>input_sequence_66103
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--------------------------------AAACCAACCGCCGAGAAAACAAACGAGCAAACCAACATATCTCGTCGA
CCACGTTCGCCCCCGATCCGATCAG----CGAGCAACCATGGTCAGCATGAAGCTTCCGCCGCCGACCACGCGCTCGACG
ATCACCGCCACGACGAGCGCCGGCACCCACGAGCTCAAGGTGGAGGGCTACTCCGTGACCAAGCTGCTCGTCGCCGGCGA
GCACATCGAGTCCAGCAAGTTCAGGGCGGCGGGCCACGATTTTCAGATCTGCTACTACCC------GCACAGGTACCAGA
AGAAGGACT------------------------------------------------------GCAACGCCAGCATCTCC
TTCTTCCTCAAGATGGCCGAGGCGGCCGCCTCGA---ACATCCGCGTCGAGTTCATGTTCAGCCTGGTCTCTCGCCACGG
CGGTGAGCCTGCA------------------------CGTTTTGCTGGCGAGCGCCACGTGGTGACGTTCCCTCACAAGC
ACGACGGCGTCGAGTACTGGGGCCTGGAGATCTCGAAGAAGGAGCTTGAGGGGTCGCCGGAGTACCTGTGGGACGA-CTC
CTTTGTCTTGCGGTGTGAGATCACCGTCCTCGACAAGCCGGTCGTGAAAAGCCATGACGGCCTCGCCGTCTGCCGCTGCA
AGGATGACTTGTGCAAGCGTCGTCACCTGAGAAACACGGCGGATCGCGCATCATGGGTCAAGGACGTAGTCCTCAAGCAC
TTCCTTAAGTGTGTCGGCATATGAAATCATGT----------------ATATTATGCAAACCACAGTTTCGGTTTTATAA
TTGTAACGATTTTGCGTCACTATATAGTTCAGGTGCGTTAGTTTCAATTGTCGCTGAGAGTGTTATGTAGTATTGAT--G
TGTAGGCCAGGTTCTTGGCTGGTCAACTAATCTAGGTACATATACCATTTCTTGCAATAAATGTTAT-AGATTTGT----
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>chr7B_1_TraesCS7B01G328200
ATGGACGAAAAATGCTTCAACGAGGCACTAAAAAAGGAAAAAAGCTGGAAACATTGACAGAAAAAGGTTCAACCGTAGAT
GCAAAA-GCTTCAACCAGGATACTGTGCAACG-AAAAAAGCTTCAACCATTGACAGAAAAAGCTTCAACGGTTGATGAAA
AAGTTTCAACCAGGACATTGTGCAATAGAAAAAGCAACAACCGTTGACAGAAAAA--GCTTCAATTGTATATGAAAAAGG
CTTCAA-CCGGCAATAGAAAAAAGCTTCCTGGAGGCTCACGCTTCCATGAAAGCTGCAATGGCCCAGCGAACTGCTACAT
GAGTGCTTTTTTAGTTGTAAATTTATACTGGCAAATATGTAGA-AAACATATAACAATTTTGCTTCCATAGTTTTTTTGT
GTTTTGTTGTGAGC-TTTTTTT-GCACAATG-----TATGTT---CTTTTTTCATCATAAAAGTACAGAAATTA-TGCTA
CAAA-CATATG---ATTTTTTTTATT---TGTGTTTTTTGA-TTTTGTTGTGAACTTTTTGCTGCAATGCTACATACA-A
ATACAGTTTAACAACAAGCGCAGATCTTCTATGTACA-TTTTTGATTGAAACTATTATGTGCACATAGCAGAGAGAAGTC
ACAATCATCATTTGGATGGGCTCCACCCACGTGAAAGCATGCAACATCCACGGCGCATGGGACAAGCGACTTCCGGGCGA
TGCAGGTGGGCAACCAGCGTACAAAA-AA-------G--------AAGGAACGACATGC-TAGACGATCGGACGGATTAA
ATTAATCAAATCGGACGACCTACGCGCGACCGGACGAAATTTTAGGCCGGTGCGCCGGCGCACATCAGTCCCCTTAGCAA
AAGGGATACAAGATCGGAGATAGAAACAGACCCGG------ATACGCATCTCGTTCCAAGTAACAATCGGAGACAGAGTG
GCGC------------CGTAGGCA---GTACTAGCAGTATATATAACGGTGCAGCACGTACGCCTTGGATATATAACGGT
GCGGCACGTACGCCTTGGACGT-------TCCAAACCAACCGCCGAGAAAACAAACGAGCAAACCAACATATCTCGTCGA
CCACGTTCGCCCCCGATCCGATCAG----CGAGCAACCATGGTCAGCATGAAGCTTCCGCCGCCGACCACGCGCTCGACG
ATCACCGCCACGACGAGCGCCGGCACCCACGAGCTCAAGGTGGAGGGCTACTCCGTGACCAAGCTGCTCGTCGCCGGCGA
GCACATCGAGTCCAGCAAGTTCAGGGCGGCGGGCCACGATTTTCAGATCTGCTACTACCC------GCACAGGTACCAGA
AGAAGGACT------------------------------------------------------GCAACGCCAGCATCTCC
