Multiple sequence alignment - TraesCS7B01G313000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G313000 chr7B 100.000 2285 0 0 1 2285 558993559 558991275 0.000000e+00 4220.0
1 TraesCS7B01G313000 chr7B 99.876 805 1 0 1481 2285 665142202 665141398 0.000000e+00 1482.0
2 TraesCS7B01G313000 chr7B 89.027 565 37 17 876 1438 558760312 558759771 0.000000e+00 676.0
3 TraesCS7B01G313000 chr7B 83.642 593 67 13 1481 2054 735819347 735818766 4.320000e-147 531.0
4 TraesCS7B01G313000 chr7B 90.437 366 32 3 876 1239 558981637 558981273 1.590000e-131 479.0
5 TraesCS7B01G313000 chr7B 88.182 330 33 4 384 709 558760632 558760305 2.750000e-104 388.0
6 TraesCS7B01G313000 chr7B 95.109 184 4 4 1108 1290 558929769 558929948 3.720000e-73 285.0
7 TraesCS7B01G313000 chr7B 93.210 162 9 2 714 874 662062695 662062855 1.060000e-58 237.0
8 TraesCS7B01G313000 chr7B 91.250 160 10 3 328 483 558760832 558760673 4.940000e-52 215.0
9 TraesCS7B01G313000 chr7B 92.958 142 9 1 569 709 558929495 558929636 2.980000e-49 206.0
10 TraesCS7B01G313000 chr7B 86.826 167 10 3 876 1042 558929629 558929783 2.330000e-40 176.0
11 TraesCS7B01G313000 chr6B 96.442 787 15 3 1482 2259 573351443 573350661 0.000000e+00 1286.0
12 TraesCS7B01G313000 chr6B 92.638 163 12 0 714 876 152213157 152212995 3.790000e-58 235.0
13 TraesCS7B01G313000 chr6B 86.667 60 5 3 322 379 657094285 657094343 1.900000e-06 63.9
14 TraesCS7B01G313000 chr6B 86.441 59 6 2 322 379 657159289 657159346 1.900000e-06 63.9
15 TraesCS7B01G313000 chr6B 89.362 47 3 2 316 361 657222742 657222787 8.820000e-05 58.4
16 TraesCS7B01G313000 chr1B 96.889 450 9 2 1711 2159 554739864 554739419 0.000000e+00 749.0
17 TraesCS7B01G313000 chr1B 93.981 216 13 0 1482 1697 554748184 554747969 6.090000e-86 327.0
18 TraesCS7B01G313000 chr1B 98.507 134 2 0 2152 2285 554739039 554738906 1.060000e-58 237.0
19 TraesCS7B01G313000 chr7D 90.426 564 39 8 876 1438 523392549 523393098 0.000000e+00 728.0
20 TraesCS7B01G313000 chr2D 85.341 689 50 19 1479 2145 511656265 511656924 0.000000e+00 665.0
21 TraesCS7B01G313000 chr2D 83.178 321 33 11 6 324 606698562 606698261 8.040000e-70 274.0
22 TraesCS7B01G313000 chr2D 78.261 115 23 2 1482 1595 75649995 75649882 3.150000e-09 73.1
23 TraesCS7B01G313000 chr7A 83.160 481 49 12 1471 1924 276544727 276545202 5.870000e-111 411.0
24 TraesCS7B01G313000 chr6D 83.648 318 31 7 6 321 222660463 222660165 1.730000e-71 279.0
25 TraesCS7B01G313000 chr6D 86.792 53 5 2 329 379 434445641 434445693 8.820000e-05 58.4
26 TraesCS7B01G313000 chr5B 93.333 165 9 2 714 877 443181789 443181626 2.270000e-60 243.0
27 TraesCS7B01G313000 chr5B 92.638 163 12 0 714 876 259848593 259848755 3.790000e-58 235.0
28 TraesCS7B01G313000 chr3B 93.252 163 11 0 714 876 268742899 268743061 8.160000e-60 241.0
29 TraesCS7B01G313000 chr3B 94.737 38 1 1 328 364 773422559 773422522 8.820000e-05 58.4
30 TraesCS7B01G313000 chrUn 91.860 172 13 1 708 879 34092441 34092611 2.930000e-59 239.0
31 TraesCS7B01G313000 chrUn 88.043 184 14 5 35 215 88502146 88502324 6.400000e-51 211.0
32 TraesCS7B01G313000 chr3D 92.121 165 13 0 714 878 569524710 569524546 1.360000e-57 233.0
33 TraesCS7B01G313000 chr1A 92.169 166 11 2 714 878 514889260 514889096 1.360000e-57 233.0
34 TraesCS7B01G313000 chr1A 92.169 166 11 2 714 878 515145525 515145361 1.360000e-57 233.0
35 TraesCS7B01G313000 chr1A 95.000 40 2 0 322 361 480754113 480754152 1.900000e-06 63.9
36 TraesCS7B01G313000 chr2B 90.196 51 3 2 329 378 90713670 90713719 5.270000e-07 65.8
37 TraesCS7B01G313000 chr6A 95.122 41 1 1 322 361 581738080 581738120 1.900000e-06 63.9
38 TraesCS7B01G313000 chr1D 91.304 46 4 0 1710 1755 371767674 371767629 1.900000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G313000 chr7B 558991275 558993559 2284 True 4220.000000 4220 100.000000 1 2285 1 chr7B.!!$R2 2284
1 TraesCS7B01G313000 chr7B 665141398 665142202 804 True 1482.000000 1482 99.876000 1481 2285 1 chr7B.!!$R3 804
2 TraesCS7B01G313000 chr7B 735818766 735819347 581 True 531.000000 531 83.642000 1481 2054 1 chr7B.!!$R4 573
3 TraesCS7B01G313000 chr7B 558759771 558760832 1061 True 426.333333 676 89.486333 328 1438 3 chr7B.!!$R5 1110
4 TraesCS7B01G313000 chr6B 573350661 573351443 782 True 1286.000000 1286 96.442000 1482 2259 1 chr6B.!!$R2 777
5 TraesCS7B01G313000 chr1B 554738906 554739864 958 True 493.000000 749 97.698000 1711 2285 2 chr1B.!!$R2 574
6 TraesCS7B01G313000 chr7D 523392549 523393098 549 False 728.000000 728 90.426000 876 1438 1 chr7D.!!$F1 562
7 TraesCS7B01G313000 chr2D 511656265 511656924 659 False 665.000000 665 85.341000 1479 2145 1 chr2D.!!$F1 666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
871 1020 0.033642 GAATACTCCTAGTGCCGCCC 59.966 60.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2231 2802 2.264794 GATCAAGACACGGGCGGT 59.735 61.111 0.0 0.0 0.0 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.914289 GGGCTGATGAGGTGGGAG 59.086 66.667 0.00 0.00 0.00 4.30
18 19 2.750657 GGGCTGATGAGGTGGGAGG 61.751 68.421 0.00 0.00 0.00 4.30
19 20 2.750657 GGCTGATGAGGTGGGAGGG 61.751 68.421 0.00 0.00 0.00 4.30
20 21 2.750657 GCTGATGAGGTGGGAGGGG 61.751 68.421 0.00 0.00 0.00 4.79
21 22 2.042762 TGATGAGGTGGGAGGGGG 59.957 66.667 0.00 0.00 0.00 5.40
35 36 3.994000 GGGGGAGGAGAATGGAGG 58.006 66.667 0.00 0.00 0.00 4.30
36 37 1.772156 GGGGGAGGAGAATGGAGGG 60.772 68.421 0.00 0.00 0.00 4.30
37 38 1.772156 GGGGAGGAGAATGGAGGGG 60.772 68.421 0.00 0.00 0.00 4.79
38 39 2.456443 GGGAGGAGAATGGAGGGGC 61.456 68.421 0.00 0.00 0.00 5.80
39 40 1.385206 GGAGGAGAATGGAGGGGCT 60.385 63.158 0.00 0.00 0.00 5.19
40 41 1.414866 GGAGGAGAATGGAGGGGCTC 61.415 65.000 0.00 0.00 0.00 4.70
41 42 1.753368 GAGGAGAATGGAGGGGCTCG 61.753 65.000 0.00 0.00 0.00 5.03
42 43 2.066999 GGAGAATGGAGGGGCTCGT 61.067 63.158 0.00 0.00 0.00 4.18
43 44 1.144936 GAGAATGGAGGGGCTCGTG 59.855 63.158 0.00 0.00 0.00 4.35
44 45 1.613630 AGAATGGAGGGGCTCGTGT 60.614 57.895 0.00 0.00 0.00 4.49
45 46 1.201429 AGAATGGAGGGGCTCGTGTT 61.201 55.000 0.00 0.00 0.00 3.32
46 47 1.002134 AATGGAGGGGCTCGTGTTG 60.002 57.895 0.00 0.00 0.00 3.33
47 48 2.484287 AATGGAGGGGCTCGTGTTGG 62.484 60.000 0.00 0.00 0.00 3.77
48 49 3.319198 GGAGGGGCTCGTGTTGGA 61.319 66.667 0.00 0.00 0.00 3.53
49 50 2.670148 GGAGGGGCTCGTGTTGGAT 61.670 63.158 0.00 0.00 0.00 3.41
50 51 1.335132 GGAGGGGCTCGTGTTGGATA 61.335 60.000 0.00 0.00 0.00 2.59
51 52 0.539986 GAGGGGCTCGTGTTGGATAA 59.460 55.000 0.00 0.00 0.00 1.75
52 53 0.541863 AGGGGCTCGTGTTGGATAAG 59.458 55.000 0.00 0.00 0.00 1.73
53 54 0.539986 GGGGCTCGTGTTGGATAAGA 59.460 55.000 0.00 0.00 0.00 2.10
54 55 1.473434 GGGGCTCGTGTTGGATAAGAG 60.473 57.143 0.00 0.00 0.00 2.85
55 56 1.480954 GGGCTCGTGTTGGATAAGAGA 59.519 52.381 0.00 0.00 0.00 3.10
56 57 2.103263 GGGCTCGTGTTGGATAAGAGAT 59.897 50.000 0.00 0.00 0.00 2.75
57 58 3.432326 GGGCTCGTGTTGGATAAGAGATT 60.432 47.826 0.00 0.00 0.00 2.40
58 59 4.202223 GGGCTCGTGTTGGATAAGAGATTA 60.202 45.833 0.00 0.00 0.00 1.75
59 60 5.511545 GGGCTCGTGTTGGATAAGAGATTAT 60.512 44.000 0.00 0.00 0.00 1.28
60 61 6.295123 GGGCTCGTGTTGGATAAGAGATTATA 60.295 42.308 0.00 0.00 0.00 0.98
61 62 6.809196 GGCTCGTGTTGGATAAGAGATTATAG 59.191 42.308 0.00 0.00 0.00 1.31
62 63 7.371936 GCTCGTGTTGGATAAGAGATTATAGT 58.628 38.462 0.00 0.00 0.00 2.12
63 64 7.327275 GCTCGTGTTGGATAAGAGATTATAGTG 59.673 40.741 0.00 0.00 0.00 2.74
64 65 7.658261 TCGTGTTGGATAAGAGATTATAGTGG 58.342 38.462 0.00 0.00 0.00 4.00
65 66 6.366332 CGTGTTGGATAAGAGATTATAGTGGC 59.634 42.308 0.00 0.00 0.00 5.01
66 67 6.651225 GTGTTGGATAAGAGATTATAGTGGCC 59.349 42.308 0.00 0.00 0.00 5.36
67 68 6.328934 TGTTGGATAAGAGATTATAGTGGCCA 59.671 38.462 0.00 0.00 0.00 5.36
