00 3.55
2266 2453 8.295288 AGAAGAGTTGCTTTGATGAAAATAGTG 58.705 33.333 0.00 0.00 36.83 2.74
2267 2454 8.401490 AGAAGAGTTGCTTTGATGAAAATAGT 57.599 30.769 0.00 0.00 36.83 2.12
2270 2457 9.688592 CTTAAGAAGAGTTGCTTTGATGAAAAT 57.311 29.630 0.00 0.00 36.83 1.82
2271 2458 8.902806 TCTTAAGAAGAGTTGCTTTGATGAAAA 58.097 29.630 1.68 0.00 36.83 2.29
2272 2459 8.450578 TCTTAAGAAGAGTTGCTTTGATGAAA 57.549 30.769 1.68 0.00 36.83 2.69
2273 2460 8.450578 TTCTTAAGAAGAGTTGCTTTGATGAA 57.549 30.769 13.99 0.00 39.03 2.57
2307 2494 3.264357 AGGAACTTCGTTGTGGGGACC 62.264 57.143 0.00 0.00 46.63 4.46
2308 2495 0.108019 AGGAACTTCGTTGTGGGGAC 59.892 55.000 0.00 0.00 27.25 4.46
2309 2496 0.395312 GAGGAACTTCGTTGTGGGGA 59.605 55.000 0.00 0.00 41.55 4.81
2310 2497 0.605589 GGAGGAACTTCGTTGTGGGG 60.606 60.000 0.00 0.00 41.55 4.96
2311 2498 0.107831 TGGAGGAACTTCGTTGTGGG 59.892 55.000 0.00 0.00 41.55 4.61
2312 2499 2.185004 ATGGAGGAACTTCGTTGTGG 57.815 50.000 0.00 0.00 41.55 4.17
2313 2500 4.082190 TCTCTATGGAGGAACTTCGTTGTG 60.082 45.833 6.21 0.00 41.55 3.33
2314 2501 4.087182 TCTCTATGGAGGAACTTCGTTGT 58.913 43.478 6.21 0.00 41.55 3.32
2315 2502 4.720649 TCTCTATGGAGGAACTTCGTTG 57.279 45.455 6.21 0.00 41.55 4.10
2316 2503 4.081586 GGTTCTCTATGGAGGAACTTCGTT 60.082 45.833 6.21 0.00 41.55 3.85
2317 2504 3.447944 GGTTCTCTATGGAGGAACTTCGT 59.552 47.826 6.21 0.00 41.55 3.85
2318 2505 3.181474 GGGTTCTCTATGGAGGAACTTCG 60.181 52.174 6.21 0.00 41.55 3.79
2319 2506 3.181474 CGGGTTCTCTATGGAGGAACTTC 60.181 52.174 6.21 5.99 41.55 3.01
2320 2507 2.766828 CGGGTTCTCTATGGAGGAACTT 59.233 50.000 6.21 0.00 41.55 2.66
2322 2509 1.413077 CCGGGTTCTCTATGGAGGAAC 59.587 57.143 6.21 0.00 39.86 3.62
2323 2510 1.007963 ACCGGGTTCTCTATGGAGGAA 59.992 52.381 6.32 0.00 39.86 3.36
2324 2511 0.635009 ACCGGGTTCTCTATGGAGGA 59.365 55.000 6.32 0.00 39.86 3.71
2325 2512 1.497161 AACCGGGTTCTCTATGGAGG 58.503 55.000 6.59 0.00 39.86 4.30
2326 2513 2.500098 TCAAACCGGGTTCTCTATGGAG 59.500 50.000 13.78 0.00 40.73 3.86
2327 2514 2.542550 TCAAACCGGGTTCTCTATGGA 58.457 47.619 13.78 0.00 0.00 3.41
2328 2515 3.560636 ATCAAACCGGGTTCTCTATGG 57.439 47.619 13.78 0.00 0.00 2.74
2329 2516 5.869888 GCTATATCAAACCGGGTTCTCTATG 59.130 44.000 13.78 7.53 0.00 2.23
2330 2517 5.780793 AGCTATATCAAACCGGGTTCTCTAT 59.219 40.000 13.78 11.88 0.00 1.98
2331 2518 5.145564 AGCTATATCAAACCGGGTTCTCTA 58.854 41.667 13.78 5.41 0.00 2.43