TTCTTCCTCAAGATGGCCGAGGCGGCCGCCTCGA---ACATCCGCGTCGAGTTCATGTTCAGCCTGGTCTCTCGCCACGG
CGGTGAGCCTGCA------------------------CGTTTTGCTGGCGAGCGCCACGTGGTGACGTTCCCTCACAAGC
ACGACGGCGTCGAGTACTGGGGCCTGGAGATCTCGAAGAAGGAGCTTGAGGGGTCGCCGGAGTACCTGTGGGACGA-CTC
CTTTGTCTTGCGGTGTGAGATCACCGTCCTCGACAAGCCGGTCGTGAAAAGCCATGACGGCCTCGCCGTCTGCCGCTGCA
AGGATGACTTGTGCAAGCGTCGTCACCTGAGAAACACGGCGGATCGCGCATCATGGGTCAAGGACGTAGTCCTCAAGCAC
TTCCTTAAGTGTGTCGGCATATGAAATCATGT----------------ATATTATGCAAACCACAGTTTCGGTTTTATAA
TTGTAACGATTTTGCGTCACTATATAGTTCAGGTGCGTTAGTTTCAATTGTCGCTGAGAGTGTTATGTAGTATTGAT--G
TGTAGGCCAGGTTCTTGGCTGGTCAACTAATCTAGGTACATATACCATTTCTTGCAATAAATGTTAT-AGATTTGTAATG
AATCTGCAATTTTATTTTATTTTAATAAAAGAAA-CCCAAAGAGTATCTTAGTATATGATTAATAC--AGGAAAATCACA
ATGGGCAAACAATTGGACACAGAACGACTAGTAAAAAGATAAAATAACGCTGAAAATCGTACTATCCTTCATAGTACATG
ATCAAATGTCTACGGGTGTCATTAATATCATAGGGTACGAACTTCTAAGGTCATGGCGTAGGGTATTGGATAGGCTGGTC
CGCTGGTCGAAGTCATTGCAGGGTGTACTACGGACAGCTATTGTTCCAGGGCTTTTCCTTTCTCTTGTCATCACGCCAAC
ATACACAAGGCTTGCCTTCACAGGGCTCCAGCTTGACTTGTCATCATGGCTACACTATTTTCATCAAAGCAACTCTTCTT
AAGAAGACCCCTTGGTCCCCACAACGAAGTTCCTCCATAGAGAACCCGGTTTGATATAGCTACTAGAGAACCTGGAGGCA
CTCTCTGAAAATAAGTATTCTTCATATGACATGTGAATAGACAACTCCTGGTATGCTCATTTCATTCCTCTTGGACCTAG
ATCTTCACTTTCAAAAGTGTAGAATTGTAGGACTTCAACCGAGGCACATGTAGATATAGGGAACTACAAACCGGCTGGGA
TCGCAATTTACGTATCTAACCAACCTAGGCCCCTGTGTGGCTTTGACGAGTTGCATGG-GGGCGCCCAGTTGATTGTCGG
GGCCTTACCTACCTA---TTACTTTCCCCGCACTGCCGTCATAGGCGGATGTCGGATCAATGGTGACGACAACGATGGGG
CCTTTTCTTCGGTGCATAGGCGCGAGATGCGTGGCATGGAGGTTAAGCGATGCAACTTCACATTTTGTGAGTAATAGCTA
GGTTGAGCAGGGTTGGCGCGGTGGATGGGTGCACAATGGCGCAGCAAGAAGTCCTCTCCTTGGATTAGTAGCCTTGGACA
CCCCACAAGTAGAAAAACGGACATTAGCAGTGTGCCAAGACAG-
>chr7A_1
ATGGATAAAAAATGCTTCAACGAGACACTGAAAAAAGAAAAATGCTGGAAACGTTGACAGAAAAAGGTTCAACCGTAGAT
GCAAAA-GCTTCAACCAGGATACTGTGCAACG-AAAAAAGCTTCAACCGTTGACAGAAAAAGCTTCAACGGTAGATGCAA
AAGATTCAACCAGGACACTGTGCAATGGAAAAAGCTACAACCGTTGACAAAAAAA--GCTTCAATTATATACGAAAAAGG
CTTCAA-CCGGCGATAGAAAAAAGCTTCCTGGAGGCTCGCGCTTCCATGAAACCTGCAATGGCC-AGCGAACTGCTACAT
GAGTGCTTTTCTAGTTGTAAATTTATACTGGAAAATATGTAGA-AAAAATATAACAATTTTGCTTCCATAGTTTTTTTGT
TTTTTGTTGTGAGC-TTTTTTT-GCACAATGCTACATATGTT---CTTTTTTCGTTGTAAAAGTACAGAAATTA-TGCTA
CAAAACATATG---A-TTTTTTTATT---TGTGTTTTT-GATTTTTGTTGTGAA-TTTTTGCTGCAATGCTACATACA-A
ATACAGTTTAACAACAAGTGCAGATTTTCTATGTACA-TTTTTGATTGAAACTATTGTGTGCACATAGCAGAGAGAAGTC
ACAATCATTATTTGGATGGGCTCCACCCACGTGACTGCATGCAACATCCACGGCGCATGGGACAAGCGACTTCCGGGC-A
TGCAGGT-GGCCACCAGCGTACTCCATGGTTGAAGCA--------AAGGAACGACGTGC-CAGACGATCGGACGGATTAA
ACTAATCGAATCGGACGACCTACGCGCGACCGGCCGAAACTTTAGGCCGGTGCGCCGGCGCCCATCAGTCCCC-------
