Multiple sequence alignment - TraesCS7B01G240000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G240000 chr7B 100.000 3163 0 0 1 3163 446663866 446667028 0.000000e+00 5842.0
1 TraesCS7B01G240000 chr7B 91.954 174 14 0 2990 3163 521120870 521121043 8.760000e-61 244.0
2 TraesCS7B01G240000 chr7B 86.897 145 15 4 135 277 446663899 446664041 3.270000e-35 159.0
3 TraesCS7B01G240000 chr7B 86.713 143 19 0 34 176 446664000 446664142 3.270000e-35 159.0
4 TraesCS7B01G240000 chr7B 89.691 97 5 4 315 406 559528312 559528216 5.540000e-23 119.0
5 TraesCS7B01G240000 chr7D 95.071 2617 65 34 402 2991 428951420 428953999 0.000000e+00 4060.0
6 TraesCS7B01G240000 chr7A 92.956 2456 89 35 542 2956 503053347 503050935 0.000000e+00 3500.0
7 TraesCS7B01G240000 chr7A 89.362 94 8 1 315 406 321644176 321644083 1.990000e-22 117.0
8 TraesCS7B01G240000 chr1B 94.152 171 10 0 2992 3162 41534857 41535027 8.700000e-66 261.0
9 TraesCS7B01G240000 chr1B 93.902 164 10 0 3000 3163 667737328 667737165 6.770000e-62 248.0
10 TraesCS7B01G240000 chr1B 91.061 179 15 1 2986 3163 59331649 59331827 1.130000e-59 241.0
11 TraesCS7B01G240000 chr1B 81.731 208 31 6 1588 1793 385296737 385296939 1.950000e-37 167.0
12 TraesCS7B01G240000 chr3A 93.529 170 11 0 2994 3163 30752671 30752840 1.460000e-63 254.0
13 TraesCS7B01G240000 chr3A 92.486 173 13 0 2990 3162 40825761 40825589 6.770000e-62 248.0
14 TraesCS7B01G240000 chr3A 90.426 94 5 3 312 402 589846353 589846445 1.540000e-23 121.0
15 TraesCS7B01G240000 chr3A 88.172 93 9 1 317 407 83731830 83731738 3.340000e-20 110.0
16 TraesCS7B01G240000 chr6B 93.976 166 10 0 2998 3163 692003635 692003470 5.240000e-63 252.0
17 TraesCS7B01G240000 chr3B 92.941 170 12 0 2994 3163 49631390 49631221 6.770000e-62 248.0
18 TraesCS7B01G240000 chr3B 92.941 170 12 0 2994 3163 732155035 732155204 6.770000e-62 248.0
19 TraesCS7B01G240000 chr1D 81.690 213 32 6 1583 1793 283617780 283617987 1.510000e-38 171.0
20 TraesCS7B01G240000 chr1A 81.690 213 32 6 1583 1793 355343664 355343871 1.510000e-38 171.0
21 TraesCS7B01G240000 chr1A 91.071 56 5 0 1588 1643 578299977 578300032 3.380000e-10 76.8
22 TraesCS7B01G240000 chr2D 90.000 110 8 2 315 421 560854330 560854439 4.250000e-29 139.0
23 TraesCS7B01G240000 chr2D 90.909 88 6 1 320 405 584896444 584896531 1.990000e-22 117.0
24 TraesCS7B01G240000 chr4D 91.837 98 6 1 313 408 30415635 30415732 5.500000e-28 135.0
25 TraesCS7B01G240000 chr4B 92.391 92 5 1 314 403 12517249 12517340 2.560000e-26 130.0
26 TraesCS7B01G240000 chr5D 82.069 145 22 4 1598 1740 452365184 452365326 1.540000e-23 121.0
27 TraesCS7B01G240000 chr5B 82.069 145 22 4 1598 1740 552564877 552565019 1.540000e-23 121.0
28 TraesCS7B01G240000 chr5A 83.740 123 18 2 1598 1719 571305210 571305331 7.170000e-22 115.0
29 TraesCS7B01G240000 chr2B 88.764 89 10 0 318 406 54786070 54785982 3.340000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G240000 chr7B 446663866 446667028 3162 False 2053.333333 5842 91.203333 1 3163 3 chr7B.!!$F2 3162
1 TraesCS7B01G240000 chr7D 428951420 428953999 2579 False 4060.000000 4060 95.071000 402 2991 1 chr7D.!!$F1 2589
2 TraesCS7B01G240000 chr7A 503050935 503053347 2412 True 3500.000000 3500 92.956000 542 2956 1 chr7A.!!$R2 2414

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.029577 AATCCCCCTCTCTCCCTTCC 60.030 60.0 0.00 0.0 0.0 3.46 F
984 1002 0.234884 CCAGCAAGAACGAACGAACC 59.765 55.0 0.14 0.0 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2011 2048 2.225791 CTTCTCGACGTCCATGGGCA 62.226 60.0 18.31 0.00 0.00 5.36 R
2241 2278 0.457853 TTTCTACTGCTACCGCTGCG 60.458 55.0 16.34 16.34 38.51 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.698874 ATTCCACCAAATCCCCCTCT 58.301 50.000 0.00 0.00 0.00 3.69
20 21 0.999712 TTCCACCAAATCCCCCTCTC 59.000 55.000 0.00 0.00 0.00 3.20
21 22 0.121197 TCCACCAAATCCCCCTCTCT 59.879 55.000 0.00 0.00 0.00 3.10
22 23 0.548510 CCACCAAATCCCCCTCTCTC 59.451 60.000 0.00 0.00 0.00 3.20
23 24 0.548510 CACCAAATCCCCCTCTCTCC 59.451 60.000 0.00 0.00 0.00 3.71
24 25 0.624795 ACCAAATCCCCCTCTCTCCC 60.625 60.000 0.00 0.00 0.00 4.30
25 26 0.327964 CCAAATCCCCCTCTCTCCCT 60.328 60.000 0.00 0.00 0.00 4.20
26 27 1.601248 CAAATCCCCCTCTCTCCCTT 58.399 55.000 0.00 0.00 0.00 3.95
27 28 1.492599 CAAATCCCCCTCTCTCCCTTC 59.507 57.143 0.00 0.00 0.00 3.46
28 29 0.029577 AATCCCCCTCTCTCCCTTCC 60.030 60.000 0.00 0.00 0.00 3.46
29 30 1.238896 ATCCCCCTCTCTCCCTTCCA 61.239 60.000 0.00 0.00 0.00 3.53
30 31 1.082954 CCCCCTCTCTCCCTTCCAA 59.917 63.158 0.00 0.00 0.00 3.53
31 32 1.275421 CCCCCTCTCTCCCTTCCAAC 61.275 65.000 0.00 0.00 0.00 3.77
32 33 0.547712 CCCCTCTCTCCCTTCCAACA 60.548 60.000 0.00 0.00 0.00 3.33
33 34 1.589414 CCCTCTCTCCCTTCCAACAT 58.411 55.000 0.00 0.00 0.00 2.71
34 35 1.918957 CCCTCTCTCCCTTCCAACATT 59.081 52.381 0.00 0.00 0.00 2.71
35 36 3.115390 CCCTCTCTCCCTTCCAACATTA 58.885 50.000 0.00 0.00 0.00 1.90
36 37 3.718956 CCCTCTCTCCCTTCCAACATTAT 59.281 47.826 0.00 0.00 0.00 1.28
37 38 4.202409 CCCTCTCTCCCTTCCAACATTATC 60.202 50.000 0.00 0.00 0.00 1.75
38 39 4.410228 CCTCTCTCCCTTCCAACATTATCA 59.590 45.833 0.00 0.00 0.00 2.15
39 40 5.104360 CCTCTCTCCCTTCCAACATTATCAA 60.104 44.000 0.00 0.00 0.00 2.57
40 41 6.410157 CCTCTCTCCCTTCCAACATTATCAAT 60.410 42.308 0.00 0.00 0.00 2.57
41 42 6.359804 TCTCTCCCTTCCAACATTATCAATG 58.640 40.000 0.00 0.00 44.48 2.82
42 43 5.448654 TCTCCCTTCCAACATTATCAATGG 58.551 41.667 4.09 0.00 43.21 3.16
43 44 3.960102 TCCCTTCCAACATTATCAATGGC 59.040 43.478 4.09 0.00 43.21 4.40
44 45 3.070015 CCCTTCCAACATTATCAATGGCC 59.930 47.826 0.00 0.00 43.21 5.36
45 46 3.705579 CCTTCCAACATTATCAATGGCCA 59.294 43.478 8.56 8.56 43.21 5.36
46 47 4.441913 CCTTCCAACATTATCAATGGCCAC 60.442 45.833 8.16 0.00 43.21 5.01
47 48 3.979911 TCCAACATTATCAATGGCCACT 58.020 40.909 8.16 0.00 43.21 4.00
48 49 3.700539 TCCAACATTATCAATGGCCACTG 59.299 43.478 8.16 8.18 43.21 3.66
49 50 3.700539 CCAACATTATCAATGGCCACTGA 59.299 43.478 20.82 20.82 43.21 3.41
50 51 4.342951 CCAACATTATCAATGGCCACTGAT 59.657 41.667 30.60 30.60 43.21 2.90
51 52 5.286438 CAACATTATCAATGGCCACTGATG 58.714 41.667 34.15 23.76 43.21 3.07
52 53 3.893200 ACATTATCAATGGCCACTGATGG 59.107 43.478 34.15 25.21 44.47 3.51
53 54 5.236727 ACATTATCAATGGCCACTGATGGG 61.237 45.833 34.15 24.91 43.14 4.00
64 65 4.907879 CCACTGATGGGCTTAGAAATTC 57.092 45.455 0.00 0.00 43.04 2.17
65 66 4.530875 CCACTGATGGGCTTAGAAATTCT 58.469 43.478 0.00 0.00 43.04 2.40
66 67 5.684704 CCACTGATGGGCTTAGAAATTCTA 58.315 41.667 0.00 0.00 43.04 2.10
67 68 6.302269 CCACTGATGGGCTTAGAAATTCTAT 58.698 40.000 3.28 0.00 43.04 1.98
68 69 6.429385 CCACTGATGGGCTTAGAAATTCTATC 59.571 42.308 3.28 0.00 43.04 2.08
69 70 6.994496 CACTGATGGGCTTAGAAATTCTATCA 59.006 38.462 3.28 3.97 0.00 2.15
70 71 7.172875 CACTGATGGGCTTAGAAATTCTATCAG 59.827 40.741 20.83 20.83 35.94 2.90
71 72 7.071698 ACTGATGGGCTTAGAAATTCTATCAGA 59.928 37.037 25.72 5.43 34.60 3.27
72 73 7.220030 TGATGGGCTTAGAAATTCTATCAGAC 58.780 38.462 3.28 1.47 0.00 3.51
73 74 6.560003 TGGGCTTAGAAATTCTATCAGACA 57.440 37.500 9.15 3.80 0.00 3.41
74 75 6.349300 TGGGCTTAGAAATTCTATCAGACAC 58.651 40.000 9.15 2.38 0.00 3.67
75 76 5.760743 GGGCTTAGAAATTCTATCAGACACC 59.239 44.000 9.15 3.62 0.00 4.16
76 77 6.349300 GGCTTAGAAATTCTATCAGACACCA 58.651 40.000 3.28 0.00 0.00 4.17
77 78 6.995091 GGCTTAGAAATTCTATCAGACACCAT 59.005 38.462 3.28 0.00 0.00 3.55
78 79 7.172361 GGCTTAGAAATTCTATCAGACACCATC 59.828 40.741 3.28 0.00 0.00 3.51
79 80 7.712639 GCTTAGAAATTCTATCAGACACCATCA 59.287 37.037 3.28 0.00 0.00 3.07
80 81 9.775854 CTTAGAAATTCTATCAGACACCATCAT 57.224 33.333 3.28 0.00 0.00 2.45
85 86 8.859236 AATTCTATCAGACACCATCATATTGG 57.141 34.615 0.00 0.00 42.82 3.16
86 87 5.798132 TCTATCAGACACCATCATATTGGC 58.202 41.667 0.00 0.00 40.68 4.52
87 88 3.213206 TCAGACACCATCATATTGGCC 57.787 47.619 0.00 0.00 40.68 5.36
88 89 1.875514 CAGACACCATCATATTGGCCG 59.124 52.381 0.00 0.00 40.68 6.13
89 90 0.593128 GACACCATCATATTGGCCGC 59.407 55.000 0.00 0.00 40.68 6.53
90 91 1.165907 ACACCATCATATTGGCCGCG 61.166 55.000 0.00 0.00 40.68 6.46
91 92 1.148273 ACCATCATATTGGCCGCGT 59.852 52.632 4.92 0.00 40.68 6.01
92 93 0.465460 ACCATCATATTGGCCGCGTT 60.465 50.000 4.92 0.00 40.68 4.84
93 94 1.202710 ACCATCATATTGGCCGCGTTA 60.203 47.619 4.92 0.00 40.68 3.18
94 95 2.083774 CCATCATATTGGCCGCGTTAT 58.916 47.619 4.92 0.00 0.00 1.89
95 96 3.266636 CCATCATATTGGCCGCGTTATA 58.733 45.455 4.92 0.00 0.00 0.98
96 97 3.876914 CCATCATATTGGCCGCGTTATAT 59.123 43.478 4.92 0.00 0.00 0.86
97 98 4.260743 CCATCATATTGGCCGCGTTATATG 60.261 45.833 4.92 12.00 34.03 1.78
