Multiple sequence alignment - TraesCS7B01G235500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G235500 chr7B 100.000 2549 0 0 1 2549 439855105 439857653 0.000000e+00 4708.0
1 TraesCS7B01G235500 chr7B 88.078 411 31 8 2051 2461 439883308 439883700 2.970000e-129 472.0
2 TraesCS7B01G235500 chr7B 88.855 332 15 4 1 311 192020357 192020687 3.080000e-104 388.0
3 TraesCS7B01G235500 chr7B 84.634 410 30 12 1 401 697610754 697611139 6.660000e-101 377.0
4 TraesCS7B01G235500 chr7D 91.935 992 60 14 725 1704 422684274 422685257 0.000000e+00 1371.0
5 TraesCS7B01G235500 chr7D 85.918 561 64 6 1758 2308 422685253 422685808 3.650000e-163 584.0
6 TraesCS7B01G235500 chr7D 95.890 146 3 2 857 1002 422683477 422683619 1.520000e-57 233.0
7 TraesCS7B01G235500 chr7D 90.411 146 14 0 2304 2449 422715540 422715685 2.590000e-45 193.0
8 TraesCS7B01G235500 chr7A 88.033 961 51 32 857 1796 510471014 510470097 0.000000e+00 1079.0
9 TraesCS7B01G235500 chr7A 91.667 48 3 1 2383 2429 439569499 439569452 5.890000e-07 65.8
10 TraesCS7B01G235500 chr4B 89.549 421 24 8 1 401 380898010 380897590 1.350000e-142 516.0
11 TraesCS7B01G235500 chr2B 91.453 351 23 6 1 350 685006171 685005827 2.290000e-130 475.0
12 TraesCS7B01G235500 chr2B 87.828 419 29 4 4 401 57911937 57911520 2.970000e-129 472.0
13 TraesCS7B01G235500 chr2B 87.681 414 35 8 1 400 777298852 777299263 3.840000e-128 468.0
14 TraesCS7B01G235500 chr2B 76.768 198 39 5 1910 2104 21957129 21957322 1.250000e-18 104.0
15 TraesCS7B01G235500 chr5B 87.406 397 45 5 4 399 23866971 23866579 3.870000e-123 451.0
16 TraesCS7B01G235500 chr5B 89.669 242 17 8 1 238 439426790 439427027 4.120000e-78 302.0
17 TraesCS7B01G235500 chr5B 80.822 365 57 12 2175 2533 576215931 576215574 8.980000e-70 274.0
18 TraesCS7B01G235500 chr5B 75.325 308 61 12 2228 2531 466211615 466211911 1.590000e-27 134.0
19 TraesCS7B01G235500 chr5B 92.405 79 6 0 2022 2100 242193490 242193412 2.070000e-21 113.0
20 TraesCS7B01G235500 chr5B 89.610 77 8 0 2024 2100 237820570 237820646 5.800000e-17 99.0
21 TraesCS7B01G235500 chr4A 80.780 359 63 4 2177 2531 726698805 726699161 2.500000e-70 276.0
22 TraesCS7B01G235500 chr3D 79.896 383 72 5 2155 2533 365101789 365102170 2.500000e-70 276.0
23 TraesCS7B01G235500 chr3D 81.423 253 37 7 484 727 20795052 20795303 5.560000e-47 198.0
24 TraesCS7B01G235500 chr3D 79.825 114 22 1 1992 2104 134822450 134822337 5.840000e-12 82.4
25 TraesCS7B01G235500 chr2D 82.508 303 50 3 2175 2475 461331929 461331628 1.940000e-66 263.0
26 TraesCS7B01G235500 chr4D 84.836 244 31 5 488 726 455263189 455263431 9.110000e-60 241.0
27 TraesCS7B01G235500 chr4D 91.803 61 5 0 2252 2312 136438871 136438931 4.520000e-13 86.1
28 TraesCS7B01G235500 chr6A 81.590 239 36 6 488 721 198070411 198070646 9.310000e-45 191.0
29 TraesCS7B01G235500 chr6A 78.523 149 27 5 1970 2117 139502630 139502774 2.700000e-15 93.5
30 TraesCS7B01G235500 chr1A 82.609 207 29 6 524 725 515760808 515760604 2.610000e-40 176.0
31 TraesCS7B01G235500 chr6D 89.691 97 10 0 632 728 151954418 151954514 9.580000e-25 124.0
32 TraesCS7B01G235500 chr6D 93.443 61 4 0 2252 2312 260373469 260373529 9.710000e-15 91.6
33 TraesCS7B01G235500 chr2A 77.155 232 39 11 1869 2091 726271627 726271401 3.440000e-24 122.0
34 TraesCS7B01G235500 chr1D 83.168 101 13 3 2037 2137 403490217 403490121 3.490000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G235500 chr7B 439855105 439857653 2548 False 4708.000000 4708 100.000000 1 2549 1 chr7B.!!$F2 2548
1 TraesCS7B01G235500 chr7D 422683477 422685808 2331 False 729.333333 1371 91.247667 725 2308 3 chr7D.!!$F2 1583
2 TraesCS7B01G235500 chr7A 510470097 510471014 917 True 1079.000000 1079 88.033000 857 1796 1 chr7A.!!$R2 939

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
575 576 0.030638 CTTTTGTCCAGCCGGTTGTG 59.969 55.0 17.69 8.85 0.0 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2339 2451 0.034477 CCCCGCTCACCAGGTAAAAT 60.034 55.0 0.0 0.0 0.0 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
227 228 9.708092 TCATCAAATTGAAAATAAGTTCATGCA 57.292 25.926 0.00 0.00 37.36 3.96
274 275 3.262135 GTTTGAAGGAAACATTCGCGA 57.738 42.857 3.71 3.71 43.16 5.87
275 276 3.623863 GTTTGAAGGAAACATTCGCGAA 58.376 40.909 25.66 25.66 43.16 4.70
276 277 4.226761 GTTTGAAGGAAACATTCGCGAAT 58.773 39.130 27.94 27.94 43.16 3.34
277 278 4.497473 TTGAAGGAAACATTCGCGAATT 57.503 36.364 30.71 18.35 0.00 2.17
278 279 3.820689 TGAAGGAAACATTCGCGAATTG 58.179 40.909 30.71 25.29 0.00 2.32
282 283 2.728839 GGAAACATTCGCGAATTGCAAA 59.271 40.909 30.71 3.89 46.97 3.68
283 284 3.183373 GGAAACATTCGCGAATTGCAAAA 59.817 39.130 30.71 3.02 46.97 2.44
285 286 4.373532 AACATTCGCGAATTGCAAAAAG 57.626 36.364 30.71 18.83 46.97 2.27
286 287 2.730928 ACATTCGCGAATTGCAAAAAGG 59.269 40.909 30.71 18.15 46.97 3.11
289 290 3.085443 TCGCGAATTGCAAAAAGGAAA 57.915 38.095 6.20 0.00 46.97 3.13
290 291 3.448686 TCGCGAATTGCAAAAAGGAAAA 58.551 36.364 6.20 0.00 46.97 2.29
291 292 3.865745 TCGCGAATTGCAAAAAGGAAAAA 59.134 34.783 6.20 0.00 46.97 1.94
293 294 4.526625 GCGAATTGCAAAAAGGAAAAAGG 58.473 39.130 1.71 0.00 45.45 3.11
294 295 4.554526 GCGAATTGCAAAAAGGAAAAAGGG 60.555 41.667 1.71 0.00 45.45 3.95
296 297 5.277297 CGAATTGCAAAAAGGAAAAAGGGAC 60.277 40.000 1.71 0.00 0.00 4.46
297 298 4.559862 TTGCAAAAAGGAAAAAGGGACA 57.440 36.364 0.00 0.00 0.00 4.02
298 299 4.135747 TGCAAAAAGGAAAAAGGGACAG 57.864 40.909 0.00 0.00 0.00 3.51
299 300 3.772025 TGCAAAAAGGAAAAAGGGACAGA 59.228 39.130 0.00 0.00 0.00 3.41
300 301 4.141959 TGCAAAAAGGAAAAAGGGACAGAG 60.142 41.667 0.00 0.00 0.00 3.35
301 302 4.099419 GCAAAAAGGAAAAAGGGACAGAGA 59.901 41.667 0.00 0.00 0.00 3.10
304 305 6.867519 AAAAGGAAAAAGGGACAGAGAAAA 57.132 33.333 0.00 0.00 0.00 2.29
305 306 6.867519 AAAGGAAAAAGGGACAGAGAAAAA 57.132 33.333 0.00 0.00 0.00 1.94
363 364 9.884465 AAAAGAGAAGAAACATTTATCTGAACG 57.116 29.630 0.00 0.00 0.00 3.95
364 365 7.066374 AGAGAAGAAACATTTATCTGAACGC 57.934 36.000 0.00 0.00 0.00 4.84
365 366 6.650807 AGAGAAGAAACATTTATCTGAACGCA 59.349 34.615 0.00 0.00 0.00 5.24
368 369 6.801539 AGAAACATTTATCTGAACGCAAGA 57.198 33.333 0.00 0.00 43.62 3.02
371 372 5.551760 ACATTTATCTGAACGCAAGAAGG 57.448 39.130 0.00 0.00 43.62 3.46
372 373 5.003804 ACATTTATCTGAACGCAAGAAGGT 58.996 37.500 0.00 0.00 43.62 3.50
373 374 5.106555 ACATTTATCTGAACGCAAGAAGGTG 60.107 40.000 0.00 0.00 43.62 4.00
374 375 2.550830 ATCTGAACGCAAGAAGGTGT 57.449 45.000 0.00 0.00 43.62 4.16
375 376 1.581934 TCTGAACGCAAGAAGGTGTG 58.418 50.000 0.00 0.00 43.62 3.82
376 377 0.588252 CTGAACGCAAGAAGGTGTGG 59.412 55.000 0.00 0.00 43.62 4.17
377 378 0.107410 TGAACGCAAGAAGGTGTGGT 60.107 50.000 0.00 0.00 43.62 4.16
378 379 1.021968 GAACGCAAGAAGGTGTGGTT 58.978 50.000 0.00 0.00 43.62 3.67
379 380 0.738389 AACGCAAGAAGGTGTGGTTG 59.262 50.000 0.00 0.00 43.62 3.77
380 381 1.008538 CGCAAGAAGGTGTGGTTGC 60.009 57.895 0.00 0.00 41.55 4.17
381 382 1.363807 GCAAGAAGGTGTGGTTGCC 59.636 57.895 0.00 0.00 39.52 4.52
382 383 1.654220 CAAGAAGGTGTGGTTGCCG 59.346 57.895 0.00 0.00 0.00 5.69
383 384 0.817634 CAAGAAGGTGTGGTTGCCGA 60.818 55.000 0.00 0.00 0.00 5.54
384 385 0.535102 AAGAAGGTGTGGTTGCCGAG 60.535 55.000 0.00 0.00 0.00 4.63
385 386 1.227853 GAAGGTGTGGTTGCCGAGT 60.228 57.895 0.00 0.00 0.00 4.18
386 387 1.507141 GAAGGTGTGGTTGCCGAGTG 61.507 60.000 0.00 0.00 0.00 3.51
387 388 2.958578 AAGGTGTGGTTGCCGAGTGG 62.959 60.000 0.00 0.00 38.77 4.00
388 389 2.203153 GTGTGGTTGCCGAGTGGT 60.203 61.111 0.00 0.00 37.67 4.16
390 391 0.533308 GTGTGGTTGCCGAGTGGTTA 60.533 55.000 0.00 0.00 37.67 2.85
391 392 0.250124 TGTGGTTGCCGAGTGGTTAG 60.250 55.000 0.00 0.00 37.67 2.34
392 393 0.250166 GTGGTTGCCGAGTGGTTAGT 60.250 55.000 0.00 0.00 37.67 2.24
393 394 0.250124 TGGTTGCCGAGTGGTTAGTG 60.250 55.000 0.00 0.00 37.67 2.74
394 395 1.574702 GGTTGCCGAGTGGTTAGTGC 61.575 60.000 0.00 0.00 37.67 4.40
395 396 1.302192 TTGCCGAGTGGTTAGTGCC 60.302 57.895 0.00 0.00 37.67 5.01
396 397 2.436115 GCCGAGTGGTTAGTGCCC 60.436 66.667 0.00 0.00 37.67 5.36
397 398 2.267961 CCGAGTGGTTAGTGCCCC 59.732 66.667 0.00 0.00 0.00 5.80
399 400 1.218316 CGAGTGGTTAGTGCCCCTC 59.782 63.158 0.00 0.00 0.00 4.30
400 401 1.541310 CGAGTGGTTAGTGCCCCTCA 61.541 60.000 0.00 0.00 0.00 3.86
401 402 0.036294 GAGTGGTTAGTGCCCCTCAC 60.036 60.000 0.00 0.00 45.98 3.51
408 409 2.586792 GTGCCCCTCACAGCCTAG 59.413 66.667 0.00 0.00 44.98 3.02
409 410 2.122729 TGCCCCTCACAGCCTAGT 59.877 61.111 0.00 0.00 0.00 2.57
411 412 3.082579 GCCCCTCACAGCCTAGTCG 62.083 68.421 0.00 0.00 0.00 4.18