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>chr5A_1
ATGGACGAAAAATGCTTCAACGAGGCACTGAAAAAGGAAAAAAGCTAGAAACATTGACAGAAAAAGGTTCAACCGTAGAT
GCAAAA-GCTTCAACCAGGATACTGTGCAACG-AAAAAAGCTTCAACCGTTGACAGAAAAAGCTTCAATGGTTGATGCAA
AAGATTCAACCAGGACACTGTGCAATGGAAAAAGCTACAACCATTGACAAAAAAA--GCTTTAATTGTATATGAAAAAGG
CTTCAA-CCGGCAATAGAAAT-AGCTTCGTGGAGGCTCACGCTTCCATGAAAGCTGCAATGGCCCAGCAAACTGCTACAT
GAGTGCTTTTTTAGTTGTAAATTTATACCGGCAAATATGTAGA-AAACATATAACAATTTTGCTTCCATAGTTTTTTTGT
TTTTTGTTGTGAGC-TTTTTTT-GCACAATG-----TATGTT---CTTTTTTCGTCATAAAAGTACAGAAATTA-TGCTA
CAAA-CATATG---ATTTTTTTTATT---TGTGTTTTTTTATTTTTGTTGTGAACTTTTTGCTGCAATGCTACATACA-A
ATACAGTTTAACAACAAGCGCAGATCTTCTATGTACATTTTTTGATTGAAACTATTGTGTGCACATAGCAGAGAGAAGTC
ACAATCATCATTTGGATGGGCTCCACCCACGTGACAGCATGCAACATCCACGGCGCATGGGACAAGCGACTTCCAGGCGA
TGCAGATGGGCAACCAGCGTACAAAA-AAAA-----A--------AAGGAACGACGTGC-TAAACGATCGGACGGATTAA
ATTAATCAAATCGGACGACCTACGCGCGACCGGCCGAAATTTTAGGCCGGTGCGCCGGCGCACATCAGTCCCCTTA----
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>chr1D_1
ATGGATAAAAAATGCTTCAACGAGGCACTGAAAAAAGAAAAATGCTGGAAACGTTGACAGAAAAAGGTTCAACCGTAGAT
GCAAAA-GCTTCAACCAGGATACTGTGCAACG-AAAAAAGCTTCAACCGTTGACAGAAAAAGCTTCAACGGTAGATGCAA
AAGATTCAACCAGGACACTGTGCAATGGAAAAAGCTATAACCGTTGACAAAAAAA--GCTTCAATTGTATACGAAAAAGG
CTTCAA-CCGGCGATAGAAAAAATCTTCCTGGAGGCTCGCGCTTCCATGAAAGCTGCAATGGCCCAGCGAACTGCTACAT
GAGTGCTTTTTTAGTTGTAAATTTATACTGGAAAATATGTACA-AAACATATAACAATTTTGCTTCCATA-TTTTTTTGT
TTTTTGTTGTGAAC-TTTTTTT-GCACAATGCTACATATGTT---CTTTTTTCATTGTAAAAGTACAGAAATTA-TGCTA
CAAAACATATG---A-TTTTTTTATT---TGTGTTTTTTGATTTTTGTTGTGAA-TTTTTGCTGCAATGCTACATACA-A
ATACAGTTTAACAACAAGCGCAGATCTTCAATGTACATTTTTTGATTGAAACTATTGTGTGCACATAGCAGAGAGAAGTC
ACAATCATCATTTGGATGGGCTCCACCCACGTGACAGCATGCAACATCCACGGCGCATGGGACAAGCGACTTCCGGGCGA
TGCAGGTGGGCCACTAGCGTACAAAAGAA-------A--------AAAGAACGACGTGC-CAGACGATCGGACGGATTAA
AATAATCGAATCGGACGACCTACGCGCGACCGGCCGAAACTTTAGGCCGGTGCGCCGGCGCCCATCAGTCCCC-------
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>chr3B_10
---------AAATGCTTCAACGAGGCACTGAAAAAGGAAAAAAGCTGGAAACATTGACAGGAAAAGGTTCAACCGTAGAT
GCAAAA-GCTTCAATCAGAATACTGTGCAACG-AAAAAAGCTTCAACCGTTGACAGAAAAAGCTTCAACGGTTGATGCAA
AAGATTCAATCAGGACACTGTGCAATGGAAAAAGCTACAACCTTTGACAAAAAAA--GCTTCAATTGTATATGAAAAAGG
CTTCAA-CCGGCAATAGAAAAAAGCTTCCTGGAGGCTCACGCTTCCATGAAAGTTGCAATGGCCCAGCGAACTGCTACAT
GAGTGCTTTTTTAGTTGTAAATTTATACTGGCAAATTTGTAGA-AAACATATAACAATTTTGCTTCCATAGTTTTTTTGT
TTTTTGGTTTGAGC-TTTTTTTTGCACAATG-----TATGTT---CTTTTTTCGTCATAAAAGTACATAAATTA-TGTTA
CAAA-CATATG---ATTTTTTTTATT---TGTGTTTTTTGATTTTTGTTGTGAACTTTTTGCTGCAATGCTACATACA-A
GTACAGTTTAACAACAAGCGCAGATCTTCTATGTACATTTTT-TATTGAAACTATTGTGTGCACATAGCAGAGAGAAGTC
ACAATCATCATTTGGATGGGCTCCACCCACGTGACAGCATGCATCATCCACGGCGTATGGGATAAGCGACTTCCGGGCGA