68 69 6.611613 TGGATAAGAGATTATAGTGGCCAG 57.388 41.667 5.11 0.00 0.00 4.85
69 70 5.485353 TGGATAAGAGATTATAGTGGCCAGG 59.515 44.000 5.11 0.00 0.00 4.45
70 71 5.104735 GGATAAGAGATTATAGTGGCCAGGG 60.105 48.000 5.11 0.00 0.00 4.45
71 72 3.637821 AGAGATTATAGTGGCCAGGGA 57.362 47.619 5.11 0.00 0.00 4.20
72 73 3.515562 AGAGATTATAGTGGCCAGGGAG 58.484 50.000 5.11 0.00 0.00 4.30
73 74 1.981495 AGATTATAGTGGCCAGGGAGC 59.019 52.381 5.11 0.00 0.00 4.70
74 75 1.981495 GATTATAGTGGCCAGGGAGCT 59.019 52.381 5.11 0.69 0.00 4.09
75 76 1.424638 TTATAGTGGCCAGGGAGCTC 58.575 55.000 5.11 4.71 0.00 4.09
76 77 0.827925 TATAGTGGCCAGGGAGCTCG 60.828 60.000 5.11 0.00 0.00 5.03
84 85 4.761058 AGGGAGCTCGCCGGAGAA 62.761 66.667 25.68 0.00 43.27 2.87
85 86 4.214327 GGGAGCTCGCCGGAGAAG 62.214 72.222 19.61 4.86 43.27 2.85
86 87 4.882396 GGAGCTCGCCGGAGAAGC 62.882 72.222 9.83 14.53 43.27 3.86
87 88 4.135153 GAGCTCGCCGGAGAAGCA 62.135 66.667 23.59 0.00 43.27 3.91
88 89 3.649277 GAGCTCGCCGGAGAAGCAA 62.649 63.158 23.59 0.00 43.27 3.91
89 90 3.191539 GCTCGCCGGAGAAGCAAG 61.192 66.667 19.26 6.00 43.27 4.01
90 91 3.191539 CTCGCCGGAGAAGCAAGC 61.192 66.667 9.83 0.00 43.27 4.01
91 92 4.760047 TCGCCGGAGAAGCAAGCC 62.760 66.667 5.05 0.00 0.00 4.35
97 98 4.760047 GAGAAGCAAGCCGGCGGA 62.760 66.667 33.44 0.00 39.27 5.54
98 99 4.101448 AGAAGCAAGCCGGCGGAT 62.101 61.111 33.44 24.23 39.27 4.18
99 100 3.577313 GAAGCAAGCCGGCGGATC 61.577 66.667 33.44 13.30 39.27 3.36
107 108 3.610669 CCGGCGGATCCAGGAGAG 61.611 72.222 24.41 0.00 32.51 3.20
108 109 3.610669 CGGCGGATCCAGGAGAGG 61.611 72.222 13.41 0.00 34.01 3.69
109 110 2.444895 GGCGGATCCAGGAGAGGT 60.445 66.667 13.41 0.00 34.01 3.85
110 111 2.801631 GGCGGATCCAGGAGAGGTG 61.802 68.421 13.41 0.00 34.01 4.00
111 112 2.060980 GCGGATCCAGGAGAGGTGT 61.061 63.158 13.41 0.00 0.00 4.16
112 113 1.819229 CGGATCCAGGAGAGGTGTG 59.181 63.158 13.41 0.00 0.00 3.82
113 114 1.524482 GGATCCAGGAGAGGTGTGC 59.476 63.158 6.95 0.00 0.00 4.57
114 115 1.524482 GATCCAGGAGAGGTGTGCC 59.476 63.158 0.00 0.00 0.00 5.01
115 116 1.977293 GATCCAGGAGAGGTGTGCCC 61.977 65.000 0.00 0.00 34.57 5.36
116 117 2.770868 ATCCAGGAGAGGTGTGCCCA 62.771 60.000 0.00 0.00 34.66 5.36
117 118 2.304056 CCAGGAGAGGTGTGCCCAT 61.304 63.158 0.00 0.00 34.66 4.00
118 119 1.077930 CAGGAGAGGTGTGCCCATG 60.078 63.158 0.00 0.00 34.66 3.66
119 120 2.273449 GGAGAGGTGTGCCCATGG 59.727 66.667 4.14 4.14 34.66 3.66
120 121 2.606587 GGAGAGGTGTGCCCATGGT 61.607 63.158 11.73 0.00 34.66 3.55
121 122 1.078143 GAGAGGTGTGCCCATGGTC 60.078 63.158 11.73 0.00 34.66 4.02
122 123 2.436646 GAGGTGTGCCCATGGTCG 60.437 66.667 11.73 0.00 34.66 4.79
123 124 4.722700 AGGTGTGCCCATGGTCGC 62.723 66.667 11.73 4.91 34.66 5.19
124 125 4.722700 GGTGTGCCCATGGTCGCT 62.723 66.667 11.73 0.00 0.00 4.93
125 126 2.672996 GTGTGCCCATGGTCGCTT 60.673 61.111 11.73 0.00 0.00 4.68
126 127 2.672651 TGTGCCCATGGTCGCTTG 60.673 61.111 11.73 0.00 0.00 4.01
127 128 2.359850 GTGCCCATGGTCGCTTGA 60.360 61.111 11.73 0.00 0.00 3.02
128 129 2.046023 TGCCCATGGTCGCTTGAG 60.046 61.111 11.73 0.00 0.00 3.02
129 130 2.268920 GCCCATGGTCGCTTGAGA 59.731 61.111 11.73 0.00 0.00 3.27
130 131 1.377202 GCCCATGGTCGCTTGAGAA 60.377 57.895 11.73 0.00 0.00 2.87
131 132 1.372087 GCCCATGGTCGCTTGAGAAG 61.372 60.000 11.73 0.00 0.00 2.85
132 133 0.250234 CCCATGGTCGCTTGAGAAGA 59.750 55.000 11.73 0.00 0.00 2.87
133 134 1.649664 CCATGGTCGCTTGAGAAGAG 58.350 55.000 2.57 0.00 0.00 2.85
134 135 1.205655 CCATGGTCGCTTGAGAAGAGA 59.794 52.381 2.57 0.00 34.86 3.10
135 136 2.538437 CATGGTCGCTTGAGAAGAGAG 58.462 52.381 0.00 0.00 38.01 3.20
136 137 1.911057 TGGTCGCTTGAGAAGAGAGA 58.089 50.000 0.00 0.00 38.01 3.10
137 138 2.451490 TGGTCGCTTGAGAAGAGAGAT 58.549 47.619 0.00 0.00 38.01 2.75
138 139 2.165234 TGGTCGCTTGAGAAGAGAGATG 59.835 50.000 0.00 0.00 38.01 2.90
139 140 2.481104 GGTCGCTTGAGAAGAGAGATGG 60.481 54.545 0.00 0.00 38.01 3.51
140 141 2.425312 GTCGCTTGAGAAGAGAGATGGA 59.575 50.000 0.00 0.00 38.01 3.41
141 142 2.687425 TCGCTTGAGAAGAGAGATGGAG 59.313 50.000 0.00 0.00 32.19 3.86
142 143 2.223782 CGCTTGAGAAGAGAGATGGAGG 60.224 54.545 0.00 0.00 0.00 4.30
143 144 3.030291 GCTTGAGAAGAGAGATGGAGGA 58.970 50.000 0.00 0.00 0.00 3.71
144 145 3.181476 GCTTGAGAAGAGAGATGGAGGAC 60.181 52.174 0.00 0.00 0.00 3.85
145 146 2.649190 TGAGAAGAGAGATGGAGGACG 58.351 52.381 0.00 0.00 0.00 4.79
146 147 2.239907 TGAGAAGAGAGATGGAGGACGA 59.760 50.000 0.00 0.00 0.00 4.20
147 148 3.117701 TGAGAAGAGAGATGGAGGACGAT 60.118 47.826 0.00 0.00 0.00 3.73
148 149 3.221771 AGAAGAGAGATGGAGGACGATG 58.778 50.000 0.00 0.00 0.00 3.84
149 150 1.993956 AGAGAGATGGAGGACGATGG 58.006 55.000 0.00 0.00 0.00 3.51
150 151 0.965439 GAGAGATGGAGGACGATGGG 59.035 60.000 0.00 0.00 0.00 4.00
151 152 0.558220 AGAGATGGAGGACGATGGGA 59.442 55.000 0.00 0.00 0.00 4.37
152 153 0.965439 GAGATGGAGGACGATGGGAG 59.035 60.000 0.00 0.00 0.00 4.30
153 154 0.470833 AGATGGAGGACGATGGGAGG 60.471 60.000 0.00 0.00 0.00 4.30
154 155 1.460305 ATGGAGGACGATGGGAGGG 60.460 63.158 0.00 0.00 0.00 4.30
155 156 1.961381 ATGGAGGACGATGGGAGGGA 61.961 60.000 0.00 0.00 0.00 4.20
156 157 1.834822 GGAGGACGATGGGAGGGAG 60.835 68.421 0.00 0.00 0.00 4.30
157 158 1.230497 GAGGACGATGGGAGGGAGA 59.770 63.158 0.00 0.00 0.00 3.71
158 159 0.397254 GAGGACGATGGGAGGGAGAA 60.397 60.000 0.00 0.00 0.00 2.87
159 160 0.042731 AGGACGATGGGAGGGAGAAA 59.957 55.000 0.00 0.00 0.00 2.52
160 161 0.909623 GGACGATGGGAGGGAGAAAA 59.090 55.000 0.00 0.00 0.00 2.29
161 162 1.134371 GGACGATGGGAGGGAGAAAAG 60.134 57.143 0.00 0.00 0.00 2.27
162 163 1.831736 GACGATGGGAGGGAGAAAAGA 59.168 52.381 0.00 0.00 0.00 2.52
163 164 1.834263 ACGATGGGAGGGAGAAAAGAG 59.166 52.381 0.00 0.00 0.00 2.85
164 165 2.111384 CGATGGGAGGGAGAAAAGAGA 58.889 52.381 0.00 0.00 0.00 3.10
165 166 2.501723 CGATGGGAGGGAGAAAAGAGAA 59.498 50.000 0.00 0.00 0.00 2.87
166 167 3.055094 CGATGGGAGGGAGAAAAGAGAAA 60.055 47.826 0.00 0.00 0.00 2.52
167 168 4.565652 CGATGGGAGGGAGAAAAGAGAAAA 60.566 45.833 0.00 0.00 0.00 2.29
168 169 4.806952 TGGGAGGGAGAAAAGAGAAAAA 57.193 40.909 0.00 0.00 0.00 1.94
190 191 8.848474 AAAAACGATGAAAGGAAGAGATAAGA 57.152 30.769 0.00 0.00 0.00 2.10
191 192 8.848474 AAAACGATGAAAGGAAGAGATAAGAA 57.152 30.769 0.00 0.00 0.00 2.52
192 193 7.835634 AACGATGAAAGGAAGAGATAAGAAC 57.164 36.000 0.00 0.00 0.00 3.01
193 194 6.037098 ACGATGAAAGGAAGAGATAAGAACG 58.963 40.000 0.00 0.00 0.00 3.95
194 195 6.127703 ACGATGAAAGGAAGAGATAAGAACGA 60.128 38.462 0.00 0.00 0.00 3.85
195 196 6.752351 CGATGAAAGGAAGAGATAAGAACGAA 59.248 38.462 0.00 0.00 0.00 3.85
196 197 7.253817 CGATGAAAGGAAGAGATAAGAACGAAC 60.254 40.741 0.00 0.00 0.00 3.95
197 198 6.755206 TGAAAGGAAGAGATAAGAACGAACA 58.245 36.000 0.00 0.00 0.00 3.18
198 199 7.214381 TGAAAGGAAGAGATAAGAACGAACAA 58.786 34.615 0.00 0.00 0.00 2.83
199 200 7.713507 TGAAAGGAAGAGATAAGAACGAACAAA 59.286 33.333 0.00 0.00 0.00 2.83
200 201 7.659652 AAGGAAGAGATAAGAACGAACAAAG 57.340 36.000 0.00 0.00 0.00 2.77
201 202 6.994221 AGGAAGAGATAAGAACGAACAAAGA 58.006 36.000 0.00 0.00 0.00 2.52
202 203 7.616313 AGGAAGAGATAAGAACGAACAAAGAT 58.384 34.615 0.00 0.00 0.00 2.40
203 204 8.750298 AGGAAGAGATAAGAACGAACAAAGATA 58.250 33.333 0.00 0.00 0.00 1.98
204 205 9.367444 GGAAGAGATAAGAACGAACAAAGATAA 57.633 33.333 0.00 0.00 0.00 1.75
210 211 9.922305 GATAAGAACGAACAAAGATAAGAATGG 57.078 33.333 0.00 0.00 0.00 3.16
211 212 7.979444 AAGAACGAACAAAGATAAGAATGGA 57.021 32.000 0.00 0.00 0.00 3.41
212 213 7.979444 AGAACGAACAAAGATAAGAATGGAA 57.021 32.000 0.00 0.00 0.00 3.53
213 214 8.034058 AGAACGAACAAAGATAAGAATGGAAG 57.966 34.615 0.00 0.00 0.00 3.46
214 215 6.183309 ACGAACAAAGATAAGAATGGAAGC 57.817 37.500 0.00 0.00 0.00 3.86
215 216 5.705441 ACGAACAAAGATAAGAATGGAAGCA 59.295 36.000 0.00 0.00 0.00 3.91