98 99 4.195225 TCATATTGGCCGCGTTATATGA 57.805 40.909 17.91 17.91 37.54 2.15
99 100 4.570930 TCATATTGGCCGCGTTATATGAA 58.429 39.130 18.82 9.21 37.16 2.57
100 101 5.182487 TCATATTGGCCGCGTTATATGAAT 58.818 37.500 18.82 3.41 37.16 2.57
101 102 3.829886 ATTGGCCGCGTTATATGAATG 57.170 42.857 4.92 0.00 0.00 2.67
102 103 0.871722 TGGCCGCGTTATATGAATGC 59.128 50.000 4.92 0.00 0.00 3.56
103 104 0.871722 GGCCGCGTTATATGAATGCA 59.128 50.000 4.92 0.00 32.66 3.96
104 105 1.468520 GGCCGCGTTATATGAATGCAT 59.531 47.619 4.92 0.00 38.54 3.96
105 106 2.095263 GGCCGCGTTATATGAATGCATT 60.095 45.455 12.83 12.83 35.94 3.56
106 107 3.126171 GGCCGCGTTATATGAATGCATTA 59.874 43.478 12.97 0.00 35.94 1.90
107 108 4.088648 GCCGCGTTATATGAATGCATTAC 58.911 43.478 12.97 4.78 35.94 1.89
108 109 4.377943 GCCGCGTTATATGAATGCATTACA 60.378 41.667 12.97 12.41 35.94 2.41
109 110 5.673568 GCCGCGTTATATGAATGCATTACAT 60.674 40.000 12.97 18.02 42.30 2.29
144 145 9.008965 TGTATATTACATGGTGTTATCAATGGC 57.991 33.333 0.00 0.00 32.89 4.40
145 146 5.789643 ATTACATGGTGTTATCAATGGCC 57.210 39.130 0.00 0.00 0.00 5.36
146 147 3.098774 ACATGGTGTTATCAATGGCCA 57.901 42.857 8.56 8.56 0.00 5.36
147 148 3.439154 ACATGGTGTTATCAATGGCCAA 58.561 40.909 10.96 0.00 0.00 4.52
148 149 4.032310 ACATGGTGTTATCAATGGCCAAT 58.968 39.130 10.96 0.00 0.00 3.16
149 150 4.141892 ACATGGTGTTATCAATGGCCAATG 60.142 41.667 15.12 15.12 0.00 2.82
150 151 3.706183 TGGTGTTATCAATGGCCAATGA 58.294 40.909 25.39 25.39 0.00 2.57
151 152 3.700539 TGGTGTTATCAATGGCCAATGAG 59.299 43.478 26.79 9.89 0.00 2.90
152 153 3.491447 GGTGTTATCAATGGCCAATGAGC 60.491 47.826 26.79 19.08 0.00 4.26
153 154 3.130869 GTGTTATCAATGGCCAATGAGCA 59.869 43.478 26.79 21.09 0.00 4.26
154 155 3.382227 TGTTATCAATGGCCAATGAGCAG 59.618 43.478 26.79 0.00 0.00 4.24
155 156 0.750850 ATCAATGGCCAATGAGCAGC 59.249 50.000 26.79 0.00 0.00 5.25
156 157 0.323999 TCAATGGCCAATGAGCAGCT 60.324 50.000 19.85 0.00 0.00 4.24
157 158 0.535335 CAATGGCCAATGAGCAGCTT 59.465 50.000 16.27 0.00 0.00 3.74
158 159 1.752498 CAATGGCCAATGAGCAGCTTA 59.248 47.619 16.27 0.00 0.00 3.09
159 160 1.688772 ATGGCCAATGAGCAGCTTAG 58.311 50.000 10.96 0.00 0.00 2.18
160 161 0.620030 TGGCCAATGAGCAGCTTAGA 59.380 50.000 0.61 0.00 0.00 2.10
161 162 1.004628 TGGCCAATGAGCAGCTTAGAA 59.995 47.619 0.61 0.00 0.00 2.10
162 163 2.094675 GGCCAATGAGCAGCTTAGAAA 58.905 47.619 0.00 0.00 0.00 2.52
163 164 2.692041 GGCCAATGAGCAGCTTAGAAAT 59.308 45.455 0.00 0.00 0.00 2.17
164 165 3.131755 GGCCAATGAGCAGCTTAGAAATT 59.868 43.478 0.00 0.00 0.00 1.82
165 166 4.357996 GCCAATGAGCAGCTTAGAAATTC 58.642 43.478 0.00 0.00 0.00 2.17
166 167 4.097589 GCCAATGAGCAGCTTAGAAATTCT 59.902 41.667 0.00 0.00 0.00 2.40
167 168 5.297776 GCCAATGAGCAGCTTAGAAATTCTA 59.702 40.000 0.00 0.00 0.00 2.10
168 169 6.723282 CCAATGAGCAGCTTAGAAATTCTAC 58.277 40.000 1.61 0.00 0.00 2.59
169 170 6.238593 CCAATGAGCAGCTTAGAAATTCTACC 60.239 42.308 1.61 0.00 0.00 3.18
170 171 5.683876 TGAGCAGCTTAGAAATTCTACCT 57.316 39.130 1.61 0.00 0.00 3.08
171 172 5.423015 TGAGCAGCTTAGAAATTCTACCTG 58.577 41.667 18.21 18.21 34.37 4.00
172 173 5.187772 TGAGCAGCTTAGAAATTCTACCTGA 59.812 40.000 23.13 8.67 33.69 3.86
173 174 5.423886 AGCAGCTTAGAAATTCTACCTGAC 58.576 41.667 23.13 16.96 33.69 3.51
174 175 4.268884 GCAGCTTAGAAATTCTACCTGACG 59.731 45.833 23.13 6.55 33.69 4.35
175 176 4.268884 CAGCTTAGAAATTCTACCTGACGC 59.731 45.833 17.90 4.27 33.69 5.19
176 177 3.556365 GCTTAGAAATTCTACCTGACGCC 59.444 47.826 1.61 0.00 0.00 5.68
177 178 4.755411 CTTAGAAATTCTACCTGACGCCA 58.245 43.478 1.61 0.00 0.00 5.69
178 179 3.914426 AGAAATTCTACCTGACGCCAT 57.086 42.857 0.00 0.00 0.00 4.40
179 180 4.222124 AGAAATTCTACCTGACGCCATT 57.778 40.909 0.00 0.00 0.00 3.16
180 181 4.192317 AGAAATTCTACCTGACGCCATTC 58.808 43.478 0.00 0.00 0.00 2.67
181 182 3.914426 AATTCTACCTGACGCCATTCT 57.086 42.857 0.00 0.00 0.00 2.40
182 183 5.128827 AGAAATTCTACCTGACGCCATTCTA 59.871 40.000 0.00 0.00 0.00 2.10
183 184 5.552870 AATTCTACCTGACGCCATTCTAT 57.447 39.130 0.00 0.00 0.00 1.98
184 185 6.665992 AATTCTACCTGACGCCATTCTATA 57.334 37.500 0.00 0.00 0.00 1.31
185 186 6.859112 ATTCTACCTGACGCCATTCTATAT 57.141 37.500 0.00 0.00 0.00 0.86
186 187 7.956328 ATTCTACCTGACGCCATTCTATATA 57.044 36.000 0.00 0.00 0.00 0.86
187 188 6.754702 TCTACCTGACGCCATTCTATATAC 57.245 41.667 0.00 0.00 0.00 1.47
188 189 4.803098 ACCTGACGCCATTCTATATACC 57.197 45.455 0.00 0.00 0.00 2.73
189 190 3.192844 ACCTGACGCCATTCTATATACCG 59.807 47.826 0.00 0.00 0.00 4.02
190 191 3.192844 CCTGACGCCATTCTATATACCGT 59.807 47.826 0.00 0.00 0.00 4.83
191 192 4.166523 CTGACGCCATTCTATATACCGTG 58.833 47.826 0.00 0.00 0.00 4.94
192 193 3.570975 TGACGCCATTCTATATACCGTGT 59.429 43.478 0.00 0.00 0.00 4.49
193 194 4.038282 TGACGCCATTCTATATACCGTGTT 59.962 41.667 0.00 0.00 0.00 3.32
194 195 5.241285 TGACGCCATTCTATATACCGTGTTA 59.759 40.000 0.00 0.00 0.00 2.41
195 196 6.071784 TGACGCCATTCTATATACCGTGTTAT 60.072 38.462 0.00 0.00 0.00 1.89
196 197 7.121020 TGACGCCATTCTATATACCGTGTTATA 59.879 37.037 0.00 0.00 0.00 0.98
197 198 8.004087 ACGCCATTCTATATACCGTGTTATAT 57.996 34.615 0.00 0.00 0.00 0.86
198 199 7.919091 ACGCCATTCTATATACCGTGTTATATG 59.081 37.037 0.00 0.00 0.00 1.78
199 200 8.132995 CGCCATTCTATATACCGTGTTATATGA 58.867 37.037 0.00 0.00 0.00 2.15
200 201 9.811995 GCCATTCTATATACCGTGTTATATGAA 57.188 33.333 0.00 0.00 0.00 2.57
208 209 7.744087 ATACCGTGTTATATGAATGCATTGT 57.256 32.000 18.59 7.90 35.94 2.71
209 210 5.820131 ACCGTGTTATATGAATGCATTGTG 58.180 37.500 18.59 0.00 35.94 3.33
210 211 5.356751 ACCGTGTTATATGAATGCATTGTGT 59.643 36.000 18.59 6.30 35.94 3.72
211 212 6.127758 ACCGTGTTATATGAATGCATTGTGTT 60.128 34.615 18.59 1.76 35.94 3.32
212 213 6.196910 CCGTGTTATATGAATGCATTGTGTTG 59.803 38.462 18.59 0.00 35.94 3.33
213 214 6.966066 CGTGTTATATGAATGCATTGTGTTGA 59.034 34.615 18.59 0.00 35.94 3.18
214 215 7.644945 CGTGTTATATGAATGCATTGTGTTGAT 59.355 33.333 18.59 4.13 35.94 2.57
215 216 8.748582 GTGTTATATGAATGCATTGTGTTGATG 58.251 33.333 18.59 0.00 35.94 3.07
216 217 8.468399 TGTTATATGAATGCATTGTGTTGATGT 58.532 29.630 18.59 0.00 35.94 3.06
217 218 9.949174 GTTATATGAATGCATTGTGTTGATGTA 57.051 29.630 18.59 0.00 35.94 2.29
220 221 7.764695 ATGAATGCATTGTGTTGATGTAATG 57.235 32.000 18.59 0.00 34.51 1.90
221 222 6.689554 TGAATGCATTGTGTTGATGTAATGT 58.310 32.000 18.59 0.00 34.04 2.71
222 223 7.824672 TGAATGCATTGTGTTGATGTAATGTA 58.175 30.769 18.59 0.00 34.04 2.29
223 224 8.468399 TGAATGCATTGTGTTGATGTAATGTAT 58.532 29.630 18.59 0.00 37.42 2.29
224 225 9.949174 GAATGCATTGTGTTGATGTAATGTATA 57.051 29.630 18.59 0.00 35.68 1.47
227 228 9.118300 TGCATTGTGTTGATGTAATGTATATCA 57.882 29.630 0.00 0.00 34.99 2.15
228 229 9.385902 GCATTGTGTTGATGTAATGTATATCAC 57.614 33.333 0.00 0.00 36.27 3.06
244 245 8.620116 TGTATATCACATGGTGTTATCAATGG 57.380 34.615 0.00 0.00 32.74 3.16
245 246 4.924305 ATCACATGGTGTTATCAATGGC 57.076 40.909 0.00 0.00 34.79 4.40
246 247 3.023119 TCACATGGTGTTATCAATGGCC 58.977 45.455 0.00 0.00 34.79 5.36
247 248 2.759535 CACATGGTGTTATCAATGGCCA 59.240 45.455 8.56 8.56 0.00 5.36
248 249 3.195182 CACATGGTGTTATCAATGGCCAA 59.805 43.478 10.96 0.00 0.00 4.52
249 250 4.032310 ACATGGTGTTATCAATGGCCAAT 58.968 39.130 10.96 0.00 0.00 3.16
250 251 4.141892 ACATGGTGTTATCAATGGCCAATG 60.142 41.667 15.12 15.12 0.00 2.82
251 252 3.706183 TGGTGTTATCAATGGCCAATGA 58.294 40.909 25.39 25.39 0.00 2.57
252 253 3.700539 TGGTGTTATCAATGGCCAATGAG 59.299 43.478 26.79 9.89 0.00 2.90
253 254 3.491447 GGTGTTATCAATGGCCAATGAGC 60.491 47.826 26.79 19.08 0.00 4.26
254 255 3.130869 GTGTTATCAATGGCCAATGAGCA 59.869 43.478 26.79 21.09 0.00 4.26
255 256 3.382227 TGTTATCAATGGCCAATGAGCAG 59.618 43.478 26.79 0.00 0.00 4.24
256 257 0.750850 ATCAATGGCCAATGAGCAGC 59.249 50.000 26.79 0.00 0.00 5.25
257 258 0.323999 TCAATGGCCAATGAGCAGCT 60.324 50.000 19.85 0.00 0.00 4.24
258 259 0.535335 CAATGGCCAATGAGCAGCTT 59.465 50.000 16.27 0.00 0.00 3.74
259 260 1.752498 CAATGGCCAATGAGCAGCTTA 59.248 47.619 16.27 0.00 0.00 3.09
260 261 1.688772 ATGGCCAATGAGCAGCTTAG 58.311 50.000 10.96 0.00 0.00 2.18
261 262 0.620030 TGGCCAATGAGCAGCTTAGA 59.380 50.000 0.61 0.00 0.00 2.10
262 263 1.004628 TGGCCAATGAGCAGCTTAGAA 59.995 47.619 0.61 0.00 0.00 2.10
263 264 2.094675 GGCCAATGAGCAGCTTAGAAA 58.905 47.619 0.00 0.00 0.00 2.52
264 265 2.692041 GGCCAATGAGCAGCTTAGAAAT 59.308 45.455 0.00 0.00 0.00 2.17
265 266 3.131755 GGCCAATGAGCAGCTTAGAAATT 59.868 43.478 0.00 0.00 0.00 1.82
266 267 4.357996 GCCAATGAGCAGCTTAGAAATTC 58.642 43.478 0.00 0.00 0.00 2.17