TGCAGGTGGGCAACCAGCGTACAAAA-AA-------A--------AAAGAACGACGTGC-TATACGATCGGATGGATTAA
ATTAATCAAATCGGACGACCTACGCGTGACCGGCCGAAATTTTAGGCCGGTGCGCCG-----------------------
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>chr4B_10
---------AAATGCTTCAACGAGACACTGAAAAAGGAAAAATGCTGGAAACGTTGACAGAAAAAGGTTCAACCGTAGAT
GCAAAA-GCTTCAACCAGGATACTGTGCAACGAAAAAAAGCTTCAACCTTTGACAGAAAAAGCTTCAACGGTAGATGCAA
AAGATTCAACCAGGACACTGTGCAATAGAAAAAGCTACAACCGTTGACAAAAAAA--GCTTCAATTATATACCAAAAAGG
CTTCAA-CCGGCGATAGAAAAAAGCTTCCTGGAGGTTCGCGCTTCCATGAAAGCTGCAATGGCC-ACCGAACTGCTACAT
GAGTGCTTTTTTAGTTGTAAATTTATACTGGAAAATATGTAGAAAAAAATATAACAATTTTGCTTCCATAGGTTTTTTGT
TTTTTGTTGTGAGC-TTTGTTT-GCAGAATGCTACATATGTT---CTTTTTTCGTTGTAAAAGTACAGAAATTA-TGCTA
CAAAACATATGG----TTTTTTA--T---TTGTATTTTTGATTTTTGTTGTGAA-TTTTTACTGCAATGCTACATACA-A
ATACAGTTTAACAACAAGTGCAGATTTTCTATGTACA-TTTTTGATTGAAACTATTGTGTGCACATAGCAGAGAGAAGTC
ACAATCATTATTTGGATGGGCTCCACCCACGTGACTGCATGCAACACCCACGGCGCATGAGACAAGCGACTTTCGGGC-A
TGCAGATGGGCCACCAGCGTACTCCATGGTTGAAGCA--------AAGGAACGACGTGC-CAGACGATCGAACGGATTAA
ACTAATCGAATCGGACGACCTACGCGCGACCGGCCGAAACTATAGGCCCGTGCGCCGGCGCCCATCAGTCCCC-------
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--------------------------------------------
>chr5A_44
-------------------------------------------GCTGCAACCGTTGACAGAAAAAGCTTCAACCGTAGAT
GAGAAAAGCATCAACCAGGC-ACCGTGAAAAG-GAAAAAGCTACAACCGTTGACTAAAAAATCTTCAACCGTAGATGCAA
AAGTTTCAACTAGGACATTGTGCAACAAAAAAAGCTGCAACCACTAACAAAGA-A--ACTTTAACTGTAGATGCAAATAG
CTTCAA-CCGGCGATGGAAAAAAGCTTCATGGAGGCTCGGGTTTTCACGAAAGCCACAACAGCCCAATGAACTGCTACAT
GAGTGCTTTTTTAGTTGTAACTATAAACTAAAAAATATGCTAG-AAACATATAACTATTTTGCTTCCATAGTTTTTCCGT
TTTT-GTTGTGAGCT---TTTTTGCACAATG-----CAACATATGTTTTTTTCATTGTAAAGGGAACGAAATTTGTGCTA
CAAA-CATTCAACTATTTTTTTG--T---TTTGATTTTTGATTTTTGTTGTGAA-GTTTTACTGCAATGCTACATACACA
ATACATTTTAATAACAAGTGCAGATTTTCTGTGTACATTTT-CGATTGAAACTATTGAGTGTAGATAGCAGAGCGAAGTC
ACA-TCATCATTTTGATGGGCTTCACCCACCTGACAACATGCAACCTCCACCGCATGG----------------------
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>chr1A_44
-------------------------------------------GCTGCAACCGTTGACAGAAAAAGTTTCAACCGTAGAT
GAAAAAAGCATCAACTAGGC-ACCATGAAAAG-GAAAAAGCTACAACCATTGACTAAACAAGCTTCAACCGTATATGCAA
TAGTTTCAACTATGACACTATGCAACAAAAAAAGCTGTAACCGCTGACAAAAAAA--GCTTCAACTGTAGATGCAAATAG
CTTTAACCCGGCGATGAAAATAAGCTTCATGGAGGCTCGCGTTTTCATGAAAGCCACAACGGCCCAATGACCTGCTACAT
GAGTGCTTTTTTAGTTGTAAACATAAACTAAAAATTATGTCAG-AAACATATAACGATTTTGCTTCCATAGTTTTTCCGT
TTTT-GTTGTGAGCC---TTTTTGCACAATG-----CAACAT---TTTTTTTCATTGTATAAGTATTGAAATTTATTCTA
CAAA-CATTCAACTTTTTTTTTGATT---TTGATTTTTGGTTTTTTGTTGTGAA-GTTTTACTGCAATGCTACATATGCA