216 217 6.128172 ACGAACAAAGATAAGAATGGAAGCAG 60.128 38.462 0.00 0.00 0.00 4.24
217 218 6.092670 CGAACAAAGATAAGAATGGAAGCAGA 59.907 38.462 0.00 0.00 0.00 4.26
218 219 6.998968 ACAAAGATAAGAATGGAAGCAGAG 57.001 37.500 0.00 0.00 0.00 3.35
219 220 6.715280 ACAAAGATAAGAATGGAAGCAGAGA 58.285 36.000 0.00 0.00 0.00 3.10
220 221 6.822676 ACAAAGATAAGAATGGAAGCAGAGAG 59.177 38.462 0.00 0.00 0.00 3.20
221 222 6.805016 AAGATAAGAATGGAAGCAGAGAGA 57.195 37.500 0.00 0.00 0.00 3.10
222 223 6.805016 AGATAAGAATGGAAGCAGAGAGAA 57.195 37.500 0.00 0.00 0.00 2.87
223 224 6.819284 AGATAAGAATGGAAGCAGAGAGAAG 58.181 40.000 0.00 0.00 0.00 2.85
224 225 6.610830 AGATAAGAATGGAAGCAGAGAGAAGA 59.389 38.462 0.00 0.00 0.00 2.87
225 226 5.697082 AAGAATGGAAGCAGAGAGAAGAT 57.303 39.130 0.00 0.00 0.00 2.40
226 227 6.805016 AAGAATGGAAGCAGAGAGAAGATA 57.195 37.500 0.00 0.00 0.00 1.98
227 228 6.160576 AGAATGGAAGCAGAGAGAAGATAC 57.839 41.667 0.00 0.00 0.00 2.24
228 229 4.582701 ATGGAAGCAGAGAGAAGATACG 57.417 45.455 0.00 0.00 0.00 3.06
229 230 3.357203 TGGAAGCAGAGAGAAGATACGT 58.643 45.455 0.00 0.00 0.00 3.57
230 231 3.129462 TGGAAGCAGAGAGAAGATACGTG 59.871 47.826 0.00 0.00 0.00 4.49
231 232 3.490078 GGAAGCAGAGAGAAGATACGTGG 60.490 52.174 0.00 0.00 0.00 4.94
232 233 1.407258 AGCAGAGAGAAGATACGTGGC 59.593 52.381 0.00 0.00 0.00 5.01
233 234 1.135139 GCAGAGAGAAGATACGTGGCA 59.865 52.381 0.00 0.00 0.00 4.92
234 235 2.417379 GCAGAGAGAAGATACGTGGCAA 60.417 50.000 0.00 0.00 0.00 4.52
235 236 3.849911 CAGAGAGAAGATACGTGGCAAA 58.150 45.455 0.00 0.00 0.00 3.68
236 237 4.245660 CAGAGAGAAGATACGTGGCAAAA 58.754 43.478 0.00 0.00 0.00 2.44
237 238 4.872691 CAGAGAGAAGATACGTGGCAAAAT 59.127 41.667 0.00 0.00 0.00 1.82
238 239 4.872691 AGAGAGAAGATACGTGGCAAAATG 59.127 41.667 0.00 0.00 0.00 2.32
239 240 3.941483 AGAGAAGATACGTGGCAAAATGG 59.059 43.478 0.00 0.00 0.00 3.16
240 241 3.938963 GAGAAGATACGTGGCAAAATGGA 59.061 43.478 0.00 0.00 0.00 3.41
241 242 3.689649 AGAAGATACGTGGCAAAATGGAC 59.310 43.478 0.00 0.00 0.00 4.02
242 243 2.006888 AGATACGTGGCAAAATGGACG 58.993 47.619 0.00 0.00 37.82 4.79
243 244 0.450184 ATACGTGGCAAAATGGACGC 59.550 50.000 0.00 0.00 35.21 5.19
244 245 2.501650 CGTGGCAAAATGGACGCG 60.502 61.111 3.53 3.53 44.06 6.01
245 246 2.126502 GTGGCAAAATGGACGCGG 60.127 61.111 12.47 0.00 0.00 6.46
246 247 3.369400 TGGCAAAATGGACGCGGG 61.369 61.111 12.47 0.00 0.00 6.13
247 248 3.370231 GGCAAAATGGACGCGGGT 61.370 61.111 12.47 4.12 0.00 5.28
248 249 2.178273 GCAAAATGGACGCGGGTC 59.822 61.111 23.30 23.30 42.66 4.46
256 257 4.077184 GACGCGGGTCCACATGGA 62.077 66.667 21.11 0.00 43.08 3.41
264 265 2.048597 TCCACATGGACGCACGTC 60.049 61.111 14.58 14.58 39.78 4.34
265 266 3.478394 CCACATGGACGCACGTCG 61.478 66.667 16.19 6.12 45.41 5.12
280 281 4.103103 TCGTCAGCGAGCGACTGG 62.103 66.667 14.35 0.00 42.81 4.00
287 288 2.668212 CGAGCGACTGGCCCAAAA 60.668 61.111 0.00 0.00 45.17 2.44
288 289 2.954611 GAGCGACTGGCCCAAAAC 59.045 61.111 0.00 0.00 45.17 2.43
289 290 1.896660 GAGCGACTGGCCCAAAACA 60.897 57.895 0.00 0.00 45.17 2.83
290 291 1.228552 AGCGACTGGCCCAAAACAT 60.229 52.632 0.00 0.00 45.17 2.71
291 292 0.037590 AGCGACTGGCCCAAAACATA 59.962 50.000 0.00 0.00 45.17 2.29
292 293 0.451783 GCGACTGGCCCAAAACATAG 59.548 55.000 0.00 0.00 34.80 2.23
293 294 0.451783 CGACTGGCCCAAAACATAGC 59.548 55.000 0.00 0.00 0.00 2.97
294 295 0.817654 GACTGGCCCAAAACATAGCC 59.182 55.000 0.00 0.00 45.96 3.93
296 297 3.206374 GGCCCAAAACATAGCCGG 58.794 61.111 0.00 0.00 35.30 6.13
297 298 1.680989 GGCCCAAAACATAGCCGGT 60.681 57.895 1.90 0.00 35.30 5.28
298 299 1.663379 GGCCCAAAACATAGCCGGTC 61.663 60.000 1.90 0.00 35.30 4.79
299 300 1.663379 GCCCAAAACATAGCCGGTCC 61.663 60.000 1.90 0.00 0.00 4.46
300 301 1.373590 CCCAAAACATAGCCGGTCCG 61.374 60.000 3.60 3.60 0.00 4.79
301 302 0.675522 CCAAAACATAGCCGGTCCGT 60.676 55.000 11.06 0.00 0.00 4.69
302 303 0.725117 CAAAACATAGCCGGTCCGTC 59.275 55.000 11.06 0.00 0.00 4.79
303 304 0.392060 AAAACATAGCCGGTCCGTCC 60.392 55.000 11.06 0.44 0.00 4.79
312 313 2.125793 GGTCCGTCCGGCTGTAAC 60.126 66.667 0.00 0.00 34.68 2.50
313 314 2.125793 GTCCGTCCGGCTGTAACC 60.126 66.667 0.00 0.00 34.68 2.85
314 315 2.601067 TCCGTCCGGCTGTAACCA 60.601 61.111 0.00 0.00 34.68 3.67
315 316 1.985662 TCCGTCCGGCTGTAACCAT 60.986 57.895 0.00 0.00 34.68 3.55
316 317 1.078708 CCGTCCGGCTGTAACCATT 60.079 57.895 0.00 0.00 0.00 3.16
317 318 0.675522 CCGTCCGGCTGTAACCATTT 60.676 55.000 0.00 0.00 0.00 2.32
318 319 0.725117 CGTCCGGCTGTAACCATTTC 59.275 55.000 0.00 0.00 0.00 2.17
319 320 1.092348 GTCCGGCTGTAACCATTTCC 58.908 55.000 0.00 0.00 0.00 3.13
320 321 0.034863 TCCGGCTGTAACCATTTCCC 60.035 55.000 0.00 0.00 0.00 3.97
321 322 0.034477 CCGGCTGTAACCATTTCCCT 60.034 55.000 0.00 0.00 0.00 4.20
322 323 1.615919 CCGGCTGTAACCATTTCCCTT 60.616 52.381 0.00 0.00 0.00 3.95
323 324 2.167662 CGGCTGTAACCATTTCCCTTT 58.832 47.619 0.00 0.00 0.00 3.11
324 325 3.349022 CGGCTGTAACCATTTCCCTTTA 58.651 45.455 0.00 0.00 0.00 1.85
325 326 3.951680 CGGCTGTAACCATTTCCCTTTAT 59.048 43.478 0.00 0.00 0.00 1.40
326 327 5.127491 CGGCTGTAACCATTTCCCTTTATA 58.873 41.667 0.00 0.00 0.00 0.98
340 341 5.082251 CCCTTTATAATAGAGGGGTACGC 57.918 47.826 11.60 0.29 45.27 4.42
422 424 4.072131 ACTGTTTTGTACCCATAGCACAG 58.928 43.478 0.00 0.00 37.11 3.66
439 584 4.685628 AGCACAGGCATTATTTCGTTTTTG 59.314 37.500 0.00 0.00 44.61 2.44
449 594 9.176181 GCATTATTTCGTTTTTGAGTTCACTTA 57.824 29.630 0.00 0.00 0.00 2.24
492 637 9.598517 TGACTTTCATGCTTTGAGTTTAAAAAT 57.401 25.926 0.00 0.00 35.27 1.82
495 640 9.853921 CTTTCATGCTTTGAGTTTAAAAATCAC 57.146 29.630 4.31 0.00 35.27 3.06
506 651 4.837896 TTAAAAATCACACCGTCATGCA 57.162 36.364 0.00 0.00 0.00 3.96
507 652 3.940209 AAAAATCACACCGTCATGCAT 57.060 38.095 0.00 0.00 0.00 3.96
524 669 4.025040 TGCATATAGCCAAAGATCCCAG 57.975 45.455 0.00 0.00 44.83 4.45
527 672 4.597004 CATATAGCCAAAGATCCCAGCAT 58.403 43.478 0.00 0.00 0.00 3.79
528 673 5.748402 CATATAGCCAAAGATCCCAGCATA 58.252 41.667 0.00 0.00 0.00 3.14
533 678 4.079787 AGCCAAAGATCCCAGCATAAGTAA 60.080 41.667 0.00 0.00 0.00 2.24
537 682 7.177392 GCCAAAGATCCCAGCATAAGTAATATT 59.823 37.037 0.00 0.00 0.00 1.28
546 695 6.417635 CCAGCATAAGTAATATTTTTGCACCG 59.582 38.462 11.84 2.61 35.72 4.94
605 754 3.546020 CGCAATACCATGAACCGAACATC 60.546 47.826 0.00 0.00 0.00 3.06
609 758 0.801872 CCATGAACCGAACATCGCAA 59.198 50.000 0.00 0.00 38.82 4.85
615 764 0.389296 ACCGAACATCGCAACATCGA 60.389 50.000 0.00 0.00 43.09 3.59
638 787 0.250858 CCATGCTTCGCCCATATCCA 60.251 55.000 0.00 0.00 0.00 3.41
645 794 1.118965 TCGCCCATATCCACGTCCAT 61.119 55.000 0.00 0.00 0.00 3.41
648 797 1.055849 CCCATATCCACGTCCATCCA 58.944 55.000 0.00 0.00 0.00 3.41
654 803 0.683179 TCCACGTCCATCCAGATCGT 60.683 55.000 0.00 0.00 35.12 3.73
655 804 0.249073 CCACGTCCATCCAGATCGTC 60.249 60.000 0.00 0.00 32.47 4.20
673 822 2.027385 GTCCTTCTTCCCATGCATTCC 58.973 52.381 0.00 0.00 0.00 3.01
675 824 1.063417 CCTTCTTCCCATGCATTCCCT 60.063 52.381 0.00 0.00 0.00 4.20
680 829 3.073503 TCTTCCCATGCATTCCCTAGATG 59.926 47.826 0.00 0.00 0.00 2.90
692 841 2.910977 TCCCTAGATGAGATGCATGCAT 59.089 45.455 32.66 32.66 37.34 3.96
694 843 3.010420 CCTAGATGAGATGCATGCATGG 58.990 50.000 36.73 23.72 37.34 3.66
695 844 2.658807 AGATGAGATGCATGCATGGT 57.341 45.000 36.73 23.29 37.34 3.55
722 871 4.471904 CTATAAATCATAGGCGGCTCCA 57.528 45.455 17.67 0.00 37.29 3.86
723 872 2.839486 TAAATCATAGGCGGCTCCAG 57.161 50.000 17.67 6.85 37.29 3.86
724 873 0.109342 AAATCATAGGCGGCTCCAGG 59.891 55.000 17.67 0.00 37.29 4.45
725 874 0.764369 AATCATAGGCGGCTCCAGGA 60.764 55.000 17.67 6.68 37.29 3.86
726 875 0.764369 ATCATAGGCGGCTCCAGGAA 60.764 55.000 17.67 0.00 37.29 3.36
727 876 0.764369 TCATAGGCGGCTCCAGGAAT 60.764 55.000 17.67 0.00 37.29 3.01