412 413 2.496817 CCCTCACAGCCTAGTCGC 59.503 66.667 0.00 0.00 0.00 5.19
413 414 2.055042 CCCTCACAGCCTAGTCGCT 61.055 63.158 0.00 0.00 40.65 4.93
414 415 0.752009 CCCTCACAGCCTAGTCGCTA 60.752 60.000 0.00 0.00 36.82 4.26
416 417 1.683917 CCTCACAGCCTAGTCGCTAAT 59.316 52.381 0.00 0.00 36.82 1.73
418 419 3.318275 CCTCACAGCCTAGTCGCTAATTA 59.682 47.826 0.00 0.00 36.82 1.40
420 421 3.697542 TCACAGCCTAGTCGCTAATTACA 59.302 43.478 0.00 0.00 36.82 2.41
421 422 3.797256 CACAGCCTAGTCGCTAATTACAC 59.203 47.826 0.00 0.00 36.82 2.90
422 423 3.043586 CAGCCTAGTCGCTAATTACACG 58.956 50.000 0.00 0.00 36.82 4.49
427 428 1.542544 GTCGCTAATTACACGACGCT 58.457 50.000 16.29 0.00 45.52 5.07
428 429 1.916000 GTCGCTAATTACACGACGCTT 59.084 47.619 16.29 0.00 45.52 4.68
429 430 2.035921 GTCGCTAATTACACGACGCTTC 60.036 50.000 16.29 0.08 45.52 3.86
430 431 2.159476 TCGCTAATTACACGACGCTTCT 60.159 45.455 0.00 0.00 0.00 2.85
432 433 3.176708 GCTAATTACACGACGCTTCTGA 58.823 45.455 0.00 0.00 0.00 3.27
434 435 4.267928 GCTAATTACACGACGCTTCTGAAT 59.732 41.667 0.00 0.00 0.00 2.57
435 436 5.457799 GCTAATTACACGACGCTTCTGAATA 59.542 40.000 0.00 0.00 0.00 1.75
437 438 6.715344 AATTACACGACGCTTCTGAATAAA 57.285 33.333 0.00 0.00 0.00 1.40
438 439 6.903883 ATTACACGACGCTTCTGAATAAAT 57.096 33.333 0.00 0.00 0.00 1.40
439 440 4.842139 ACACGACGCTTCTGAATAAATC 57.158 40.909 0.00 0.00 0.00 2.17
440 441 4.242475 ACACGACGCTTCTGAATAAATCA 58.758 39.130 0.00 0.00 36.38 2.57
442 443 5.005779 ACACGACGCTTCTGAATAAATCATC 59.994 40.000 0.00 0.00 37.44 2.92
443 444 4.207224 ACGACGCTTCTGAATAAATCATCG 59.793 41.667 0.00 0.00 38.43 3.84
444 445 4.441087 CGACGCTTCTGAATAAATCATCGA 59.559 41.667 0.00 0.00 35.92 3.59
445 446 5.117745 CGACGCTTCTGAATAAATCATCGAT 59.882 40.000 0.00 0.00 35.92 3.59
449 450 7.128331 CGCTTCTGAATAAATCATCGATTGTT 58.872 34.615 0.00 0.00 37.44 2.83
451 452 9.591404 GCTTCTGAATAAATCATCGATTGTTAG 57.409 33.333 0.00 0.00 37.44 2.34
453 454 8.607441 TCTGAATAAATCATCGATTGTTAGGG 57.393 34.615 0.00 0.00 37.44 3.53
454 455 7.661437 TCTGAATAAATCATCGATTGTTAGGGG 59.339 37.037 0.00 0.00 37.44 4.79
455 456 6.714810 TGAATAAATCATCGATTGTTAGGGGG 59.285 38.462 0.00 0.00 32.14 5.40
456 457 4.519906 AAATCATCGATTGTTAGGGGGT 57.480 40.909 0.00 0.00 32.14 4.95
457 458 3.771577 ATCATCGATTGTTAGGGGGTC 57.228 47.619 0.00 0.00 0.00 4.46
458 459 2.473070 TCATCGATTGTTAGGGGGTCA 58.527 47.619 0.00 0.00 0.00 4.02
459 460 2.434336 TCATCGATTGTTAGGGGGTCAG 59.566 50.000 0.00 0.00 0.00 3.51
460 461 1.200519 TCGATTGTTAGGGGGTCAGG 58.799 55.000 0.00 0.00 0.00 3.86
496 497 2.038813 TCCGCCACTGGGAGATGA 59.961 61.111 0.00 0.00 35.76 2.92
497 498 1.383109 TCCGCCACTGGGAGATGAT 60.383 57.895 0.00 0.00 35.76 2.45
498 499 0.105709 TCCGCCACTGGGAGATGATA 60.106 55.000 0.00 0.00 35.76 2.15
499 500 0.979665 CCGCCACTGGGAGATGATAT 59.020 55.000 0.00 0.00 35.76 1.63
500 501 1.066573 CCGCCACTGGGAGATGATATC 60.067 57.143 0.00 0.00 35.76 1.63
501 502 1.620323 CGCCACTGGGAGATGATATCA 59.380 52.381 8.10 8.10 35.76 2.15
502 503 2.611473 CGCCACTGGGAGATGATATCAC 60.611 54.545 7.78 2.47 35.76 3.06
503 504 2.611473 GCCACTGGGAGATGATATCACG 60.611 54.545 7.78 0.00 35.59 4.35
504 505 2.630098 CCACTGGGAGATGATATCACGT 59.370 50.000 7.78 0.00 35.59 4.49
505 506 3.553715 CCACTGGGAGATGATATCACGTG 60.554 52.174 9.94 9.94 35.59 4.49
506 507 2.036475 ACTGGGAGATGATATCACGTGC 59.964 50.000 11.67 3.35 0.00 5.34
507 508 2.298446 CTGGGAGATGATATCACGTGCT 59.702 50.000 11.67 3.26 0.00 4.40
508 509 3.496331 TGGGAGATGATATCACGTGCTA 58.504 45.455 11.67 6.04 0.00 3.49
509 510 4.089361 TGGGAGATGATATCACGTGCTAT 58.911 43.478 11.67 11.59 0.00 2.97
510 511 5.261216 TGGGAGATGATATCACGTGCTATA 58.739 41.667 11.67 4.95 0.00 1.31
512 513 6.381133 TGGGAGATGATATCACGTGCTATATT 59.619 38.462 11.67 2.03 0.00 1.28
513 514 6.920758 GGGAGATGATATCACGTGCTATATTC 59.079 42.308 11.67 11.05 0.00 1.75
514 515 7.416777 GGGAGATGATATCACGTGCTATATTCA 60.417 40.741 11.67 7.15 0.00 2.57
515 516 7.976175 GGAGATGATATCACGTGCTATATTCAA 59.024 37.037 11.67 1.50 0.00 2.69
516 517 9.526713 GAGATGATATCACGTGCTATATTCAAT 57.473 33.333 11.67 5.87 0.00 2.57
517 518 9.526713 AGATGATATCACGTGCTATATTCAATC 57.473 33.333 11.67 13.06 0.00 2.67
518 519 9.526713 GATGATATCACGTGCTATATTCAATCT 57.473 33.333 11.67 0.00 0.00 2.40
520 521 9.143631 TGATATCACGTGCTATATTCAATCTTG 57.856 33.333 11.67 0.00 0.00 3.02
521 522 9.358872 GATATCACGTGCTATATTCAATCTTGA 57.641 33.333 11.67 0.00 34.92 3.02
522 523 6.828502 TCACGTGCTATATTCAATCTTGAC 57.171 37.500 11.67 0.00 36.83 3.18
524 525 6.476706 TCACGTGCTATATTCAATCTTGACTG 59.523 38.462 11.67 0.00 36.83 3.51
527 528 6.345329 CGTGCTATATTCAATCTTGACTGACG 60.345 42.308 0.00 0.00 36.83 4.35
528 529 5.985530 TGCTATATTCAATCTTGACTGACGG 59.014 40.000 0.00 0.00 36.83 4.79
529 530 5.986135 GCTATATTCAATCTTGACTGACGGT 59.014 40.000 0.00 0.00 36.83 4.83
530 531 6.144724 GCTATATTCAATCTTGACTGACGGTC 59.855 42.308 7.52 7.52 44.70 4.79
540 541 3.687572 GACTGACGGTCGCTAATAAGA 57.312 47.619 3.34 0.00 35.07 2.10
542 543 5.354054 GACTGACGGTCGCTAATAAGATA 57.646 43.478 3.34 0.00 35.07 1.98
543 544 5.755813 GACTGACGGTCGCTAATAAGATAA 58.244 41.667 3.34 0.00 35.07 1.75
544 545 5.759963 ACTGACGGTCGCTAATAAGATAAG 58.240 41.667 3.34 0.00 0.00 1.73
545 546 5.298777 ACTGACGGTCGCTAATAAGATAAGT 59.701 40.000 3.34 0.00 0.00 2.24
546 547 5.755813 TGACGGTCGCTAATAAGATAAGTC 58.244 41.667 3.34 0.00 0.00 3.01
547 548 5.118642 ACGGTCGCTAATAAGATAAGTCC 57.881 43.478 0.00 0.00 0.00 3.85
548 549 4.826183 ACGGTCGCTAATAAGATAAGTCCT 59.174 41.667 0.00 0.00 0.00 3.85
549 550 5.301298 ACGGTCGCTAATAAGATAAGTCCTT 59.699 40.000 0.00 0.00 0.00 3.36
550 551 6.488006 ACGGTCGCTAATAAGATAAGTCCTTA 59.512 38.462 0.00 0.00 0.00 2.69
551 552 7.022384 CGGTCGCTAATAAGATAAGTCCTTAG 58.978 42.308 0.00 0.00 30.61 2.18
552 553 7.308469 CGGTCGCTAATAAGATAAGTCCTTAGT 60.308 40.741 0.00 0.00 30.61 2.24
553 554 7.808856 GGTCGCTAATAAGATAAGTCCTTAGTG 59.191 40.741 0.00 0.00 30.61 2.74
556 557 9.182933 CGCTAATAAGATAAGTCCTTAGTGTTC 57.817 37.037 0.00 0.00 30.61 3.18
564 565 7.878644 AGATAAGTCCTTAGTGTTCTTTTGTCC 59.121 37.037 0.00 0.00 0.00 4.02
565 566 5.367945 AGTCCTTAGTGTTCTTTTGTCCA 57.632 39.130 0.00 0.00 0.00 4.02
566 567 5.368989 AGTCCTTAGTGTTCTTTTGTCCAG 58.631 41.667 0.00 0.00 0.00 3.86
567 568 4.023963 GTCCTTAGTGTTCTTTTGTCCAGC 60.024 45.833 0.00 0.00 0.00 4.85
568 569 3.253432 CCTTAGTGTTCTTTTGTCCAGCC 59.747 47.826 0.00 0.00 0.00 4.85
569 570 1.308998 AGTGTTCTTTTGTCCAGCCG 58.691 50.000 0.00 0.00 0.00 5.52
570 571 0.310854 GTGTTCTTTTGTCCAGCCGG 59.689 55.000 0.00 0.00 0.00 6.13
574 575 0.106918 TCTTTTGTCCAGCCGGTTGT 60.107 50.000 17.69 0.00 0.00 3.32
575 576 0.030638 CTTTTGTCCAGCCGGTTGTG 59.969 55.000 17.69 8.85 0.00 3.33
576 577 1.388065 TTTTGTCCAGCCGGTTGTGG 61.388 55.000 17.69 14.63 34.87 4.17
585 586 2.411290 CGGTTGTGGCTTTGCGTT 59.589 55.556 0.00 0.00 0.00 4.84
586 587 1.943693 CGGTTGTGGCTTTGCGTTG 60.944 57.895 0.00 0.00 0.00 4.10
587 588 1.140804 GGTTGTGGCTTTGCGTTGT 59.859 52.632 0.00 0.00 0.00 3.32
588 589 0.459411 GGTTGTGGCTTTGCGTTGTT 60.459 50.000 0.00 0.00 0.00 2.83
590 591 2.531206 GTTGTGGCTTTGCGTTGTTTA 58.469 42.857 0.00 0.00 0.00 2.01
593 594 3.786635 TGTGGCTTTGCGTTGTTTATTT 58.213 36.364 0.00 0.00 0.00 1.40
594 595 4.184629 TGTGGCTTTGCGTTGTTTATTTT 58.815 34.783 0.00 0.00 0.00 1.82
595 596 4.631813 TGTGGCTTTGCGTTGTTTATTTTT 59.368 33.333 0.00 0.00 0.00 1.94
634 635 9.990360 TTTGTGAGTTGTACTTTACATATCAGA 57.010 29.630 0.00 0.26 38.68 3.27
635 636 8.981724 TGTGAGTTGTACTTTACATATCAGAC 57.018 34.615 0.00 0.00 38.68 3.51
636 637 8.803235 TGTGAGTTGTACTTTACATATCAGACT 58.197 33.333 0.00 0.00 38.68 3.24
656 657 7.487829 TCAGACTATTTGTTTTGTTGAACTTGC 59.512 33.333 0.00 0.00 0.00 4.01
657 658 7.489113 CAGACTATTTGTTTTGTTGAACTTGCT 59.511 33.333 0.00 0.00 0.00 3.91
658 659 8.034804 AGACTATTTGTTTTGTTGAACTTGCTT 58.965 29.630 0.00 0.00 0.00 3.91
659 660 8.546597 ACTATTTGTTTTGTTGAACTTGCTTT 57.453 26.923 0.00 0.00 0.00 3.51
660 661 9.646427 ACTATTTGTTTTGTTGAACTTGCTTTA 57.354 25.926 0.00 0.00 0.00 1.85
671 672 8.846211 TGTTGAACTTGCTTTAATAAAGTAGCT 58.154 29.630 13.56 0.00 40.64 3.32
672 673 9.118236 GTTGAACTTGCTTTAATAAAGTAGCTG 57.882 33.333 13.56 6.77 40.64 4.24
673 674 7.305474 TGAACTTGCTTTAATAAAGTAGCTGC 58.695 34.615 13.56 0.00 40.64 5.25
674 675 6.817765 ACTTGCTTTAATAAAGTAGCTGCA 57.182 33.333 13.56 3.29 40.64 4.41
675 676 7.396540 ACTTGCTTTAATAAAGTAGCTGCAT 57.603 32.000 13.56 0.00 40.64 3.96
676 677 7.253422 ACTTGCTTTAATAAAGTAGCTGCATG 58.747 34.615 13.56 9.60 40.64 4.06
678 679 5.125257 TGCTTTAATAAAGTAGCTGCATGCA 59.875 36.000 21.29 21.29 41.49 3.96