ATACACTTTAACAACGAGTGTAGATTTTCT---TACATTTTTCGATTGAAACTATTGAATGTAGATAGCAGAGTGAAGTC
G-AATCATCATTTGGATGGGGTCCACCCACACGACAGCATGCAACCTCCACCGCATG-----------------------
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>chrUn_83
--------------------------------------------------------------------------------
--AAAA-GGTTCAACCAAAATACTGTGCAACG-AAAAAAGCTTCAACCGTTGACAGAAAAAGCTTTAATGATAGATGCAA
AAGATTCAACCAGGACACTGTGCAATGGAAAAAGCTACAACCGTTGACAAAAA-A--GCTTCAATTGTATACGAAAAAGG
CTTCAA-CCGGCGATAGAAAAA-TCTTCCTGGAGGCTCGCGCTTCCATGAAAGCTGCAATGGCCCAGCGAACTGCTACAT
GAGTGCTTTTTTAGTTGTAAATTTATACTGGAAAATATGTAGA-AAACATATAACAATTTTGCTTCCATAGTTTTTTTGT
TTTTTGTTGTGAGC-TTTTTTT-GCACAATGCTACCTATGTT---CTTTTTTCGTTGTAAAAGTACAGAAATTA-TGCTA
CAAAACATATG---A-TTTTTTTATT---TGTGTTTTTTGATTTTTGTTGTGAA-TTTTTGCTGCAATGCTACATACA-A
ATACAGTTTAACAACAAGCGCGGATCTTCTATGTACATTTTTTGATTGAAACTATTGTGTGCACATAGCAGAGAGAAGTC
ACAATCATCATTTGGAGGGGCTCCACCCACGTGACAGCATGCAACATCCACGGCGCATGGGACAAGCGACTTCCGGGCGA
TGCAGGTGGGCCACCAGCGTACAAAAGAA-------A--------AAGGAACGACGTGC-CAGACGATCGGACGGATTAA
AATAATCGAATCGGACGACCTACGCGCGACCGGCAGAAACTTTAGGCCGGTGCGCCGGCGCCCATCAGTCCCC-------
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>chr6A_83
--------------------------------------------------------------------------------
--AAAA-GGTTCAACAAGGATACCGTGCAACGAAAAAAAGCTTCAACCGTTGATAGAAAAAGCTTCAACGGTAGATGCAA
AATATTCAACCAGGACACTG--CAATGGAAAAAGCTACGACCATTGACAAAAA-AATGCTTCAATTGTATATGAAAAAGG
CTTCAA-CCGGCGATAGG-AAAAGCTTCTTGGAGGCTCGCGCTTCCATGAAAGCTGCAATGGCCCAGCAAACTGCTACAT
GAGTGCTTTTTTAGTTGTAAATTTATACTAGAAAATATGTAGA-AAACATATAACAATTTTGCTTCCATAGTTTTT----
TTTT-GTTGTGAGCTTTTTTTT-GCACAATGCTACATACGTT---CTTTTTTCGTTGTAAAAGTACTGAAATTA-TGTTA
CAAA-CATATG---ATTTTTTTTAATTTGTGTTTTTTAGGC-TTTTGTTATGCACTTTTTGCTGCAATGCTACATACA-A
ATACAGTTTAACAATAGGCGCAGATCTTCTGCGTACA-TTTTTTATTGAAACTATTGTGTGCACATAGCAGAGACAAGTC
ACAATCATCATTTTGATGGGCTCCACCCACGTGACAGCATGCAACATCCATGGCGCATGGGACAAGCGACGTCCGGGCGA
TGCTGGTGGGCCACCAGCGTACAAAA-AA-------GGAAGAAGAAAGGAACGATGTGCGTAGACGATCAGACGGATTAA
AATAATCGAATCGGACGACCTACACGCGACCGGCCGAAACTTTT------------------------------------
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>chr7A_847
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----------AGATCGGAGATACAAACAGACCCGGATACAAATATGCATCTCGTTCCAAGTAACAATCGGAGACAGAGTG
ACAGACGACGTGTCGACGTAGGCA---GTACTAGCAGTATATATAATGGTGCAGCACGTAG-------------------
-----------GCCTTGGACGT-------TCCTAACCCACCGCCGAGAAAACAAACGAGCAAACCAACACGTCTCGTTGA
CCACGTTCGCCTCCGATCAGCGACCAAGCCGACCAACCATGGTCAGTATGAAGCTTCCGCCGCAGCCCACGCGCTCGACG
ATCACGGCCACGACGAGCGCCGGTACCCACGAGCTGAAGGTGGAGGGCTACTCCGTGACCAAGCTGCTCGTCGCCGGCGA
GCACATCGAGTCCAGCAAATTCAGGGCCGCGGGCCACGATTTTCAGATCTGCTACTACCC------GCACAGGTACCAGA