728 877 0.109342 CATAGGCGGCTCCAGGAATT 59.891 55.000 17.67 0.00 37.29 2.17
729 878 0.846693 ATAGGCGGCTCCAGGAATTT 59.153 50.000 17.67 0.00 37.29 1.82
730 879 0.107214 TAGGCGGCTCCAGGAATTTG 60.107 55.000 17.67 0.00 37.29 2.32
731 880 2.491621 GCGGCTCCAGGAATTTGC 59.508 61.111 0.00 0.00 0.00 3.68
732 881 2.342650 GCGGCTCCAGGAATTTGCA 61.343 57.895 1.09 0.00 0.00 4.08
733 882 1.876497 GCGGCTCCAGGAATTTGCAA 61.876 55.000 0.00 0.00 0.00 4.08
734 883 0.109132 CGGCTCCAGGAATTTGCAAC 60.109 55.000 0.00 0.00 0.00 4.17
735 884 0.247460 GGCTCCAGGAATTTGCAACC 59.753 55.000 0.00 0.00 0.00 3.77
736 885 0.109132 GCTCCAGGAATTTGCAACCG 60.109 55.000 0.00 0.00 0.00 4.44
737 886 0.527565 CTCCAGGAATTTGCAACCGG 59.472 55.000 0.00 0.00 0.00 5.28
738 887 0.897863 TCCAGGAATTTGCAACCGGG 60.898 55.000 15.02 15.02 39.67 5.73
739 888 1.184970 CCAGGAATTTGCAACCGGGT 61.185 55.000 6.32 0.00 35.05 5.28
740 889 1.540267 CAGGAATTTGCAACCGGGTA 58.460 50.000 6.32 0.00 0.00 3.69
741 890 2.099405 CAGGAATTTGCAACCGGGTAT 58.901 47.619 6.32 0.00 0.00 2.73
742 891 2.495669 CAGGAATTTGCAACCGGGTATT 59.504 45.455 6.32 0.00 0.00 1.89
743 892 2.758423 AGGAATTTGCAACCGGGTATTC 59.242 45.455 6.32 5.15 0.00 1.75
744 893 2.494073 GGAATTTGCAACCGGGTATTCA 59.506 45.455 17.14 6.83 0.00 2.57
745 894 3.132111 GGAATTTGCAACCGGGTATTCAT 59.868 43.478 17.14 0.00 0.00 2.57
746 895 4.339814 GGAATTTGCAACCGGGTATTCATA 59.660 41.667 17.14 5.72 0.00 2.15
747 896 5.010617 GGAATTTGCAACCGGGTATTCATAT 59.989 40.000 17.14 7.34 0.00 1.78
748 897 4.909696 TTTGCAACCGGGTATTCATATG 57.090 40.909 6.32 0.00 0.00 1.78
749 898 3.569194 TGCAACCGGGTATTCATATGT 57.431 42.857 6.32 0.00 0.00 2.29
750 899 4.691326 TGCAACCGGGTATTCATATGTA 57.309 40.909 6.32 0.00 0.00 2.29
751 900 5.235850 TGCAACCGGGTATTCATATGTAT 57.764 39.130 6.32 0.99 0.00 2.29
752 901 5.626142 TGCAACCGGGTATTCATATGTATT 58.374 37.500 6.32 0.00 0.00 1.89
753 902 5.703592 TGCAACCGGGTATTCATATGTATTC 59.296 40.000 6.32 0.00 0.00 1.75
754 903 5.703592 GCAACCGGGTATTCATATGTATTCA 59.296 40.000 6.32 0.00 0.00 2.57
755 904 6.374333 GCAACCGGGTATTCATATGTATTCAT 59.626 38.462 6.32 0.00 38.00 2.57
756 905 7.094377 GCAACCGGGTATTCATATGTATTCATT 60.094 37.037 6.32 0.00 35.70 2.57
757 906 8.792633 CAACCGGGTATTCATATGTATTCATTT 58.207 33.333 6.32 0.00 35.70 2.32
758 907 8.934023 ACCGGGTATTCATATGTATTCATTTT 57.066 30.769 6.32 0.00 35.70 1.82
759 908 8.792633 ACCGGGTATTCATATGTATTCATTTTG 58.207 33.333 6.32 0.00 35.70 2.44
760 909 7.754924 CCGGGTATTCATATGTATTCATTTTGC 59.245 37.037 1.90 0.00 35.70 3.68
761 910 7.754924 CGGGTATTCATATGTATTCATTTTGCC 59.245 37.037 1.90 0.00 35.70 4.52
762 911 8.584157 GGGTATTCATATGTATTCATTTTGCCA 58.416 33.333 1.90 0.00 35.70 4.92
763 912 9.979578 GGTATTCATATGTATTCATTTTGCCAA 57.020 29.630 1.90 0.00 35.70 4.52
772 921 8.618702 TGTATTCATTTTGCCAAAATCATTGT 57.381 26.923 12.34 1.36 38.97 2.71
773 922 8.504815 TGTATTCATTTTGCCAAAATCATTGTG 58.495 29.630 12.34 2.84 38.97 3.33
774 923 5.943706 TCATTTTGCCAAAATCATTGTGG 57.056 34.783 12.34 1.55 38.97 4.17
775 924 5.374921 TCATTTTGCCAAAATCATTGTGGT 58.625 33.333 12.34 0.00 38.97 4.16
776 925 5.826737 TCATTTTGCCAAAATCATTGTGGTT 59.173 32.000 12.34 0.00 38.97 3.67
777 926 6.320672 TCATTTTGCCAAAATCATTGTGGTTT 59.679 30.769 12.34 0.00 38.97 3.27
778 927 6.521151 TTTTGCCAAAATCATTGTGGTTTT 57.479 29.167 8.50 0.00 40.98 2.43
779 928 5.747951 TTGCCAAAATCATTGTGGTTTTC 57.252 34.783 8.50 0.00 38.51 2.29
780 929 5.033589 TGCCAAAATCATTGTGGTTTTCT 57.966 34.783 8.50 0.00 38.51 2.52
781 930 4.815308 TGCCAAAATCATTGTGGTTTTCTG 59.185 37.500 8.50 0.00 38.51 3.02
782 931 5.055812 GCCAAAATCATTGTGGTTTTCTGA 58.944 37.500 8.50 0.00 38.51 3.27
783 932 5.526846 GCCAAAATCATTGTGGTTTTCTGAA 59.473 36.000 8.50 0.00 38.51 3.02
784 933 6.038050 GCCAAAATCATTGTGGTTTTCTGAAA 59.962 34.615 8.50 0.00 38.51 2.69
785 934 7.414984 GCCAAAATCATTGTGGTTTTCTGAAAA 60.415 33.333 8.50 11.33 38.51 2.29
786 935 8.623030 CCAAAATCATTGTGGTTTTCTGAAAAT 58.377 29.630 17.63 0.00 38.51 1.82
789 938 8.735692 AATCATTGTGGTTTTCTGAAAATTGT 57.264 26.923 17.63 0.91 32.22 2.71
790 939 7.769272 TCATTGTGGTTTTCTGAAAATTGTC 57.231 32.000 17.63 5.87 32.22 3.18
791 940 7.326454 TCATTGTGGTTTTCTGAAAATTGTCA 58.674 30.769 17.63 11.92 32.22 3.58
792 941 6.959671 TTGTGGTTTTCTGAAAATTGTCAC 57.040 33.333 17.63 19.76 32.22 3.67
793 942 6.279513 TGTGGTTTTCTGAAAATTGTCACT 57.720 33.333 24.18 0.00 32.22 3.41
794 943 6.696411 TGTGGTTTTCTGAAAATTGTCACTT 58.304 32.000 24.18 0.00 32.22 3.16
795 944 7.158021 TGTGGTTTTCTGAAAATTGTCACTTT 58.842 30.769 24.18 0.00 32.22 2.66
796 945 7.659390 TGTGGTTTTCTGAAAATTGTCACTTTT 59.341 29.630 24.18 0.85 32.22 2.27
797 946 8.503196 GTGGTTTTCTGAAAATTGTCACTTTTT 58.497 29.630 17.63 0.00 32.22 1.94
849 998 9.471702 AAATCATGGGTATTCATATGAAGATCC 57.528 33.333 28.24 28.24 44.57 3.36
860 1009 9.956640 ATTCATATGAAGATCCAAGAATACTCC 57.043 33.333 21.97 0.00 37.48 3.85
861 1010 8.733092 TCATATGAAGATCCAAGAATACTCCT 57.267 34.615 1.98 0.00 0.00 3.69
862 1011 9.828691 TCATATGAAGATCCAAGAATACTCCTA 57.171 33.333 1.98 0.00 0.00 2.94
864 1013 9.836179 ATATGAAGATCCAAGAATACTCCTAGT 57.164 33.333 0.00 0.00 0.00 2.57
865 1014 7.353414 TGAAGATCCAAGAATACTCCTAGTG 57.647 40.000 0.00 0.00 0.00 2.74
866 1015 5.799827 AGATCCAAGAATACTCCTAGTGC 57.200 43.478 0.00 0.00 0.00 4.40
867 1016 4.591072 AGATCCAAGAATACTCCTAGTGCC 59.409 45.833 0.00 0.00 0.00 5.01
868 1017 2.693591 TCCAAGAATACTCCTAGTGCCG 59.306 50.000 0.00 0.00 0.00 5.69
869 1018 2.474816 CAAGAATACTCCTAGTGCCGC 58.525 52.381 0.00 0.00 0.00 6.53
870 1019 1.041437 AGAATACTCCTAGTGCCGCC 58.959 55.000 0.00 0.00 0.00 6.13
871 1020 0.033642 GAATACTCCTAGTGCCGCCC 59.966 60.000 0.00 0.00 0.00 6.13
872 1021 1.408453 AATACTCCTAGTGCCGCCCC 61.408 60.000 0.00 0.00 0.00 5.80
873 1022 2.313749 ATACTCCTAGTGCCGCCCCT 62.314 60.000 0.00 0.00 0.00 4.79
874 1023 3.854669 CTCCTAGTGCCGCCCCTG 61.855 72.222 0.00 0.00 0.00 4.45
927 1076 4.753662 CAGCCAGCCACCAGCCAT 62.754 66.667 0.00 0.00 45.47 4.40
943 1092 1.039068 CCATCTCACCATCTCGCTCT 58.961 55.000 0.00 0.00 0.00 4.09
946 1095 0.034089 TCTCACCATCTCGCTCTCCA 60.034 55.000 0.00 0.00 0.00 3.86
958 1107 0.829333 GCTCTCCAATCTCTGCTCCA 59.171 55.000 0.00 0.00 0.00 3.86
971 1120 2.037121 TCTGCTCCAAACACTTCGATCA 59.963 45.455 0.00 0.00 0.00 2.92
998 1152 1.288127 GGCCAAGCAAGCAAGTCAG 59.712 57.895 0.00 0.00 0.00 3.51
1007 1161 1.248785 AAGCAAGTCAGCATGGGCAG 61.249 55.000 0.00 0.00 44.61 4.85
1048 1202 3.558099 CTGTCGCTCGTCCTGTGCA 62.558 63.158 0.00 0.00 36.90 4.57
1053 1207 3.006756 GCTCGTCCTGTGCAGCCTA 62.007 63.158 0.00 0.00 37.06 3.93
1291 1445 3.869272 CCAAGTGCTGATCGCCGC 61.869 66.667 7.00 1.50 38.05 6.53
1292 1446 2.816958 CAAGTGCTGATCGCCGCT 60.817 61.111 7.00 0.66 38.05 5.52
1295 1449 3.121030 GTGCTGATCGCCGCTGTT 61.121 61.111 7.00 0.00 38.05 3.16
1328 1482 2.865119 TATACATCGACTCCGCCCTA 57.135 50.000 0.00 0.00 35.37 3.53
1341 1495 2.195683 CCCTATGTGGCCGGCATT 59.804 61.111 30.85 11.87 0.00 3.56
1343 1497 2.723746 CTATGTGGCCGGCATTGC 59.276 61.111 30.85 14.99 0.00 3.56
1387 1541 2.111756 CGGCGGTCTACGTAATGTAAC 58.888 52.381 0.00 0.00 46.52 2.50
1456 1610 3.323903 CGTGTGTGCGTGCGTGTA 61.324 61.111 0.00 0.00 0.00 2.90
1457 1611 2.244382 GTGTGTGCGTGCGTGTAC 59.756 61.111 0.00 0.00 0.00 2.90
1458 1612 3.323903 TGTGTGCGTGCGTGTACG 61.324 61.111 6.11 6.11 46.28 3.67
1459 1613 4.054455 GTGTGCGTGCGTGTACGG 62.054 66.667 12.20 0.00 43.87 4.02
1460 1614 4.572305 TGTGCGTGCGTGTACGGT 62.572 61.111 12.20 0.00 43.87 4.83
1461 1615 3.332409 GTGCGTGCGTGTACGGTT 61.332 61.111 12.20 0.00 43.87 4.44
1462 1616 3.331630 TGCGTGCGTGTACGGTTG 61.332 61.111 12.20 0.00 43.87 3.77
1463 1617 3.031457 GCGTGCGTGTACGGTTGA 61.031 61.111 12.20 0.00 43.87 3.18