267 268 4.097589 GCCAATGAGCAGCTTAGAAATTCT 59.902 41.667 0.00 0.00 0.00 2.40
268 269 5.297776 GCCAATGAGCAGCTTAGAAATTCTA 59.702 40.000 0.00 0.00 0.00 2.10
269 270 6.723282 CCAATGAGCAGCTTAGAAATTCTAC 58.277 40.000 1.61 0.00 0.00 2.59
270 271 6.238593 CCAATGAGCAGCTTAGAAATTCTACC 60.239 42.308 1.61 0.00 0.00 3.18
271 272 5.683876 TGAGCAGCTTAGAAATTCTACCT 57.316 39.130 1.61 0.00 0.00 3.08
272 273 5.423015 TGAGCAGCTTAGAAATTCTACCTG 58.577 41.667 18.21 18.21 34.37 4.00
273 274 5.187772 TGAGCAGCTTAGAAATTCTACCTGA 59.812 40.000 23.13 8.67 33.69 3.86
274 275 5.423886 AGCAGCTTAGAAATTCTACCTGAC 58.576 41.667 23.13 16.96 33.69 3.51
275 276 4.268884 GCAGCTTAGAAATTCTACCTGACG 59.731 45.833 23.13 6.55 33.69 4.35
276 277 4.268884 CAGCTTAGAAATTCTACCTGACGC 59.731 45.833 17.90 4.27 33.69 5.19
277 278 4.081642 AGCTTAGAAATTCTACCTGACGCA 60.082 41.667 1.61 0.00 0.00 5.24
278 279 4.811557 GCTTAGAAATTCTACCTGACGCAT 59.188 41.667 1.61 0.00 0.00 4.73
279 280 5.050702 GCTTAGAAATTCTACCTGACGCATC 60.051 44.000 1.61 0.00 0.00 3.91
280 281 4.471904 AGAAATTCTACCTGACGCATCA 57.528 40.909 0.00 0.00 0.00 3.07
281 282 5.028549 AGAAATTCTACCTGACGCATCAT 57.971 39.130 0.00 0.00 33.22 2.45
282 283 6.161855 AGAAATTCTACCTGACGCATCATA 57.838 37.500 0.00 0.00 33.22 2.15
283 284 6.763355 AGAAATTCTACCTGACGCATCATAT 58.237 36.000 0.00 0.00 33.22 1.78
284 285 6.870965 AGAAATTCTACCTGACGCATCATATC 59.129 38.462 0.00 0.00 33.22 1.63
285 286 5.991933 ATTCTACCTGACGCATCATATCT 57.008 39.130 0.00 0.00 33.22 1.98
286 287 4.773323 TCTACCTGACGCATCATATCTG 57.227 45.455 0.00 0.00 33.22 2.90
287 288 2.827800 ACCTGACGCATCATATCTGG 57.172 50.000 0.00 0.00 37.45 3.86
288 289 1.270518 ACCTGACGCATCATATCTGGC 60.271 52.381 0.00 0.00 35.46 4.85
291 292 4.273811 CGCATCATATCTGGCGCT 57.726 55.556 7.64 0.00 43.14 5.92
292 293 2.536725 CGCATCATATCTGGCGCTT 58.463 52.632 7.64 0.00 43.14 4.68
293 294 0.870393 CGCATCATATCTGGCGCTTT 59.130 50.000 7.64 0.00 43.14 3.51
294 295 1.399343 CGCATCATATCTGGCGCTTTG 60.399 52.381 7.64 0.00 43.14 2.77
295 296 1.605710 GCATCATATCTGGCGCTTTGT 59.394 47.619 7.64 0.00 0.00 2.83
296 297 2.807967 GCATCATATCTGGCGCTTTGTA 59.192 45.455 7.64 0.00 0.00 2.41
297 298 3.364366 GCATCATATCTGGCGCTTTGTAC 60.364 47.826 7.64 0.00 0.00 2.90
298 299 2.469826 TCATATCTGGCGCTTTGTACG 58.530 47.619 7.64 0.00 0.00 3.67
299 300 2.100087 TCATATCTGGCGCTTTGTACGA 59.900 45.455 7.64 0.00 0.00 3.43
300 301 2.658373 TATCTGGCGCTTTGTACGAA 57.342 45.000 7.64 0.00 0.00 3.85
301 302 2.024176 ATCTGGCGCTTTGTACGAAT 57.976 45.000 7.64 0.00 0.00 3.34
302 303 1.075542 TCTGGCGCTTTGTACGAATG 58.924 50.000 7.64 0.00 0.00 2.67
303 304 0.796312 CTGGCGCTTTGTACGAATGT 59.204 50.000 7.64 0.00 0.00 2.71
304 305 0.515127 TGGCGCTTTGTACGAATGTG 59.485 50.000 7.64 0.00 0.00 3.21
305 306 0.515564 GGCGCTTTGTACGAATGTGT 59.484 50.000 7.64 0.00 0.00 3.72
306 307 1.591248 GCGCTTTGTACGAATGTGTG 58.409 50.000 0.00 0.00 0.00 3.82
307 308 1.591248 CGCTTTGTACGAATGTGTGC 58.409 50.000 0.00 0.00 0.00 4.57
308 309 1.591248 GCTTTGTACGAATGTGTGCG 58.409 50.000 0.00 0.00 0.00 5.34
309 310 1.070175 GCTTTGTACGAATGTGTGCGT 60.070 47.619 0.00 0.00 43.86 5.24
310 311 2.601266 GCTTTGTACGAATGTGTGCGTT 60.601 45.455 0.00 0.00 41.49 4.84
311 312 2.654426 TTGTACGAATGTGTGCGTTG 57.346 45.000 0.00 0.00 41.49 4.10
312 313 1.854227 TGTACGAATGTGTGCGTTGA 58.146 45.000 0.00 0.00 41.49 3.18
313 314 2.409012 TGTACGAATGTGTGCGTTGAT 58.591 42.857 0.00 0.00 41.49 2.57
314 315 3.576648 TGTACGAATGTGTGCGTTGATA 58.423 40.909 0.00 0.00 41.49 2.15
315 316 4.177783 TGTACGAATGTGTGCGTTGATAT 58.822 39.130 0.00 0.00 41.49 1.63
316 317 5.341617 TGTACGAATGTGTGCGTTGATATA 58.658 37.500 0.00 0.00 41.49 0.86
317 318 5.980715 TGTACGAATGTGTGCGTTGATATAT 59.019 36.000 0.00 0.00 41.49 0.86
318 319 5.984233 ACGAATGTGTGCGTTGATATATT 57.016 34.783 0.00 0.00 37.48 1.28
319 320 5.737353 ACGAATGTGTGCGTTGATATATTG 58.263 37.500 0.00 0.00 37.48 1.90
320 321 5.293324 ACGAATGTGTGCGTTGATATATTGT 59.707 36.000 0.00 0.00 37.48 2.71
321 322 6.477360 ACGAATGTGTGCGTTGATATATTGTA 59.523 34.615 0.00 0.00 37.48 2.41
322 323 6.785633 CGAATGTGTGCGTTGATATATTGTAC 59.214 38.462 0.00 0.00 0.00 2.90
323 324 7.306574 CGAATGTGTGCGTTGATATATTGTACT 60.307 37.037 0.00 0.00 0.00 2.73
324 325 6.822073 TGTGTGCGTTGATATATTGTACTC 57.178 37.500 0.00 0.00 0.00 2.59
325 326 5.751509 TGTGTGCGTTGATATATTGTACTCC 59.248 40.000 0.00 0.00 0.00 3.85
326 327 5.176958 GTGTGCGTTGATATATTGTACTCCC 59.823 44.000 0.00 0.00 0.00 4.30
327 328 5.069914 TGTGCGTTGATATATTGTACTCCCT 59.930 40.000 0.00 0.00 0.00 4.20
328 329 5.634020 GTGCGTTGATATATTGTACTCCCTC 59.366 44.000 0.00 0.00 0.00 4.30
329 330 5.169295 GCGTTGATATATTGTACTCCCTCC 58.831 45.833 0.00 0.00 0.00 4.30
330 331 5.399858 CGTTGATATATTGTACTCCCTCCG 58.600 45.833 0.00 0.00 0.00 4.63
331 332 5.048224 CGTTGATATATTGTACTCCCTCCGT 60.048 44.000 0.00 0.00 0.00 4.69
332 333 6.149973 CGTTGATATATTGTACTCCCTCCGTA 59.850 42.308 0.00 0.00 0.00 4.02
333 334 7.308770 CGTTGATATATTGTACTCCCTCCGTAA 60.309 40.741 0.00 0.00 0.00 3.18
334 335 8.362639 GTTGATATATTGTACTCCCTCCGTAAA 58.637 37.037 0.00 0.00 0.00 2.01
335 336 7.889469 TGATATATTGTACTCCCTCCGTAAAC 58.111 38.462 0.00 0.00 0.00 2.01
336 337 7.727186 TGATATATTGTACTCCCTCCGTAAACT 59.273 37.037 0.00 0.00 0.00 2.66
337 338 9.236006 GATATATTGTACTCCCTCCGTAAACTA 57.764 37.037 0.00 0.00 0.00 2.24
338 339 7.902920 ATATTGTACTCCCTCCGTAAACTAA 57.097 36.000 0.00 0.00 0.00 2.24
339 340 6.803366 ATTGTACTCCCTCCGTAAACTAAT 57.197 37.500 0.00 0.00 0.00 1.73
340 341 7.902920 ATTGTACTCCCTCCGTAAACTAATA 57.097 36.000 0.00 0.00 0.00 0.98
341 342 7.902920 TTGTACTCCCTCCGTAAACTAATAT 57.097 36.000 0.00 0.00 0.00 1.28
342 343 7.281040 TGTACTCCCTCCGTAAACTAATATG 57.719 40.000 0.00 0.00 0.00 1.78
343 344 7.062322 TGTACTCCCTCCGTAAACTAATATGA 58.938 38.462 0.00 0.00 0.00 2.15
344 345 6.651975 ACTCCCTCCGTAAACTAATATGAG 57.348 41.667 0.00 0.00 0.00 2.90
345 346 5.010820 ACTCCCTCCGTAAACTAATATGAGC 59.989 44.000 0.00 0.00 0.00 4.26
346 347 4.022589 TCCCTCCGTAAACTAATATGAGCG 60.023 45.833 0.00 0.00 0.00 5.03
347 348 4.261909 CCCTCCGTAAACTAATATGAGCGT 60.262 45.833 0.00 0.00 0.00 5.07
348 349 5.287226 CCTCCGTAAACTAATATGAGCGTT 58.713 41.667 0.00 0.00 0.00 4.84
349 350 5.751990 CCTCCGTAAACTAATATGAGCGTTT 59.248 40.000 0.00 0.00 34.37 3.60
350 351 6.919662 CCTCCGTAAACTAATATGAGCGTTTA 59.080 38.462 0.00 0.00 32.46 2.01
351 352 7.114529 CCTCCGTAAACTAATATGAGCGTTTAG 59.885 40.741 0.00 0.00 33.87 1.85
352 353 7.706159 TCCGTAAACTAATATGAGCGTTTAGA 58.294 34.615 0.00 0.00 33.87 2.10
353 354 8.190122 TCCGTAAACTAATATGAGCGTTTAGAA 58.810 33.333 0.00 0.00 33.87 2.10
354 355 8.975439 CCGTAAACTAATATGAGCGTTTAGAAT 58.025 33.333 0.00 0.00 33.87 2.40
399 400 9.841295 ACGCTTTTATATTAATTTACAGAGGGA 57.159 29.630 0.00 0.00 0.00 4.20
418 419 8.535335 CAGAGGGAGTATATTGCATAGTGTTAT 58.465 37.037 0.00 0.00 0.00 1.89
420 421 7.624549 AGGGAGTATATTGCATAGTGTTATGG 58.375 38.462 0.00 0.00 37.68 2.74
421 422 6.823689 GGGAGTATATTGCATAGTGTTATGGG 59.176 42.308 0.00 0.00 37.68 4.00
424 425 7.168219 AGTATATTGCATAGTGTTATGGGTGG 58.832 38.462 0.00 0.00 37.68 4.61
440 441 1.526686 TGGCCAATGCGCATCCTAG 60.527 57.895 25.53 13.47 38.85 3.02
456 457 7.042051 GCGCATCCTAGTAGAAATTAAACATCA 60.042 37.037 0.30 0.00 0.00 3.07
526 527 9.450807 AATAATCGCAAAAAGTATACTCATTGC 57.549 29.630 28.64 28.64 40.76 3.56
543 544 5.614308 TCATTGCCCATATGAGTACTGAAG 58.386 41.667 0.00 0.00 0.00 3.02
544 545 5.366477 TCATTGCCCATATGAGTACTGAAGA 59.634 40.000 0.00 0.00 0.00 2.87
547 548 6.252599 TGCCCATATGAGTACTGAAGAAAT 57.747 37.500 0.00 0.00 0.00 2.17
585 589 6.849085 AAAAACTGTATGTTCATATGGGCA 57.151 33.333 2.13 2.84 38.03 5.36
586 590 6.849085 AAAACTGTATGTTCATATGGGCAA 57.151 33.333 2.13 0.00 38.03 4.52
587 591 7.422465 AAAACTGTATGTTCATATGGGCAAT 57.578 32.000 2.13 0.00 38.03 3.56
589 593 5.693961 ACTGTATGTTCATATGGGCAATGA 58.306 37.500 2.13 0.00 0.00 2.57
590 594 5.766670 ACTGTATGTTCATATGGGCAATGAG 59.233 40.000 2.13 3.17 34.93 2.90
591 595 5.693961 TGTATGTTCATATGGGCAATGAGT 58.306 37.500 2.13 0.00 34.93 3.41
592 596 6.836242 TGTATGTTCATATGGGCAATGAGTA 58.164 36.000 2.13 0.00 34.93 2.59
593 597 7.460910 TGTATGTTCATATGGGCAATGAGTAT 58.539 34.615 2.13 0.00 34.93 2.12
594 598 8.601546 TGTATGTTCATATGGGCAATGAGTATA 58.398 33.333 2.13 0.00 34.93 1.47
595 599 9.618890 GTATGTTCATATGGGCAATGAGTATAT 57.381 33.333 2.13 0.00 34.93 0.86
597 601 8.938801 TGTTCATATGGGCAATGAGTATATTT 57.061 30.769 2.13 0.00 34.93 1.40
598 602 9.365906 TGTTCATATGGGCAATGAGTATATTTT 57.634 29.630 2.13 0.00 34.93 1.82