AGAAGGACT------------------------------------------------------GCAACGCCAGCATCTCC
TTCTTCCTCAAGATGGCCGAGGCGGTCGCCTCGA---ACGTCCGCGTCGAGTTCCGGTTCAGCCTGGTCTCTCGCCACGG
CGGTGAGCCTGCA------------------------CGTTTTGCTGGTCAGCGCCGCGTGGTGACGTTCCCTGACAAGC
ACGATGGCGTGGAGTACTGGGGCCTGGAGATCTCGAAGAAGGAGCTTGAGCAGTCGCCGGAGTACCTGTGGGACGAACTC
CTTCGTGCTGCGGTGTGAGATCACCGTCGTCGACAAGCCGGTCGTGAAAAGCCACGACGGCCTCGCCGTCTGCCGCTGCA
AGGATGACTTGTGCAAGCGTCGTCACCTGAGAAACACGGCGGATCGCGCATCATGGGTCAAGGACGTAGTCGTCAAGCAC
TTCCTTAGGTGTGTCGGCATATGAAATCATGTATATTGGGGCTGATACATATTATTCAAACCACAGTTTCGGTTATATAA
TTGTAACGATTTTGCGTCACTATATAGTTCAGGTGCGTTAGTTTGAATTGTCGCTGAGAGTGTTATGTATTGATGTGTAG
TGTAGGCCAGGTTCTTGGCTGGTCAACTAATCTAGGTACATATACCATTTCTTGCAATAAATGTTAT-AGATTTGTAATG
AATCTACAATTTTATAT--TTTTAATAAAAGACA-CCCAAAGAGTATCTTA-TATATGATAAATAC-AAGGAAAATTACA
ATGCGCAAACAATTAGACACAGAACGACTAGTAAAAAGATAAAATTACACTGAAAATCATACTATCCTTCTTAGTACAAC
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------------------------TTGTATGACTTCAACCGAGGCTCATGTAGATATAGGGAACTACAAACCGGCTGGGA
TCGCAATTTATGGATCTAACCAACCTACGCCCCCGTGCGGCTTTGACGAGTTGCATGG-GG-CACCCAGTTGATTGTCGG
GGACTCACCTACCTA---TTACTTTCCCCGCACTACCGTCATAGGCGGATGTCAGACCGATGGTGACAACAATGATGGGG
CCTTTTCTTCGGTGCATAGGCGCGAGATGGGTGGCGTGGAGGTTAAGCGATGCAACTTCACATTTTGTGAGTAATAGCTA
GGTTGAGCAGGGTCGCCACGGTGGATGGGTGCACAATGGCGCAGCAAGAAGCCCTCCCCTTGGATTAGTAGCCTTGAACA
CCCCGCTAGTAGAAAAACAGGCATTAGCAGTCTGCCACGA----
>chr7D_857
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--------------------TAGAAACAGACCCGG-TACAGATATGCAACTCGTTCCAAGTAACAA-----GACAGAGTG
GCGGACAAAGGGTCGACGTAGGCTGTTGTACTAGCAGTATATATAACGGTGCAGCACGTAC-------------------
-----------GCCATGGACGT-------TCCAAACCCACCGCCGAGAAAACAAACGAGCAAACCAACACATCTCGTCGA
CAAAGTTCGCCTCCGATACGATCAG----CGATCAATCATGGTCAGCATGAAGCTTCCGCCGCCGACCACGCGCTCGACG
ATCACCGCCACGACGAGCGTCGGCACCCACGAGCTCAAGGTGGAGGGCTACTCCGAGACCAAGCTGCTCGCCGCCAGCGA
GCACATCGAGTCCAGCAAGTTCAGGGCGGCGGGCCACGATTTTCAGATCTGCTACTATCCGCATAGGCACAGGTACCAGA
AGATTGACT------------------------------------------------------GCAACGCCAACATCTCC
TTCTTCCTCAAGATGGCCGAGGCGGCCGCCTCGA---ACGTCCGCGTTGAGTTCCGGTTCAGTCTGGTCTCTCGCCACGG
CGGTGAGCCTGCA------------------------CGTTTTGCTGGTGAGCGCCGCGTGGTGACGTTCCCTCACGAGC
ACGGTGGCGTCGAGTACTGGGGCCTGGCGATCTCGAAGAAG---CTTGAGGAGTCGCTGGAGTACCTGGGGGACGA-CTC
CTTCGTACTGCTGTGTGAGATCACCGTCGTCGACAAGCCGGTCGTCAAAAGCGATGACGGCCTCGCCGTCTGCCGCTGCA
AGGATGACCTGTCCAAGCGTCGTCACCTGAGAAACACGGCGGATCGCGCCTCATGGGTCAAGGACGTAGTCGTCAAGCAC
TTCCTTAGGTGTTTCGGCATATGAAATCATGTATATTGGGGCTCATACATATTATTTAAACCACAGTTTCGATTTTGTAA
CTGTAACAATTTTGCGTCACTATATAGTTCAGGTGCGTTAGTTTGAATTGTCGCTGAGAGTGTTATGT------GAT--G
