>input_sequence_76536
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-----------------------------------------ATGGCCCGCCATGAGAGCACCGGCCCCTGGGGCCTAGAC
CTGTTCGAGGCCATCGCCATCTTCGTCGCCGGGATCGGCATGGCCGCGCTGGCCGTAGACGGCTACCGGAGGAACCCCAG
CGTCGTCATCATCCTCCTAGGTGGTGCCCCCACCATCGTATTCTTCGCGATCGCTGCACGCGTGTGCACAGCTGCCCTTC
GCAAAAGGAGAGACGCCGAGGGTGCCGGCGGCGACGACGGTGGCGACGTGGAAAGGGGATTGAA------TACCGTTGCC
GGCCG---TCAGCGCGAGCCCGTCGTCAGCCGTTTGCCGCCAAGCGCGCTTGCCCAACTCCACGCCATGTACGCGGAACG
GGCACGCTCAGCTCAGGGCACCGATGACCTTGAGGAATGCGTTGTCTGCCTCGGCGAAGTGGGGAAAGGAGAGGAAACGA
GGCGGCTGCCGGTGTGCCGGCACGTGTTCCACAGGCAATGCGTCGAGCGGTGGCTGATGGAGCGCTCGACGTGCCCGGTA
TGCCGGCGCATCGTGCTCCGCGAGTCCCCGAACACATGA-----------------------------------------
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>chr7B_1_TraesCS7B01G235500
TCGAATTTGAAAAAATAGTTCATCAATTCTGAATATAGTTCACAAATTTTAAAAAAGTTCATCTATTTTGAAAAAAAGTT
CATCAAATTTTAGAAATAGTTTATCAGATTTGAGAAAAGTTCATAGAATTGGAAAAAAGTTCATTGAAATGGAAAAAAGT
TCATCATATTCAAAAAAAACTTCATGGAATTTCAAAAAAGTTCATCAAATTGAAAATAAGTTCATGCATTTTGAAAAATA
AAATAAGTTCATATGTTTGAAGGAAACATTCGCGAATTGCAAAAAGGAAAAAGGGACAGAGAAAAAAGAAACGAAAGGAG
AAAATATGTAAAAGAAGAAAAGAGAAGAAACATTTATCTGAACGCAAGAAGGTGTGGTTGCCGAGTGGTTAGTGCCCCTC
ACAGCCTAGTCGCTAATTACACGACGCTTCTGAATAAATCATCGATTGTTAGGGGGTCAGGCCCTGCTCGCCCCCGGCCT
CCGCCACTGGGAGATGATATCACGTGCTATATTCAATCTTGACTGACGGTCGCTAATAAGATAAGTCCTTAGTGTTCTTT
TGTCCAGCCGGTTGTGGCTTTGCGTTGTTTATTTTTTATTTCGCTTTTTTTGTGAGTTGTACTTTACATATCAGACTATT
TGTTTTGTTGAACTTGCTTTAATAAAGTAGCTGCATGCATCTTTTCGATACAAAAGCCGGGGATGACCTCCTTTTCAGAA
AAAAAAAACAC---------------------------------------------------------------------
----CTCTTCCCTACGAAAGAAAGAAA-AGGTTTTACATCTCATTCTTATGTGGAAAGTATTGAAAAGAAG-CTACTCGA
TCGATCTCATTCTCATCTGGAAAGTAGGTTCTTCTCAACAACAAAAAAATACTGGAAAGTAGGTTTCTCTTACGAAATCC
AAAACGGTTA--TATACAGATTAAGATTACAATGAT----CACGCCGTCAAGGAATATCCCAGATCAGATCAAAACCAAC
GAAGTGGGTGGGTGCTTCTGCGTCGAGCTATCGAGCACGCCATGGCCCGCCATGAGAGCACCGGCCCCTGGGGCCTAGAC
CTGTTCGAGGCCATCGCCATCTTCGTCGCCGGGATCGGCATGGCCGCGCTGGCCGTAGACGGCTACCGGAGGAACCCCAG