699 712 4.436998 GACCGTGCTCTGTCCCCG 62.437 72.222 0.00 0.00 0.00 5.73
736 749 2.507886 TCTCACCCCTTTGACTTTGTCA 59.492 45.455 0.00 0.00 41.09 3.58
738 751 1.681264 CACCCCTTTGACTTTGTCACC 59.319 52.381 0.00 0.00 42.60 4.02
813 826 2.886730 ATAAAACGCAGCCCCCTCGG 62.887 60.000 0.00 0.00 0.00 4.63
867 880 2.203538 GCCGGATCCAATGCCCAT 60.204 61.111 13.41 0.00 0.00 4.00
868 881 2.270986 GCCGGATCCAATGCCCATC 61.271 63.158 13.41 0.00 0.00 3.51
869 882 1.604593 CCGGATCCAATGCCCATCC 60.605 63.158 13.41 0.00 33.85 3.51
870 883 1.604593 CGGATCCAATGCCCATCCC 60.605 63.158 13.41 0.00 33.65 3.85
871 884 1.856323 GGATCCAATGCCCATCCCT 59.144 57.895 6.95 0.00 31.31 4.20
980 998 1.061131 CATAGCCAGCAAGAACGAACG 59.939 52.381 0.00 0.00 0.00 3.95
981 999 0.315886 TAGCCAGCAAGAACGAACGA 59.684 50.000 0.14 0.00 0.00 3.85
982 1000 0.531974 AGCCAGCAAGAACGAACGAA 60.532 50.000 0.14 0.00 0.00 3.85
983 1001 0.384353 GCCAGCAAGAACGAACGAAC 60.384 55.000 0.14 0.00 0.00 3.95
984 1002 0.234884 CCAGCAAGAACGAACGAACC 59.765 55.000 0.14 0.00 0.00 3.62
1225 1253 4.392166 TCCACGGGGGCTCTGCTA 62.392 66.667 2.42 0.00 36.21 3.49
2236 2273 3.429141 CCTGGCTCGTTGCAGCAG 61.429 66.667 0.24 0.00 45.15 4.24
2237 2274 4.099170 CTGGCTCGTTGCAGCAGC 62.099 66.667 13.74 13.74 45.15 5.25
2270 2307 6.237861 GCGGTAGCAGTAGAAACATAAGAAAG 60.238 42.308 0.00 0.00 44.35 2.62
2470 2507 5.645929 ACCAAACCCAAAGACAATGTTTTTC 59.354 36.000 0.00 0.00 0.00 2.29
2504 2546 1.894466 TGACATGTTTGGGCCATTCAG 59.106 47.619 7.26 6.70 0.00 3.02
2575 2617 6.573664 ACACTAGCTAGACTGATCATCATC 57.426 41.667 27.45 0.00 0.00 2.92
2576 2618 6.067350 ACACTAGCTAGACTGATCATCATCA 58.933 40.000 27.45 0.00 36.62 3.07
2577 2619 6.720748 ACACTAGCTAGACTGATCATCATCAT 59.279 38.462 27.45 0.00 38.42 2.45
2578 2620 7.094248 ACACTAGCTAGACTGATCATCATCATC 60.094 40.741 27.45 0.00 38.42 2.92
2579 2621 6.947158 ACTAGCTAGACTGATCATCATCATCA 59.053 38.462 27.45 0.00 38.42 3.07
2580 2622 6.860790 AGCTAGACTGATCATCATCATCAT 57.139 37.500 0.00 0.00 38.42 2.45
2657 2704 5.073691 AGGACAGAAATGGAAGAAAGGAAGA 59.926 40.000 0.00 0.00 0.00 2.87
2897 2945 3.758755 TCATGTTGCTCTTCTCAGTGT 57.241 42.857 0.00 0.00 0.00 3.55
2899 2947 5.213891 TCATGTTGCTCTTCTCAGTGTAA 57.786 39.130 0.00 0.00 0.00 2.41
2901 2949 5.640783 TCATGTTGCTCTTCTCAGTGTAATG 59.359 40.000 0.00 0.00 0.00 1.90
2902 2950 4.960938 TGTTGCTCTTCTCAGTGTAATGT 58.039 39.130 0.00 0.00 0.00 2.71
2922 2977 5.199024 TGTGATGTTGGTTTCTTTGGATG 57.801 39.130 0.00 0.00 0.00 3.51
2926 2981 2.224018 TGTTGGTTTCTTTGGATGCTGC 60.224 45.455 0.00 0.00 0.00 5.25
2946 3001 2.936498 GCTGAAGTACATGGCGTGTAAT 59.064 45.455 20.48 17.03 44.52 1.89
2951 3006 5.347620 AAGTACATGGCGTGTAATTCCTA 57.652 39.130 22.73 0.00 45.52 2.94
2959 3014 5.945155 TGGCGTGTAATTCCTAATGAAAAC 58.055 37.500 0.00 0.00 36.33 2.43
2962 3017 6.691388 GGCGTGTAATTCCTAATGAAAACATC 59.309 38.462 0.00 0.00 36.15 3.06
2964 3019 6.905076 CGTGTAATTCCTAATGAAAACATCGG 59.095 38.462 0.00 0.00 36.15 4.18
2975 3030 2.699251 AAACATCGGCTTTTTCGGTC 57.301 45.000 0.00 0.00 0.00 4.79
2991 3046 5.462530 TTCGGTCGAATGTGGATGTATAT 57.537 39.130 1.33 0.00 0.00 0.86
2992 3047 6.578163 TTCGGTCGAATGTGGATGTATATA 57.422 37.500 1.33 0.00 0.00 0.86
2993 3048 6.578163 TCGGTCGAATGTGGATGTATATAA 57.422 37.500 0.00 0.00 0.00 0.98
2994 3049 6.617879 TCGGTCGAATGTGGATGTATATAAG 58.382 40.000 0.00 0.00 0.00 1.73
2995 3050 5.805486 CGGTCGAATGTGGATGTATATAAGG 59.195 44.000 0.00 0.00 0.00 2.69
2996 3051 6.571731 CGGTCGAATGTGGATGTATATAAGGT 60.572 42.308 0.00 0.00 0.00 3.50
2997 3052 6.812160 GGTCGAATGTGGATGTATATAAGGTC 59.188 42.308 0.00 0.00 0.00 3.85
2998 3053 7.309867 GGTCGAATGTGGATGTATATAAGGTCT 60.310 40.741 0.00 0.00 0.00 3.85
2999 3054 8.088981 GTCGAATGTGGATGTATATAAGGTCTT 58.911 37.037 0.00 0.00 0.00 3.01
3000 3055 8.088365 TCGAATGTGGATGTATATAAGGTCTTG 58.912 37.037 0.00 0.00 0.00 3.02
3001 3056 7.872993 CGAATGTGGATGTATATAAGGTCTTGT 59.127 37.037 0.00 0.00 0.00 3.16
3003 3058 9.998106 AATGTGGATGTATATAAGGTCTTGTAC 57.002 33.333 0.00 0.00 0.00 2.90
3004 3059 8.541899 TGTGGATGTATATAAGGTCTTGTACA 57.458 34.615 0.00 0.00 0.00 2.90
3005 3060 8.983789 TGTGGATGTATATAAGGTCTTGTACAA 58.016 33.333 8.28 8.28 0.00 2.41
3006 3061 9.998106 GTGGATGTATATAAGGTCTTGTACAAT 57.002 33.333 9.13 0.00 0.00 2.71
3007 3062 9.996554 TGGATGTATATAAGGTCTTGTACAATG 57.003 33.333 9.13 3.87 0.00 2.82
3008 3063 9.436957 GGATGTATATAAGGTCTTGTACAATGG 57.563 37.037 9.13 0.00 0.00 3.16
3009 3064 9.436957 GATGTATATAAGGTCTTGTACAATGGG 57.563 37.037 9.13 0.00 0.00 4.00
3010 3065 8.555896 TGTATATAAGGTCTTGTACAATGGGA 57.444 34.615 9.13 0.00 0.00 4.37
3011 3066 8.647796 TGTATATAAGGTCTTGTACAATGGGAG 58.352 37.037 9.13 0.00 0.00 4.30
3012 3067 3.721087 AAGGTCTTGTACAATGGGAGG 57.279 47.619 9.13 0.00 0.00 4.30
3013 3068 2.632537 AGGTCTTGTACAATGGGAGGT 58.367 47.619 9.13 0.00 0.00 3.85
3014 3069 2.305927 AGGTCTTGTACAATGGGAGGTG 59.694 50.000 9.13 0.00 0.00 4.00
3015 3070 2.084546 GTCTTGTACAATGGGAGGTGC 58.915 52.381 9.13 0.00 0.00 5.01
3016 3071 1.985159 TCTTGTACAATGGGAGGTGCT 59.015 47.619 9.13 0.00 0.00 4.40
3017 3072 2.375174 TCTTGTACAATGGGAGGTGCTT 59.625 45.455 9.13 0.00 0.00 3.91
3018 3073 3.585289 TCTTGTACAATGGGAGGTGCTTA 59.415 43.478 9.13 0.00 0.00 3.09
3019 3074 3.627395 TGTACAATGGGAGGTGCTTAG 57.373 47.619 0.00 0.00 0.00 2.18
3020 3075 2.238646 TGTACAATGGGAGGTGCTTAGG 59.761 50.000 0.00 0.00 0.00 2.69
3021 3076 0.625849 ACAATGGGAGGTGCTTAGGG 59.374 55.000 0.00 0.00 0.00 3.53
3022 3077 0.918983 CAATGGGAGGTGCTTAGGGA 59.081 55.000 0.00 0.00 0.00 4.20
3023 3078 1.284785 CAATGGGAGGTGCTTAGGGAA 59.715 52.381 0.00 0.00 0.00 3.97
3024 3079 1.216990 ATGGGAGGTGCTTAGGGAAG 58.783 55.000 0.00 0.00 35.60 3.46
3025 3080 0.118346 TGGGAGGTGCTTAGGGAAGA 59.882 55.000 0.00 0.00 34.25 2.87
3026 3081 1.274416 TGGGAGGTGCTTAGGGAAGAT 60.274 52.381 0.00 0.00 34.25 2.40
3027 3082 1.141858 GGGAGGTGCTTAGGGAAGATG 59.858 57.143 0.00 0.00 34.25 2.90
3028 3083 1.475930 GGAGGTGCTTAGGGAAGATGC 60.476 57.143 0.00 0.00 34.25 3.91
3029 3084 1.488393 GAGGTGCTTAGGGAAGATGCT 59.512 52.381 0.00 0.00 34.25 3.79
3030 3085 1.918957 AGGTGCTTAGGGAAGATGCTT 59.081 47.619 0.00 0.00 34.25 3.91
3031 3086 3.115390 AGGTGCTTAGGGAAGATGCTTA 58.885 45.455 0.00 0.00 34.25 3.09
3032 3087 3.135530 AGGTGCTTAGGGAAGATGCTTAG 59.864 47.826 0.00 0.00 34.25 2.18
3033 3088 3.134804 GGTGCTTAGGGAAGATGCTTAGA 59.865 47.826 0.00 0.00 34.25 2.10
3034 3089 4.376146 GTGCTTAGGGAAGATGCTTAGAG 58.624 47.826 0.00 0.00 34.25 2.43
3035 3090 4.100189 GTGCTTAGGGAAGATGCTTAGAGA 59.900 45.833 0.00 0.00 34.25 3.10
3036 3091 4.716784 TGCTTAGGGAAGATGCTTAGAGAA 59.283 41.667 0.00 0.00 34.25 2.87
3037 3092 5.189736 TGCTTAGGGAAGATGCTTAGAGAAA 59.810 40.000 0.00 0.00 34.25 2.52
3038 3093 6.126652 TGCTTAGGGAAGATGCTTAGAGAAAT 60.127 38.462 0.00 0.00 34.25 2.17
3039 3094 7.071196 TGCTTAGGGAAGATGCTTAGAGAAATA 59.929 37.037 0.00 0.00 34.25 1.40
3040 3095 7.934120 GCTTAGGGAAGATGCTTAGAGAAATAA 59.066 37.037 0.00 0.00 34.25 1.40
3041 3096 9.838339 CTTAGGGAAGATGCTTAGAGAAATAAA 57.162 33.333 0.00 0.00 34.25 1.40
3043 3098 8.916628 AGGGAAGATGCTTAGAGAAATAAATC 57.083 34.615 0.00 0.00 0.00 2.17
3044 3099 8.497745 AGGGAAGATGCTTAGAGAAATAAATCA 58.502 33.333 0.00 0.00 0.00 2.57
3045 3100 9.125026 GGGAAGATGCTTAGAGAAATAAATCAA 57.875 33.333 0.00 0.00 0.00 2.57
3086 3141 9.776158 CTAGTGCTTATTTGTATAGGATAGACG 57.224 37.037 0.00 0.00 35.04 4.18
3087 3142 7.091443 AGTGCTTATTTGTATAGGATAGACGC 58.909 38.462 0.00 0.00 35.04 5.19
3088 3143 7.039644 AGTGCTTATTTGTATAGGATAGACGCT 60.040 37.037 0.00 0.00 35.04 5.07
3089 3144 7.599245 GTGCTTATTTGTATAGGATAGACGCTT 59.401 37.037 0.00 0.00 35.04 4.68
3090 3145 8.799367 TGCTTATTTGTATAGGATAGACGCTTA 58.201 33.333 0.00 0.00 35.04 3.09
3091 3146 9.635520 GCTTATTTGTATAGGATAGACGCTTAA 57.364 33.333 0.00 0.00 35.04 1.85
3108 3163 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
3109 3164 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
3110 3165 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
3111 3166 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
3112 3167 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
3113 3168 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
3114 3169 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
3115 3170 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
3116 3171 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
3117 3172 3.886505 AGCGTCTCTCCTGTAGAAATAGG 59.113 47.826 0.00 0.00 35.36 2.57
3118 3173 3.551250 GCGTCTCTCCTGTAGAAATAGGC 60.551 52.174 0.00 0.00 34.08 3.93