TGTAGGCCAGGTCCTTGGCTGGTCAACTAATCTAGGTACATATACCATTTCTTGCAATAAATGTTATTAGATTTGTAATG
AATCTACAATTTTATCT--TTTTAATAAAAGACACCCAAAAGAGTATCTTA-TATATGATTAATACCAAGGAAAATTACA
ATAGACAAACAATTAGAGACAGAACGAGCAGTAAAAAGATAAAATTACACTGAAAATCATAATAGCTTTCCTAGTACAAC
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------------------------TTGTATGACTTCTACCGAGGCACATGTAGATATAGGGAACTACAAACCGGCTGGGA
TCGCAATTTACGGATCTAACCAACCTACGCCGCCGTGCGGCTTTGACGAGTTGCATAGTGG-CGCCCAGTTGATTGTTGG
GGACTCACCTACCTAGTATTACTTTACCCGCACTATCGTCATAGGCGGATGTCGGACCGATGGTGACAACAATGATGGGG
CCTTTTCTTCGGTGCATAGGCGCGAGATGCGTGGCGTGGAGGTTAAGCGATGCAACTTCACATTTTGTGTGTAATAGCTA
GGTTGAGCAGGGTCGCCATGGTGGATGGGTGCACAATGGCGCAGCAAGAAGCCCTCCCCTTGGATTAGTAGCCTTGAACA
CCCCACTAGTAGAAAAGCGGGCATTAGCAGTGTGCCCACGACAG
>chr7B_878
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-----------------------------------------------ATCTCGTTCCAAGTAACAATCGGAGACAGAGTG
GCAGACG-ACGTTTGACCTAGGCAGTACTA-TAGCAGTATATATAACGGTGCAGCGCGTAC-------------------
-----------GCCTTGGACGTTCCAAAATCCAAACCCACCGCCGAGAAAACAAACGAGCGAACCAACATACCTCGTCGA
CCACGCTAGCCTCCGATCCGATCAG----CGACCAACCATGGTCGGCATGAAGCTTCCGCCGCCGCCCACGCGCTCGACG
ATCACCACCACGGCGAGCGCCGGCTCCCACGAGCTCAAGGTGGAGGGCTACTCCGTGACCAAGCTGCTCGTCGACGGCGA
GCGCATCGAGTCCAGCAAGTTCAGGGCGGCGGGCCACGATTTTCAGATCTGCTACTACCC------GAACAAGTACCGGA
AGAAGGACTGCAACGCCGGGAGAATAGCAGCCCCTCCCGGAGCGCAGATGCTCCACGCCGGGAGCAACGCCACCATCTCG
TTCTTCCTCAAGTTGGCCGGCGGCAGCAAGGGCAAGGACGTCCGCGCCGAGTTCCGGTTCAGCCTGGTCCCTCGCCACGG
CGGCGAGCCTGCAGCACCGGGGGCGCCGGCGAAGGTCCGGTTTGCAGGTGAACGCCACGTGGTGACGTTCCCTCGCAAGC
ACAATGGCGTTGAGTACTGGGGCCTGAAGATCTCGAAGAAGGAGCTTGAGAAGTCGCCGGAGTACCTCTGGGACGA-TTC
CTTCGTCATGCGGTGCGAGATCTCCGTCGTTGAGAAGCCGGTCGTGAGAAGCCATGACTTCACT---GTCTGCCGCTGCA
AGGATGACTTGTGCAAGCGTCATCATCTGACGG------------GCGCCTCACTTGTCAAGGACGTAGTCGTCAACTAC
TTTCTTAGGTGTCTCGGCATAT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr7D_878
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATCTCGTTCCAAGTAACAATCGGAGACAGAGTG
GCAGACGACGTGTCGACCTAGGCAGTACTA-TAGCAGTATATATAACGGTGCAGCACGTAC-------------------
-----------GCCTTGGACGTTCCAAAATCCAAACCCACCGCCGAGAAAACAAACGAGCAAACCAACATATCTCGTCGA
CCACGCTAGCCTCCGATCCGATCAG----AGACCAACCATGGTCGGCATGAAGCTTCCGCCGCCGCCCACGCGCTCGACG
ATCACCACCACGACGAGCGCCGGCTCTCACGAGCTCAAGGTGGAGGGCTACTCCGTGACCAAGCTGCTCGTCGACGGCGA
GCGCATCGAGTCCAGCAAGTTCAGGGCGGCGGGCCACGATTTTCAGATCTGCTACTACCC------GAACAAGTACCGTA
AGAAGGACTGCAACACCGGGAGAATATCAGCCCCTCCCGGAGCGCAGATGCTCCACGCCGGGAGCAACGCCACCATCTCG
TTCTTCCTCAAGTTGGCCGGCGGCAGCAAGGGCAAGGACGTCCGCGCCGAGTTCCAGTTCAGCCTGGTCCCTCGGCACGG
CGGCGAGCCTGCAGCACCGGGGGCGCCGGCGAAGGTCCGGTTTGTTGGTGAACGCCACGTGGTGACGTTCCCTCGGAAGC