1464 1618 2.995450 GCGTGCGTGTACGGTTGAG 61.995 63.158 12.20 0.00 43.87 3.02
1465 1619 1.659335 CGTGCGTGTACGGTTGAGT 60.659 57.895 6.55 0.00 40.22 3.41
1466 1620 1.602877 CGTGCGTGTACGGTTGAGTC 61.603 60.000 6.55 0.00 40.22 3.36
1467 1621 1.370778 TGCGTGTACGGTTGAGTCG 60.371 57.895 6.55 0.00 40.23 4.18
1468 1622 1.370900 GCGTGTACGGTTGAGTCGT 60.371 57.895 6.55 0.00 43.64 4.34
1469 1623 1.602877 GCGTGTACGGTTGAGTCGTG 61.603 60.000 6.55 0.00 41.24 4.35
1470 1624 1.000233 CGTGTACGGTTGAGTCGTGG 61.000 60.000 0.00 0.00 41.24 4.94
1471 1625 0.311790 GTGTACGGTTGAGTCGTGGA 59.688 55.000 0.00 0.00 41.24 4.02
1472 1626 0.311790 TGTACGGTTGAGTCGTGGAC 59.688 55.000 0.00 0.00 41.24 4.02
1473 1627 0.727122 GTACGGTTGAGTCGTGGACG 60.727 60.000 0.00 0.00 41.24 4.79
1474 1628 2.462255 TACGGTTGAGTCGTGGACGC 62.462 60.000 0.00 0.00 41.24 5.19
1475 1629 2.737376 GGTTGAGTCGTGGACGCC 60.737 66.667 0.00 0.00 37.67 5.68
1476 1630 2.338984 GTTGAGTCGTGGACGCCT 59.661 61.111 0.00 0.00 37.67 5.52
1477 1631 1.582968 GTTGAGTCGTGGACGCCTA 59.417 57.895 0.00 0.00 37.67 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.750657 CCTCCCACCTCATCAGCCC 61.751 68.421 0.00 0.00 0.00 5.19
1 2 2.750657 CCCTCCCACCTCATCAGCC 61.751 68.421 0.00 0.00 0.00 4.85
2 3 2.750657 CCCCTCCCACCTCATCAGC 61.751 68.421 0.00 0.00 0.00 4.26
3 4 2.074948 CCCCCTCCCACCTCATCAG 61.075 68.421 0.00 0.00 0.00 2.90
4 5 2.042762 CCCCCTCCCACCTCATCA 59.957 66.667 0.00 0.00 0.00 3.07
18 19 1.772156 CCCTCCATTCTCCTCCCCC 60.772 68.421 0.00 0.00 0.00 5.40
19 20 1.772156 CCCCTCCATTCTCCTCCCC 60.772 68.421 0.00 0.00 0.00 4.81
20 21 2.456443 GCCCCTCCATTCTCCTCCC 61.456 68.421 0.00 0.00 0.00 4.30
21 22 1.385206 AGCCCCTCCATTCTCCTCC 60.385 63.158 0.00 0.00 0.00 4.30
22 23 1.753368 CGAGCCCCTCCATTCTCCTC 61.753 65.000 0.00 0.00 0.00 3.71
23 24 1.764054 CGAGCCCCTCCATTCTCCT 60.764 63.158 0.00 0.00 0.00 3.69
24 25 2.066999 ACGAGCCCCTCCATTCTCC 61.067 63.158 0.00 0.00 0.00 3.71
25 26 1.144936 CACGAGCCCCTCCATTCTC 59.855 63.158 0.00 0.00 0.00 2.87
26 27 1.201429 AACACGAGCCCCTCCATTCT 61.201 55.000 0.00 0.00 0.00 2.40
27 28 1.026718 CAACACGAGCCCCTCCATTC 61.027 60.000 0.00 0.00 0.00 2.67
28 29 1.002134 CAACACGAGCCCCTCCATT 60.002 57.895 0.00 0.00 0.00 3.16
29 30 2.671070 CAACACGAGCCCCTCCAT 59.329 61.111 0.00 0.00 0.00 3.41
30 31 3.636231 CCAACACGAGCCCCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
31 32 1.335132 TATCCAACACGAGCCCCTCC 61.335 60.000 0.00 0.00 0.00 4.30
32 33 0.539986 TTATCCAACACGAGCCCCTC 59.460 55.000 0.00 0.00 0.00 4.30
33 34 0.541863 CTTATCCAACACGAGCCCCT 59.458 55.000 0.00 0.00 0.00 4.79
34 35 0.539986 TCTTATCCAACACGAGCCCC 59.460 55.000 0.00 0.00 0.00 5.80
35 36 1.480954 TCTCTTATCCAACACGAGCCC 59.519 52.381 0.00 0.00 0.00 5.19
36 37 2.961526 TCTCTTATCCAACACGAGCC 57.038 50.000 0.00 0.00 0.00 4.70
37 38 7.327275 CACTATAATCTCTTATCCAACACGAGC 59.673 40.741 0.00 0.00 0.00 5.03
38 39 7.810282 CCACTATAATCTCTTATCCAACACGAG 59.190 40.741 0.00 0.00 0.00 4.18
39 40 7.658261 CCACTATAATCTCTTATCCAACACGA 58.342 38.462 0.00 0.00 0.00 4.35
40 41 6.366332 GCCACTATAATCTCTTATCCAACACG 59.634 42.308 0.00 0.00 0.00 4.49
41 42 6.651225 GGCCACTATAATCTCTTATCCAACAC 59.349 42.308 0.00 0.00 0.00 3.32
42 43 6.328934 TGGCCACTATAATCTCTTATCCAACA 59.671 38.462 0.00 0.00 0.00 3.33
43 44 6.769512 TGGCCACTATAATCTCTTATCCAAC 58.230 40.000 0.00 0.00 0.00 3.77
44 45 6.013379 CCTGGCCACTATAATCTCTTATCCAA 60.013 42.308 0.00 0.00 0.00 3.53
45 46 5.485353 CCTGGCCACTATAATCTCTTATCCA 59.515 44.000 0.00 0.00 0.00 3.41
46 47 5.104735 CCCTGGCCACTATAATCTCTTATCC 60.105 48.000 0.00 0.00 0.00 2.59
47 48 5.721960 TCCCTGGCCACTATAATCTCTTATC 59.278 44.000 0.00 0.00 0.00 1.75
48 49 5.665701 TCCCTGGCCACTATAATCTCTTAT 58.334 41.667 0.00 0.00 0.00 1.73
49 50 5.087323 CTCCCTGGCCACTATAATCTCTTA 58.913 45.833 0.00 0.00 0.00 2.10
50 51 3.906846 CTCCCTGGCCACTATAATCTCTT 59.093 47.826 0.00 0.00 0.00 2.85
51 52 3.515562 CTCCCTGGCCACTATAATCTCT 58.484 50.000 0.00 0.00 0.00 3.10
52 53 2.027653 GCTCCCTGGCCACTATAATCTC 60.028 54.545 0.00 0.00 0.00 2.75
53 54 1.981495 GCTCCCTGGCCACTATAATCT 59.019 52.381 0.00 0.00 0.00 2.40
54 55 1.981495 AGCTCCCTGGCCACTATAATC 59.019 52.381 0.00 0.00 0.00 1.75
55 56 1.981495 GAGCTCCCTGGCCACTATAAT 59.019 52.381 0.00 0.00 0.00 1.28
56 57 1.424638 GAGCTCCCTGGCCACTATAA 58.575 55.000 0.00 0.00 0.00 0.98
57 58 0.827925 CGAGCTCCCTGGCCACTATA 60.828 60.000 0.00 0.00 0.00 1.31
58 59 2.136878 CGAGCTCCCTGGCCACTAT 61.137 63.158 0.00 0.00 0.00 2.12
59 60 2.759973 CGAGCTCCCTGGCCACTA 60.760 66.667 0.00 0.00 0.00 2.74
67 68 4.761058 TTCTCCGGCGAGCTCCCT 62.761 66.667 9.30 0.00 35.94 4.20
68 69 4.214327 CTTCTCCGGCGAGCTCCC 62.214 72.222 9.30 9.59 35.94 4.30
69 70 4.882396 GCTTCTCCGGCGAGCTCC 62.882 72.222 9.30 0.47 35.94 4.70
70 71 3.649277 TTGCTTCTCCGGCGAGCTC 62.649 63.158 17.43 2.73 37.32 4.09
71 72 3.655810 CTTGCTTCTCCGGCGAGCT 62.656 63.158 17.43 0.00 37.32 4.09
72 73 3.191539 CTTGCTTCTCCGGCGAGC 61.192 66.667 9.30 10.31 35.94 5.03
73 74 3.191539 GCTTGCTTCTCCGGCGAG 61.192 66.667 9.30 4.01 42.39 5.03
74 75 4.760047 GGCTTGCTTCTCCGGCGA 62.760 66.667 9.30 0.00 0.00 5.54
80 81 4.760047 TCCGCCGGCTTGCTTCTC 62.760 66.667 26.68 0.00 0.00 2.87
81 82 4.101448 ATCCGCCGGCTTGCTTCT 62.101 61.111 26.68 0.00 0.00 2.85
82 83 3.577313 GATCCGCCGGCTTGCTTC 61.577 66.667 26.68 10.27 0.00 3.86
90 91 3.610669 CTCTCCTGGATCCGCCGG 61.611 72.222 7.39 7.72 43.18 6.13
91 92 3.610669 CCTCTCCTGGATCCGCCG 61.611 72.222 7.39 0.00 40.66 6.46
92 93 2.444895 ACCTCTCCTGGATCCGCC 60.445 66.667 7.39 0.00 37.10 6.13
93 94 2.060980 ACACCTCTCCTGGATCCGC 61.061 63.158 7.39 0.00 0.00 5.54
94 95 1.819229 CACACCTCTCCTGGATCCG 59.181 63.158 7.39 1.76 0.00 4.18
95 96 1.524482 GCACACCTCTCCTGGATCC 59.476 63.158 4.20 4.20 0.00 3.36
96 97 1.524482 GGCACACCTCTCCTGGATC 59.476 63.158 0.00 0.00 0.00 3.36
97 98 1.997874 GGGCACACCTCTCCTGGAT 60.998 63.158 0.00 0.00 35.85 3.41
98 99 2.607750 GGGCACACCTCTCCTGGA 60.608 66.667 0.00 0.00 35.85 3.86
99 100 2.304056 ATGGGCACACCTCTCCTGG 61.304 63.158 0.00 0.00 41.11 4.45
100 101 1.077930 CATGGGCACACCTCTCCTG 60.078 63.158 0.00 0.00 41.11 3.86
101 102 2.304056 CCATGGGCACACCTCTCCT 61.304 63.158 2.85 0.00 41.11 3.69
102 103 2.273449 CCATGGGCACACCTCTCC 59.727 66.667 2.85 0.00 41.11 3.71
103 104 1.078143 GACCATGGGCACACCTCTC 60.078 63.158 14.59 0.00 41.11 3.20
104 105 2.959484 CGACCATGGGCACACCTCT 61.959 63.158 20.22 0.00 41.11 3.69
105 106 2.436646 CGACCATGGGCACACCTC 60.437 66.667 20.22 1.94 41.11 3.85
106 107 4.722700 GCGACCATGGGCACACCT 62.723 66.667 20.22 0.00 41.11 4.00
107 108 4.722700 AGCGACCATGGGCACACC 62.723 66.667 20.22 2.09 40.81 4.16
108 109 2.672996 AAGCGACCATGGGCACAC 60.673 61.111 20.22 6.24 0.00 3.82
109 110 2.672651 CAAGCGACCATGGGCACA 60.673 61.111 20.22 0.00 0.00 4.57
110 111 2.359850 TCAAGCGACCATGGGCAC 60.360 61.111 20.22 8.30 0.00 5.01
111 112 2.046023 CTCAAGCGACCATGGGCA 60.046 61.111 20.22 0.00 0.00 5.36
112 113 1.372087 CTTCTCAAGCGACCATGGGC 61.372 60.000 18.09 13.46 0.00 5.36
113 114 0.250234 TCTTCTCAAGCGACCATGGG 59.750 55.000 18.09 0.00 0.00 4.00
114 115 1.205655 TCTCTTCTCAAGCGACCATGG 59.794 52.381 11.19 11.19 0.00 3.66
115 116 2.165234 TCTCTCTTCTCAAGCGACCATG 59.835 50.000 0.00 0.00 0.00 3.66
116 117 2.451490 TCTCTCTTCTCAAGCGACCAT 58.549 47.619 0.00 0.00 0.00 3.55
117 118 1.911057 TCTCTCTTCTCAAGCGACCA 58.089 50.000 0.00 0.00 0.00 4.02
118 119 2.481104 CCATCTCTCTTCTCAAGCGACC 60.481 54.545 0.00 0.00 0.00 4.79
119 120 2.425312 TCCATCTCTCTTCTCAAGCGAC 59.575 50.000 0.00 0.00 0.00 5.19
120 121 2.687425 CTCCATCTCTCTTCTCAAGCGA 59.313 50.000 0.00 0.00 0.00 4.93
121 122 2.223782 CCTCCATCTCTCTTCTCAAGCG 60.224 54.545 0.00 0.00 0.00 4.68