3119 3174 3.632604 CGTCTCTCCTGTAGAAATAGGCA 59.367 47.826 0.00 0.00 34.08 4.75
3120 3175 4.498345 CGTCTCTCCTGTAGAAATAGGCAC 60.498 50.000 0.00 0.00 34.08 5.01
3121 3176 3.961408 TCTCTCCTGTAGAAATAGGCACC 59.039 47.826 0.00 0.00 34.08 5.01
3122 3177 2.693591 TCTCCTGTAGAAATAGGCACCG 59.306 50.000 0.00 0.00 34.08 4.94
3123 3178 1.760613 TCCTGTAGAAATAGGCACCGG 59.239 52.381 0.00 0.00 34.08 5.28
3124 3179 1.485066 CCTGTAGAAATAGGCACCGGT 59.515 52.381 0.00 0.00 0.00 5.28
3125 3180 2.550978 CTGTAGAAATAGGCACCGGTG 58.449 52.381 30.66 30.66 0.00 4.94
3137 3192 2.119671 CACCGGTGCTTCAAGAAAAC 57.880 50.000 24.02 0.00 0.00 2.43
3138 3193 1.029681 ACCGGTGCTTCAAGAAAACC 58.970 50.000 6.12 4.89 0.00 3.27
3139 3194 0.313987 CCGGTGCTTCAAGAAAACCC 59.686 55.000 0.00 0.00 0.00 4.11
3140 3195 0.040425 CGGTGCTTCAAGAAAACCCG 60.040 55.000 0.00 4.75 0.00 5.28
3141 3196 0.313987 GGTGCTTCAAGAAAACCCGG 59.686 55.000 0.00 0.00 0.00 5.73
3142 3197 1.029681 GTGCTTCAAGAAAACCCGGT 58.970 50.000 0.00 0.00 0.00 5.28
3143 3198 1.407618 GTGCTTCAAGAAAACCCGGTT 59.592 47.619 0.00 0.00 0.00 4.44
3144 3199 2.104170 TGCTTCAAGAAAACCCGGTTT 58.896 42.857 9.92 9.92 37.34 3.27
3145 3200 3.067040 GTGCTTCAAGAAAACCCGGTTTA 59.933 43.478 16.03 0.00 34.43 2.01
3146 3201 3.892588 TGCTTCAAGAAAACCCGGTTTAT 59.107 39.130 16.03 5.49 34.43 1.40
3147 3202 4.342665 TGCTTCAAGAAAACCCGGTTTATT 59.657 37.500 16.03 11.05 34.43 1.40
3148 3203 5.163395 TGCTTCAAGAAAACCCGGTTTATTT 60.163 36.000 16.03 10.37 34.43 1.40
3149 3204 5.756347 GCTTCAAGAAAACCCGGTTTATTTT 59.244 36.000 16.03 8.09 34.43 1.82
3150 3205 6.259167 GCTTCAAGAAAACCCGGTTTATTTTT 59.741 34.615 16.03 0.00 34.43 1.94
3151 3206 7.517734 GCTTCAAGAAAACCCGGTTTATTTTTC 60.518 37.037 16.03 9.42 34.43 2.29
3152 3207 7.114866 TCAAGAAAACCCGGTTTATTTTTCT 57.885 32.000 16.03 11.46 45.73 2.52
3153 3208 8.235359 TCAAGAAAACCCGGTTTATTTTTCTA 57.765 30.769 16.03 0.00 43.97 2.10
3154 3209 8.693625 TCAAGAAAACCCGGTTTATTTTTCTAA 58.306 29.630 16.03 4.75 43.97 2.10
3155 3210 8.974408 CAAGAAAACCCGGTTTATTTTTCTAAG 58.026 33.333 16.03 7.54 43.97 2.18
3156 3211 7.149973 AGAAAACCCGGTTTATTTTTCTAAGC 58.850 34.615 16.03 2.14 43.30 3.09
3157 3212 6.408107 AAACCCGGTTTATTTTTCTAAGCA 57.592 33.333 14.16 0.00 33.70 3.91
3158 3213 6.599356 AACCCGGTTTATTTTTCTAAGCAT 57.401 33.333 0.00 0.00 0.00 3.79
3159 3214 6.203808 ACCCGGTTTATTTTTCTAAGCATC 57.796 37.500 0.00 0.00 0.00 3.91
3160 3215 5.949952 ACCCGGTTTATTTTTCTAAGCATCT 59.050 36.000 0.00 0.00 0.00 2.90
3161 3216 6.095021 ACCCGGTTTATTTTTCTAAGCATCTC 59.905 38.462 0.00 0.00 0.00 2.75
3162 3217 6.318900 CCCGGTTTATTTTTCTAAGCATCTCT 59.681 38.462 0.00 0.00 0.00 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.999712 GAGAGGGGGATTTGGTGGAA 59.000 55.000 0.00 0.00 0.00 3.53
2 3 0.121197 AGAGAGGGGGATTTGGTGGA 59.879 55.000 0.00 0.00 0.00 4.02
3 4 0.548510 GAGAGAGGGGGATTTGGTGG 59.451 60.000 0.00 0.00 0.00 4.61
4 5 0.548510 GGAGAGAGGGGGATTTGGTG 59.451 60.000 0.00 0.00 0.00 4.17
5 6 0.624795 GGGAGAGAGGGGGATTTGGT 60.625 60.000 0.00 0.00 0.00 3.67
6 7 0.327964 AGGGAGAGAGGGGGATTTGG 60.328 60.000 0.00 0.00 0.00 3.28
7 8 1.492599 GAAGGGAGAGAGGGGGATTTG 59.507 57.143 0.00 0.00 0.00 2.32
8 9 1.629464 GGAAGGGAGAGAGGGGGATTT 60.629 57.143 0.00 0.00 0.00 2.17
9 10 0.029577 GGAAGGGAGAGAGGGGGATT 60.030 60.000 0.00 0.00 0.00 3.01
10 11 1.238896 TGGAAGGGAGAGAGGGGGAT 61.239 60.000 0.00 0.00 0.00 3.85
11 12 1.460839 TTGGAAGGGAGAGAGGGGGA 61.461 60.000 0.00 0.00 0.00 4.81
12 13 1.082954 TTGGAAGGGAGAGAGGGGG 59.917 63.158 0.00 0.00 0.00 5.40
13 14 0.547712 TGTTGGAAGGGAGAGAGGGG 60.548 60.000 0.00 0.00 0.00 4.79
14 15 1.589414 ATGTTGGAAGGGAGAGAGGG 58.411 55.000 0.00 0.00 0.00 4.30
15 16 4.410228 TGATAATGTTGGAAGGGAGAGAGG 59.590 45.833 0.00 0.00 0.00 3.69
16 17 5.620738 TGATAATGTTGGAAGGGAGAGAG 57.379 43.478 0.00 0.00 0.00 3.20
17 18 6.359804 CATTGATAATGTTGGAAGGGAGAGA 58.640 40.000 0.00 0.00 34.18 3.10
18 19 5.533903 CCATTGATAATGTTGGAAGGGAGAG 59.466 44.000 0.00 0.00 37.18 3.20
19 20 5.448654 CCATTGATAATGTTGGAAGGGAGA 58.551 41.667 0.00 0.00 37.18 3.71
20 21 4.038402 GCCATTGATAATGTTGGAAGGGAG 59.962 45.833 0.00 0.00 37.18 4.30
21 22 3.960102 GCCATTGATAATGTTGGAAGGGA 59.040 43.478 0.00 0.00 37.18 4.20
22 23 3.070015 GGCCATTGATAATGTTGGAAGGG 59.930 47.826 0.00 0.00 37.18 3.95
23 24 3.705579 TGGCCATTGATAATGTTGGAAGG 59.294 43.478 0.00 0.00 37.18 3.46
24 25 4.403432 AGTGGCCATTGATAATGTTGGAAG 59.597 41.667 9.72 0.00 37.18 3.46
25 26 4.160065 CAGTGGCCATTGATAATGTTGGAA 59.840 41.667 23.14 0.00 37.18 3.53
26 27 3.700539 CAGTGGCCATTGATAATGTTGGA 59.299 43.478 23.14 0.00 37.18 3.53
27 28 3.700539 TCAGTGGCCATTGATAATGTTGG 59.299 43.478 25.75 0.00 37.18 3.77
28 29 4.987408 TCAGTGGCCATTGATAATGTTG 57.013 40.909 25.75 0.00 37.18 3.33
29 30 4.342951 CCATCAGTGGCCATTGATAATGTT 59.657 41.667 35.24 16.99 39.01 2.71
30 31 3.893200 CCATCAGTGGCCATTGATAATGT 59.107 43.478 35.24 17.67 39.01 2.71
31 32 3.257375 CCCATCAGTGGCCATTGATAATG 59.743 47.826 35.24 26.59 44.62 1.90
32 33 3.503365 CCCATCAGTGGCCATTGATAAT 58.497 45.455 35.24 18.36 44.62 1.28
33 34 2.948115 CCCATCAGTGGCCATTGATAA 58.052 47.619 35.24 15.86 44.62 1.75
34 35 1.479205 GCCCATCAGTGGCCATTGATA 60.479 52.381 35.24 16.56 44.62 2.15
35 36 0.757935 GCCCATCAGTGGCCATTGAT 60.758 55.000 31.94 31.94 44.62 2.57
36 37 1.380246 GCCCATCAGTGGCCATTGA 60.380 57.895 30.49 30.49 44.62 2.57
37 38 3.213264 GCCCATCAGTGGCCATTG 58.787 61.111 21.69 21.69 44.62 2.82
42 43 7.193972 ATAGAATTTCTAAGCCCATCAGTGGC 61.194 42.308 10.07 0.00 38.79 5.01
43 44 4.530875 AGAATTTCTAAGCCCATCAGTGG 58.469 43.478 0.00 0.00 45.61 4.00
44 45 6.994496 TGATAGAATTTCTAAGCCCATCAGTG 59.006 38.462 10.07 0.00 31.96 3.66
45 46 7.071698 TCTGATAGAATTTCTAAGCCCATCAGT 59.928 37.037 22.24 2.95 35.34 3.41
46 47 7.387397 GTCTGATAGAATTTCTAAGCCCATCAG 59.613 40.741 19.55 19.55 35.22 2.90
47 48 7.147497 TGTCTGATAGAATTTCTAAGCCCATCA 60.147 37.037 10.07 8.26 31.96 3.07
48 49 7.172361 GTGTCTGATAGAATTTCTAAGCCCATC 59.828 40.741 10.07 4.34 31.96 3.51
49 50 6.995091 GTGTCTGATAGAATTTCTAAGCCCAT 59.005 38.462 10.07 0.00 31.96 4.00
50 51 6.349300 GTGTCTGATAGAATTTCTAAGCCCA 58.651 40.000 10.07 5.86 31.96 5.36
51 52 5.760743 GGTGTCTGATAGAATTTCTAAGCCC 59.239 44.000 10.07 2.74 31.96 5.19
52 53 6.349300 TGGTGTCTGATAGAATTTCTAAGCC 58.651 40.000 10.07 4.16 31.96 4.35
53 54 7.712639 TGATGGTGTCTGATAGAATTTCTAAGC 59.287 37.037 10.07 6.49 31.96 3.09
54 55 9.775854 ATGATGGTGTCTGATAGAATTTCTAAG 57.224 33.333 10.07 4.80 31.96 2.18
59 60 9.293404 CCAATATGATGGTGTCTGATAGAATTT 57.707 33.333 0.00 0.00 35.65 1.82
60 61 7.392673 GCCAATATGATGGTGTCTGATAGAATT 59.607 37.037 1.16 0.00 42.75 2.17
61 62 6.883217 GCCAATATGATGGTGTCTGATAGAAT 59.117 38.462 1.16 0.00 42.75 2.40
62 63 6.233434 GCCAATATGATGGTGTCTGATAGAA 58.767 40.000 1.16 0.00 42.75 2.10
63 64 5.280164 GGCCAATATGATGGTGTCTGATAGA 60.280 44.000 0.00 0.00 42.75 1.98
64 65 4.940046 GGCCAATATGATGGTGTCTGATAG 59.060 45.833 0.00 0.00 42.75 2.08
65 66 4.563374 CGGCCAATATGATGGTGTCTGATA 60.563 45.833 2.24 0.00 42.75 2.15
66 67 3.759581 GGCCAATATGATGGTGTCTGAT 58.240 45.455 0.00 0.00 42.75 2.90
67 68 2.485302 CGGCCAATATGATGGTGTCTGA 60.485 50.000 2.24 0.00 42.75 3.27
68 69 1.875514 CGGCCAATATGATGGTGTCTG 59.124 52.381 2.24 0.00 42.75 3.51
69 70 1.815408 GCGGCCAATATGATGGTGTCT 60.815 52.381 2.24 0.00 42.75 3.41
70 71 0.593128 GCGGCCAATATGATGGTGTC 59.407 55.000 2.24 0.00 42.75 3.67
71 72 1.165907 CGCGGCCAATATGATGGTGT 61.166 55.000 2.24 0.00 42.75 4.16
72 73 1.165907 ACGCGGCCAATATGATGGTG 61.166 55.000 12.47 0.00 42.75 4.17
73 74 0.465460 AACGCGGCCAATATGATGGT 60.465 50.000 12.47 0.00 42.75 3.55
74 75 1.518325 TAACGCGGCCAATATGATGG 58.482 50.000 12.47 0.00 43.70 3.51
75 76 4.570369 TCATATAACGCGGCCAATATGATG 59.430 41.667 20.97 9.66 36.75 3.07
76 77 4.765273 TCATATAACGCGGCCAATATGAT 58.235 39.130 20.97 0.00 36.75 2.45
77 78 4.195225 TCATATAACGCGGCCAATATGA 57.805 40.909 20.97 20.97 38.41 2.15
78 79 4.937696 TTCATATAACGCGGCCAATATG 57.062 40.909 12.47 16.49 34.86 1.78
79 80 4.201910 GCATTCATATAACGCGGCCAATAT 60.202 41.667 12.47 5.04 0.00 1.28
80 81 3.126171 GCATTCATATAACGCGGCCAATA 59.874 43.478 12.47 2.63 0.00 1.90
81 82 2.095263 GCATTCATATAACGCGGCCAAT 60.095 45.455 12.47 0.07 0.00 3.16
82 83 1.265635 GCATTCATATAACGCGGCCAA 59.734 47.619 12.47 0.00 0.00 4.52
83 84 0.871722 GCATTCATATAACGCGGCCA 59.128 50.000 12.47 0.00 0.00 5.36
84 85 0.871722 TGCATTCATATAACGCGGCC 59.128 50.000 12.47 0.00 0.00 6.13
85 86 2.900122 ATGCATTCATATAACGCGGC 57.100 45.000 12.47 0.00 0.00 6.53
86 87 5.276240 TGTAATGCATTCATATAACGCGG 57.724 39.130 16.86 0.00 31.46 6.46