ACAATGGCGTTGAGTACTGGGGCCTGAAGATCTCGAAGAAGGAGCTCGAGAAGTCGCCGGAGTACCTCTGGGACGA-TTC
CTTCGTCGTGCGGTGCGAGATCTCCGTCGTCGAGAAGCCGATCGTGAGAAGCCATGACTTCATG---GTCTGCCGCTGCA
AGGATGACTTGTGCAAGCATCATCATCTGACGG------------GCGCCTCACTGGTCAAGGACGTAGTCGTCAACTAC
TTTCTTAAGTGTCTCGGTATATAAAAT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>SNPs
-----------------------------S--------------------------------------------------
-----------------------------------------------------------------------------S--
-----------------------------------S-------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
----------------------------------S---------------------------------------------
-------------------------------------------------------S------------------------
---------------------------------S------------------------------------------SSSS
SSSSSSSSSS----------------------------------S-----------------------------------
---S---------------------------------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS--------------------------S------------------------------------------
-----------S--------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S--------------SS------------------------
------------------------------------------------S-------------------------------
----S----------------------------------------------S----------------------------
---S---S--------------------S---------------------------------------------------
-----------------------------------------------------------------------S--------
-------------------------------------------------------S------------------------
--------------------------------------------S------------------------S-SS-------
--------------------------------------------------------------------------------
-----S---------S-SS-------------S------------------S------------------------S---
--------------S------------------------------S--S---------S-----------S-------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS-----S--------------------------------------------------
------------S--------------S-----S---S-----------------------S------------------
--S--S----------------------------S---------------------S-S--------S----S-------
-----------------------------------S--------------------------------------------
-------------S-S-S---------------------------------S----S-------------------S---
------S-------------S-------------------SSS-
>forward_1031
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CAGCACGTACGCCTTGGATA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2340
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGGGTGTACTACGGACAGCT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