122 123 3.030291 TCCTCCATCTCTCTTCTCAAGC 58.970 50.000 0.00 0.00 0.00 4.01
123 124 3.066621 CGTCCTCCATCTCTCTTCTCAAG 59.933 52.174 0.00 0.00 0.00 3.02
124 125 3.020274 CGTCCTCCATCTCTCTTCTCAA 58.980 50.000 0.00 0.00 0.00 3.02
125 126 2.239907 TCGTCCTCCATCTCTCTTCTCA 59.760 50.000 0.00 0.00 0.00 3.27
126 127 2.925724 TCGTCCTCCATCTCTCTTCTC 58.074 52.381 0.00 0.00 0.00 2.87
127 128 3.221771 CATCGTCCTCCATCTCTCTTCT 58.778 50.000 0.00 0.00 0.00 2.85
128 129 2.295909 CCATCGTCCTCCATCTCTCTTC 59.704 54.545 0.00 0.00 0.00 2.87
129 130 2.315176 CCATCGTCCTCCATCTCTCTT 58.685 52.381 0.00 0.00 0.00 2.85
130 131 1.480312 CCCATCGTCCTCCATCTCTCT 60.480 57.143 0.00 0.00 0.00 3.10
131 132 0.965439 CCCATCGTCCTCCATCTCTC 59.035 60.000 0.00 0.00 0.00 3.20
132 133 0.558220 TCCCATCGTCCTCCATCTCT 59.442 55.000 0.00 0.00 0.00 3.10
133 134 0.965439 CTCCCATCGTCCTCCATCTC 59.035 60.000 0.00 0.00 0.00 2.75
134 135 0.470833 CCTCCCATCGTCCTCCATCT 60.471 60.000 0.00 0.00 0.00 2.90
135 136 1.476007 CCCTCCCATCGTCCTCCATC 61.476 65.000 0.00 0.00 0.00 3.51
136 137 1.460305 CCCTCCCATCGTCCTCCAT 60.460 63.158 0.00 0.00 0.00 3.41
137 138 2.041922 CCCTCCCATCGTCCTCCA 60.042 66.667 0.00 0.00 0.00 3.86
138 139 1.834822 CTCCCTCCCATCGTCCTCC 60.835 68.421 0.00 0.00 0.00 4.30
139 140 0.397254 TTCTCCCTCCCATCGTCCTC 60.397 60.000 0.00 0.00 0.00 3.71
140 141 0.042731 TTTCTCCCTCCCATCGTCCT 59.957 55.000 0.00 0.00 0.00 3.85
141 142 0.909623 TTTTCTCCCTCCCATCGTCC 59.090 55.000 0.00 0.00 0.00 4.79
142 143 1.831736 TCTTTTCTCCCTCCCATCGTC 59.168 52.381 0.00 0.00 0.00 4.20
143 144 1.834263 CTCTTTTCTCCCTCCCATCGT 59.166 52.381 0.00 0.00 0.00 3.73
144 145 2.111384 TCTCTTTTCTCCCTCCCATCG 58.889 52.381 0.00 0.00 0.00 3.84
145 146 4.576330 TTTCTCTTTTCTCCCTCCCATC 57.424 45.455 0.00 0.00 0.00 3.51
146 147 5.339423 TTTTTCTCTTTTCTCCCTCCCAT 57.661 39.130 0.00 0.00 0.00 4.00
147 148 4.806952 TTTTTCTCTTTTCTCCCTCCCA 57.193 40.909 0.00 0.00 0.00 4.37
165 166 8.848474 TCTTATCTCTTCCTTTCATCGTTTTT 57.152 30.769 0.00 0.00 0.00 1.94
166 167 8.722394 GTTCTTATCTCTTCCTTTCATCGTTTT 58.278 33.333 0.00 0.00 0.00 2.43
167 168 7.063544 CGTTCTTATCTCTTCCTTTCATCGTTT 59.936 37.037 0.00 0.00 0.00 3.60
168 169 6.531948 CGTTCTTATCTCTTCCTTTCATCGTT 59.468 38.462 0.00 0.00 0.00 3.85
169 170 6.037098 CGTTCTTATCTCTTCCTTTCATCGT 58.963 40.000 0.00 0.00 0.00 3.73
170 171 6.266323 TCGTTCTTATCTCTTCCTTTCATCG 58.734 40.000 0.00 0.00 0.00 3.84
171 172 7.545965 TGTTCGTTCTTATCTCTTCCTTTCATC 59.454 37.037 0.00 0.00 0.00 2.92
172 173 7.386851 TGTTCGTTCTTATCTCTTCCTTTCAT 58.613 34.615 0.00 0.00 0.00 2.57
173 174 6.755206 TGTTCGTTCTTATCTCTTCCTTTCA 58.245 36.000 0.00 0.00 0.00 2.69
174 175 7.653767 TTGTTCGTTCTTATCTCTTCCTTTC 57.346 36.000 0.00 0.00 0.00 2.62
175 176 7.931948 TCTTTGTTCGTTCTTATCTCTTCCTTT 59.068 33.333 0.00 0.00 0.00 3.11
176 177 7.442656 TCTTTGTTCGTTCTTATCTCTTCCTT 58.557 34.615 0.00 0.00 0.00 3.36
177 178 6.994221 TCTTTGTTCGTTCTTATCTCTTCCT 58.006 36.000 0.00 0.00 0.00 3.36
178 179 7.835634 ATCTTTGTTCGTTCTTATCTCTTCC 57.164 36.000 0.00 0.00 0.00 3.46
184 185 9.922305 CCATTCTTATCTTTGTTCGTTCTTATC 57.078 33.333 0.00 0.00 0.00 1.75
185 186 9.667107 TCCATTCTTATCTTTGTTCGTTCTTAT 57.333 29.630 0.00 0.00 0.00 1.73
186 187 9.496873 TTCCATTCTTATCTTTGTTCGTTCTTA 57.503 29.630 0.00 0.00 0.00 2.10
187 188 7.979444 TCCATTCTTATCTTTGTTCGTTCTT 57.021 32.000 0.00 0.00 0.00 2.52
188 189 7.361286 GCTTCCATTCTTATCTTTGTTCGTTCT 60.361 37.037 0.00 0.00 0.00 3.01
189 190 6.743172 GCTTCCATTCTTATCTTTGTTCGTTC 59.257 38.462 0.00 0.00 0.00 3.95
190 191 6.206634 TGCTTCCATTCTTATCTTTGTTCGTT 59.793 34.615 0.00 0.00 0.00 3.85
191 192 5.705441 TGCTTCCATTCTTATCTTTGTTCGT 59.295 36.000 0.00 0.00 0.00 3.85
192 193 6.092670 TCTGCTTCCATTCTTATCTTTGTTCG 59.907 38.462 0.00 0.00 0.00 3.95
193 194 7.335422 TCTCTGCTTCCATTCTTATCTTTGTTC 59.665 37.037 0.00 0.00 0.00 3.18
194 195 7.170965 TCTCTGCTTCCATTCTTATCTTTGTT 58.829 34.615 0.00 0.00 0.00 2.83
195 196 6.715280 TCTCTGCTTCCATTCTTATCTTTGT 58.285 36.000 0.00 0.00 0.00 2.83
196 197 7.046652 TCTCTCTGCTTCCATTCTTATCTTTG 58.953 38.462 0.00 0.00 0.00 2.77
197 198 7.192852 TCTCTCTGCTTCCATTCTTATCTTT 57.807 36.000 0.00 0.00 0.00 2.52
198 199 6.805016 TCTCTCTGCTTCCATTCTTATCTT 57.195 37.500 0.00 0.00 0.00 2.40
199 200 6.610830 TCTTCTCTCTGCTTCCATTCTTATCT 59.389 38.462 0.00 0.00 0.00 1.98
200 201 6.815089 TCTTCTCTCTGCTTCCATTCTTATC 58.185 40.000 0.00 0.00 0.00 1.75
201 202 6.805016 TCTTCTCTCTGCTTCCATTCTTAT 57.195 37.500 0.00 0.00 0.00 1.73
202 203 6.805016 ATCTTCTCTCTGCTTCCATTCTTA 57.195 37.500 0.00 0.00 0.00 2.10
203 204 5.697082 ATCTTCTCTCTGCTTCCATTCTT 57.303 39.130 0.00 0.00 0.00 2.52
204 205 5.221224 CGTATCTTCTCTCTGCTTCCATTCT 60.221 44.000 0.00 0.00 0.00 2.40
205 206 4.981674 CGTATCTTCTCTCTGCTTCCATTC 59.018 45.833 0.00 0.00 0.00 2.67
206 207 4.404073 ACGTATCTTCTCTCTGCTTCCATT 59.596 41.667 0.00 0.00 0.00 3.16
207 208 3.957497 ACGTATCTTCTCTCTGCTTCCAT 59.043 43.478 0.00 0.00 0.00 3.41
208 209 3.129462 CACGTATCTTCTCTCTGCTTCCA 59.871 47.826 0.00 0.00 0.00 3.53
209 210 3.490078 CCACGTATCTTCTCTCTGCTTCC 60.490 52.174 0.00 0.00 0.00 3.46
210 211 3.701241 CCACGTATCTTCTCTCTGCTTC 58.299 50.000 0.00 0.00 0.00 3.86
211 212 2.159170 GCCACGTATCTTCTCTCTGCTT 60.159 50.000 0.00 0.00 0.00 3.91
212 213 1.407258 GCCACGTATCTTCTCTCTGCT 59.593 52.381 0.00 0.00 0.00 4.24
213 214 1.135139 TGCCACGTATCTTCTCTCTGC 59.865 52.381 0.00 0.00 0.00 4.26
214 215 3.510388 TTGCCACGTATCTTCTCTCTG 57.490 47.619 0.00 0.00 0.00 3.35
215 216 4.537135 TTTTGCCACGTATCTTCTCTCT 57.463 40.909 0.00 0.00 0.00 3.10
216 217 4.034510 CCATTTTGCCACGTATCTTCTCTC 59.965 45.833 0.00 0.00 0.00 3.20
217 218 3.941483 CCATTTTGCCACGTATCTTCTCT 59.059 43.478 0.00 0.00 0.00 3.10
218 219 3.938963 TCCATTTTGCCACGTATCTTCTC 59.061 43.478 0.00 0.00 0.00 2.87
219 220 3.689649 GTCCATTTTGCCACGTATCTTCT 59.310 43.478 0.00 0.00 0.00 2.85
220 221 3.485216 CGTCCATTTTGCCACGTATCTTC 60.485 47.826 0.00 0.00 0.00 2.87
221 222 2.418628 CGTCCATTTTGCCACGTATCTT 59.581 45.455 0.00 0.00 0.00 2.40
222 223 2.006888 CGTCCATTTTGCCACGTATCT 58.993 47.619 0.00 0.00 0.00 1.98
223 224 1.531058 GCGTCCATTTTGCCACGTATC 60.531 52.381 0.00 0.00 34.69 2.24
224 225 0.450184 GCGTCCATTTTGCCACGTAT 59.550 50.000 0.00 0.00 34.69 3.06
225 226 1.870383 GCGTCCATTTTGCCACGTA 59.130 52.632 0.00 0.00 34.69 3.57
226 227 2.642700 GCGTCCATTTTGCCACGT 59.357 55.556 0.00 0.00 34.69 4.49
227 228 2.501650 CGCGTCCATTTTGCCACG 60.502 61.111 0.00 0.00 35.32 4.94
228 229 2.126502 CCGCGTCCATTTTGCCAC 60.127 61.111 4.92 0.00 0.00 5.01
229 230 3.369400 CCCGCGTCCATTTTGCCA 61.369 61.111 4.92 0.00 0.00 4.92
230 231 3.336715 GACCCGCGTCCATTTTGCC 62.337 63.158 4.92 0.00 32.40 4.52
231 232 2.178273 GACCCGCGTCCATTTTGC 59.822 61.111 4.92 0.00 32.40 3.68
239 240 4.077184 TCCATGTGGACCCGCGTC 62.077 66.667 4.92 0.00 39.78 5.19
247 248 2.048597 GACGTGCGTCCATGTGGA 60.049 61.111 13.11 0.00 41.15 4.02
248 249 3.478394 CGACGTGCGTCCATGTGG 61.478 66.667 17.47 0.00 41.15 4.17
259 260 4.736631 TCGCTCGCTGACGACGTG 62.737 66.667 4.58 0.00 45.12 4.49
270 271 2.668212 TTTTGGGCCAGTCGCTCG 60.668 61.111 6.23 0.00 43.05 5.03
271 272 1.244019 ATGTTTTGGGCCAGTCGCTC 61.244 55.000 6.23 0.00 39.08 5.03
272 273 0.037590 TATGTTTTGGGCCAGTCGCT 59.962 50.000 6.23 0.00 37.74 4.93
273 274 0.451783 CTATGTTTTGGGCCAGTCGC 59.548 55.000 6.23 0.00 0.00 5.19
274 275 0.451783 GCTATGTTTTGGGCCAGTCG 59.548 55.000 6.23 0.00 0.00 4.18
275 276 0.817654 GGCTATGTTTTGGGCCAGTC 59.182 55.000 6.23 1.84 43.59 3.51
276 277 0.965363 CGGCTATGTTTTGGGCCAGT 60.965 55.000 6.23 0.00 44.27 4.00
277 278 1.666209 CCGGCTATGTTTTGGGCCAG 61.666 60.000 6.23 0.00 44.27 4.85
278 279 1.680651 CCGGCTATGTTTTGGGCCA 60.681 57.895 0.00 0.00 44.27 5.36