87 88 7.014702 TCAATGTAATGCATTCATATAACGCG 58.985 34.615 16.86 3.53 45.33 6.01
88 89 8.900511 ATCAATGTAATGCATTCATATAACGC 57.099 30.769 16.86 0.00 45.33 4.84
118 119 9.008965 GCCATTGATAACACCATGTAATATACA 57.991 33.333 0.00 0.00 43.80 2.29
119 120 8.458843 GGCCATTGATAACACCATGTAATATAC 58.541 37.037 0.00 0.00 0.00 1.47
120 121 8.166726 TGGCCATTGATAACACCATGTAATATA 58.833 33.333 0.00 0.00 0.00 0.86
121 122 7.009550 TGGCCATTGATAACACCATGTAATAT 58.990 34.615 0.00 0.00 0.00 1.28
122 123 6.368805 TGGCCATTGATAACACCATGTAATA 58.631 36.000 0.00 0.00 0.00 0.98
123 124 5.207354 TGGCCATTGATAACACCATGTAAT 58.793 37.500 0.00 0.00 0.00 1.89
124 125 4.604156 TGGCCATTGATAACACCATGTAA 58.396 39.130 0.00 0.00 0.00 2.41
125 126 4.242336 TGGCCATTGATAACACCATGTA 57.758 40.909 0.00 0.00 0.00 2.29
126 127 3.098774 TGGCCATTGATAACACCATGT 57.901 42.857 0.00 0.00 0.00 3.21
127 128 4.099727 TCATTGGCCATTGATAACACCATG 59.900 41.667 23.27 11.93 0.00 3.66
128 129 4.288398 TCATTGGCCATTGATAACACCAT 58.712 39.130 23.27 0.00 0.00 3.55
129 130 3.700539 CTCATTGGCCATTGATAACACCA 59.299 43.478 26.25 6.10 0.00 4.17
130 131 3.491447 GCTCATTGGCCATTGATAACACC 60.491 47.826 26.25 10.33 0.00 4.16
131 132 3.130869 TGCTCATTGGCCATTGATAACAC 59.869 43.478 26.25 15.49 0.00 3.32
132 133 3.363627 TGCTCATTGGCCATTGATAACA 58.636 40.909 26.25 21.26 0.00 2.41
133 134 3.797865 GCTGCTCATTGGCCATTGATAAC 60.798 47.826 26.25 19.41 0.00 1.89
134 135 2.363038 GCTGCTCATTGGCCATTGATAA 59.637 45.455 26.25 17.54 0.00 1.75
135 136 1.958579 GCTGCTCATTGGCCATTGATA 59.041 47.619 26.25 18.24 0.00 2.15
136 137 0.750850 GCTGCTCATTGGCCATTGAT 59.249 50.000 26.25 6.69 0.00 2.57
137 138 0.323999 AGCTGCTCATTGGCCATTGA 60.324 50.000 24.89 24.89 0.00 2.57
138 139 0.535335 AAGCTGCTCATTGGCCATTG 59.465 50.000 19.55 19.55 0.00 2.82
139 140 2.029623 CTAAGCTGCTCATTGGCCATT 58.970 47.619 6.09 0.00 0.00 3.16
140 141 1.213678 TCTAAGCTGCTCATTGGCCAT 59.786 47.619 6.09 0.00 0.00 4.40
141 142 0.620030 TCTAAGCTGCTCATTGGCCA 59.380 50.000 0.00 0.00 0.00 5.36
142 143 1.755179 TTCTAAGCTGCTCATTGGCC 58.245 50.000 1.00 0.00 0.00 5.36
143 144 4.097589 AGAATTTCTAAGCTGCTCATTGGC 59.902 41.667 1.00 0.00 0.00 4.52
144 145 5.831702 AGAATTTCTAAGCTGCTCATTGG 57.168 39.130 1.00 0.00 0.00 3.16
145 146 6.541641 AGGTAGAATTTCTAAGCTGCTCATTG 59.458 38.462 1.00 0.00 29.58 2.82
146 147 6.541641 CAGGTAGAATTTCTAAGCTGCTCATT 59.458 38.462 1.00 0.00 29.58 2.57
147 148 6.054295 CAGGTAGAATTTCTAAGCTGCTCAT 58.946 40.000 1.00 0.00 29.58 2.90
148 149 5.187772 TCAGGTAGAATTTCTAAGCTGCTCA 59.812 40.000 19.34 0.00 37.38 4.26
149 150 5.522097 GTCAGGTAGAATTTCTAAGCTGCTC 59.478 44.000 19.34 14.46 37.38 4.26
150 151 5.423886 GTCAGGTAGAATTTCTAAGCTGCT 58.576 41.667 19.34 0.00 37.38 4.24
151 152 4.268884 CGTCAGGTAGAATTTCTAAGCTGC 59.731 45.833 19.34 15.68 37.38 5.25
152 153 4.268884 GCGTCAGGTAGAATTTCTAAGCTG 59.731 45.833 18.69 18.69 38.49 4.24
153 154 4.434520 GCGTCAGGTAGAATTTCTAAGCT 58.565 43.478 7.70 5.11 29.58 3.74
154 155 3.556365 GGCGTCAGGTAGAATTTCTAAGC 59.444 47.826 7.70 2.20 29.58 3.09
155 156 4.755411 TGGCGTCAGGTAGAATTTCTAAG 58.245 43.478 7.70 2.38 29.58 2.18
156 157 4.811969 TGGCGTCAGGTAGAATTTCTAA 57.188 40.909 7.70 0.00 29.58 2.10
157 158 5.128827 AGAATGGCGTCAGGTAGAATTTCTA 59.871 40.000 0.00 1.90 0.00 2.10
158 159 3.914426 ATGGCGTCAGGTAGAATTTCT 57.086 42.857 4.03 4.03 0.00 2.52
159 160 4.192317 AGAATGGCGTCAGGTAGAATTTC 58.808 43.478 0.00 0.00 0.00 2.17
160 161 4.222124 AGAATGGCGTCAGGTAGAATTT 57.778 40.909 0.00 0.00 0.00 1.82
161 162 3.914426 AGAATGGCGTCAGGTAGAATT 57.086 42.857 0.00 0.00 0.00 2.17
162 163 6.859112 ATATAGAATGGCGTCAGGTAGAAT 57.141 37.500 0.00 0.00 0.00 2.40
163 164 6.152323 GGTATATAGAATGGCGTCAGGTAGAA 59.848 42.308 0.00 0.00 0.00 2.10
164 165 5.651139 GGTATATAGAATGGCGTCAGGTAGA 59.349 44.000 0.00 0.00 0.00 2.59
165 166 5.448768 CGGTATATAGAATGGCGTCAGGTAG 60.449 48.000 0.00 0.00 0.00 3.18
166 167 4.397103 CGGTATATAGAATGGCGTCAGGTA 59.603 45.833 0.00 0.00 0.00 3.08
167 168 3.192844 CGGTATATAGAATGGCGTCAGGT 59.807 47.826 0.00 0.00 0.00 4.00
168 169 3.192844 ACGGTATATAGAATGGCGTCAGG 59.807 47.826 0.00 0.00 0.00 3.86
169 170 4.166523 CACGGTATATAGAATGGCGTCAG 58.833 47.826 0.00 0.00 0.00 3.51
170 171 3.570975 ACACGGTATATAGAATGGCGTCA 59.429 43.478 0.00 0.00 0.00 4.35
171 172 4.170292 ACACGGTATATAGAATGGCGTC 57.830 45.455 0.00 0.00 0.00 5.19
172 173 4.595762 AACACGGTATATAGAATGGCGT 57.404 40.909 0.00 0.00 0.00 5.68
173 174 8.132995 TCATATAACACGGTATATAGAATGGCG 58.867 37.037 0.00 0.00 0.00 5.69
174 175 9.811995 TTCATATAACACGGTATATAGAATGGC 57.188 33.333 0.00 0.00 0.00 4.40
182 183 9.448438 ACAATGCATTCATATAACACGGTATAT 57.552 29.630 9.53 0.00 31.46 0.86
183 184 8.716909 CACAATGCATTCATATAACACGGTATA 58.283 33.333 9.53 0.00 31.46 1.47
184 185 7.228507 ACACAATGCATTCATATAACACGGTAT 59.771 33.333 9.53 0.00 31.46 2.73
185 186 6.540551 ACACAATGCATTCATATAACACGGTA 59.459 34.615 9.53 0.00 31.46 4.02
186 187 5.356751 ACACAATGCATTCATATAACACGGT 59.643 36.000 9.53 0.00 31.46 4.83
187 188 5.820131 ACACAATGCATTCATATAACACGG 58.180 37.500 9.53 0.00 31.46 4.94
188 189 6.966066 TCAACACAATGCATTCATATAACACG 59.034 34.615 9.53 0.00 31.46 4.49
189 190 8.748582 CATCAACACAATGCATTCATATAACAC 58.251 33.333 9.53 0.00 31.46 3.32
190 191 8.468399 ACATCAACACAATGCATTCATATAACA 58.532 29.630 9.53 0.00 31.46 2.41
191 192 8.861033 ACATCAACACAATGCATTCATATAAC 57.139 30.769 9.53 0.00 31.46 1.89
194 195 9.471084 CATTACATCAACACAATGCATTCATAT 57.529 29.630 9.53 0.00 31.46 1.78
195 196 8.468399 ACATTACATCAACACAATGCATTCATA 58.532 29.630 9.53 0.00 32.76 2.15
196 197 7.324935 ACATTACATCAACACAATGCATTCAT 58.675 30.769 9.53 0.00 32.76 2.57
197 198 6.689554 ACATTACATCAACACAATGCATTCA 58.310 32.000 9.53 0.00 32.76 2.57
198 199 8.861033 ATACATTACATCAACACAATGCATTC 57.139 30.769 9.53 0.00 32.76 2.67
201 202 9.118300 TGATATACATTACATCAACACAATGCA 57.882 29.630 0.00 0.00 32.76 3.96
202 203 9.385902 GTGATATACATTACATCAACACAATGC 57.614 33.333 0.00 0.00 32.76 3.56
219 220 7.174772 GCCATTGATAACACCATGTGATATACA 59.825 37.037 0.49 0.00 44.87 2.29
220 221 7.362056 GGCCATTGATAACACCATGTGATATAC 60.362 40.741 0.00 0.00 32.97 1.47
221 222 6.658816 GGCCATTGATAACACCATGTGATATA 59.341 38.462 0.00 0.00 32.97 0.86
222 223 5.477984 GGCCATTGATAACACCATGTGATAT 59.522 40.000 0.00 0.00 34.94 1.63
223 224 4.826733 GGCCATTGATAACACCATGTGATA 59.173 41.667 0.00 0.00 36.96 2.15
224 225 3.638160 GGCCATTGATAACACCATGTGAT 59.362 43.478 0.00 0.00 36.96 3.06
225 226 3.023119 GGCCATTGATAACACCATGTGA 58.977 45.455 0.00 0.00 36.96 3.58
226 227 2.759535 TGGCCATTGATAACACCATGTG 59.240 45.455 0.00 0.00 39.75 3.21
227 228 3.098774 TGGCCATTGATAACACCATGT 57.901 42.857 0.00 0.00 0.00 3.21
228 229 4.099727 TCATTGGCCATTGATAACACCATG 59.900 41.667 23.27 11.93 0.00 3.66
229 230 4.288398 TCATTGGCCATTGATAACACCAT 58.712 39.130 23.27 0.00 0.00 3.55
230 231 3.700539 CTCATTGGCCATTGATAACACCA 59.299 43.478 26.25 6.10 0.00 4.17
231 232 3.491447 GCTCATTGGCCATTGATAACACC 60.491 47.826 26.25 10.33 0.00 4.16
232 233 3.130869 TGCTCATTGGCCATTGATAACAC 59.869 43.478 26.25 15.49 0.00 3.32
233 234 3.363627 TGCTCATTGGCCATTGATAACA 58.636 40.909 26.25 21.26 0.00 2.41
234 235 3.797865 GCTGCTCATTGGCCATTGATAAC 60.798 47.826 26.25 19.41 0.00 1.89
235 236 2.363038 GCTGCTCATTGGCCATTGATAA 59.637 45.455 26.25 17.54 0.00 1.75
236 237 1.958579 GCTGCTCATTGGCCATTGATA 59.041 47.619 26.25 18.24 0.00 2.15
237 238 0.750850 GCTGCTCATTGGCCATTGAT 59.249 50.000 26.25 6.69 0.00 2.57
238 239 0.323999 AGCTGCTCATTGGCCATTGA 60.324 50.000 24.89 24.89 0.00 2.57
239 240 0.535335 AAGCTGCTCATTGGCCATTG 59.465 50.000 19.55 19.55 0.00 2.82
240 241 2.029623 CTAAGCTGCTCATTGGCCATT 58.970 47.619 6.09 0.00 0.00 3.16
241 242 1.213678 TCTAAGCTGCTCATTGGCCAT 59.786 47.619 6.09 0.00 0.00 4.40
242 243 0.620030 TCTAAGCTGCTCATTGGCCA 59.380 50.000 0.00 0.00 0.00 5.36
243 244 1.755179 TTCTAAGCTGCTCATTGGCC 58.245 50.000 1.00 0.00 0.00 5.36
244 245 4.097589 AGAATTTCTAAGCTGCTCATTGGC 59.902 41.667 1.00 0.00 0.00 4.52
245 246 5.831702 AGAATTTCTAAGCTGCTCATTGG 57.168 39.130 1.00 0.00 0.00 3.16
246 247 6.541641 AGGTAGAATTTCTAAGCTGCTCATTG 59.458 38.462 1.00 0.00 29.58 2.82
247 248 6.541641 CAGGTAGAATTTCTAAGCTGCTCATT 59.458 38.462 1.00 0.00 29.58 2.57
248 249 6.054295 CAGGTAGAATTTCTAAGCTGCTCAT 58.946 40.000 1.00 0.00 29.58 2.90
249 250 5.187772 TCAGGTAGAATTTCTAAGCTGCTCA 59.812 40.000 19.34 0.00 37.38 4.26
250 251 5.522097 GTCAGGTAGAATTTCTAAGCTGCTC 59.478 44.000 19.34 14.46 37.38 4.26