679 680 6.183360 TGCTTTAATAAAGTAGCTGCATGCAT 60.183 34.615 22.97 10.26 41.49 3.96
681 682 7.572523 TTTAATAAAGTAGCTGCATGCATCT 57.427 32.000 25.79 25.79 45.94 2.90
683 684 6.461110 AATAAAGTAGCTGCATGCATCTTT 57.539 33.333 27.41 27.01 45.94 2.52
684 685 4.796038 AAAGTAGCTGCATGCATCTTTT 57.204 36.364 27.41 19.42 45.94 2.27
685 686 4.367386 AAGTAGCTGCATGCATCTTTTC 57.633 40.909 27.41 17.70 45.94 2.29
687 688 1.456296 AGCTGCATGCATCTTTTCGA 58.544 45.000 22.97 0.00 45.94 3.71
688 689 2.022195 AGCTGCATGCATCTTTTCGAT 58.978 42.857 22.97 2.88 45.94 3.59
689 690 3.208594 AGCTGCATGCATCTTTTCGATA 58.791 40.909 22.97 0.00 45.94 2.92
691 692 3.242837 GCTGCATGCATCTTTTCGATACA 60.243 43.478 22.97 0.00 42.31 2.29
692 693 4.731483 GCTGCATGCATCTTTTCGATACAA 60.731 41.667 22.97 0.00 42.31 2.41
694 695 5.707931 TGCATGCATCTTTTCGATACAAAA 58.292 33.333 18.46 0.00 29.52 2.44
695 696 5.801444 TGCATGCATCTTTTCGATACAAAAG 59.199 36.000 18.46 1.62 42.49 2.27
696 697 5.276067 GCATGCATCTTTTCGATACAAAAGC 60.276 40.000 14.21 0.00 41.38 3.51
697 698 4.732784 TGCATCTTTTCGATACAAAAGCC 58.267 39.130 2.99 0.00 41.38 4.35
698 699 3.786048 GCATCTTTTCGATACAAAAGCCG 59.214 43.478 2.99 0.00 41.38 5.52
701 702 1.455248 TTTCGATACAAAAGCCGGGG 58.545 50.000 2.18 0.00 0.00 5.73
702 703 0.614294 TTCGATACAAAAGCCGGGGA 59.386 50.000 2.18 0.00 0.00 4.81
704 705 0.944386 CGATACAAAAGCCGGGGATG 59.056 55.000 2.18 0.00 0.00 3.51
706 707 1.947456 GATACAAAAGCCGGGGATGAC 59.053 52.381 2.18 0.00 0.00 3.06
707 708 0.034863 TACAAAAGCCGGGGATGACC 60.035 55.000 2.18 0.00 39.11 4.02
708 709 1.000896 CAAAAGCCGGGGATGACCT 60.001 57.895 2.18 0.00 40.03 3.85
709 710 1.032114 CAAAAGCCGGGGATGACCTC 61.032 60.000 2.18 0.00 40.03 3.85
710 711 2.211468 AAAAGCCGGGGATGACCTCC 62.211 60.000 2.18 0.00 44.11 4.30
711 712 3.642741 AAGCCGGGGATGACCTCCT 62.643 63.158 2.18 0.00 44.28 3.69
712 713 3.090532 GCCGGGGATGACCTCCTT 61.091 66.667 2.18 0.00 44.28 3.36
713 714 2.680370 GCCGGGGATGACCTCCTTT 61.680 63.158 2.18 0.00 44.28 3.11
715 716 0.107165 CCGGGGATGACCTCCTTTTC 60.107 60.000 0.00 0.00 44.28 2.29
716 717 0.618458 CGGGGATGACCTCCTTTTCA 59.382 55.000 0.00 0.00 44.28 2.69
717 718 1.407437 CGGGGATGACCTCCTTTTCAG 60.407 57.143 0.00 0.00 44.28 3.02
718 719 1.916181 GGGGATGACCTCCTTTTCAGA 59.084 52.381 0.00 0.00 44.28 3.27
719 720 2.308866 GGGGATGACCTCCTTTTCAGAA 59.691 50.000 0.00 0.00 44.28 3.02
721 722 4.407365 GGGATGACCTCCTTTTCAGAAAA 58.593 43.478 8.09 8.09 44.28 2.29
722 723 4.832823 GGGATGACCTCCTTTTCAGAAAAA 59.167 41.667 9.63 0.00 44.28 1.94
750 824 4.246458 CACCTCTTCCCTACGAAAGAAAG 58.754 47.826 0.00 0.00 0.00 2.62
779 854 8.511604 AGGTTTTACATCTCATTCTTATGTGG 57.488 34.615 0.00 0.00 35.54 4.17
840 916 6.153680 TCTCATCTGGAAAGTAGGTTCTTCTC 59.846 42.308 0.00 0.00 0.00 2.87
843 919 5.855045 TCTGGAAAGTAGGTTCTTCTCAAC 58.145 41.667 0.00 0.00 0.00 3.18
846 922 5.820947 TGGAAAGTAGGTTCTTCTCAACAAC 59.179 40.000 0.00 0.00 0.00 3.32
850 926 7.696992 AAGTAGGTTCTTCTCAACAACAAAA 57.303 32.000 0.00 0.00 0.00 2.44
851 927 7.696992 AGTAGGTTCTTCTCAACAACAAAAA 57.303 32.000 0.00 0.00 0.00 1.94
938 1020 1.202486 TCACGCCGTCAAGGAATATCC 60.202 52.381 0.00 0.00 45.00 2.59
939 1021 0.106149 ACGCCGTCAAGGAATATCCC 59.894 55.000 0.00 0.00 45.00 3.85
956 1038 4.868172 ATCCCAGATCAGATCAAAACCA 57.132 40.909 13.14 0.00 0.00 3.67
957 1039 4.656100 TCCCAGATCAGATCAAAACCAA 57.344 40.909 13.14 0.00 0.00 3.67
1216 1298 2.730672 CGCAAAAGGAGAGACGCCG 61.731 63.158 0.00 0.00 0.00 6.46
1221 1303 3.587170 AAGGAGAGACGCCGAGGGT 62.587 63.158 0.00 0.00 0.00 4.34
1254 1336 3.047877 GGTGGCGACGTGGAAAGG 61.048 66.667 0.11 0.00 0.00 3.11
1257 1339 4.011517 GGCGACGTGGAAAGGGGA 62.012 66.667 0.11 0.00 0.00 4.81
1338 1429 3.443045 GCCCAACTCCACGCCATG 61.443 66.667 0.00 0.00 0.00 3.66
1369 1460 4.383861 CACGCTCAGCTCAGGGCA 62.384 66.667 0.28 0.00 44.79 5.36
1392 1483 2.359900 GATGACCTTGAGGAATGCGTT 58.640 47.619 3.59 0.00 38.94 4.84
1545 1636 4.351938 CGCGAGTCCCCGAACACA 62.352 66.667 0.00 0.00 0.00 3.72
1561 1663 1.675483 ACACATGACGCTTTGCTTGAA 59.325 42.857 0.00 0.00 0.00 2.69
1565 1667 1.378531 TGACGCTTTGCTTGAACTGT 58.621 45.000 0.00 0.00 0.00 3.55
1577 1679 5.587289 TGCTTGAACTGTTTTGTGGATAAC 58.413 37.500 0.00 0.00 0.00 1.89
1650 1752 2.953466 TCTCAAATTCTACCCGGTCG 57.047 50.000 0.00 0.00 0.00 4.79
1676 1778 1.219124 GAGACCAGCGAATCAGGCA 59.781 57.895 0.00 0.00 0.00 4.75
1679 1781 2.046023 CCAGCGAATCAGGCACCA 60.046 61.111 0.00 0.00 0.00 4.17
1681 1783 1.672030 CAGCGAATCAGGCACCACA 60.672 57.895 0.00 0.00 0.00 4.17
1749 1852 0.394762 TGTTCCTCATGCATCCTGGC 60.395 55.000 0.00 0.00 0.00 4.85
1751 1854 1.141657 GTTCCTCATGCATCCTGGCTA 59.858 52.381 0.00 0.00 34.04 3.93
1764 1867 5.291858 GCATCCTGGCTAAGTTAATTTTTGC 59.708 40.000 0.00 0.00 0.00 3.68
1777 1880 9.546428 AAGTTAATTTTTGCTGCAGTCTATTTT 57.454 25.926 16.64 5.99 0.00 1.82
1787 1890 8.109705 TGCTGCAGTCTATTTTTCAGATTTAA 57.890 30.769 16.64 0.00 0.00 1.52
1814 1917 1.141019 TGCATCTCTAACGCCGACC 59.859 57.895 0.00 0.00 0.00 4.79
1817 1920 0.460311 CATCTCTAACGCCGACCCTT 59.540 55.000 0.00 0.00 0.00 3.95
1831 1934 2.262292 CCTTAAACGACCCGCGGA 59.738 61.111 30.73 0.00 46.49 5.54
1862 1965 1.334960 GCGTGGTCCTGATGTGTTTTG 60.335 52.381 0.00 0.00 0.00 2.44
1863 1966 2.217750 CGTGGTCCTGATGTGTTTTGA 58.782 47.619 0.00 0.00 0.00 2.69
1866 1977 3.569701 GTGGTCCTGATGTGTTTTGACAT 59.430 43.478 0.00 0.00 39.34 3.06
1876 1987 1.962100 TGTTTTGACATGCCTGCATCA 59.038 42.857 0.70 0.00 33.90 3.07
1887 1998 2.434185 TGCATCAGTCCGTTCGGC 60.434 61.111 6.35 2.31 0.00 5.54
1903 2014 0.233848 CGGCGGTACAAACACACTTC 59.766 55.000 0.00 0.00 0.00 3.01
1905 2016 1.529865 GGCGGTACAAACACACTTCTC 59.470 52.381 0.00 0.00 0.00 2.87
1906 2017 1.529865 GCGGTACAAACACACTTCTCC 59.470 52.381 0.00 0.00 0.00 3.71
1907 2018 2.828877 CGGTACAAACACACTTCTCCA 58.171 47.619 0.00 0.00 0.00 3.86
1908 2019 3.199677 CGGTACAAACACACTTCTCCAA 58.800 45.455 0.00 0.00 0.00 3.53
1914 2026 3.757745 AACACACTTCTCCAACAAACG 57.242 42.857 0.00 0.00 0.00 3.60
1918 2030 2.943033 ACACTTCTCCAACAAACGGAAG 59.057 45.455 0.00 0.00 39.19 3.46
1920 2032 3.815401 CACTTCTCCAACAAACGGAAGAT 59.185 43.478 0.00 0.00 37.43 2.40
1923 2035 6.017440 CACTTCTCCAACAAACGGAAGATAAA 60.017 38.462 0.00 0.00 37.43 1.40
1936 2048 5.417894 ACGGAAGATAAATTGGAGGGTTTTC 59.582 40.000 0.00 0.00 0.00 2.29
1957 2069 2.048597 AGCGTCCGAATCGTTGCA 60.049 55.556 12.13 0.00 0.00 4.08
1999 2111 0.762418 CCCACCAAAAACCCCTTTCC 59.238 55.000 0.00 0.00 0.00 3.13
2003 2115 0.033366 CCAAAAACCCCTTTCCTGCG 59.967 55.000 0.00 0.00 0.00 5.18
2020 2132 3.961729 GCCCACTCGCGTTTACTT 58.038 55.556 5.77 0.00 0.00 2.24
2030 2142 1.145803 GCGTTTACTTCGAAGCCAGT 58.854 50.000 24.86 8.94 0.00 4.00
2067 2179 3.121030 CCAAGGCAGAAGCGACCG 61.121 66.667 0.00 0.00 43.41 4.79
2095 2207 3.443045 CCGGCATTGAAGCGGCTT 61.443 61.111 16.36 16.36 33.96 4.35
2123 2235 1.733402 CTGATCGCCGCCTTCTCTCT 61.733 60.000 0.00 0.00 0.00 3.10
2131 2243 1.676916 CCGCCTTCTCTCTGCATTGAA 60.677 52.381 0.00 0.00 0.00 2.69
2134 2246 2.816087 GCCTTCTCTCTGCATTGAAACA 59.184 45.455 0.00 0.00 0.00 2.83
2145 2257 0.461135 ATTGAAACATCCATGCCGGC 59.539 50.000 22.73 22.73 33.14 6.13
2146 2258 0.897401 TTGAAACATCCATGCCGGCA 60.897 50.000 34.80 34.80 33.14 5.69
2166 2278 0.919710 GAGGCCACCCTGTAAATCCT 59.080 55.000 5.01 0.00 43.12 3.24
2175 2287 4.080919 CACCCTGTAAATCCTCTGTGATCA 60.081 45.833 0.00 0.00 0.00 2.92
2199 2311 2.280797 GCAACACGTCAGGCAGGA 60.281 61.111 0.00 0.00 0.00 3.86
2266 2378 3.154589 GGGCACCGAGGAAAAGTAG 57.845 57.895 0.00 0.00 40.86 2.57
2273 2385 4.122776 CACCGAGGAAAAGTAGATCATGG 58.877 47.826 0.00 0.00 0.00 3.66
2308 2420 4.717313 GGTCCCACGAAGGCCACC 62.717 72.222 5.01 0.00 35.39 4.61
2328 2440 2.280933 CACCACGTTGCCGGGTTA 60.281 61.111 2.18 0.00 36.08 2.85
2329 2441 2.281002 ACCACGTTGCCGGGTTAC 60.281 61.111 2.18 0.00 35.10 2.50
2330 2442 2.280933 CCACGTTGCCGGGTTACA 60.281 61.111 2.18 0.00 35.04 2.41
2331 2443 2.609759 CCACGTTGCCGGGTTACAC 61.610 63.158 2.18 0.00 35.04 2.90
2332 2444 1.888172 CACGTTGCCGGGTTACACA 60.888 57.895 2.18 0.00 38.78 3.72
2333 2445 1.595929 ACGTTGCCGGGTTACACAG 60.596 57.895 2.18 0.00 38.78 3.66
2334 2446 2.951458 GTTGCCGGGTTACACAGC 59.049 61.111 2.18 0.00 0.00 4.40
2335 2447 2.281900 TTGCCGGGTTACACAGCC 60.282 61.111 2.18 0.00 40.04 4.85
2340 2452 2.045340 GGGTTACACAGCCGGCAT 60.045 61.111 31.54 14.24 31.79 4.40
2341 2453 1.677633 GGGTTACACAGCCGGCATT 60.678 57.895 31.54 12.35 31.79 3.56
2342 2454 1.248101 GGGTTACACAGCCGGCATTT 61.248 55.000 31.54 12.12 31.79 2.32