2332 2519 3.967987 AGCTATATCAAACCGGGTTCTCT 59.032 43.478 13.78 3.25 0.00 3.10
2333 2520 4.338379 AGCTATATCAAACCGGGTTCTC 57.662 45.455 13.78 0.00 0.00 2.87
2334 2521 4.900054 AGTAGCTATATCAAACCGGGTTCT 59.100 41.667 13.78 5.84 0.00 3.01
2335 2522 5.211174 AGTAGCTATATCAAACCGGGTTC 57.789 43.478 13.78 0.00 0.00 3.62
2336 2523 6.073314 TCTAGTAGCTATATCAAACCGGGTT 58.927 40.000 6.59 6.59 0.00 4.11
2337 2524 5.638133 TCTAGTAGCTATATCAAACCGGGT 58.362 41.667 6.32 0.00 0.00 5.28
2338 2525 5.944599 TCTCTAGTAGCTATATCAAACCGGG 59.055 44.000 6.32 0.00 0.00 5.73
2339 2526 7.306953 GTTCTCTAGTAGCTATATCAAACCGG 58.693 42.308 0.00 0.00 0.00 5.28
2340 2527 7.175293 AGGTTCTCTAGTAGCTATATCAAACCG 59.825 40.741 15.32 0.00 37.07 4.44
2341 2528 8.301002 CAGGTTCTCTAGTAGCTATATCAAACC 58.699 40.741 14.26 14.26 33.20 3.27
2342 2529 8.301002 CCAGGTTCTCTAGTAGCTATATCAAAC 58.699 40.741 0.00 0.00 0.00 2.93
2343 2530 8.225416 TCCAGGTTCTCTAGTAGCTATATCAAA 58.775 37.037 0.00 0.00 0.00 2.69
2344 2531 7.756614 TCCAGGTTCTCTAGTAGCTATATCAA 58.243 38.462 0.00 0.00 0.00 2.57
2345 2532 7.331089 TCCAGGTTCTCTAGTAGCTATATCA 57.669 40.000 0.00 0.00 0.00 2.15
2346 2533 6.826741 CCTCCAGGTTCTCTAGTAGCTATATC 59.173 46.154 0.00 0.00 0.00 1.63
2347 2534 6.727394 CCTCCAGGTTCTCTAGTAGCTATAT 58.273 44.000 0.00 0.00 0.00 0.86
2348 2535 5.515184 GCCTCCAGGTTCTCTAGTAGCTATA 60.515 48.000 0.00 0.00 37.57 1.31
2349 2536 4.751652 GCCTCCAGGTTCTCTAGTAGCTAT 60.752 50.000 0.00 0.00 37.57 2.97
2350 2537 3.435313 GCCTCCAGGTTCTCTAGTAGCTA 60.435 52.174 0.00 0.00 37.57 3.32
2351 2538 2.688515 GCCTCCAGGTTCTCTAGTAGCT 60.689 54.545 0.00 0.00 37.57 3.32
2352 2539 1.684450 GCCTCCAGGTTCTCTAGTAGC 59.316 57.143 0.00 0.00 37.57 3.58
2353 2540 2.691011 GTGCCTCCAGGTTCTCTAGTAG 59.309 54.545 0.00 0.00 37.57 2.57
2354 2541 2.312140 AGTGCCTCCAGGTTCTCTAGTA 59.688 50.000 0.00 0.00 37.57 1.82
2355 2542 1.077993 AGTGCCTCCAGGTTCTCTAGT 59.922 52.381 0.00 0.00 37.57 2.57
2356 2543 1.754226 GAGTGCCTCCAGGTTCTCTAG 59.246 57.143 10.11 0.00 35.68 2.43
2357 2544 1.359474 AGAGTGCCTCCAGGTTCTCTA 59.641 52.381 15.33 0.00 41.55 2.43
2358 2545 0.116143 AGAGTGCCTCCAGGTTCTCT 59.884 55.000 12.71 12.71 40.03 3.10
2359 2546 0.534873 GAGAGTGCCTCCAGGTTCTC 59.465 60.000 9.63 9.63 37.33 2.87
2360 2547 0.116143 AGAGAGTGCCTCCAGGTTCT 59.884 55.000 0.00 0.00 42.97 3.01
2361 2548 0.248843 CAGAGAGTGCCTCCAGGTTC 59.751 60.000 0.00 0.00 42.97 3.62