251 252 5.423886 GTCAGGTAGAATTTCTAAGCTGCT 58.576 41.667 19.34 0.00 37.38 4.24
252 253 4.268884 CGTCAGGTAGAATTTCTAAGCTGC 59.731 45.833 19.34 15.68 37.38 5.25
253 254 4.268884 GCGTCAGGTAGAATTTCTAAGCTG 59.731 45.833 18.69 18.69 38.49 4.24
254 255 4.081642 TGCGTCAGGTAGAATTTCTAAGCT 60.082 41.667 7.70 5.11 29.58 3.74
255 256 4.181578 TGCGTCAGGTAGAATTTCTAAGC 58.818 43.478 7.70 2.94 29.58 3.09
256 257 6.042777 TGATGCGTCAGGTAGAATTTCTAAG 58.957 40.000 3.97 2.38 29.58 2.18
257 258 5.972935 TGATGCGTCAGGTAGAATTTCTAA 58.027 37.500 3.97 0.00 29.58 2.10
258 259 5.592104 TGATGCGTCAGGTAGAATTTCTA 57.408 39.130 3.97 1.90 0.00 2.10
259 260 4.471904 TGATGCGTCAGGTAGAATTTCT 57.528 40.909 3.97 4.03 0.00 2.52
260 261 6.870965 AGATATGATGCGTCAGGTAGAATTTC 59.129 38.462 15.04 0.83 37.87 2.17
261 262 6.648310 CAGATATGATGCGTCAGGTAGAATTT 59.352 38.462 15.04 0.00 37.87 1.82
262 263 6.162079 CAGATATGATGCGTCAGGTAGAATT 58.838 40.000 15.04 0.00 37.87 2.17
263 264 5.337089 CCAGATATGATGCGTCAGGTAGAAT 60.337 44.000 15.04 0.00 37.87 2.40
264 265 4.021981 CCAGATATGATGCGTCAGGTAGAA 60.022 45.833 15.04 0.00 37.87 2.10
265 266 3.507622 CCAGATATGATGCGTCAGGTAGA 59.492 47.826 15.04 0.00 37.87 2.59
266 267 3.842820 CCAGATATGATGCGTCAGGTAG 58.157 50.000 15.04 3.33 37.87 3.18
267 268 2.029020 GCCAGATATGATGCGTCAGGTA 60.029 50.000 15.04 3.20 37.87 3.08
268 269 1.270518 GCCAGATATGATGCGTCAGGT 60.271 52.381 15.04 5.16 37.87 4.00
269 270 1.436600 GCCAGATATGATGCGTCAGG 58.563 55.000 15.04 10.49 37.87 3.86
270 271 1.066136 CGCCAGATATGATGCGTCAG 58.934 55.000 15.04 0.43 41.95 3.51
271 272 3.199764 CGCCAGATATGATGCGTCA 57.800 52.632 11.83 11.83 41.95 4.35
275 276 1.605710 ACAAAGCGCCAGATATGATGC 59.394 47.619 2.29 0.00 0.00 3.91
276 277 3.120889 CGTACAAAGCGCCAGATATGATG 60.121 47.826 2.29 0.00 0.00 3.07
277 278 3.059884 CGTACAAAGCGCCAGATATGAT 58.940 45.455 2.29 0.00 0.00 2.45
278 279 2.100087 TCGTACAAAGCGCCAGATATGA 59.900 45.455 2.29 0.08 0.00 2.15
279 280 2.469826 TCGTACAAAGCGCCAGATATG 58.530 47.619 2.29 0.00 0.00 1.78
280 281 2.882927 TCGTACAAAGCGCCAGATAT 57.117 45.000 2.29 0.00 0.00 1.63
281 282 2.658373 TTCGTACAAAGCGCCAGATA 57.342 45.000 2.29 0.00 0.00 1.98
282 283 1.665679 CATTCGTACAAAGCGCCAGAT 59.334 47.619 2.29 0.00 0.00 2.90
283 284 1.075542 CATTCGTACAAAGCGCCAGA 58.924 50.000 2.29 0.00 0.00 3.86
284 285 0.796312 ACATTCGTACAAAGCGCCAG 59.204 50.000 2.29 0.00 0.00 4.85
285 286 0.515127 CACATTCGTACAAAGCGCCA 59.485 50.000 2.29 0.00 0.00 5.69
286 287 0.515564 ACACATTCGTACAAAGCGCC 59.484 50.000 2.29 0.00 0.00 6.53
287 288 1.591248 CACACATTCGTACAAAGCGC 58.409 50.000 0.00 0.00 0.00 5.92
288 289 1.591248 GCACACATTCGTACAAAGCG 58.409 50.000 0.00 0.00 0.00 4.68
289 290 1.070175 ACGCACACATTCGTACAAAGC 60.070 47.619 0.00 0.00 37.14 3.51
290 291 2.941891 ACGCACACATTCGTACAAAG 57.058 45.000 0.00 0.00 37.14 2.77
291 292 2.608090 TCAACGCACACATTCGTACAAA 59.392 40.909 0.00 0.00 38.03 2.83
292 293 2.202566 TCAACGCACACATTCGTACAA 58.797 42.857 0.00 0.00 38.03 2.41
293 294 1.854227 TCAACGCACACATTCGTACA 58.146 45.000 0.00 0.00 38.03 2.90
294 295 4.772046 ATATCAACGCACACATTCGTAC 57.228 40.909 0.00 0.00 38.03 3.67
295 296 6.477360 ACAATATATCAACGCACACATTCGTA 59.523 34.615 0.00 0.00 38.03 3.43
296 297 5.293324 ACAATATATCAACGCACACATTCGT 59.707 36.000 0.00 0.00 41.06 3.85
297 298 5.737353 ACAATATATCAACGCACACATTCG 58.263 37.500 0.00 0.00 0.00 3.34
298 299 7.851508 AGTACAATATATCAACGCACACATTC 58.148 34.615 0.00 0.00 0.00 2.67
299 300 7.042051 GGAGTACAATATATCAACGCACACATT 60.042 37.037 0.00 0.00 0.00 2.71
300 301 6.423905 GGAGTACAATATATCAACGCACACAT 59.576 38.462 0.00 0.00 0.00 3.21
301 302 5.751509 GGAGTACAATATATCAACGCACACA 59.248 40.000 0.00 0.00 0.00 3.72
302 303 5.176958 GGGAGTACAATATATCAACGCACAC 59.823 44.000 0.00 0.00 0.00 3.82
303 304 5.069914 AGGGAGTACAATATATCAACGCACA 59.930 40.000 0.00 0.00 0.00 4.57
304 305 5.539048 AGGGAGTACAATATATCAACGCAC 58.461 41.667 0.00 0.00 0.00 5.34
305 306 5.279306 GGAGGGAGTACAATATATCAACGCA 60.279 44.000 0.00 0.00 0.00 5.24
306 307 5.169295 GGAGGGAGTACAATATATCAACGC 58.831 45.833 0.00 0.00 0.00 4.84
307 308 5.048224 ACGGAGGGAGTACAATATATCAACG 60.048 44.000 0.00 0.00 0.00 4.10
308 309 6.342338 ACGGAGGGAGTACAATATATCAAC 57.658 41.667 0.00 0.00 0.00 3.18
309 310 8.362639 GTTTACGGAGGGAGTACAATATATCAA 58.637 37.037 0.00 0.00 0.00 2.57
310 311 7.727186 AGTTTACGGAGGGAGTACAATATATCA 59.273 37.037 0.00 0.00 0.00 2.15
311 312 8.120140 AGTTTACGGAGGGAGTACAATATATC 57.880 38.462 0.00 0.00 0.00 1.63
312 313 9.592196 TTAGTTTACGGAGGGAGTACAATATAT 57.408 33.333 0.00 0.00 0.00 0.86
313 314 8.995027 TTAGTTTACGGAGGGAGTACAATATA 57.005 34.615 0.00 0.00 0.00 0.86
314 315 7.902920 TTAGTTTACGGAGGGAGTACAATAT 57.097 36.000 0.00 0.00 0.00 1.28
315 316 7.902920 ATTAGTTTACGGAGGGAGTACAATA 57.097 36.000 0.00 0.00 0.00 1.90
316 317 6.803366 ATTAGTTTACGGAGGGAGTACAAT 57.197 37.500 0.00 0.00 0.00 2.71
317 318 7.560991 TCATATTAGTTTACGGAGGGAGTACAA 59.439 37.037 0.00 0.00 0.00 2.41
318 319 7.062322 TCATATTAGTTTACGGAGGGAGTACA 58.938 38.462 0.00 0.00 0.00 2.90
319 320 7.516198 TCATATTAGTTTACGGAGGGAGTAC 57.484 40.000 0.00 0.00 0.00 2.73
320 321 6.208204 GCTCATATTAGTTTACGGAGGGAGTA 59.792 42.308 0.00 0.00 0.00 2.59
321 322 5.010820 GCTCATATTAGTTTACGGAGGGAGT 59.989 44.000 0.00 0.00 0.00 3.85
322 323 5.471257 GCTCATATTAGTTTACGGAGGGAG 58.529 45.833 0.00 0.00 0.00 4.30
323 324 4.022589 CGCTCATATTAGTTTACGGAGGGA 60.023 45.833 0.00 0.00 36.36 4.20
324 325 4.235360 CGCTCATATTAGTTTACGGAGGG 58.765 47.826 0.00 0.00 0.00 4.30
325 326 4.868067 ACGCTCATATTAGTTTACGGAGG 58.132 43.478 0.00 0.00 0.00 4.30
326 327 6.823678 AAACGCTCATATTAGTTTACGGAG 57.176 37.500 0.00 0.00 35.36 4.63
327 328 7.706159 TCTAAACGCTCATATTAGTTTACGGA 58.294 34.615 0.00 0.00 37.83 4.69
328 329 7.919313 TCTAAACGCTCATATTAGTTTACGG 57.081 36.000 0.00 0.00 37.83 4.02
373 374 9.841295 TCCCTCTGTAAATTAATATAAAAGCGT 57.159 29.630 0.00 0.00 0.00 5.07
386 387 9.950496 CTATGCAATATACTCCCTCTGTAAATT 57.050 33.333 0.00 0.00 0.00 1.82
387 388 9.105844 ACTATGCAATATACTCCCTCTGTAAAT 57.894 33.333 0.00 0.00 0.00 1.40
388 389 8.367911 CACTATGCAATATACTCCCTCTGTAAA 58.632 37.037 0.00 0.00 0.00 2.01
389 390 7.509318 ACACTATGCAATATACTCCCTCTGTAA 59.491 37.037 0.00 0.00 0.00 2.41
390 391 7.010771 ACACTATGCAATATACTCCCTCTGTA 58.989 38.462 0.00 0.00 0.00 2.74
391 392 5.841237 ACACTATGCAATATACTCCCTCTGT 59.159 40.000 0.00 0.00 0.00 3.41
392 393 6.352016 ACACTATGCAATATACTCCCTCTG 57.648 41.667 0.00 0.00 0.00 3.35
393 394 8.535335 CATAACACTATGCAATATACTCCCTCT 58.465 37.037 0.00 0.00 0.00 3.69
394 395 7.766278 CCATAACACTATGCAATATACTCCCTC 59.234 40.741 0.00 0.00 34.62 4.30
395 396 7.311297 CCCATAACACTATGCAATATACTCCCT 60.311 40.741 0.00 0.00 34.62 4.20
396 397 6.823689 CCCATAACACTATGCAATATACTCCC 59.176 42.308 0.00 0.00 34.62 4.30
397 398 7.334421 CACCCATAACACTATGCAATATACTCC 59.666 40.741 0.00 0.00 34.62 3.85
398 399 7.334421 CCACCCATAACACTATGCAATATACTC 59.666 40.741 0.00 0.00 34.62 2.59
399 400 7.168219 CCACCCATAACACTATGCAATATACT 58.832 38.462 0.00 0.00 34.62 2.12
400 401 6.128007 GCCACCCATAACACTATGCAATATAC 60.128 42.308 0.00 0.00 34.62 1.47
407 408 1.318576 GGCCACCCATAACACTATGC 58.681 55.000 0.00 0.00 34.62 3.14
420 421 4.211502 GGATGCGCATTGGCCACC 62.212 66.667 26.12 16.02 36.38 4.61
421 422 1.789078 CTAGGATGCGCATTGGCCAC 61.789 60.000 26.12 10.28 36.38 5.01
424 425 1.151668 CTACTAGGATGCGCATTGGC 58.848 55.000 26.12 11.90 0.00 4.52
456 457 9.439500 TTCTACCGTGTAAATTATTTGCTTACT 57.561 29.630 7.25 0.00 0.00 2.24
578 582 9.288576 CAAGAGAAAATATACTCATTGCCCATA 57.711 33.333 0.00 0.00 35.83 2.74
582 586 7.269477 AGCAAGAGAAAATATACTCATTGCC 57.731 36.000 20.67 12.77 41.78 4.52
584 588 8.674263 AGGAGCAAGAGAAAATATACTCATTG 57.326 34.615 0.00 0.00 35.83 2.82
585 589 7.936301 GGAGGAGCAAGAGAAAATATACTCATT 59.064 37.037 0.00 0.00 35.83 2.57
586 590 7.071698 TGGAGGAGCAAGAGAAAATATACTCAT 59.928 37.037 0.00 0.00 35.83 2.90
587 591 6.384015 TGGAGGAGCAAGAGAAAATATACTCA 59.616 38.462 0.00 0.00 35.83 3.41
589 593 6.814954 TGGAGGAGCAAGAGAAAATATACT 57.185 37.500 0.00 0.00 0.00 2.12
699 712 1.675720 GAGAGAGTGAGAGGCCAGGC 61.676 65.000 5.01 1.26 0.00 4.85
704 717 1.326951 GGGGTGAGAGAGTGAGAGGC 61.327 65.000 0.00 0.00 0.00 4.70
736 749 0.185175 GGTCCCCACTTGACTTTGGT 59.815 55.000 0.00 0.00 33.22 3.67
738 751 1.956477 CAAGGTCCCCACTTGACTTTG 59.044 52.381 0.00 0.00 46.27 2.77
813 826 0.916845 AAAAGGAGGAGAGAGGGGGC 60.917 60.000 0.00 0.00 0.00 5.80
867 880 2.856988 GTGGTGGTGGGGAAGGGA 60.857 66.667 0.00 0.00 0.00 4.20
868 881 3.979497 GGTGGTGGTGGGGAAGGG 61.979 72.222 0.00 0.00 0.00 3.95