2343 2455 0.601057 GGTTACACAGCCGGCATTTT 59.399 50.000 31.54 12.72 0.00 1.82
2344 2456 1.813786 GGTTACACAGCCGGCATTTTA 59.186 47.619 31.54 11.59 0.00 1.52
2345 2457 2.414957 GGTTACACAGCCGGCATTTTAC 60.415 50.000 31.54 18.03 0.00 2.01
2346 2458 1.455248 TACACAGCCGGCATTTTACC 58.545 50.000 31.54 0.00 0.00 2.85
2347 2459 0.251165 ACACAGCCGGCATTTTACCT 60.251 50.000 31.54 0.76 0.00 3.08
2348 2460 0.171007 CACAGCCGGCATTTTACCTG 59.829 55.000 31.54 17.94 0.00 4.00
2349 2461 0.965363 ACAGCCGGCATTTTACCTGG 60.965 55.000 31.54 6.67 0.00 4.45
2350 2462 0.965363 CAGCCGGCATTTTACCTGGT 60.965 55.000 31.54 4.05 0.00 4.00
2351 2463 0.965363 AGCCGGCATTTTACCTGGTG 60.965 55.000 31.54 0.00 0.00 4.17
2352 2464 0.963355 GCCGGCATTTTACCTGGTGA 60.963 55.000 24.80 0.00 0.00 4.02
2353 2465 1.094785 CCGGCATTTTACCTGGTGAG 58.905 55.000 10.23 0.00 0.00 3.51
2354 2466 0.451783 CGGCATTTTACCTGGTGAGC 59.548 55.000 10.23 5.97 0.00 4.26
2355 2467 0.451783 GGCATTTTACCTGGTGAGCG 59.548 55.000 10.23 0.00 0.00 5.03
2356 2468 0.451783 GCATTTTACCTGGTGAGCGG 59.548 55.000 10.23 0.00 0.00 5.52
2357 2469 1.094785 CATTTTACCTGGTGAGCGGG 58.905 55.000 10.23 8.18 0.00 6.13
2358 2470 0.034477 ATTTTACCTGGTGAGCGGGG 60.034 55.000 14.82 3.16 0.00 5.73
2359 2471 2.132089 TTTTACCTGGTGAGCGGGGG 62.132 60.000 14.82 0.51 0.00 5.40
2366 2478 4.509737 GTGAGCGGGGGCGTAGAC 62.510 72.222 0.00 0.00 0.00 2.59
2376 2488 2.241171 GGCGTAGACCACAACAACC 58.759 57.895 0.00 0.00 0.00 3.77
2377 2489 1.562575 GGCGTAGACCACAACAACCG 61.563 60.000 0.00 0.00 0.00 4.44
2378 2490 0.877213 GCGTAGACCACAACAACCGT 60.877 55.000 0.00 0.00 0.00 4.83
2379 2491 1.134226 CGTAGACCACAACAACCGTC 58.866 55.000 0.00 0.00 0.00 4.79
2380 2492 1.269413 CGTAGACCACAACAACCGTCT 60.269 52.381 0.00 0.00 38.97 4.18
2381 2493 2.800629 CGTAGACCACAACAACCGTCTT 60.801 50.000 0.00 0.00 36.91 3.01
2382 2494 1.949465 AGACCACAACAACCGTCTTC 58.051 50.000 0.00 0.00 31.58 2.87
2383 2495 0.942252 GACCACAACAACCGTCTTCC 59.058 55.000 0.00 0.00 0.00 3.46
2384 2496 0.464916 ACCACAACAACCGTCTTCCC 60.465 55.000 0.00 0.00 0.00 3.97
2385 2497 1.170290 CCACAACAACCGTCTTCCCC 61.170 60.000 0.00 0.00 0.00 4.81
2386 2498 0.179029 CACAACAACCGTCTTCCCCT 60.179 55.000 0.00 0.00 0.00 4.79
2387 2499 0.179029 ACAACAACCGTCTTCCCCTG 60.179 55.000 0.00 0.00 0.00 4.45
2388 2500 1.228154 AACAACCGTCTTCCCCTGC 60.228 57.895 0.00 0.00 0.00 4.85
2389 2501 2.359975 CAACCGTCTTCCCCTGCC 60.360 66.667 0.00 0.00 0.00 4.85
2390 2502 3.647771 AACCGTCTTCCCCTGCCC 61.648 66.667 0.00 0.00 0.00 5.36
2391 2503 4.974438 ACCGTCTTCCCCTGCCCA 62.974 66.667 0.00 0.00 0.00 5.36
2392 2504 3.646715 CCGTCTTCCCCTGCCCAA 61.647 66.667 0.00 0.00 0.00 4.12
2393 2505 2.434331 CGTCTTCCCCTGCCCAAA 59.566 61.111 0.00 0.00 0.00 3.28
2394 2506 1.228429 CGTCTTCCCCTGCCCAAAA 60.228 57.895 0.00 0.00 0.00 2.44
2395 2507 0.825840 CGTCTTCCCCTGCCCAAAAA 60.826 55.000 0.00 0.00 0.00 1.94
2396 2508 0.679505 GTCTTCCCCTGCCCAAAAAC 59.320 55.000 0.00 0.00 0.00 2.43
2397 2509 0.471022 TCTTCCCCTGCCCAAAAACC 60.471 55.000 0.00 0.00 0.00 3.27
2398 2510 0.762461 CTTCCCCTGCCCAAAAACCA 60.762 55.000 0.00 0.00 0.00 3.67
2399 2511 0.326618 TTCCCCTGCCCAAAAACCAA 60.327 50.000 0.00 0.00 0.00 3.67
2400 2512 1.051556 TCCCCTGCCCAAAAACCAAC 61.052 55.000 0.00 0.00 0.00 3.77
2401 2513 1.449782 CCCTGCCCAAAAACCAACC 59.550 57.895 0.00 0.00 0.00 3.77
2402 2514 1.053835 CCCTGCCCAAAAACCAACCT 61.054 55.000 0.00 0.00 0.00 3.50
2403 2515 0.836606 CCTGCCCAAAAACCAACCTT 59.163 50.000 0.00 0.00 0.00 3.50
2404 2516 1.474855 CCTGCCCAAAAACCAACCTTG 60.475 52.381 0.00 0.00 0.00 3.61
2405 2517 1.484240 CTGCCCAAAAACCAACCTTGA 59.516 47.619 0.00 0.00 0.00 3.02
2406 2518 2.104622 CTGCCCAAAAACCAACCTTGAT 59.895 45.455 0.00 0.00 0.00 2.57
2407 2519 2.507471 TGCCCAAAAACCAACCTTGATT 59.493 40.909 0.00 0.00 0.00 2.57
2408 2520 3.138304 GCCCAAAAACCAACCTTGATTC 58.862 45.455 0.00 0.00 0.00 2.52
2409 2521 3.389221 CCCAAAAACCAACCTTGATTCG 58.611 45.455 0.00 0.00 0.00 3.34
2410 2522 3.181470 CCCAAAAACCAACCTTGATTCGT 60.181 43.478 0.00 0.00 0.00 3.85
2411 2523 3.801594 CCAAAAACCAACCTTGATTCGTG 59.198 43.478 0.00 0.00 0.00 4.35
2412 2524 2.793278 AAACCAACCTTGATTCGTGC 57.207 45.000 0.00 0.00 0.00 5.34
2413 2525 1.981256 AACCAACCTTGATTCGTGCT 58.019 45.000 0.00 0.00 0.00 4.40
2414 2526 1.981256 ACCAACCTTGATTCGTGCTT 58.019 45.000 0.00 0.00 0.00 3.91
2415 2527 1.880027 ACCAACCTTGATTCGTGCTTC 59.120 47.619 0.00 0.00 0.00 3.86
2416 2528 1.879380 CCAACCTTGATTCGTGCTTCA 59.121 47.619 0.00 0.00 0.00 3.02
2417 2529 2.350772 CCAACCTTGATTCGTGCTTCAC 60.351 50.000 0.00 0.00 0.00 3.18
2429 2541 2.125512 CTTCACGGAAGCGGAGGG 60.126 66.667 1.49 0.00 32.78 4.30
2430 2542 2.602267 TTCACGGAAGCGGAGGGA 60.602 61.111 0.00 0.00 0.00 4.20
2431 2543 2.564553 CTTCACGGAAGCGGAGGGAG 62.565 65.000 1.49 0.00 32.78 4.30
2432 2544 4.148825 CACGGAAGCGGAGGGAGG 62.149 72.222 0.00 0.00 0.00 4.30
2435 2547 2.042230 GGAAGCGGAGGGAGGGTA 60.042 66.667 0.00 0.00 0.00 3.69
2436 2548 2.433146 GGAAGCGGAGGGAGGGTAC 61.433 68.421 0.00 0.00 0.00 3.34
2437 2549 1.381463 GAAGCGGAGGGAGGGTACT 60.381 63.158 0.00 0.00 0.00 2.73
2438 2550 1.381463 AAGCGGAGGGAGGGTACTC 60.381 63.158 0.00 0.00 43.20 2.59
2439 2551 1.876546 AAGCGGAGGGAGGGTACTCT 61.877 60.000 0.00 0.00 43.46 3.24
2440 2552 1.829096 GCGGAGGGAGGGTACTCTC 60.829 68.421 14.86 14.86 44.98 3.20
2450 2562 2.108568 GGTACTCTCACCCTCTCGC 58.891 63.158 0.00 0.00 31.91 5.03
2451 2563 0.394625 GGTACTCTCACCCTCTCGCT 60.395 60.000 0.00 0.00 31.91 4.93
2452 2564 0.736053 GTACTCTCACCCTCTCGCTG 59.264 60.000 0.00 0.00 0.00 5.18
2453 2565 0.618981 TACTCTCACCCTCTCGCTGA 59.381 55.000 0.00 0.00 0.00 4.26
2454 2566 0.251386 ACTCTCACCCTCTCGCTGAA 60.251 55.000 0.00 0.00 0.00 3.02
2455 2567 0.455410 CTCTCACCCTCTCGCTGAAG 59.545 60.000 0.00 0.00 0.00 3.02
2456 2568 1.153667 CTCACCCTCTCGCTGAAGC 60.154 63.158 0.00 0.00 37.78 3.86
2457 2569 1.881903 CTCACCCTCTCGCTGAAGCA 61.882 60.000 2.79 0.00 42.21 3.91
2458 2570 1.220206 CACCCTCTCGCTGAAGCAT 59.780 57.895 2.79 0.00 42.21 3.79
2459 2571 0.461548 CACCCTCTCGCTGAAGCATA 59.538 55.000 2.79 0.00 42.21 3.14
2460 2572 0.461961 ACCCTCTCGCTGAAGCATAC 59.538 55.000 2.79 0.00 42.21 2.39
2461 2573 0.249657 CCCTCTCGCTGAAGCATACC 60.250 60.000 2.79 0.00 42.21 2.73
2462 2574 0.249657 CCTCTCGCTGAAGCATACCC 60.250 60.000 2.79 0.00 42.21 3.69
2463 2575 0.249657 CTCTCGCTGAAGCATACCCC 60.250 60.000 2.79 0.00 42.21 4.95
2464 2576 0.687757 TCTCGCTGAAGCATACCCCT 60.688 55.000 2.79 0.00 42.21 4.79
2465 2577 0.249657 CTCGCTGAAGCATACCCCTC 60.250 60.000 2.79 0.00 42.21 4.30
2466 2578 0.687757 TCGCTGAAGCATACCCCTCT 60.688 55.000 2.79 0.00 42.21 3.69
2467 2579 1.040646 CGCTGAAGCATACCCCTCTA 58.959 55.000 2.79 0.00 42.21 2.43
2468 2580 1.000283 CGCTGAAGCATACCCCTCTAG 60.000 57.143 2.79 0.00 42.21 2.43
2469 2581 1.346068 GCTGAAGCATACCCCTCTAGG 59.654 57.143 0.00 0.00 41.59 3.02
2479 2591 4.277552 CCTCTAGGGCATCCGACA 57.722 61.111 0.00 0.00 38.33 4.35
2480 2592 2.045280 CCTCTAGGGCATCCGACAG 58.955 63.158 0.00 0.00 38.33 3.51
2481 2593 0.757188 CCTCTAGGGCATCCGACAGT 60.757 60.000 0.00 0.00 38.33 3.55
2482 2594 0.671251 CTCTAGGGCATCCGACAGTC 59.329 60.000 0.00 0.00 38.33 3.51
2483 2595 0.755698 TCTAGGGCATCCGACAGTCC 60.756 60.000 0.00 0.00 38.33 3.85
2484 2596 2.076622 CTAGGGCATCCGACAGTCCG 62.077 65.000 0.00 0.00 38.33 4.79
2485 2597 2.561467 TAGGGCATCCGACAGTCCGA 62.561 60.000 0.00 0.00 38.33 4.55
2486 2598 2.105128 GGCATCCGACAGTCCGAG 59.895 66.667 0.00 0.00 0.00 4.63
2487 2599 2.415608 GGCATCCGACAGTCCGAGA 61.416 63.158 0.00 0.00 0.00 4.04
2488 2600 1.064946 GCATCCGACAGTCCGAGAG 59.935 63.158 0.00 0.00 0.00 3.20
2500 2612 3.686760 CGAGAGGACTGCCAGACA 58.313 61.111 0.00 0.00 36.29 3.41
2501 2613 2.197250 CGAGAGGACTGCCAGACAT 58.803 57.895 0.00 0.00 36.29 3.06
2502 2614 0.179116 CGAGAGGACTGCCAGACATG 60.179 60.000 0.00 0.00 36.29 3.21
2503 2615 1.189752 GAGAGGACTGCCAGACATGA 58.810 55.000 0.00 0.00 36.29 3.07
2504 2616 1.136695 GAGAGGACTGCCAGACATGAG 59.863 57.143 0.00 0.00 36.29 2.90
2505 2617 0.177604 GAGGACTGCCAGACATGAGG 59.822 60.000 0.00 0.00 36.29 3.86
2506 2618 0.252421 AGGACTGCCAGACATGAGGA 60.252 55.000 0.00 0.00 36.29 3.71
2507 2619 0.615331 GGACTGCCAGACATGAGGAA 59.385 55.000 0.00 0.00 0.00 3.36
2508 2620 1.406614 GGACTGCCAGACATGAGGAAG 60.407 57.143 0.00 4.85 36.56 3.46
2509 2621 1.552337 GACTGCCAGACATGAGGAAGA 59.448 52.381 15.47 0.00 33.92 2.87
2510 2622 1.277557 ACTGCCAGACATGAGGAAGAC 59.722 52.381 15.47 0.00 33.92 3.01
2511 2623 1.277273 CTGCCAGACATGAGGAAGACA 59.723 52.381 0.00 0.00 31.67 3.41