279 280 1.663379 GACCGGCTATGTTTTGGGCC 61.663 60.000 0.00 0.00 41.02 5.80
280 281 1.663379 GGACCGGCTATGTTTTGGGC 61.663 60.000 0.00 0.00 0.00 5.36
281 282 1.373590 CGGACCGGCTATGTTTTGGG 61.374 60.000 5.81 0.00 0.00 4.12
282 283 0.675522 ACGGACCGGCTATGTTTTGG 60.676 55.000 20.00 0.00 0.00 3.28
283 284 0.725117 GACGGACCGGCTATGTTTTG 59.275 55.000 20.00 0.00 0.00 2.44
284 285 0.392060 GGACGGACCGGCTATGTTTT 60.392 55.000 21.47 0.00 34.07 2.43
285 286 1.219935 GGACGGACCGGCTATGTTT 59.780 57.895 21.47 0.00 34.07 2.83
286 287 2.897972 GGACGGACCGGCTATGTT 59.102 61.111 21.47 0.00 34.07 2.71
295 296 2.125793 GTTACAGCCGGACGGACC 60.126 66.667 15.99 0.00 37.50 4.46
296 297 2.125793 GGTTACAGCCGGACGGAC 60.126 66.667 15.99 6.01 37.50 4.79
297 298 1.546589 AATGGTTACAGCCGGACGGA 61.547 55.000 15.99 0.00 37.50 4.69
298 299 0.675522 AAATGGTTACAGCCGGACGG 60.676 55.000 5.05 6.35 38.57 4.79
299 300 0.725117 GAAATGGTTACAGCCGGACG 59.275 55.000 5.05 0.00 0.00 4.79
300 301 1.092348 GGAAATGGTTACAGCCGGAC 58.908 55.000 5.05 0.00 0.00 4.79
301 302 0.034863 GGGAAATGGTTACAGCCGGA 60.035 55.000 5.05 0.00 0.00 5.14
302 303 0.034477 AGGGAAATGGTTACAGCCGG 60.034 55.000 0.00 0.00 0.00 6.13
303 304 1.834188 AAGGGAAATGGTTACAGCCG 58.166 50.000 0.00 0.00 0.00 5.52
304 305 7.597288 ATTATAAAGGGAAATGGTTACAGCC 57.403 36.000 0.00 0.00 0.00 4.85
305 306 9.569122 TCTATTATAAAGGGAAATGGTTACAGC 57.431 33.333 0.00 0.00 0.00 4.40
319 320 4.219288 ACGCGTACCCCTCTATTATAAAGG 59.781 45.833 11.67 0.00 0.00 3.11
320 321 5.382618 ACGCGTACCCCTCTATTATAAAG 57.617 43.478 11.67 0.00 0.00 1.85
321 322 4.218417 GGACGCGTACCCCTCTATTATAAA 59.782 45.833 13.97 0.00 0.00 1.40
322 323 3.758554 GGACGCGTACCCCTCTATTATAA 59.241 47.826 13.97 0.00 0.00 0.98
323 324 3.347216 GGACGCGTACCCCTCTATTATA 58.653 50.000 13.97 0.00 0.00 0.98
324 325 2.165998 GGACGCGTACCCCTCTATTAT 58.834 52.381 13.97 0.00 0.00 1.28
325 326 1.609208 GGACGCGTACCCCTCTATTA 58.391 55.000 13.97 0.00 0.00 0.98
326 327 1.450531 CGGACGCGTACCCCTCTATT 61.451 60.000 17.51 0.00 0.00 1.73
354 356 7.429920 CACAAATTTTGAATTCAAACTTGGCAG 59.570 33.333 32.97 25.24 44.56 4.85
388 390 7.338703 TGGGTACAAAACAGTAATGTAACACAA 59.661 33.333 13.14 0.19 38.65 3.33
422 424 6.640907 AGTGAACTCAAAAACGAAATAATGCC 59.359 34.615 0.00 0.00 0.00 4.40
439 584 9.561270 GCAATAGGAAAAGAAATAAGTGAACTC 57.439 33.333 0.00 0.00 0.00 3.01
449 594 8.181904 TGAAAGTCAGCAATAGGAAAAGAAAT 57.818 30.769 0.00 0.00 0.00 2.17
454 599 5.477984 AGCATGAAAGTCAGCAATAGGAAAA 59.522 36.000 0.00 0.00 0.00 2.29
460 605 5.474532 ACTCAAAGCATGAAAGTCAGCAATA 59.525 36.000 0.00 0.00 37.67 1.90
492 637 2.547855 GGCTATATGCATGACGGTGTGA 60.548 50.000 10.16 0.00 45.15 3.58
495 640 2.168326 TGGCTATATGCATGACGGTG 57.832 50.000 10.16 0.00 45.15 4.94
506 651 4.942363 ATGCTGGGATCTTTGGCTATAT 57.058 40.909 0.00 0.00 0.00 0.86
507 652 5.310594 ACTTATGCTGGGATCTTTGGCTATA 59.689 40.000 0.00 0.00 0.00 1.31
524 669 6.750039 ACACGGTGCAAAAATATTACTTATGC 59.250 34.615 8.30 0.00 0.00 3.14
527 672 6.127952 GGGACACGGTGCAAAAATATTACTTA 60.128 38.462 8.30 0.00 0.00 2.24
528 673 5.336134 GGGACACGGTGCAAAAATATTACTT 60.336 40.000 8.30 0.00 0.00 2.24
533 678 1.470890 CGGGACACGGTGCAAAAATAT 59.529 47.619 8.30 0.00 39.42 1.28
605 754 1.009335 CATGGGCATCGATGTTGCG 60.009 57.895 25.47 8.19 41.07 4.85
609 758 2.711711 GAAGCATGGGCATCGATGT 58.288 52.632 25.47 3.76 44.61 3.06
638 787 0.395862 AGGACGATCTGGATGGACGT 60.396 55.000 0.00 0.00 39.82 4.34
645 794 1.273041 TGGGAAGAAGGACGATCTGGA 60.273 52.381 0.00 0.00 0.00 3.86
648 797 1.139853 GCATGGGAAGAAGGACGATCT 59.860 52.381 0.00 0.00 0.00 2.75
654 803 1.063717 GGGAATGCATGGGAAGAAGGA 60.064 52.381 0.00 0.00 0.00 3.36
655 804 1.063417 AGGGAATGCATGGGAAGAAGG 60.063 52.381 0.00 0.00 0.00 3.46
673 822 3.010420 CCATGCATGCATCTCATCTAGG 58.990 50.000 30.07 20.60 33.90 3.02
675 824 3.782656 ACCATGCATGCATCTCATCTA 57.217 42.857 30.07 0.00 33.90 1.98
680 829 1.266175 GCTGTACCATGCATGCATCTC 59.734 52.381 30.07 18.95 33.90 2.75
701 850 4.437239 CTGGAGCCGCCTATGATTTATAG 58.563 47.826 0.00 0.00 38.80 1.31
702 851 3.197766 CCTGGAGCCGCCTATGATTTATA 59.802 47.826 0.00 0.00 37.63 0.98
703 852 2.026822 CCTGGAGCCGCCTATGATTTAT 60.027 50.000 0.00 0.00 37.63 1.40
704 853 1.347707 CCTGGAGCCGCCTATGATTTA 59.652 52.381 0.00 0.00 37.63 1.40
705 854 0.109342 CCTGGAGCCGCCTATGATTT 59.891 55.000 0.00 0.00 37.63 2.17
706 855 0.764369 TCCTGGAGCCGCCTATGATT 60.764 55.000 0.00 0.00 37.63 2.57
707 856 0.764369 TTCCTGGAGCCGCCTATGAT 60.764 55.000 0.00 0.00 37.63 2.45
708 857 0.764369 ATTCCTGGAGCCGCCTATGA 60.764 55.000 0.00 0.00 37.63 2.15
709 858 0.109342 AATTCCTGGAGCCGCCTATG 59.891 55.000 0.00 0.00 37.63 2.23
710 859 0.846693 AAATTCCTGGAGCCGCCTAT 59.153 50.000 0.00 0.00 37.63 2.57
711 860 0.107214 CAAATTCCTGGAGCCGCCTA 60.107 55.000 0.00 0.00 37.63 3.93
712 861 1.379044 CAAATTCCTGGAGCCGCCT 60.379 57.895 0.00 0.00 37.63 5.52
713 862 3.068729 GCAAATTCCTGGAGCCGCC 62.069 63.158 0.00 0.00 37.10 6.13
714 863 1.876497 TTGCAAATTCCTGGAGCCGC 61.876 55.000 0.00 0.00 0.00 6.53
715 864 0.109132 GTTGCAAATTCCTGGAGCCG 60.109 55.000 0.00 0.00 0.00 5.52
716 865 0.247460 GGTTGCAAATTCCTGGAGCC 59.753 55.000 0.00 0.00 31.24 4.70
717 866 0.109132 CGGTTGCAAATTCCTGGAGC 60.109 55.000 0.00 0.00 0.00 4.70
718 867 0.527565 CCGGTTGCAAATTCCTGGAG 59.472 55.000 0.00 0.00 0.00 3.86
719 868 0.897863 CCCGGTTGCAAATTCCTGGA 60.898 55.000 12.96 0.00 0.00 3.86
720 869 1.184970 ACCCGGTTGCAAATTCCTGG 61.185 55.000 11.91 11.91 0.00 4.45
721 870 1.540267 TACCCGGTTGCAAATTCCTG 58.460 50.000 0.00 0.00 0.00 3.86
722 871 2.525105 ATACCCGGTTGCAAATTCCT 57.475 45.000 0.00 0.00 0.00 3.36
723 872 2.494073 TGAATACCCGGTTGCAAATTCC 59.506 45.455 13.88 5.82 0.00 3.01
724 873 3.859411 TGAATACCCGGTTGCAAATTC 57.141 42.857 0.00 6.52 0.00 2.17
725 874 5.362430 ACATATGAATACCCGGTTGCAAATT 59.638 36.000 10.38 0.00 0.00 1.82
726 875 4.892934 ACATATGAATACCCGGTTGCAAAT 59.107 37.500 10.38 0.00 0.00 2.32
727 876 4.274147 ACATATGAATACCCGGTTGCAAA 58.726 39.130 10.38 0.00 0.00 3.68
728 877 3.892284 ACATATGAATACCCGGTTGCAA 58.108 40.909 10.38 0.00 0.00 4.08
729 878 3.569194 ACATATGAATACCCGGTTGCA 57.431 42.857 10.38 0.00 0.00 4.08
730 879 5.703592 TGAATACATATGAATACCCGGTTGC 59.296 40.000 10.38 0.00 0.00 4.17
731 880 7.921786 ATGAATACATATGAATACCCGGTTG 57.078 36.000 10.38 0.00 34.71 3.77
732 881 8.934023 AAATGAATACATATGAATACCCGGTT 57.066 30.769 10.38 0.00 35.50 4.44
733 882 8.792633 CAAAATGAATACATATGAATACCCGGT 58.207 33.333 10.38 0.00 35.50 5.28
734 883 7.754924 GCAAAATGAATACATATGAATACCCGG 59.245 37.037 10.38 0.00 35.50 5.73
735 884 7.754924 GGCAAAATGAATACATATGAATACCCG 59.245 37.037 10.38 0.00 35.50 5.28
736 885 8.584157 TGGCAAAATGAATACATATGAATACCC 58.416 33.333 10.38 0.00 35.50 3.69
737 886 9.979578 TTGGCAAAATGAATACATATGAATACC 57.020 29.630 10.38 0.00 35.50 2.73
746 895 9.233649 ACAATGATTTTGGCAAAATGAATACAT 57.766 25.926 35.49 27.65 40.97 2.29
747 896 8.504815 CACAATGATTTTGGCAAAATGAATACA 58.495 29.630 35.49 26.89 40.97 2.29
748 897 7.964011 CCACAATGATTTTGGCAAAATGAATAC 59.036 33.333 35.49 23.04 40.97 1.89
749 898 7.664731 ACCACAATGATTTTGGCAAAATGAATA 59.335 29.630 35.49 21.22 40.97 1.75
750 899 6.490721 ACCACAATGATTTTGGCAAAATGAAT 59.509 30.769 35.49 25.87 40.97 2.57
751 900 5.826737 ACCACAATGATTTTGGCAAAATGAA 59.173 32.000 35.49 25.01 40.97 2.57
752 901 5.374921 ACCACAATGATTTTGGCAAAATGA 58.625 33.333 35.49 29.60 40.97 2.57
753 902 5.692613 ACCACAATGATTTTGGCAAAATG 57.307 34.783 35.49 26.16 40.97 2.32
754 903 6.712179 AAACCACAATGATTTTGGCAAAAT 57.288 29.167 32.12 32.12 43.43 1.82
755 904 6.376581 AGAAAACCACAATGATTTTGGCAAAA 59.623 30.769 25.94 25.94 33.25 2.44
756 905 5.884792 AGAAAACCACAATGATTTTGGCAAA 59.115 32.000 8.93 8.93 33.25 3.68