2362 2549 0.178921 TCAGAGAGTGCCTCCAGGTT 60.179 55.000 0.00 0.00 42.97 3.50
2363 2550 0.178921 TTCAGAGAGTGCCTCCAGGT 60.179 55.000 0.00 0.00 42.97 4.00
2364 2551 0.979665 TTTCAGAGAGTGCCTCCAGG 59.020 55.000 0.00 0.00 42.97 4.45
2365 2552 2.847327 TTTTCAGAGAGTGCCTCCAG 57.153 50.000 0.00 0.00 42.97 3.86
2366 2553 4.287067 ACTTATTTTCAGAGAGTGCCTCCA 59.713 41.667 0.00 0.00 42.97 3.86
2367 2554 4.837972 ACTTATTTTCAGAGAGTGCCTCC 58.162 43.478 0.00 0.00 42.97 4.30
2368 2555 7.984617 AGAATACTTATTTTCAGAGAGTGCCTC 59.015 37.037 0.00 0.00 42.28 4.70
2369 2556 7.856415 AGAATACTTATTTTCAGAGAGTGCCT 58.144 34.615 0.00 0.00 0.00 4.75
2370 2557 8.499403 AAGAATACTTATTTTCAGAGAGTGCC 57.501 34.615 0.00 0.00 34.28 5.01
2371 2558 9.155975 TGAAGAATACTTATTTTCAGAGAGTGC 57.844 33.333 0.00 0.00 36.39 4.40
2391 2578 9.889128 TTGTCTATTCACATGTCATATGAAGAA 57.111 29.630 11.91 7.48 35.89 2.52
2392 2579 9.317936 GTTGTCTATTCACATGTCATATGAAGA 57.682 33.333 11.91 6.81 35.89 2.87
2393 2580 9.322773 AGTTGTCTATTCACATGTCATATGAAG 57.677 33.333 11.91 3.34 35.89 3.02
2394 2581 9.317936 GAGTTGTCTATTCACATGTCATATGAA 57.682 33.333 8.91 8.91 36.81 2.57
2395 2582 7.928167 GGAGTTGTCTATTCACATGTCATATGA 59.072 37.037 0.00 0.00 0.00 2.15
2396 2583 7.930325 AGGAGTTGTCTATTCACATGTCATATG 59.070 37.037 0.00 0.00 0.00 1.78
2397 2584 7.930325 CAGGAGTTGTCTATTCACATGTCATAT 59.070 37.037 0.00 0.00 0.00 1.78
2398 2585 7.267857 CAGGAGTTGTCTATTCACATGTCATA 58.732 38.462 0.00 0.00 0.00 2.15
2399 2586 6.111382 CAGGAGTTGTCTATTCACATGTCAT 58.889 40.000 0.00 0.00 0.00 3.06
2400 2587 5.482006 CAGGAGTTGTCTATTCACATGTCA 58.518 41.667 0.00 0.00 0.00 3.58
2401 2588 4.872691 CCAGGAGTTGTCTATTCACATGTC 59.127 45.833 0.00 0.00 0.00 3.06
2402 2589 4.287067 ACCAGGAGTTGTCTATTCACATGT 59.713 41.667 0.00 0.00 0.00 3.21
2403 2590 4.836825 ACCAGGAGTTGTCTATTCACATG 58.163 43.478 0.00 0.00 0.00 3.21
2404 2591 6.586344 CATACCAGGAGTTGTCTATTCACAT 58.414 40.000 0.00 0.00 0.00 3.21
2405 2592 5.626809 GCATACCAGGAGTTGTCTATTCACA 60.627 44.000 0.00 0.00 0.00 3.58
2406 2593 4.811557 GCATACCAGGAGTTGTCTATTCAC 59.188 45.833 0.00 0.00 0.00 3.18
2407 2594 4.716784 AGCATACCAGGAGTTGTCTATTCA 59.283 41.667 0.00 0.00 0.00 2.57
2408 2595 5.163405 TGAGCATACCAGGAGTTGTCTATTC 60.163 44.000 0.00 0.00 0.00 1.75
2409 2596 4.716784 TGAGCATACCAGGAGTTGTCTATT 59.283 41.667 0.00 0.00 0.00 1.73
2410 2597 4.290093 TGAGCATACCAGGAGTTGTCTAT 58.710 43.478 0.00 0.00 0.00 1.98