2512 2624 1.911357 TGCCAGACATGAGGAAGACAT 59.089 47.619 0.00 0.00 0.00 3.06
2513 2625 2.286872 GCCAGACATGAGGAAGACATG 58.713 52.381 0.00 0.00 46.96 3.21
2514 2626 2.286872 CCAGACATGAGGAAGACATGC 58.713 52.381 0.00 0.00 45.95 4.06
2515 2627 2.286872 CAGACATGAGGAAGACATGCC 58.713 52.381 0.00 0.00 45.95 4.40
2516 2628 1.134580 AGACATGAGGAAGACATGCCG 60.135 52.381 0.00 0.00 45.95 5.69
2517 2629 0.615331 ACATGAGGAAGACATGCCGT 59.385 50.000 0.00 0.00 45.95 5.68
2518 2630 1.012086 CATGAGGAAGACATGCCGTG 58.988 55.000 0.00 0.00 38.58 4.94
2519 2631 0.107508 ATGAGGAAGACATGCCGTGG 60.108 55.000 0.00 0.00 0.00 4.94
2520 2632 1.450312 GAGGAAGACATGCCGTGGG 60.450 63.158 0.00 0.00 0.00 4.61
2521 2633 1.899437 GAGGAAGACATGCCGTGGGA 61.899 60.000 0.00 0.00 0.00 4.37
2522 2634 1.450312 GGAAGACATGCCGTGGGAG 60.450 63.158 0.00 0.00 0.00 4.30
2523 2635 1.296715 GAAGACATGCCGTGGGAGT 59.703 57.895 0.00 0.00 0.00 3.85
2524 2636 1.003355 AAGACATGCCGTGGGAGTG 60.003 57.895 0.00 0.00 0.00 3.51
2525 2637 2.436646 GACATGCCGTGGGAGTGG 60.437 66.667 0.00 0.00 0.00 4.00
2531 2643 4.530857 CCGTGGGAGTGGCGATCC 62.531 72.222 0.00 0.00 35.99 3.36
2532 2644 4.873129 CGTGGGAGTGGCGATCCG 62.873 72.222 2.13 0.00 37.75 4.18
2533 2645 4.530857 GTGGGAGTGGCGATCCGG 62.531 72.222 0.00 0.00 37.75 5.14
2543 2655 3.499737 CGATCCGGCACAACTGGC 61.500 66.667 0.00 0.00 45.54 4.85
2544 2656 2.045926 GATCCGGCACAACTGGCT 60.046 61.111 0.00 0.00 45.54 4.75
2545 2657 2.360350 ATCCGGCACAACTGGCTG 60.360 61.111 0.00 0.00 45.54 4.85
2546 2658 3.196207 ATCCGGCACAACTGGCTGT 62.196 57.895 0.00 0.00 45.54 4.40
2547 2659 1.836999 ATCCGGCACAACTGGCTGTA 61.837 55.000 0.00 0.00 45.54 2.74
2548 2660 2.034879 CCGGCACAACTGGCTGTAG 61.035 63.158 0.00 0.00 40.91 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
254 255 3.262135 TCGCGAATGTTTCCTTCAAAC 57.738 42.857 6.20 0.00 44.31 2.93
255 256 3.972950 TTCGCGAATGTTTCCTTCAAA 57.027 38.095 19.38 0.00 0.00 2.69
256 257 4.225984 CAATTCGCGAATGTTTCCTTCAA 58.774 39.130 33.09 2.53 0.00 2.69
259 260 2.030363 TGCAATTCGCGAATGTTTCCTT 60.030 40.909 33.09 14.99 46.97 3.36
260 261 1.539388 TGCAATTCGCGAATGTTTCCT 59.461 42.857 33.09 15.00 46.97 3.36
262 263 4.367716 TTTTGCAATTCGCGAATGTTTC 57.632 36.364 33.09 21.24 43.72 2.78
263 264 4.318689 CCTTTTTGCAATTCGCGAATGTTT 60.319 37.500 33.09 17.24 43.72 2.83
266 267 2.985809 TCCTTTTTGCAATTCGCGAATG 59.014 40.909 33.09 25.47 43.72 2.67
269 270 2.783828 TTCCTTTTTGCAATTCGCGA 57.216 40.000 3.71 3.71 46.97 5.87
270 271 3.850657 TTTTCCTTTTTGCAATTCGCG 57.149 38.095 0.00 0.00 46.97 5.87
271 272 4.526625 CCTTTTTCCTTTTTGCAATTCGC 58.473 39.130 0.00 0.00 42.89 4.70
273 274 5.588246 TGTCCCTTTTTCCTTTTTGCAATTC 59.412 36.000 0.00 0.00 0.00 2.17
274 275 5.504853 TGTCCCTTTTTCCTTTTTGCAATT 58.495 33.333 0.00 0.00 0.00 2.32
275 276 5.104569 TCTGTCCCTTTTTCCTTTTTGCAAT 60.105 36.000 0.00 0.00 0.00 3.56
276 277 4.223923 TCTGTCCCTTTTTCCTTTTTGCAA 59.776 37.500 0.00 0.00 0.00 4.08
277 278 3.772025 TCTGTCCCTTTTTCCTTTTTGCA 59.228 39.130 0.00 0.00 0.00 4.08
278 279 4.099419 TCTCTGTCCCTTTTTCCTTTTTGC 59.901 41.667 0.00 0.00 0.00 3.68
282 283 6.867519 TTTTTCTCTGTCCCTTTTTCCTTT 57.132 33.333 0.00 0.00 0.00 3.11
338 339 8.017946 GCGTTCAGATAAATGTTTCTTCTCTTT 58.982 33.333 0.00 0.00 0.00 2.52
339 340 7.173218 TGCGTTCAGATAAATGTTTCTTCTCTT 59.827 33.333 0.00 0.00 0.00 2.85
340 341 6.650807 TGCGTTCAGATAAATGTTTCTTCTCT 59.349 34.615 0.00 0.00 0.00 3.10
342 343 6.801539 TGCGTTCAGATAAATGTTTCTTCT 57.198 33.333 0.00 0.00 0.00 2.85
343 344 7.298122 TCTTGCGTTCAGATAAATGTTTCTTC 58.702 34.615 0.00 0.00 0.00 2.87
344 345 7.202016 TCTTGCGTTCAGATAAATGTTTCTT 57.798 32.000 0.00 0.00 0.00 2.52
345 346 6.801539 TCTTGCGTTCAGATAAATGTTTCT 57.198 33.333 0.00 0.00 0.00 2.52
347 348 6.016276 ACCTTCTTGCGTTCAGATAAATGTTT 60.016 34.615 0.00 0.00 0.00 2.83
348 349 5.473504 ACCTTCTTGCGTTCAGATAAATGTT 59.526 36.000 0.00 0.00 0.00 2.71
349 350 5.003804 ACCTTCTTGCGTTCAGATAAATGT 58.996 37.500 0.00 0.00 0.00 2.71
350 351 5.106555 ACACCTTCTTGCGTTCAGATAAATG 60.107 40.000 0.00 0.00 0.00 2.32
352 353 4.213270 CACACCTTCTTGCGTTCAGATAAA 59.787 41.667 0.00 0.00 0.00 1.40
353 354 3.745975 CACACCTTCTTGCGTTCAGATAA 59.254 43.478 0.00 0.00 0.00 1.75
354 355 3.325870 CACACCTTCTTGCGTTCAGATA 58.674 45.455 0.00 0.00 0.00 1.98
355 356 2.146342 CACACCTTCTTGCGTTCAGAT 58.854 47.619 0.00 0.00 0.00 2.90
356 357 1.581934 CACACCTTCTTGCGTTCAGA 58.418 50.000 0.00 0.00 0.00 3.27
357 358 0.588252 CCACACCTTCTTGCGTTCAG 59.412 55.000 0.00 0.00 0.00 3.02
359 360 1.021968 AACCACACCTTCTTGCGTTC 58.978 50.000 0.00 0.00 0.00 3.95
361 362 1.724582 GCAACCACACCTTCTTGCGT 61.725 55.000 0.00 0.00 30.45 5.24
362 363 1.008538 GCAACCACACCTTCTTGCG 60.009 57.895 0.00 0.00 30.45 4.85
363 364 1.363807 GGCAACCACACCTTCTTGC 59.636 57.895 0.00 0.00 38.64 4.01
364 365 0.817634 TCGGCAACCACACCTTCTTG 60.818 55.000 0.00 0.00 0.00 3.02
365 366 0.535102 CTCGGCAACCACACCTTCTT 60.535 55.000 0.00 0.00 0.00 2.52
368 369 1.525995 CACTCGGCAACCACACCTT 60.526 57.895 0.00 0.00 0.00 3.50
371 372 0.533308 TAACCACTCGGCAACCACAC 60.533 55.000 0.00 0.00 34.57 3.82
372 373 0.250124 CTAACCACTCGGCAACCACA 60.250 55.000 0.00 0.00 34.57 4.17
373 374 0.250166 ACTAACCACTCGGCAACCAC 60.250 55.000 0.00 0.00 34.57 4.16
374 375 0.250124 CACTAACCACTCGGCAACCA 60.250 55.000 0.00 0.00 34.57 3.67
375 376 1.574702 GCACTAACCACTCGGCAACC 61.575 60.000 0.00 0.00 34.57 3.77
376 377 1.574702 GGCACTAACCACTCGGCAAC 61.575 60.000 0.00 0.00 34.57 4.17
377 378 1.302192 GGCACTAACCACTCGGCAA 60.302 57.895 0.00 0.00 34.57 4.52
378 379 2.345991 GGCACTAACCACTCGGCA 59.654 61.111 0.00 0.00 34.57 5.69
379 380 2.436115 GGGCACTAACCACTCGGC 60.436 66.667 0.00 0.00 34.57 5.54
380 381 2.267961 GGGGCACTAACCACTCGG 59.732 66.667 0.00 0.00 38.77 4.63
381 382 3.388841 AGGGGCACTAACCACTCG 58.611 61.111 0.00 0.00 40.38 4.18
384 385 4.716003 GTGAGGGGCACTAACCAC 57.284 61.111 0.00 0.00 44.27 4.16
392 393 1.990060 GACTAGGCTGTGAGGGGCA 60.990 63.158 0.00 0.00 0.00 5.36
393 394 2.904131 GACTAGGCTGTGAGGGGC 59.096 66.667 0.00 0.00 0.00 5.80
394 395 3.082579 GCGACTAGGCTGTGAGGGG 62.083 68.421 0.00 0.00 0.00 4.79
395 396 0.752009 TAGCGACTAGGCTGTGAGGG 60.752 60.000 0.00 0.00 44.50 4.30
396 397 1.103803 TTAGCGACTAGGCTGTGAGG 58.896 55.000 0.00 0.00 44.50 3.86
397 398 3.444703 AATTAGCGACTAGGCTGTGAG 57.555 47.619 0.00 0.00 44.50 3.51
399 400 3.797256 GTGTAATTAGCGACTAGGCTGTG 59.203 47.826 0.00 0.00 44.50 3.66
400 401 3.488721 CGTGTAATTAGCGACTAGGCTGT 60.489 47.826 0.00 0.00 44.50 4.40
401 402 3.043586 CGTGTAATTAGCGACTAGGCTG 58.956 50.000 0.00 0.00 44.50 4.85
409 410 2.159476 AGAAGCGTCGTGTAATTAGCGA 60.159 45.455 7.68 7.68 0.00 4.93
411 412 3.176708 TCAGAAGCGTCGTGTAATTAGC 58.823 45.455 0.00 0.00 0.00 3.09
412 413 5.950965 ATTCAGAAGCGTCGTGTAATTAG 57.049 39.130 0.00 0.00 0.00 1.73
413 414 7.815398 TTTATTCAGAAGCGTCGTGTAATTA 57.185 32.000 0.00 0.00 0.00 1.40
414 415 6.715344 TTTATTCAGAAGCGTCGTGTAATT 57.285 33.333 0.00 0.00 0.00 1.40
416 417 5.865013 TGATTTATTCAGAAGCGTCGTGTAA 59.135 36.000 0.00 0.00 0.00 2.41
418 419 4.242475 TGATTTATTCAGAAGCGTCGTGT 58.758 39.130 0.00 0.00 0.00 4.49
420 421 4.207224 CGATGATTTATTCAGAAGCGTCGT 59.793 41.667 8.13 0.00 43.18 4.34
421 422 4.681988 CGATGATTTATTCAGAAGCGTCG 58.318 43.478 2.94 2.94 42.81 5.12
422 423 5.890110 TCGATGATTTATTCAGAAGCGTC 57.110 39.130 0.00 0.00 37.89 5.19
424 425 6.653183 ACAATCGATGATTTATTCAGAAGCG 58.347 36.000 0.00 0.00 37.89 4.68
425 426 9.591404 CTAACAATCGATGATTTATTCAGAAGC 57.409 33.333 0.00 0.00 37.89 3.86
427 428 9.056005 CCCTAACAATCGATGATTTATTCAGAA 57.944 33.333 0.00 0.00 37.89 3.02
428 429 7.661437 CCCCTAACAATCGATGATTTATTCAGA 59.339 37.037 0.00 0.00 37.89 3.27
429 430 7.094634 CCCCCTAACAATCGATGATTTATTCAG 60.095 40.741 0.00 0.00 37.89 3.02
430 431 6.714810 CCCCCTAACAATCGATGATTTATTCA 59.285 38.462 0.00 0.00 39.12 2.57
432 433 6.610830 ACCCCCTAACAATCGATGATTTATT 58.389 36.000 0.00 0.00 28.87 1.40
434 435 5.131308 TGACCCCCTAACAATCGATGATTTA 59.869 40.000 0.00 0.00 28.87 1.40
435 436 4.080015 TGACCCCCTAACAATCGATGATTT 60.080 41.667 0.00 0.00 28.87 2.17
437 438 3.045634 TGACCCCCTAACAATCGATGAT 58.954 45.455 0.00 0.00 0.00 2.45
438 439 2.434336 CTGACCCCCTAACAATCGATGA 59.566 50.000 0.00 0.00 0.00 2.92
439 440 2.485479 CCTGACCCCCTAACAATCGATG 60.485 54.545 0.00 0.00 0.00 3.84
440 441 1.768870 CCTGACCCCCTAACAATCGAT 59.231 52.381 0.00 0.00 0.00 3.59
442 443 0.463833 GCCTGACCCCCTAACAATCG 60.464 60.000 0.00 0.00 0.00 3.34
443 444 0.106669 GGCCTGACCCCCTAACAATC 60.107 60.000 0.00 0.00 0.00 2.67