869 882 2.499303 GATGGTGGTGGTGGGGAAGG 62.499 65.000 0.00 0.00 0.00 3.46
870 883 1.000896 GATGGTGGTGGTGGGGAAG 60.001 63.158 0.00 0.00 0.00 3.46
871 884 1.465188 AGATGGTGGTGGTGGGGAA 60.465 57.895 0.00 0.00 0.00 3.97
980 998 2.754658 TCGGCCTCTCTCGGGTTC 60.755 66.667 0.00 0.00 0.00 3.62
981 999 3.069318 GTCGGCCTCTCTCGGGTT 61.069 66.667 0.00 0.00 0.00 4.11
984 1002 2.835431 ATGGTCGGCCTCTCTCGG 60.835 66.667 7.97 0.00 35.27 4.63
1210 1232 4.162690 GGTAGCAGAGCCCCCGTG 62.163 72.222 0.00 0.00 0.00 4.94
1225 1253 3.126225 GGAGAGCTCGTCGACGGT 61.126 66.667 35.05 21.23 40.29 4.83
1862 1899 4.117661 GCCGCCGACGACTCTTCT 62.118 66.667 0.00 0.00 43.93 2.85
2011 2048 2.225791 CTTCTCGACGTCCATGGGCA 62.226 60.000 18.31 0.00 0.00 5.36
2241 2278 0.457853 TTTCTACTGCTACCGCTGCG 60.458 55.000 16.34 16.34 38.51 5.18
2285 2322 2.109774 AGATGCTCTCTTCCACCTCTG 58.890 52.381 0.00 0.00 0.00 3.35
2470 2507 7.137426 CCAAACATGTCAAGAAAGAAGAAGAG 58.863 38.462 0.00 0.00 0.00 2.85
2575 2617 3.562973 GCAACTGGGACTGTATCATGATG 59.437 47.826 18.72 4.21 40.38 3.07
2576 2618 3.200605 TGCAACTGGGACTGTATCATGAT 59.799 43.478 13.81 13.81 40.38 2.45
2577 2619 2.571202 TGCAACTGGGACTGTATCATGA 59.429 45.455 0.00 0.00 40.38 3.07
2578 2620 2.679837 GTGCAACTGGGACTGTATCATG 59.320 50.000 0.00 0.00 40.38 3.07
2579 2621 2.356125 GGTGCAACTGGGACTGTATCAT 60.356 50.000 0.00 0.00 40.38 2.45
2580 2622 1.003118 GGTGCAACTGGGACTGTATCA 59.997 52.381 0.00 0.00 40.38 2.15
2611 2653 3.054361 TCCCTTTATCTCACCTTCTTGCC 60.054 47.826 0.00 0.00 0.00 4.52
2657 2704 0.538057 CACACCATGCACCAACTCCT 60.538 55.000 0.00 0.00 0.00 3.69
2691 2738 2.498167 CACACAGTGAAAGGGAAGAGG 58.502 52.381 7.81 0.00 35.23 3.69
2897 2945 6.968263 TCCAAAGAAACCAACATCACATTA 57.032 33.333 0.00 0.00 0.00 1.90
2899 2947 5.786311 CATCCAAAGAAACCAACATCACAT 58.214 37.500 0.00 0.00 0.00 3.21
2901 2949 3.989817 GCATCCAAAGAAACCAACATCAC 59.010 43.478 0.00 0.00 0.00 3.06
2902 2950 3.896888 AGCATCCAAAGAAACCAACATCA 59.103 39.130 0.00 0.00 0.00 3.07
2922 2977 1.021390 ACGCCATGTACTTCAGCAGC 61.021 55.000 0.00 0.00 0.00 5.25
2926 2981 5.143916 GAATTACACGCCATGTACTTCAG 57.856 43.478 15.47 0.00 45.83 3.02
2946 3001 5.975693 AAAGCCGATGTTTTCATTAGGAA 57.024 34.783 0.00 0.00 41.05 3.36
2951 3006 3.987220 CCGAAAAAGCCGATGTTTTCATT 59.013 39.130 13.90 0.00 41.67 2.57
2959 3014 0.793861 TTCGACCGAAAAAGCCGATG 59.206 50.000 2.02 0.00 0.00 3.84
2962 3017 0.515564 ACATTCGACCGAAAAAGCCG 59.484 50.000 8.97 0.00 37.69 5.52
2964 3019 1.533731 TCCACATTCGACCGAAAAAGC 59.466 47.619 8.97 0.00 37.69 3.51
2975 3030 7.872993 ACAAGACCTTATATACATCCACATTCG 59.127 37.037 0.00 0.00 0.00 3.34
2991 3046 4.019681 CACCTCCCATTGTACAAGACCTTA 60.020 45.833 14.65 0.00 0.00 2.69
2992 3047 2.986728 ACCTCCCATTGTACAAGACCTT 59.013 45.455 14.65 0.00 0.00 3.50
2993 3048 2.305927 CACCTCCCATTGTACAAGACCT 59.694 50.000 14.65 0.00 0.00 3.85
2994 3049 2.711542 CACCTCCCATTGTACAAGACC 58.288 52.381 14.65 0.00 0.00 3.85
2995 3050 2.084546 GCACCTCCCATTGTACAAGAC 58.915 52.381 14.65 0.00 0.00 3.01
2996 3051 1.985159 AGCACCTCCCATTGTACAAGA 59.015 47.619 14.65 5.23 0.00 3.02
2997 3052 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
2998 3053 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
2999 3054 2.238646 CCTAAGCACCTCCCATTGTACA 59.761 50.000 0.00 0.00 0.00 2.90
3000 3055 2.421529 CCCTAAGCACCTCCCATTGTAC 60.422 54.545 0.00 0.00 0.00 2.90
3001 3056 1.843851 CCCTAAGCACCTCCCATTGTA 59.156 52.381 0.00 0.00 0.00 2.41
3002 3057 0.625849 CCCTAAGCACCTCCCATTGT 59.374 55.000 0.00 0.00 0.00 2.71
3003 3058 0.918983 TCCCTAAGCACCTCCCATTG 59.081 55.000 0.00 0.00 0.00 2.82
3004 3059 1.566231 CTTCCCTAAGCACCTCCCATT 59.434 52.381 0.00 0.00 0.00 3.16
3005 3060 1.216990 CTTCCCTAAGCACCTCCCAT 58.783 55.000 0.00 0.00 0.00 4.00
3006 3061 0.118346 TCTTCCCTAAGCACCTCCCA 59.882 55.000 0.00 0.00 32.36 4.37
3007 3062 1.141858 CATCTTCCCTAAGCACCTCCC 59.858 57.143 0.00 0.00 32.36 4.30
3008 3063 1.475930 GCATCTTCCCTAAGCACCTCC 60.476 57.143 0.00 0.00 32.36 4.30
3009 3064 1.488393 AGCATCTTCCCTAAGCACCTC 59.512 52.381 0.00 0.00 32.36 3.85
3010 3065 1.589414 AGCATCTTCCCTAAGCACCT 58.411 50.000 0.00 0.00 32.36 4.00
3011 3066 2.426842 AAGCATCTTCCCTAAGCACC 57.573 50.000 0.00 0.00 32.36 5.01
3012 3067 4.100189 TCTCTAAGCATCTTCCCTAAGCAC 59.900 45.833 0.00 0.00 32.36 4.40
3013 3068 4.290093 TCTCTAAGCATCTTCCCTAAGCA 58.710 43.478 0.00 0.00 32.36 3.91
3014 3069 4.946478 TCTCTAAGCATCTTCCCTAAGC 57.054 45.455 0.00 0.00 32.36 3.09
3015 3070 9.838339 TTTATTTCTCTAAGCATCTTCCCTAAG 57.162 33.333 0.00 0.00 0.00 2.18
3018 3073 8.497745 TGATTTATTTCTCTAAGCATCTTCCCT 58.502 33.333 0.00 0.00 0.00 4.20
3019 3074 8.682936 TGATTTATTTCTCTAAGCATCTTCCC 57.317 34.615 0.00 0.00 0.00 3.97
3060 3115 9.776158 CGTCTATCCTATACAAATAAGCACTAG 57.224 37.037 0.00 0.00 0.00 2.57
3061 3116 8.242053 GCGTCTATCCTATACAAATAAGCACTA 58.758 37.037 0.00 0.00 0.00 2.74
3062 3117 7.039644 AGCGTCTATCCTATACAAATAAGCACT 60.040 37.037 0.00 0.00 0.00 4.40
3063 3118 7.091443 AGCGTCTATCCTATACAAATAAGCAC 58.909 38.462 0.00 0.00 0.00 4.40
3064 3119 7.228314 AGCGTCTATCCTATACAAATAAGCA 57.772 36.000 0.00 0.00 0.00 3.91
3065 3120 9.635520 TTAAGCGTCTATCCTATACAAATAAGC 57.364 33.333 0.00 0.00 0.00 3.09
3086 3141 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
3087 3142 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
3088 3143 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
3089 3144 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
3090 3145 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
3091 3146 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
3092 3147 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
3093 3148 5.531659 CCTATTTCTACAGGAGAGACGCTTA 59.468 44.000 0.00 0.00 34.93 3.09
3094 3149 4.339814 CCTATTTCTACAGGAGAGACGCTT 59.660 45.833 0.00 0.00 34.93 4.68
3095 3150 3.886505 CCTATTTCTACAGGAGAGACGCT 59.113 47.826 0.00 0.00 34.93 5.07
3096 3151 3.551250 GCCTATTTCTACAGGAGAGACGC 60.551 52.174 0.00 0.00 34.93 5.19
3097 3152 3.632604 TGCCTATTTCTACAGGAGAGACG 59.367 47.826 0.00 0.00 34.93 4.18
3098 3153 4.202172 GGTGCCTATTTCTACAGGAGAGAC 60.202 50.000 0.00 0.00 34.93 3.36
3099 3154 3.961408 GGTGCCTATTTCTACAGGAGAGA 59.039 47.826 0.00 0.00 34.93 3.10
3100 3155 3.243569 CGGTGCCTATTTCTACAGGAGAG 60.244 52.174 0.00 0.00 34.93 3.20
3101 3156 2.693591 CGGTGCCTATTTCTACAGGAGA 59.306 50.000 0.00 0.00 33.42 3.71
3102 3157 2.224066 CCGGTGCCTATTTCTACAGGAG 60.224 54.545 0.00 0.00 33.42 3.69
3103 3158 1.760613 CCGGTGCCTATTTCTACAGGA 59.239 52.381 0.00 0.00 33.42 3.86
3104 3159 1.485066 ACCGGTGCCTATTTCTACAGG 59.515 52.381 6.12 0.00 35.04 4.00
3105 3160 2.550978 CACCGGTGCCTATTTCTACAG 58.449 52.381 24.02 0.00 0.00 2.74
3106 3161 2.684001 CACCGGTGCCTATTTCTACA 57.316 50.000 24.02 0.00 0.00 2.74
3118 3173 1.269051 GGTTTTCTTGAAGCACCGGTG 60.269 52.381 30.66 30.66 0.00 4.94
3119 3174 1.029681 GGTTTTCTTGAAGCACCGGT 58.970 50.000 0.00 0.00 0.00 5.28
3120 3175 0.313987 GGGTTTTCTTGAAGCACCGG 59.686 55.000 0.00 0.00 0.00 5.28
3121 3176 0.040425 CGGGTTTTCTTGAAGCACCG 60.040 55.000 0.00 0.00 0.00 4.94
3122 3177 0.313987 CCGGGTTTTCTTGAAGCACC 59.686 55.000 0.00 5.65 0.00 5.01
3123 3178 1.029681 ACCGGGTTTTCTTGAAGCAC 58.970 50.000 6.32 0.00 0.00 4.40
3124 3179 1.770294 AACCGGGTTTTCTTGAAGCA 58.230 45.000 6.59 0.00 0.00 3.91
3125 3180 2.882927 AAACCGGGTTTTCTTGAAGC 57.117 45.000 19.22 0.00 31.10 3.86
3126 3181 7.709182 AGAAAAATAAACCGGGTTTTCTTGAAG 59.291 33.333 28.50 0.00 44.08 3.02
3127 3182 7.557724 AGAAAAATAAACCGGGTTTTCTTGAA 58.442 30.769 28.50 11.38 44.08 2.69
3128 3183 7.114866 AGAAAAATAAACCGGGTTTTCTTGA 57.885 32.000 28.50 12.10 44.08 3.02
3129 3184 8.874744 TTAGAAAAATAAACCGGGTTTTCTTG 57.125 30.769 28.50 0.00 44.08 3.02
3130 3185 7.654520 GCTTAGAAAAATAAACCGGGTTTTCTT 59.345 33.333 28.50 19.13 44.08 2.52
3131 3186 7.149973 GCTTAGAAAAATAAACCGGGTTTTCT 58.850 34.615 28.50 24.24 46.62 2.52
3132 3187 6.924612 TGCTTAGAAAAATAAACCGGGTTTTC 59.075 34.615 28.50 19.21 39.28 2.29
3133 3188 6.818233 TGCTTAGAAAAATAAACCGGGTTTT 58.182 32.000 28.50 11.74 37.01 2.43
3134 3189 6.408107 TGCTTAGAAAAATAAACCGGGTTT 57.592 33.333 26.79 26.79 39.24 3.27
3135 3190 6.436218 AGATGCTTAGAAAAATAAACCGGGTT 59.564 34.615 10.96 10.96 0.00 4.11
3136 3191 5.949952 AGATGCTTAGAAAAATAAACCGGGT 59.050 36.000 6.32 0.00 0.00 5.28
3137 3192 6.318900 AGAGATGCTTAGAAAAATAAACCGGG 59.681 38.462 6.32 0.00 0.00 5.73
3138 3193 7.321745 AGAGATGCTTAGAAAAATAAACCGG 57.678 36.000 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.