2411 2598 3.708451 TGAGCATACCAGGAGTTGTCTA 58.292 45.455 0.00 0.00 0.00 2.59
2412 2599 2.540383 TGAGCATACCAGGAGTTGTCT 58.460 47.619 0.00 0.00 0.00 3.41
2413 2600 3.550437 ATGAGCATACCAGGAGTTGTC 57.450 47.619 0.00 0.00 0.00 3.18
2414 2601 4.263462 TGAAATGAGCATACCAGGAGTTGT 60.263 41.667 0.00 0.00 0.00 3.32
2415 2602 4.264253 TGAAATGAGCATACCAGGAGTTG 58.736 43.478 0.00 0.00 0.00 3.16
2416 2603 4.574674 TGAAATGAGCATACCAGGAGTT 57.425 40.909 0.00 0.00 0.00 3.01
2417 2604 4.785346 ATGAAATGAGCATACCAGGAGT 57.215 40.909 0.00 0.00 0.00 3.85
2418 2605 4.518211 GGAATGAAATGAGCATACCAGGAG 59.482 45.833 0.00 0.00 0.00 3.69
2419 2606 4.166725 AGGAATGAAATGAGCATACCAGGA 59.833 41.667 0.00 0.00 0.00 3.86
2420 2607 4.467769 AGGAATGAAATGAGCATACCAGG 58.532 43.478 0.00 0.00 0.00 4.45
2421 2608 5.374921 AGAGGAATGAAATGAGCATACCAG 58.625 41.667 0.00 0.00 0.00 4.00
2422 2609 5.378230 AGAGGAATGAAATGAGCATACCA 57.622 39.130 0.00 0.00 0.00 3.25
2423 2610 5.009410 CCAAGAGGAATGAAATGAGCATACC 59.991 44.000 0.00 0.00 36.89 2.73
2424 2611 5.824624 TCCAAGAGGAATGAAATGAGCATAC 59.175 40.000 0.00 0.00 42.23 2.39
2425 2612 6.005066 TCCAAGAGGAATGAAATGAGCATA 57.995 37.500 0.00 0.00 42.23 3.14
2426 2613 4.863548 TCCAAGAGGAATGAAATGAGCAT 58.136 39.130 0.00 0.00 42.23 3.79
2427 2614 4.305539 TCCAAGAGGAATGAAATGAGCA 57.694 40.909 0.00 0.00 42.23 4.26
2439 2626 4.017037 AGTGAAGATCTAGGTCCAAGAGGA 60.017 45.833 0.00 0.00 43.21 3.71
2440 2627 4.285863 AGTGAAGATCTAGGTCCAAGAGG 58.714 47.826 0.00 0.00 0.00 3.69
2441 2628 5.930837 AAGTGAAGATCTAGGTCCAAGAG 57.069 43.478 0.00 0.00 0.00 2.85
2442 2629 5.780282 TGAAAGTGAAGATCTAGGTCCAAGA 59.220 40.000 0.00 0.00 0.00 3.02
2443 2630 6.042638 TGAAAGTGAAGATCTAGGTCCAAG 57.957 41.667 0.00 0.00 0.00 3.61
2444 2631 6.433847 TTGAAAGTGAAGATCTAGGTCCAA 57.566 37.500 0.00 0.00 0.00 3.53
2445 2632 6.433847 TTTGAAAGTGAAGATCTAGGTCCA 57.566 37.500 0.00 0.00 0.00 4.02
2446 2633 6.937465 ACTTTTGAAAGTGAAGATCTAGGTCC 59.063 38.462 8.24 0.00 46.80 4.46
2447 2634 7.971183 ACTTTTGAAAGTGAAGATCTAGGTC 57.029 36.000 8.24 0.00 46.80 3.85
2461 2648 9.057089 AGTCCTACAATTCTACACTTTTGAAAG 57.943 33.333 2.06 2.06 41.73 2.62
2462 2649 8.974060 AGTCCTACAATTCTACACTTTTGAAA 57.026 30.769 0.00 0.00 0.00 2.69
2463 2650 8.974060 AAGTCCTACAATTCTACACTTTTGAA 57.026 30.769 0.00 0.00 0.00 2.69
2464 2651 8.208224 TGAAGTCCTACAATTCTACACTTTTGA 58.792 33.333 0.00 0.00 0.00 2.69