444 445 2.007576 GGCCTGACCCCCTAACAAT 58.992 57.895 0.00 0.00 0.00 2.71
445 446 3.503099 GGCCTGACCCCCTAACAA 58.497 61.111 0.00 0.00 0.00 2.83
477 478 2.765807 ATCTCCCAGTGGCGGAGG 60.766 66.667 13.62 0.00 46.01 4.30
479 480 0.105709 TATCATCTCCCAGTGGCGGA 60.106 55.000 2.61 4.11 0.00 5.54
480 481 0.979665 ATATCATCTCCCAGTGGCGG 59.020 55.000 2.61 0.00 0.00 6.13
482 483 2.611473 CGTGATATCATCTCCCAGTGGC 60.611 54.545 9.02 0.00 0.00 5.01
483 484 2.630098 ACGTGATATCATCTCCCAGTGG 59.370 50.000 9.02 0.63 0.00 4.00
485 486 2.036475 GCACGTGATATCATCTCCCAGT 59.964 50.000 22.23 0.00 0.00 4.00
486 487 2.298446 AGCACGTGATATCATCTCCCAG 59.702 50.000 22.23 0.00 0.00 4.45
487 488 2.319844 AGCACGTGATATCATCTCCCA 58.680 47.619 22.23 0.00 0.00 4.37
488 489 4.727507 ATAGCACGTGATATCATCTCCC 57.272 45.455 20.11 0.00 0.00 4.30
489 490 7.484140 TGAATATAGCACGTGATATCATCTCC 58.516 38.462 28.05 13.50 0.00 3.71
490 491 8.917415 TTGAATATAGCACGTGATATCATCTC 57.083 34.615 28.05 19.13 0.00 2.75
491 492 9.526713 GATTGAATATAGCACGTGATATCATCT 57.473 33.333 28.05 13.10 0.00 2.90
495 496 9.358872 TCAAGATTGAATATAGCACGTGATATC 57.641 33.333 28.05 16.48 33.55 1.63
496 497 9.144747 GTCAAGATTGAATATAGCACGTGATAT 57.855 33.333 27.43 27.43 39.21 1.63
497 498 8.360390 AGTCAAGATTGAATATAGCACGTGATA 58.640 33.333 22.23 19.43 39.21 2.15
498 499 7.170489 CAGTCAAGATTGAATATAGCACGTGAT 59.830 37.037 22.23 17.40 39.21 3.06
499 500 6.476706 CAGTCAAGATTGAATATAGCACGTGA 59.523 38.462 22.23 0.00 39.21 4.35
500 501 6.476706 TCAGTCAAGATTGAATATAGCACGTG 59.523 38.462 12.28 12.28 39.21 4.49
501 502 6.477033 GTCAGTCAAGATTGAATATAGCACGT 59.523 38.462 0.00 0.00 39.21 4.49
502 503 6.345329 CGTCAGTCAAGATTGAATATAGCACG 60.345 42.308 0.00 0.00 39.21 5.34
503 504 6.074088 CCGTCAGTCAAGATTGAATATAGCAC 60.074 42.308 0.00 0.00 39.21 4.40
504 505 5.985530 CCGTCAGTCAAGATTGAATATAGCA 59.014 40.000 0.00 0.00 39.21 3.49
505 506 5.986135 ACCGTCAGTCAAGATTGAATATAGC 59.014 40.000 0.00 0.00 39.21 2.97
506 507 6.360947 CGACCGTCAGTCAAGATTGAATATAG 59.639 42.308 0.00 0.00 46.69 1.31
507 508 6.206498 CGACCGTCAGTCAAGATTGAATATA 58.794 40.000 0.00 0.00 46.69 0.86
508 509 5.043903 CGACCGTCAGTCAAGATTGAATAT 58.956 41.667 0.00 0.00 46.69 1.28
509 510 4.421058 CGACCGTCAGTCAAGATTGAATA 58.579 43.478 0.00 0.00 46.69 1.75
510 511 3.254060 CGACCGTCAGTCAAGATTGAAT 58.746 45.455 0.00 0.00 46.69 2.57
512 513 1.668919 GCGACCGTCAGTCAAGATTGA 60.669 52.381 0.00 0.00 46.69 2.57
513 514 0.716108 GCGACCGTCAGTCAAGATTG 59.284 55.000 0.00 0.00 46.69 2.67
514 515 0.603569 AGCGACCGTCAGTCAAGATT 59.396 50.000 0.00 0.00 46.69 2.40
515 516 1.460504 TAGCGACCGTCAGTCAAGAT 58.539 50.000 0.00 0.00 46.69 2.40
516 517 1.241165 TTAGCGACCGTCAGTCAAGA 58.759 50.000 0.00 0.00 46.69 3.02
517 518 2.279582 ATTAGCGACCGTCAGTCAAG 57.720 50.000 0.00 0.00 46.69 3.02
518 519 3.441222 TCTTATTAGCGACCGTCAGTCAA 59.559 43.478 0.00 0.00 46.69 3.18
520 521 3.687572 TCTTATTAGCGACCGTCAGTC 57.312 47.619 0.00 0.00 42.54 3.51
521 522 5.298777 ACTTATCTTATTAGCGACCGTCAGT 59.701 40.000 0.00 0.00 0.00 3.41
522 523 5.759963 ACTTATCTTATTAGCGACCGTCAG 58.240 41.667 0.00 0.00 0.00 3.51
524 525 5.048852 AGGACTTATCTTATTAGCGACCGTC 60.049 44.000 0.00 0.00 0.00 4.79
527 528 7.808856 CACTAAGGACTTATCTTATTAGCGACC 59.191 40.741 0.00 0.00 0.00 4.79
528 529 8.351461 ACACTAAGGACTTATCTTATTAGCGAC 58.649 37.037 0.00 0.00 0.00 5.19
529 530 8.461249 ACACTAAGGACTTATCTTATTAGCGA 57.539 34.615 0.00 0.00 0.00 4.93
530 531 9.182933 GAACACTAAGGACTTATCTTATTAGCG 57.817 37.037 0.00 0.00 0.00 4.26
537 538 9.274206 GACAAAAGAACACTAAGGACTTATCTT 57.726 33.333 0.00 0.00 0.00 2.40
538 539 7.878644 GGACAAAAGAACACTAAGGACTTATCT 59.121 37.037 0.00 0.00 0.00 1.98
539 540 7.660208 TGGACAAAAGAACACTAAGGACTTATC 59.340 37.037 0.00 0.00 0.00 1.75
540 541 7.514721 TGGACAAAAGAACACTAAGGACTTAT 58.485 34.615 0.00 0.00 0.00 1.73
542 543 5.751586 TGGACAAAAGAACACTAAGGACTT 58.248 37.500 0.00 0.00 0.00 3.01
543 544 5.367945 TGGACAAAAGAACACTAAGGACT 57.632 39.130 0.00 0.00 0.00 3.85
544 545 4.023963 GCTGGACAAAAGAACACTAAGGAC 60.024 45.833 0.00 0.00 0.00 3.85
545 546 4.134563 GCTGGACAAAAGAACACTAAGGA 58.865 43.478 0.00 0.00 0.00 3.36
546 547 3.253432 GGCTGGACAAAAGAACACTAAGG 59.747 47.826 0.00 0.00 0.00 2.69
547 548 3.058914 CGGCTGGACAAAAGAACACTAAG 60.059 47.826 0.00 0.00 0.00 2.18
548 549 2.875933 CGGCTGGACAAAAGAACACTAA 59.124 45.455 0.00 0.00 0.00 2.24
549 550 2.489971 CGGCTGGACAAAAGAACACTA 58.510 47.619 0.00 0.00 0.00 2.74
550 551 1.308998 CGGCTGGACAAAAGAACACT 58.691 50.000 0.00 0.00 0.00 3.55
551 552 0.310854 CCGGCTGGACAAAAGAACAC 59.689 55.000 5.28 0.00 37.49 3.32
552 553 0.106918 ACCGGCTGGACAAAAGAACA 60.107 50.000 21.41 0.00 39.21 3.18
553 554 1.029681 AACCGGCTGGACAAAAGAAC 58.970 50.000 21.41 0.00 39.21 3.01
556 557 0.030638 CACAACCGGCTGGACAAAAG 59.969 55.000 21.41 3.41 39.21 2.27
557 558 1.388065 CCACAACCGGCTGGACAAAA 61.388 55.000 21.41 0.00 39.21 2.44
558 559 1.826054 CCACAACCGGCTGGACAAA 60.826 57.895 21.41 0.00 39.21 2.83
559 560 2.203280 CCACAACCGGCTGGACAA 60.203 61.111 21.41 0.00 39.21 3.18
567 568 3.132481 AACGCAAAGCCACAACCGG 62.132 57.895 0.00 0.00 0.00 5.28
568 569 1.943693 CAACGCAAAGCCACAACCG 60.944 57.895 0.00 0.00 0.00 4.44
569 570 0.459411 AACAACGCAAAGCCACAACC 60.459 50.000 0.00 0.00 0.00 3.77
570 571 1.355005 AAACAACGCAAAGCCACAAC 58.645 45.000 0.00 0.00 0.00 3.32
608 609 9.990360 TCTGATATGTAAAGTACAACTCACAAA 57.010 29.630 0.00 0.00 42.76 2.83
609 610 9.419297 GTCTGATATGTAAAGTACAACTCACAA 57.581 33.333 0.00 0.00 42.76 3.33
610 611 8.803235 AGTCTGATATGTAAAGTACAACTCACA 58.197 33.333 0.00 0.00 42.76 3.58
629 630 9.520204 CAAGTTCAACAAAACAAATAGTCTGAT 57.480 29.630 0.00 0.00 0.00 2.90
630 631 7.487829 GCAAGTTCAACAAAACAAATAGTCTGA 59.512 33.333 0.00 0.00 0.00 3.27
631 632 7.489113 AGCAAGTTCAACAAAACAAATAGTCTG 59.511 33.333 0.00 0.00 0.00 3.51
632 633 7.547227 AGCAAGTTCAACAAAACAAATAGTCT 58.453 30.769 0.00 0.00 0.00 3.24
633 634 7.755582 AGCAAGTTCAACAAAACAAATAGTC 57.244 32.000 0.00 0.00 0.00 2.59
634 635 8.546597 AAAGCAAGTTCAACAAAACAAATAGT 57.453 26.923 0.00 0.00 0.00 2.12
645 646 8.846211 AGCTACTTTATTAAAGCAAGTTCAACA 58.154 29.630 14.67 0.00 42.27 3.33
646 647 9.118236 CAGCTACTTTATTAAAGCAAGTTCAAC 57.882 33.333 14.67 2.46 42.27 3.18
647 648 7.807907 GCAGCTACTTTATTAAAGCAAGTTCAA 59.192 33.333 14.67 0.00 42.27 2.69
648 649 7.040755 TGCAGCTACTTTATTAAAGCAAGTTCA 60.041 33.333 14.67 9.46 42.27 3.18
651 652 6.817765 TGCAGCTACTTTATTAAAGCAAGT 57.182 33.333 14.67 0.76 42.27 3.16
653 654 6.035843 GCATGCAGCTACTTTATTAAAGCAA 58.964 36.000 14.21 4.38 40.25 3.91
654 655 5.125257 TGCATGCAGCTACTTTATTAAAGCA 59.875 36.000 18.46 8.16 45.94 3.91
656 657 7.646314 AGATGCATGCAGCTACTTTATTAAAG 58.354 34.615 35.50 13.44 41.23 1.85
657 658 7.572523 AGATGCATGCAGCTACTTTATTAAA 57.427 32.000 35.50 0.57 41.23 1.52
658 659 7.572523 AAGATGCATGCAGCTACTTTATTAA 57.427 32.000 36.30 2.66 42.29 1.40
659 660 7.572523 AAAGATGCATGCAGCTACTTTATTA 57.427 32.000 36.30 3.15 42.29 0.98
660 661 6.461110 AAAGATGCATGCAGCTACTTTATT 57.539 33.333 36.30 23.21 42.29 1.40
661 662 6.461110 AAAAGATGCATGCAGCTACTTTAT 57.539 33.333 36.30 18.68 42.29 1.40
662 663 5.447683 CGAAAAGATGCATGCAGCTACTTTA 60.448 40.000 36.30 4.80 42.29 1.85
666 667 2.352651 TCGAAAAGATGCATGCAGCTAC 59.647 45.455 36.30 26.77 42.29 3.58
668 669 1.456296 TCGAAAAGATGCATGCAGCT 58.544 45.000 31.79 31.79 45.31 4.24
676 677 3.786048 CGGCTTTTGTATCGAAAAGATGC 59.214 43.478 10.73 3.82 43.02 3.91
678 679 3.377172 CCCGGCTTTTGTATCGAAAAGAT 59.623 43.478 10.73 0.00 43.02 2.40
679 680 2.745281 CCCGGCTTTTGTATCGAAAAGA 59.255 45.455 10.73 0.00 43.02 2.52
681 682 1.813786 CCCCGGCTTTTGTATCGAAAA 59.186 47.619 0.00 0.00 0.00 2.29
683 684 0.614294 TCCCCGGCTTTTGTATCGAA 59.386 50.000 0.00 0.00 0.00 3.71
684 685 0.834612 ATCCCCGGCTTTTGTATCGA 59.165 50.000 0.00 0.00 0.00 3.59
685 686 0.944386 CATCCCCGGCTTTTGTATCG 59.056 55.000 0.00 0.00 0.00 2.92
687 688 1.409661 GGTCATCCCCGGCTTTTGTAT 60.410 52.381 0.00 0.00 0.00 2.29
688 689 0.034863 GGTCATCCCCGGCTTTTGTA 60.035 55.000 0.00 0.00 0.00 2.41
689 690 1.304134 GGTCATCCCCGGCTTTTGT 60.304 57.895 0.00 0.00 0.00 2.83
691 692 1.303282 GAGGTCATCCCCGGCTTTT 59.697 57.895 0.00 0.00 0.00 2.27
692 693 2.680370 GGAGGTCATCCCCGGCTTT 61.680 63.158 0.00 0.00 43.01 3.51
724 725 4.102054 TCTTTCGTAGGGAAGAGGTGTTTT 59.898 41.667 1.88 0.00 35.70 2.43
725 726 3.644738 TCTTTCGTAGGGAAGAGGTGTTT 59.355 43.478 1.88 0.00 35.70 2.83
726 727 3.236896 TCTTTCGTAGGGAAGAGGTGTT 58.763 45.455 1.88 0.00 35.70 3.32