757 906 5.296283 CAGAAAACCACAATGATTTTGGCAA 59.704 36.000 10.13 0.00 33.25 4.52
758 907 4.815308 CAGAAAACCACAATGATTTTGGCA 59.185 37.500 10.13 0.00 33.25 4.92
759 908 5.055812 TCAGAAAACCACAATGATTTTGGC 58.944 37.500 10.13 0.00 33.25 4.52
760 909 7.551035 TTTCAGAAAACCACAATGATTTTGG 57.449 32.000 8.73 8.73 36.39 3.28
763 912 9.176460 ACAATTTTCAGAAAACCACAATGATTT 57.824 25.926 10.62 0.00 32.37 2.17
764 913 8.735692 ACAATTTTCAGAAAACCACAATGATT 57.264 26.923 10.62 0.00 32.37 2.57
765 914 7.986320 TGACAATTTTCAGAAAACCACAATGAT 59.014 29.630 10.62 0.00 32.37 2.45
766 915 7.277539 GTGACAATTTTCAGAAAACCACAATGA 59.722 33.333 10.62 0.00 32.37 2.57
767 916 7.278424 AGTGACAATTTTCAGAAAACCACAATG 59.722 33.333 21.60 13.37 32.37 2.82
768 917 7.330262 AGTGACAATTTTCAGAAAACCACAAT 58.670 30.769 21.60 13.28 32.37 2.71
769 918 6.696411 AGTGACAATTTTCAGAAAACCACAA 58.304 32.000 21.60 6.57 32.37 3.33
770 919 6.279513 AGTGACAATTTTCAGAAAACCACA 57.720 33.333 21.60 13.80 32.37 4.17
771 920 7.595311 AAAGTGACAATTTTCAGAAAACCAC 57.405 32.000 10.62 14.48 32.37 4.16
772 921 8.614469 AAAAAGTGACAATTTTCAGAAAACCA 57.386 26.923 13.47 4.51 32.37 3.67
823 972 9.471702 GGATCTTCATATGAATACCCATGATTT 57.528 33.333 18.26 0.00 33.01 2.17
824 973 8.617491 TGGATCTTCATATGAATACCCATGATT 58.383 33.333 18.26 2.15 33.01 2.57
825 974 8.166479 TGGATCTTCATATGAATACCCATGAT 57.834 34.615 18.26 14.48 33.01 2.45
826 975 7.572546 TGGATCTTCATATGAATACCCATGA 57.427 36.000 18.26 10.57 33.01 3.07
827 976 8.105197 TCTTGGATCTTCATATGAATACCCATG 58.895 37.037 15.77 16.87 33.01 3.66
828 977 8.223378 TCTTGGATCTTCATATGAATACCCAT 57.777 34.615 15.77 5.93 33.01 4.00
829 978 7.631510 TCTTGGATCTTCATATGAATACCCA 57.368 36.000 18.26 14.92 33.01 4.51
834 983 9.956640 GGAGTATTCTTGGATCTTCATATGAAT 57.043 33.333 18.26 4.93 33.01 2.57
835 984 9.163894 AGGAGTATTCTTGGATCTTCATATGAA 57.836 33.333 17.07 17.07 0.00 2.57
836 985 8.733092 AGGAGTATTCTTGGATCTTCATATGA 57.267 34.615 0.00 0.00 0.00 2.15
838 987 9.836179 ACTAGGAGTATTCTTGGATCTTCATAT 57.164 33.333 0.00 0.00 0.00 1.78
839 988 9.083422 CACTAGGAGTATTCTTGGATCTTCATA 57.917 37.037 0.00 0.00 0.00 2.15
840 989 7.472663 GCACTAGGAGTATTCTTGGATCTTCAT 60.473 40.741 0.00 0.00 0.00 2.57
841 990 6.183360 GCACTAGGAGTATTCTTGGATCTTCA 60.183 42.308 0.00 0.00 0.00 3.02
842 991 6.220201 GCACTAGGAGTATTCTTGGATCTTC 58.780 44.000 0.00 0.00 0.00 2.87
843 992 5.071115 GGCACTAGGAGTATTCTTGGATCTT 59.929 44.000 0.00 0.00 0.00 2.40
844 993 4.591072 GGCACTAGGAGTATTCTTGGATCT 59.409 45.833 0.00 0.00 0.00 2.75
845 994 4.559704 CGGCACTAGGAGTATTCTTGGATC 60.560 50.000 0.00 0.00 0.00 3.36
846 995 3.322254 CGGCACTAGGAGTATTCTTGGAT 59.678 47.826 0.00 0.00 0.00 3.41
847 996 2.693591 CGGCACTAGGAGTATTCTTGGA 59.306 50.000 0.00 0.00 0.00 3.53
848 997 2.803492 GCGGCACTAGGAGTATTCTTGG 60.803 54.545 0.00 0.00 0.00 3.61
849 998 2.474816 GCGGCACTAGGAGTATTCTTG 58.525 52.381 0.00 0.00 0.00 3.02
850 999 1.413077 GGCGGCACTAGGAGTATTCTT 59.587 52.381 3.07 0.00 0.00 2.52
851 1000 1.041437 GGCGGCACTAGGAGTATTCT 58.959 55.000 3.07 0.00 0.00 2.40
852 1001 0.033642 GGGCGGCACTAGGAGTATTC 59.966 60.000 12.47 0.00 0.00 1.75
853 1002 1.408453 GGGGCGGCACTAGGAGTATT 61.408 60.000 12.47 0.00 0.00 1.89
854 1003 1.837499 GGGGCGGCACTAGGAGTAT 60.837 63.158 12.47 0.00 0.00 2.12
855 1004 2.443390 GGGGCGGCACTAGGAGTA 60.443 66.667 12.47 0.00 0.00 2.59
856 1005 4.400251 AGGGGCGGCACTAGGAGT 62.400 66.667 14.26 0.00 0.00 3.85
857 1006 3.854669 CAGGGGCGGCACTAGGAG 61.855 72.222 15.79 0.00 0.00 3.69
868 1017 3.009473 TGATCCTCATTTATAGCAGGGGC 59.991 47.826 0.00 0.00 41.61 5.80
869 1018 4.916041 TGATCCTCATTTATAGCAGGGG 57.084 45.455 0.00 0.00 0.00 4.79
870 1019 5.474876 GGTTTGATCCTCATTTATAGCAGGG 59.525 44.000 0.00 0.00 0.00 4.45
871 1020 5.474876 GGGTTTGATCCTCATTTATAGCAGG 59.525 44.000 0.00 0.00 0.00 4.85
872 1021 5.180117 CGGGTTTGATCCTCATTTATAGCAG 59.820 44.000 0.00 0.00 0.00 4.24
873 1022 5.063204 CGGGTTTGATCCTCATTTATAGCA 58.937 41.667 0.00 0.00 0.00 3.49
874 1023 4.083271 GCGGGTTTGATCCTCATTTATAGC 60.083 45.833 0.00 0.00 0.00 2.97
927 1076 0.034089 TGGAGAGCGAGATGGTGAGA 60.034 55.000 0.00 0.00 0.00 3.27
943 1092 2.373169 AGTGTTTGGAGCAGAGATTGGA 59.627 45.455 0.00 0.00 0.00 3.53
946 1095 3.070018 CGAAGTGTTTGGAGCAGAGATT 58.930 45.455 0.00 0.00 0.00 2.40
958 1107 2.616842 GGTGTTGGTGATCGAAGTGTTT 59.383 45.455 0.00 0.00 0.00 2.83
971 1120 4.514585 TGCTTGGCCGGTGTTGGT 62.515 61.111 1.90 0.00 0.00 3.67
998 1152 2.263540 CCTTGTTGCTGCCCATGC 59.736 61.111 0.00 0.00 38.26 4.06
1033 1187 4.724602 GCTGCACAGGACGAGCGA 62.725 66.667 0.00 0.00 33.26 4.93
1048 1202 4.493747 GTTCGCGGCGAGTAGGCT 62.494 66.667 25.02 0.00 44.22 4.58
1307 1461 1.819288 AGGGCGGAGTCGATGTATATG 59.181 52.381 0.00 0.00 39.00 1.78
1313 1467 0.319040 CACATAGGGCGGAGTCGATG 60.319 60.000 0.00 0.00 39.00 3.84
1387 1541 4.204978 GTCGACCGTATAATTAACCACACG 59.795 45.833 3.51 0.00 0.00 4.49
1414 1568 0.249073 GTACGTGCCAGCTCGATGAT 60.249 55.000 19.58 1.19 36.84 2.45
1415 1569 1.138883 GTACGTGCCAGCTCGATGA 59.861 57.895 19.58 3.16 36.84 2.92
1439 1593 3.323903 TACACGCACGCACACACG 61.324 61.111 0.00 0.00 39.50 4.49
1440 1594 2.244382 GTACACGCACGCACACAC 59.756 61.111 0.00 0.00 0.00 3.82
1441 1595 3.323903 CGTACACGCACGCACACA 61.324 61.111 0.00 0.00 34.78 3.72
1442 1596 4.054455 CCGTACACGCACGCACAC 62.054 66.667 0.00 0.00 40.59 3.82
1443 1597 4.572305 ACCGTACACGCACGCACA 62.572 61.111 0.00 0.00 40.59 4.57
1444 1598 3.332409 AACCGTACACGCACGCAC 61.332 61.111 0.00 0.00 40.59 5.34
1445 1599 3.331630 CAACCGTACACGCACGCA 61.332 61.111 0.00 0.00 40.59 5.24
1446 1600 2.995450 CTCAACCGTACACGCACGC 61.995 63.158 0.00 0.00 40.59 5.34
1447 1601 1.602877 GACTCAACCGTACACGCACG 61.603 60.000 0.00 0.00 41.59 5.34
1448 1602 1.602877 CGACTCAACCGTACACGCAC 61.603 60.000 0.00 0.00 38.18 5.34
1449 1603 1.370778 CGACTCAACCGTACACGCA 60.371 57.895 0.00 0.00 38.18 5.24
1450 1604 1.370900 ACGACTCAACCGTACACGC 60.371 57.895 0.00 0.00 38.61 5.34
1451 1605 1.000233 CCACGACTCAACCGTACACG 61.000 60.000 0.00 0.00 38.29 4.49
1452 1606 0.311790 TCCACGACTCAACCGTACAC 59.688 55.000 0.00 0.00 38.29 2.90
1453 1607 0.311790 GTCCACGACTCAACCGTACA 59.688 55.000 0.00 0.00 38.29 2.90
1454 1608 0.727122 CGTCCACGACTCAACCGTAC 60.727 60.000 0.00 0.00 43.02 3.67
1455 1609 1.575922 CGTCCACGACTCAACCGTA 59.424 57.895 0.00 0.00 43.02 4.02
1456 1610 2.333938 CGTCCACGACTCAACCGT 59.666 61.111 0.00 0.00 43.02 4.83
1457 1611 3.103911 GCGTCCACGACTCAACCG 61.104 66.667 2.58 0.00 43.02 4.44
1458 1612 2.737376 GGCGTCCACGACTCAACC 60.737 66.667 2.58 0.00 45.57 3.77
1465 1619 0.892755 ACTCATTTAGGCGTCCACGA 59.107 50.000 2.58 0.00 43.02 4.35
1466 1620 0.999406 CACTCATTTAGGCGTCCACG 59.001 55.000 0.00 0.00 43.27 4.94
1467 1621 2.380084 TCACTCATTTAGGCGTCCAC 57.620 50.000 0.00 0.00 0.00 4.02
1468 1622 2.301870 ACTTCACTCATTTAGGCGTCCA 59.698 45.455 0.00 0.00 0.00 4.02
1469 1623 2.930682 GACTTCACTCATTTAGGCGTCC 59.069 50.000 0.00 0.00 0.00 4.79
1470 1624 3.614616 CAGACTTCACTCATTTAGGCGTC 59.385 47.826 0.00 0.00 0.00 5.19
1471 1625 3.006967 ACAGACTTCACTCATTTAGGCGT 59.993 43.478 0.00 0.00 0.00 5.68
1472 1626 3.589988 ACAGACTTCACTCATTTAGGCG 58.410 45.455 0.00 0.00 0.00 5.52
1473 1627 5.948992 AAACAGACTTCACTCATTTAGGC 57.051 39.130 0.00 0.00 0.00 3.93
1474 1628 7.496529 TCAAAACAGACTTCACTCATTTAGG 57.503 36.000 0.00 0.00 0.00 2.69
1475 1629 7.857885 GGTTCAAAACAGACTTCACTCATTTAG 59.142 37.037 0.00 0.00 0.00 1.85
1476 1630 7.556275 AGGTTCAAAACAGACTTCACTCATTTA 59.444 33.333 0.00 0.00 0.00 1.40
1477 1631 6.378280 AGGTTCAAAACAGACTTCACTCATTT 59.622 34.615 0.00 0.00 0.00 2.32
2231 2802 2.264794 GATCAAGACACGGGCGGT 59.735 61.111 0.00 0.00 0.00 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.