2465 2652 8.378172 TGAAGTCCTACAATTCTACACTTTTG 57.622 34.615 0.00 0.00 0.00 2.44
2466 2653 8.837389 GTTGAAGTCCTACAATTCTACACTTTT 58.163 33.333 0.00 0.00 31.71 2.27
2467 2654 7.444487 GGTTGAAGTCCTACAATTCTACACTTT 59.556 37.037 0.00 0.00 32.60 2.66
2468 2655 6.935208 GGTTGAAGTCCTACAATTCTACACTT 59.065 38.462 0.00 0.00 32.60 3.16
2469 2656 6.465084 GGTTGAAGTCCTACAATTCTACACT 58.535 40.000 0.00 0.00 32.60 3.55
2470 2657 5.347907 CGGTTGAAGTCCTACAATTCTACAC 59.652 44.000 0.00 0.00 32.60 2.90
2471 2658 5.244402 TCGGTTGAAGTCCTACAATTCTACA 59.756 40.000 0.00 0.00 32.60 2.74
2472 2659 5.717119 TCGGTTGAAGTCCTACAATTCTAC 58.283 41.667 0.00 0.00 0.00 2.59
2473 2660 5.105473 CCTCGGTTGAAGTCCTACAATTCTA 60.105 44.000 0.00 0.00 0.00 2.10
2474 2661 4.322801 CCTCGGTTGAAGTCCTACAATTCT 60.323 45.833 0.00 0.00 0.00 2.40
2475 2662 3.933332 CCTCGGTTGAAGTCCTACAATTC 59.067 47.826 0.00 0.00 0.00 2.17
2476 2663 3.868754 GCCTCGGTTGAAGTCCTACAATT 60.869 47.826 0.00 0.00 0.00 2.32
2477 2664 2.354805 GCCTCGGTTGAAGTCCTACAAT 60.355 50.000 0.00 0.00 0.00 2.71
2483 2670 0.321653 ATGTGCCTCGGTTGAAGTCC 60.322 55.000 0.00 0.00 0.00 3.85
2546 2733 2.251872 AGGGGCCTAGGTTGGTTAGATA 59.748 50.000 11.31 0.00 0.00 1.98
2567 2754 1.013596 CAACTCGTCAAAGCCACACA 58.986 50.000 0.00 0.00 0.00 3.72
2571 2758 0.592637 CATGCAACTCGTCAAAGCCA 59.407 50.000 0.00 0.00 0.00 4.75
2594 2782 2.480555 CGACAATCAACTGGGCGC 59.519 61.111 0.00 0.00 0.00 6.53
2615 2803 5.011431 CGGGGAAAGTAATAGGTAGGTAAGG 59.989 48.000 0.00 0.00 0.00 2.69
2618 2806 3.897505 GCGGGGAAAGTAATAGGTAGGTA 59.102 47.826 0.00 0.00 0.00 3.08
2666 2857 2.065512 CATCGTTGTCGTCACCATTGA 58.934 47.619 0.00 0.00 38.33 2.57
2668 2859 1.438651 CCATCGTTGTCGTCACCATT 58.561 50.000 0.00 0.00 38.33 3.16
2677 2868 0.526211 GAAAAGGCCCCATCGTTGTC 59.474 55.000 0.00 0.00 0.00 3.18
2682 2873 1.376609 CCGAAGAAAAGGCCCCATCG 61.377 60.000 0.00 1.24 0.00 3.84
2725 2916 2.017049 GTTGCATCGCTTAACCTCCAT 58.983 47.619 0.00 0.00 0.00 3.41
2821 3012 3.207777 AGGCTACTAATCCAAGGAGAGGA 59.792 47.826 0.00 0.00 39.97 3.71
2826 3017 3.454812 GTCCAAGGCTACTAATCCAAGGA 59.545 47.826 0.00 0.00 0.00 3.36
2846 3037 3.002965 CGTTTTTCTACTTGTGGGGTGTC 59.997 47.826 0.00 0.00 0.00 3.67
2856 3047 5.995897 ACTGCTAATGTCCGTTTTTCTACTT 59.004 36.000 0.00 0.00 0.00 2.24
2870 3061 2.154462 GTCTTGGCACACTGCTAATGT 58.846 47.619 0.00 0.00 42.85 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.