727 728 2.885616 TCTTTCGTAGGGAAGAGGTGT 58.114 47.619 1.88 0.00 35.70 4.16
728 729 3.955650 TTCTTTCGTAGGGAAGAGGTG 57.044 47.619 6.28 0.00 35.70 4.00
729 730 4.158015 TCTTTCTTTCGTAGGGAAGAGGT 58.842 43.478 6.28 0.00 35.70 3.85
730 731 4.803098 TCTTTCTTTCGTAGGGAAGAGG 57.197 45.455 6.28 4.71 35.70 3.69
773 848 8.635765 AGCTTCTTTTCAATACTTTCCACATA 57.364 30.769 0.00 0.00 0.00 2.29
776 851 8.100508 AGTAGCTTCTTTTCAATACTTTCCAC 57.899 34.615 0.00 0.00 0.00 4.02
779 854 8.240883 TCGAGTAGCTTCTTTTCAATACTTTC 57.759 34.615 0.00 0.00 0.00 2.62
793 868 4.678509 ATGAGATCGATCGAGTAGCTTC 57.321 45.455 23.84 14.38 0.00 3.86
796 871 4.153296 TGAGAATGAGATCGATCGAGTAGC 59.847 45.833 23.84 12.63 0.00 3.58
851 927 9.722184 GTAAGAGAAACCTACTTTCCAGTATTT 57.278 33.333 0.00 0.00 39.43 1.40
852 928 8.033626 CGTAAGAGAAACCTACTTTCCAGTATT 58.966 37.037 0.00 0.00 39.43 1.89
853 929 7.395489 TCGTAAGAGAAACCTACTTTCCAGTAT 59.605 37.037 0.00 0.00 45.01 2.12
854 930 6.716628 TCGTAAGAGAAACCTACTTTCCAGTA 59.283 38.462 0.00 0.00 45.01 2.74
904 982 4.689071 ACGGCGTGATCATTGTAATCTTA 58.311 39.130 13.76 0.00 0.00 2.10
938 1020 4.002982 TCGTTGGTTTTGATCTGATCTGG 58.997 43.478 17.82 0.00 0.00 3.86
939 1021 5.180117 ACTTCGTTGGTTTTGATCTGATCTG 59.820 40.000 17.82 0.00 0.00 2.90
956 1038 2.203294 GCACCCACCCACTTCGTT 60.203 61.111 0.00 0.00 0.00 3.85
957 1039 2.676163 GAAGCACCCACCCACTTCGT 62.676 60.000 0.00 0.00 30.23 3.85
1093 1175 0.749454 TTCCTCCGGTAGCCGTCTAC 60.749 60.000 0.00 0.00 46.80 2.59
1239 1321 4.323477 CCCCTTTCCACGTCGCCA 62.323 66.667 0.00 0.00 0.00 5.69
1320 1411 3.965258 ATGGCGTGGAGTTGGGCA 61.965 61.111 0.00 0.00 40.66 5.36
1369 1460 1.407437 GCATTCCTCAAGGTCATCGGT 60.407 52.381 0.00 0.00 36.34 4.69
1374 1465 1.202758 ACAACGCATTCCTCAAGGTCA 60.203 47.619 0.00 0.00 36.34 4.02
1380 1471 0.955428 GGCAGACAACGCATTCCTCA 60.955 55.000 0.00 0.00 0.00 3.86
1392 1483 3.303135 ACTTCGCCGAGGCAGACA 61.303 61.111 15.03 3.71 42.06 3.41
1545 1636 1.949525 ACAGTTCAAGCAAAGCGTCAT 59.050 42.857 0.00 0.00 0.00 3.06
1565 1667 5.654650 AGTGTTCCAACTGTTATCCACAAAA 59.345 36.000 11.66 0.00 33.87 2.44
1650 1752 2.201436 TTCGCTGGTCTCTCGACAGC 62.201 60.000 13.39 13.39 42.05 4.40
1676 1778 1.973515 TCTCTCAGAACTGCATGTGGT 59.026 47.619 0.00 0.00 0.00 4.16
1679 1781 4.822685 ATCTTCTCTCAGAACTGCATGT 57.177 40.909 0.00 0.00 29.89 3.21
1681 1783 6.236409 TCAAAATCTTCTCTCAGAACTGCAT 58.764 36.000 0.00 0.00 29.89 3.96
1749 1852 9.846248 AATAGACTGCAGCAAAAATTAACTTAG 57.154 29.630 15.27 0.00 0.00 2.18
1751 1854 9.546428 AAAATAGACTGCAGCAAAAATTAACTT 57.454 25.926 15.27 0.00 0.00 2.66
1787 1890 5.290386 GGCGTTAGAGATGCACTAAGTAAT 58.710 41.667 0.00 0.00 42.27 1.89
1796 1899 1.141019 GGTCGGCGTTAGAGATGCA 59.859 57.895 6.85 0.00 42.27 3.96
1797 1900 1.591863 GGGTCGGCGTTAGAGATGC 60.592 63.158 6.85 0.00 39.65 3.91
1798 1901 0.460311 AAGGGTCGGCGTTAGAGATG 59.540 55.000 6.85 0.00 0.00 2.90
1804 1907 0.600557 TCGTTTAAGGGTCGGCGTTA 59.399 50.000 6.85 0.00 0.00 3.18
1808 1911 1.742880 GGGTCGTTTAAGGGTCGGC 60.743 63.158 0.00 0.00 0.00 5.54
1814 1917 2.096442 GTCCGCGGGTCGTTTAAGG 61.096 63.158 27.83 0.00 36.19 2.69
1817 1920 3.669344 ACGTCCGCGGGTCGTTTA 61.669 61.111 31.47 9.66 43.94 2.01
1840 1943 2.815211 CACATCAGGACCACGCGG 60.815 66.667 12.47 0.00 38.77 6.46
1841 1944 1.227999 AAACACATCAGGACCACGCG 61.228 55.000 3.53 3.53 0.00 6.01
1844 1947 2.948979 TGTCAAAACACATCAGGACCAC 59.051 45.455 0.00 0.00 0.00 4.16
1845 1948 3.289407 TGTCAAAACACATCAGGACCA 57.711 42.857 0.00 0.00 0.00 4.02
1851 1954 2.288334 GCAGGCATGTCAAAACACATCA 60.288 45.455 0.00 0.00 38.48 3.07
1862 1965 1.434622 CGGACTGATGCAGGCATGTC 61.435 60.000 12.12 12.91 42.18 3.06
1863 1966 1.450848 CGGACTGATGCAGGCATGT 60.451 57.895 12.12 4.17 42.18 3.21
1866 1977 1.375908 GAACGGACTGATGCAGGCA 60.376 57.895 2.33 0.00 42.18 4.75
1887 1998 2.828877 TGGAGAAGTGTGTTTGTACCG 58.171 47.619 0.00 0.00 0.00 4.02
1891 2002 4.614993 CGTTTGTTGGAGAAGTGTGTTTGT 60.615 41.667 0.00 0.00 0.00 2.83
1894 2005 2.422127 CCGTTTGTTGGAGAAGTGTGTT 59.578 45.455 0.00 0.00 0.00 3.32
1903 2014 6.072175 TCCAATTTATCTTCCGTTTGTTGGAG 60.072 38.462 0.00 0.00 38.05 3.86
1905 2016 6.019779 TCCAATTTATCTTCCGTTTGTTGG 57.980 37.500 0.00 0.00 35.95 3.77
1906 2017 6.092748 CCTCCAATTTATCTTCCGTTTGTTG 58.907 40.000 0.00 0.00 0.00 3.33
1907 2018 5.185056 CCCTCCAATTTATCTTCCGTTTGTT 59.815 40.000 0.00 0.00 0.00 2.83
1908 2019 4.705023 CCCTCCAATTTATCTTCCGTTTGT 59.295 41.667 0.00 0.00 0.00 2.83
1914 2026 5.163550 CCGAAAACCCTCCAATTTATCTTCC 60.164 44.000 0.00 0.00 0.00 3.46
1918 2030 4.274978 TCCCGAAAACCCTCCAATTTATC 58.725 43.478 0.00 0.00 0.00 1.75
1920 2032 3.692690 CTCCCGAAAACCCTCCAATTTA 58.307 45.455 0.00 0.00 0.00 1.40
1923 2035 0.323451 GCTCCCGAAAACCCTCCAAT 60.323 55.000 0.00 0.00 0.00 3.16
2016 2128 0.321298 GGGCAACTGGCTTCGAAGTA 60.321 55.000 25.24 14.26 44.01 2.24
2019 2131 2.668212 CGGGCAACTGGCTTCGAA 60.668 61.111 0.00 0.00 44.01 3.71
2078 2190 3.443045 AAGCCGCTTCAATGCCGG 61.443 61.111 0.00 0.00 0.00 6.13
2131 2243 1.452651 CTCTGCCGGCATGGATGTT 60.453 57.895 32.87 0.00 42.00 2.71
2145 2257 1.408822 GGATTTACAGGGTGGCCTCTG 60.409 57.143 16.13 16.13 37.07 3.35
2146 2258 0.919710 GGATTTACAGGGTGGCCTCT 59.080 55.000 3.32 0.00 0.00 3.69
2166 2278 2.076100 GTTGCCGACATTGATCACAGA 58.924 47.619 0.00 0.00 0.00 3.41
2175 2287 1.227999 CCTGACGTGTTGCCGACATT 61.228 55.000 0.00 0.00 41.10 2.71
2199 2311 0.324091 CTGCATGGCTTCTTTCCCCT 60.324 55.000 0.00 0.00 0.00 4.79
2250 2362 3.247006 TGATCTACTTTTCCTCGGTGC 57.753 47.619 0.00 0.00 0.00 5.01
2266 2378 4.996434 CGGCGGCCTCCCATGATC 62.996 72.222 18.34 0.00 0.00 2.92
2286 2398 2.995574 CCTTCGTGGGACCCGAGT 60.996 66.667 5.91 0.00 35.49 4.18
2290 2402 4.717313 GTGGCCTTCGTGGGACCC 62.717 72.222 2.45 2.45 36.00 4.46
2317 2429 2.622962 GGCTGTGTAACCCGGCAAC 61.623 63.158 0.00 0.00 34.36 4.17
2318 2430 2.281900 GGCTGTGTAACCCGGCAA 60.282 61.111 0.00 0.00 34.36 4.52
2319 2431 4.690719 CGGCTGTGTAACCCGGCA 62.691 66.667 0.00 0.00 37.89 5.69
2322 2434 3.969250 ATGCCGGCTGTGTAACCCG 62.969 63.158 29.70 0.00 40.67 5.28
2323 2435 1.248101 AAATGCCGGCTGTGTAACCC 61.248 55.000 29.70 0.00 34.36 4.11
2324 2436 0.601057 AAAATGCCGGCTGTGTAACC 59.399 50.000 29.70 0.00 34.36 2.85
2325 2437 2.414957 GGTAAAATGCCGGCTGTGTAAC 60.415 50.000 29.70 17.58 37.35 2.50
2326 2438 1.813786 GGTAAAATGCCGGCTGTGTAA 59.186 47.619 29.70 6.08 0.00 2.41
2327 2439 1.003812 AGGTAAAATGCCGGCTGTGTA 59.996 47.619 29.70 11.91 0.00 2.90
2328 2440 0.251165 AGGTAAAATGCCGGCTGTGT 60.251 50.000 29.70 13.03 0.00 3.72
2329 2441 0.171007 CAGGTAAAATGCCGGCTGTG 59.829 55.000 29.70 9.07 0.00 3.66
2330 2442 0.965363 CCAGGTAAAATGCCGGCTGT 60.965 55.000 29.70 14.01 0.00 4.40
2331 2443 0.965363 ACCAGGTAAAATGCCGGCTG 60.965 55.000 29.70 14.67 0.00 4.85
2332 2444 0.965363 CACCAGGTAAAATGCCGGCT 60.965 55.000 29.70 9.99 0.00 5.52
2333 2445 0.963355 TCACCAGGTAAAATGCCGGC 60.963 55.000 22.73 22.73 0.00 6.13
2334 2446 1.094785 CTCACCAGGTAAAATGCCGG 58.905 55.000 0.00 0.00 0.00 6.13
2335 2447 0.451783 GCTCACCAGGTAAAATGCCG 59.548 55.000 0.00 0.00 0.00 5.69
2336 2448 0.451783 CGCTCACCAGGTAAAATGCC 59.548 55.000 0.00 0.00 0.00 4.40
2337 2449 0.451783 CCGCTCACCAGGTAAAATGC 59.548 55.000 0.00 0.00 0.00 3.56
2338 2450 1.094785 CCCGCTCACCAGGTAAAATG 58.905 55.000 0.00 0.00 0.00 2.32
2339 2451 0.034477 CCCCGCTCACCAGGTAAAAT 60.034 55.000 0.00 0.00 0.00 1.82
2340 2452 1.377229 CCCCGCTCACCAGGTAAAA 59.623 57.895 0.00 0.00 0.00 1.52
2341 2453 2.598787 CCCCCGCTCACCAGGTAAA 61.599 63.158 0.00 0.00 0.00 2.01
2342 2454 3.006728 CCCCCGCTCACCAGGTAA 61.007 66.667 0.00 0.00 0.00 2.85
2349 2461 4.509737 GTCTACGCCCCCGCTCAC 62.510 72.222 0.00 0.00 38.22 3.51
2354 2466 3.697747 TTGTGGTCTACGCCCCCG 61.698 66.667 0.00 0.00 41.14 5.73
2355 2467 2.046604 GTTGTGGTCTACGCCCCC 60.047 66.667 0.00 0.00 0.00 5.40
2356 2468 1.071814 TTGTTGTGGTCTACGCCCC 59.928 57.895 0.00 0.00 0.00 5.80
2357 2469 1.232621 GGTTGTTGTGGTCTACGCCC 61.233 60.000 0.00 0.00 0.00 6.13
2358 2470 1.562575 CGGTTGTTGTGGTCTACGCC 61.563 60.000 0.00 0.00 0.00 5.68
2359 2471 0.877213 ACGGTTGTTGTGGTCTACGC 60.877 55.000 0.00 0.00 0.00 4.42
2360 2472 1.134226 GACGGTTGTTGTGGTCTACG 58.866 55.000 0.00 0.00 0.00 3.51
2361 2473 2.521105 AGACGGTTGTTGTGGTCTAC 57.479 50.000 0.00 0.00 37.94 2.59
2362 2474 2.224113 GGAAGACGGTTGTTGTGGTCTA 60.224 50.000 0.00 0.00 38.72 2.59
2363 2475 1.474498 GGAAGACGGTTGTTGTGGTCT 60.474 52.381 0.00 0.00 41.25 3.85
2364 2476 0.942252 GGAAGACGGTTGTTGTGGTC 59.058 55.000 0.00 0.00 0.00 4.02
2365 2477 0.464916 GGGAAGACGGTTGTTGTGGT 60.465 55.000 0.00 0.00 0.00 4.16
2366 2478 1.170290 GGGGAAGACGGTTGTTGTGG 61.170 60.000 0.00 0.00 0.00 4.17
2367 2479 0.179029 AGGGGAAGACGGTTGTTGTG 60.179 55.000 0.00 0.00 0.00 3.33
2368 2480 0.179029 CAGGGGAAGACGGTTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
2369 2481 1.515521 GCAGGGGAAGACGGTTGTTG 61.516 60.000 0.00 0.00 0.00 3.33
2370 2482 1.228154 GCAGGGGAAGACGGTTGTT 60.228 57.895 0.00 0.00 0.00 2.83
2371 2483 2.430367 GCAGGGGAAGACGGTTGT 59.570 61.111 0.00 0.00 0.00 3.32
2372 2484 2.359975 GGCAGGGGAAGACGGTTG 60.360 66.667 0.00 0.00 0.00 3.77
2373 2485 3.647771 GGGCAGGGGAAGACGGTT 61.648 66.667 0.00 0.00 0.00 4.44
2374 2486 4.974438 TGGGCAGGGGAAGACGGT 62.974 66.667 0.00 0.00 0.00 4.83
2375 2487 2.706952 TTTTGGGCAGGGGAAGACGG 62.707 60.000 0.00 0.00 0.00 4.79
2376 2488 0.825840 TTTTTGGGCAGGGGAAGACG 60.826 55.000 0.00 0.00 0.00 4.18
2377 2489 0.679505 GTTTTTGGGCAGGGGAAGAC 59.320 55.000 0.00 0.00 0.00 3.01
2378 2490 0.471022 GGTTTTTGGGCAGGGGAAGA 60.471 55.000 0.00 0.00 0.00 2.87
2379 2491 0.762461 TGGTTTTTGGGCAGGGGAAG 60.762 55.000 0.00 0.00 0.00 3.46
2380 2492 0.326618 TTGGTTTTTGGGCAGGGGAA 60.327 50.000 0.00 0.00 0.00 3.97
2381 2493 1.051556 GTTGGTTTTTGGGCAGGGGA 61.052 55.000 0.00 0.00 0.00 4.81
2382 2494 1.449782 GTTGGTTTTTGGGCAGGGG 59.550 57.895 0.00 0.00 0.00 4.79
2383 2495 1.053835 AGGTTGGTTTTTGGGCAGGG 61.054 55.000 0.00 0.00 0.00 4.45
2384 2496 0.836606 AAGGTTGGTTTTTGGGCAGG 59.163 50.000 0.00 0.00 0.00 4.85
2385 2497 1.484240 TCAAGGTTGGTTTTTGGGCAG 59.516 47.619 0.00 0.00 0.00 4.85
2386 2498 1.573108 TCAAGGTTGGTTTTTGGGCA 58.427 45.000 0.00 0.00 0.00 5.36
2387 2499 2.928801 ATCAAGGTTGGTTTTTGGGC 57.071 45.000 0.00 0.00 0.00 5.36
2388 2500 3.181470 ACGAATCAAGGTTGGTTTTTGGG 60.181 43.478 0.00 0.00 30.22 4.12
2389 2501 3.801594 CACGAATCAAGGTTGGTTTTTGG 59.198 43.478 0.00 0.00 30.22 3.28
2390 2502 3.245048 GCACGAATCAAGGTTGGTTTTTG 59.755 43.478 0.00 0.00 30.22 2.44
2391 2503 3.132111 AGCACGAATCAAGGTTGGTTTTT 59.868 39.130 0.00 0.00 30.22 1.94
2392 2504 2.693074 AGCACGAATCAAGGTTGGTTTT 59.307 40.909 0.00 0.00 30.22 2.43
2393 2505 2.306847 AGCACGAATCAAGGTTGGTTT 58.693 42.857 0.00 0.00 30.22 3.27
2394 2506 1.981256 AGCACGAATCAAGGTTGGTT 58.019 45.000 0.00 0.00 33.40 3.67
2395 2507 1.880027 GAAGCACGAATCAAGGTTGGT 59.120 47.619 0.00 0.00 0.00 3.67
2396 2508 1.879380 TGAAGCACGAATCAAGGTTGG 59.121 47.619 0.00 0.00 0.00 3.77
2397 2509 2.921126 GTGAAGCACGAATCAAGGTTG 58.079 47.619 0.00 0.00 0.00 3.77
2412 2524 2.125512 CCCTCCGCTTCCGTGAAG 60.126 66.667 8.72 8.72 42.03 3.02
2413 2525 2.602267 TCCCTCCGCTTCCGTGAA 60.602 61.111 0.00 0.00 0.00 3.18
2414 2526 3.068691 CTCCCTCCGCTTCCGTGA 61.069 66.667 0.00 0.00 0.00 4.35
2415 2527 4.148825 CCTCCCTCCGCTTCCGTG 62.149 72.222 0.00 0.00 0.00 4.94
2418 2530 2.042230 TACCCTCCCTCCGCTTCC 60.042 66.667 0.00 0.00 0.00 3.46
2419 2531 1.381463 AGTACCCTCCCTCCGCTTC 60.381 63.158 0.00 0.00 0.00 3.86
2420 2532 1.381463 GAGTACCCTCCCTCCGCTT 60.381 63.158 0.00 0.00 0.00 4.68
2421 2533 2.279408 GAGTACCCTCCCTCCGCT 59.721 66.667 0.00 0.00 0.00 5.52
2422 2534 1.829096 GAGAGTACCCTCCCTCCGC 60.829 68.421 0.00 0.00 38.58 5.54
2423 2535 0.752376 GTGAGAGTACCCTCCCTCCG 60.752 65.000 1.49 0.00 38.58 4.63
2424 2536 0.397394 GGTGAGAGTACCCTCCCTCC 60.397 65.000 1.49 0.00 38.58 4.30
2425 2537 3.210733 GGTGAGAGTACCCTCCCTC 57.789 63.158 1.49 0.00 38.58 4.30
2432 2544 0.394625 AGCGAGAGGGTGAGAGTACC 60.395 60.000 0.00 0.00 40.10 3.34
2433 2545 3.178325 AGCGAGAGGGTGAGAGTAC 57.822 57.895 0.00 0.00 0.00 2.73
2440 2552 0.461548 TATGCTTCAGCGAGAGGGTG 59.538 55.000 0.00 0.00 45.83 4.61
2441 2553 0.461961 GTATGCTTCAGCGAGAGGGT 59.538 55.000 0.00 0.00 45.83 4.34
2442 2554 0.249657 GGTATGCTTCAGCGAGAGGG 60.250 60.000 0.00 0.00 45.83 4.30
2443 2555 0.249657 GGGTATGCTTCAGCGAGAGG 60.250 60.000 0.00 0.00 45.83 3.69
2444 2556 0.249657 GGGGTATGCTTCAGCGAGAG 60.250 60.000 0.00 0.00 45.83 3.20
2445 2557 0.687757 AGGGGTATGCTTCAGCGAGA 60.688 55.000 0.00 0.00 45.83 4.04
2446 2558 0.249657 GAGGGGTATGCTTCAGCGAG 60.250 60.000 0.00 0.00 45.83 5.03
2447 2559 0.687757 AGAGGGGTATGCTTCAGCGA 60.688 55.000 0.00 0.00 45.83 4.93
2448 2560 1.000283 CTAGAGGGGTATGCTTCAGCG 60.000 57.143 0.00 0.00 45.83 5.18
2449 2561 1.346068 CCTAGAGGGGTATGCTTCAGC 59.654 57.143 0.00 0.00 42.50 4.26
2462 2574 0.757188 ACTGTCGGATGCCCTAGAGG 60.757 60.000 0.00 0.00 39.47 3.69
2463 2575 0.671251 GACTGTCGGATGCCCTAGAG 59.329 60.000 0.00 0.00 0.00 2.43
2464 2576 0.755698 GGACTGTCGGATGCCCTAGA 60.756 60.000 1.07 0.00 0.00 2.43
2465 2577 1.742768 GGACTGTCGGATGCCCTAG 59.257 63.158 1.07 0.00 0.00 3.02
2466 2578 2.125326 CGGACTGTCGGATGCCCTA 61.125 63.158 9.52 0.00 0.00 3.53
2467 2579 3.461773 CGGACTGTCGGATGCCCT 61.462 66.667 9.52 0.00 0.00 5.19
2468 2580 3.432051 CTCGGACTGTCGGATGCCC 62.432 68.421 16.90 0.00 0.00 5.36
2469 2581 2.105128 CTCGGACTGTCGGATGCC 59.895 66.667 16.90 0.00 0.00 4.40
2470 2582 1.064946 CTCTCGGACTGTCGGATGC 59.935 63.158 16.90 0.00 0.00 3.91
2471 2583 0.748367 TCCTCTCGGACTGTCGGATG 60.748 60.000 16.90 12.79 33.30 3.51
2472 2584 1.608154 TCCTCTCGGACTGTCGGAT 59.392 57.895 16.90 0.00 33.30 4.18
2473 2585 3.075186 TCCTCTCGGACTGTCGGA 58.925 61.111 15.90 15.90 33.30 4.55
2481 2593 1.679305 GTCTGGCAGTCCTCTCGGA 60.679 63.158 15.27 0.00 36.83 4.55
2482 2594 1.326213 ATGTCTGGCAGTCCTCTCGG 61.326 60.000 15.27 0.00 0.00 4.63
2483 2595 0.179116 CATGTCTGGCAGTCCTCTCG 60.179 60.000 15.27 0.00 0.00 4.04
2484 2596 1.136695 CTCATGTCTGGCAGTCCTCTC 59.863 57.143 15.27 0.72 0.00 3.20
2485 2597 1.193323 CTCATGTCTGGCAGTCCTCT 58.807 55.000 15.27 0.00 0.00 3.69
2486 2598 0.177604 CCTCATGTCTGGCAGTCCTC 59.822 60.000 15.27 4.79 0.00 3.71
2487 2599 0.252421 TCCTCATGTCTGGCAGTCCT 60.252 55.000 15.27 0.00 0.00 3.85
2488 2600 0.615331 TTCCTCATGTCTGGCAGTCC 59.385 55.000 15.27 7.17 0.00 3.85
2489 2601 1.552337 TCTTCCTCATGTCTGGCAGTC 59.448 52.381 15.27 9.82 0.00 3.51
2490 2602 1.277557 GTCTTCCTCATGTCTGGCAGT 59.722 52.381 15.27 0.00 0.00 4.40
2491 2603 1.277273 TGTCTTCCTCATGTCTGGCAG 59.723 52.381 8.58 8.58 0.00 4.85
2492 2604 1.351076 TGTCTTCCTCATGTCTGGCA 58.649 50.000 0.00 0.00 0.00 4.92
2493 2605 2.286872 CATGTCTTCCTCATGTCTGGC 58.713 52.381 0.00 0.00 38.17 4.85
2494 2606 2.286872 GCATGTCTTCCTCATGTCTGG 58.713 52.381 7.55 0.00 42.94 3.86
2495 2607 2.286872 GGCATGTCTTCCTCATGTCTG 58.713 52.381 7.55 0.00 42.41 3.51
2496 2608 1.134580 CGGCATGTCTTCCTCATGTCT 60.135 52.381 8.46 0.00 43.18 3.41
2497 2609 1.293924 CGGCATGTCTTCCTCATGTC 58.706 55.000 0.00 4.49 42.94 3.06
2498 2610 0.615331 ACGGCATGTCTTCCTCATGT 59.385 50.000 0.00 0.00 42.94 3.21
2499 2611 1.012086 CACGGCATGTCTTCCTCATG 58.988 55.000 0.00 0.00 43.58 3.07
2500 2612 0.107508 CCACGGCATGTCTTCCTCAT 60.108 55.000 0.00 0.00 0.00 2.90
2501 2613 1.296392 CCACGGCATGTCTTCCTCA 59.704 57.895 0.00 0.00 0.00 3.86
2502 2614 1.450312 CCCACGGCATGTCTTCCTC 60.450 63.158 0.00 0.00 0.00 3.71
2503 2615 1.903877 CTCCCACGGCATGTCTTCCT 61.904 60.000 0.00 0.00 0.00 3.36
2504 2616 1.450312 CTCCCACGGCATGTCTTCC 60.450 63.158 0.00 0.00 0.00 3.46
2505 2617 1.021390 CACTCCCACGGCATGTCTTC 61.021 60.000 0.00 0.00 0.00 2.87
2506 2618 1.003355 CACTCCCACGGCATGTCTT 60.003 57.895 0.00 0.00 0.00 3.01
2507 2619 2.665000 CACTCCCACGGCATGTCT 59.335 61.111 0.00 0.00 0.00 3.41
2508 2620 2.436646 CCACTCCCACGGCATGTC 60.437 66.667 0.00 0.00 0.00 3.06
2514 2626 4.530857 GGATCGCCACTCCCACGG 62.531 72.222 0.00 0.00 0.00 4.94
2515 2627 4.873129 CGGATCGCCACTCCCACG 62.873 72.222 0.00 0.00 0.00 4.94
2516 2628 4.530857 CCGGATCGCCACTCCCAC 62.531 72.222 0.00 0.00 0.00 4.61
2520 2632 3.950794 TTGTGCCGGATCGCCACTC 62.951 63.158 5.05 0.00 0.00 3.51
2521 2633 4.015406 TTGTGCCGGATCGCCACT 62.015 61.111 5.05 0.00 0.00 4.00
2522 2634 3.799755 GTTGTGCCGGATCGCCAC 61.800 66.667 5.05 3.44 0.00 5.01
2523 2635 4.015406 AGTTGTGCCGGATCGCCA 62.015 61.111 5.05 0.00 0.00 5.69
2524 2636 3.499737 CAGTTGTGCCGGATCGCC 61.500 66.667 5.05 0.00 0.00 5.54
2525 2637 3.499737 CCAGTTGTGCCGGATCGC 61.500 66.667 5.05 0.00 0.00 4.58
2526 2638 3.499737 GCCAGTTGTGCCGGATCG 61.500 66.667 5.05 0.00 0.00 3.69
2527 2639 2.045926 AGCCAGTTGTGCCGGATC 60.046 61.111 5.05 0.00 0.00 3.36
2528 2640 1.836999 TACAGCCAGTTGTGCCGGAT 61.837 55.000 5.05 0.00 32.56 4.18
2529 2641 2.449031 CTACAGCCAGTTGTGCCGGA 62.449 60.000 5.05 0.00 32.56 5.14
2530 2642 2.031919 TACAGCCAGTTGTGCCGG 59.968 61.111 0.00 0.00 32.56 6.13
2531 2643 3.566261 CTACAGCCAGTTGTGCCG 58.434 61.111 0.00 0.00 32.56 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.