CGTCGTCATCATCCTCCTAGGTGGTGCCCCCACCATCGTATTCTTCGCGATCGCTGCACGCGTGTGCACAGCTGCCCTTC
GCAAAAGGAGAGACGCCGAGGGTGCCGGCGGCGACGACGGTGGCGACGTGGAAAGGGGATTGAA------TACCGTTGCC
GGCCG---TCAGCGCGAGCCCGTCGTCAGCCGTTTGCCGCCAAGCGCGCTTGCCCAACTCCACGCCATGTACGCGGAACG
GGCACGCTCAGCTCAGGGCACCGATGACCTTGAGGAATGCGTTGTCTGCCTCGGCGAAGTGGGGAAAGGAGAGGAAACGA
GGCGGCTGCCGGTGTGCCGGCACGTGTTCCACAGGCAATGCGTCGAGCGGTGGCTGATGGAGCGCTCGACGTGCCCGGTA
TGCCGGCGCATCGTGCTCCGCGAGTCCCCGAACACATGAC-----------GCTTTGCTTGAACTGTTTTGTGGATAACA
GTTGGAACACTTTGTGTGTTGCTTTCCTTGGGATGGTGAACTTGTATGAGAATCTCAAATTCTACCCGGTCGCTGTCGAG
AGACCAGCGAATCAGGCACCACATGCAGTTCTGAGAGAAGATTTTGAAAC-AATCAATACATTTGTTTAGGGTGTTCCTC
ATGCATCCTGGCTAAGTTAATTTTTGCTGCAGTCTATTTTTCAGATTTAATTACTTAGTGCATCTCTAACGCCGACCCTT
AAACGACCCGCGGACGTTCGGACCGCGTGGTCCTGATGTGTTTTGA--------CATGCCTGCATCAGTCCGTTCGGCGG
TACAAACACACTTCTCCAA-CAAACGGAAGATAAATTGGAGGGTTTTCGGGAGCGTCCGAATCGTTGCAACGTCCACGTC
TGACTAACCTGCCCACCAAAAACCCCTTTCCTGCGCCCACTCGCGTTTACTTCGAAGCCAGTTGCCCGCATTCATGCCGG
CCCAAGGCAGAAGCGACCGCTCACTGGAGCCGGCATTGAAGCGGCTTGCCGCCCGCTGATCGCCGCCTTCTCTCTGCATT
GAAACATCCATGCCGGCAGAGGCCACCCTGTAAATCCTCTGTGATCAATGTCGGCAACACGTCAGGCAGGAGGGGAAAGA
AGCCATGCAGGCAAAGGCCGGCACGTCCGCAACCACCGCGGGCACCGAGGAAAAGTAGATCATGGGAGGCCGCCGCCACT
CGGGTCCCACGAAGGCCACCGCCACCACGTTGCCGGGTTACACAGCCGGCATTTTACCTGGTGAGCGGGGGCGTAGACCA
CAACAACCGTCTTCCCCTGCCCAAAAACCAACCTTGATTCGTGCTTCACGGAAGCGGAGGGAGGGTACTCTCACCCTCTC
GCTGAAGCATACCCCTCTAGGGCATCCGACAGTCCGAGAGGACTGCCAGACATGAGGAAGACATGCCGTGGGAGTGGCGA
TCCGGCACAACTGGCTGTAG
>chr7D_725
CTGGAAAGTAGGTTTCTCTTACGAAATCCAAAACGGTTATACAGATAAAGATTACAATGATCACGCCGTCAAGGAATATC
GAGATCAGATCAAAACCTACGAAGTGGGTGGGTGCTTCTGCGTCGAGCTATCGAGCACGCCATTAGCACATGGCGTTAGC
TTTAATTTGCACAAATCAGGAAATCTATCCTTTCGTAAATGTAATCAAACAAGATCTCCAGGTACAACACAACACATTTT
CTACCTTTATTATTCAATGCGGTCAAAATATTCAGTGGTCAAGGATCAAGCGGTCAATAGACAACCGATTGATCGAGCCT
CACTGTAGTGCGAAGCAAGTGGCCGTGCTTAAGACTAGTTACAATGAGGAGTAACTTAGAGTAGTAACATGCACATGTTA
CTAGTCTATGCTACTACTTCTATAGTGGGGAGTAACATATGTGTGGTGTCATGCATCACATCCTTTATTAGGTTGTAGAC
TCATCTTATCTTGATATATGTGATGTTACAGTAACTAGCTATGTTACCACACACCTCTTTTTTTCATTAATTACTTAGCA
CATCATCTATTTTGCCTAAATATGTGTGATGTTACCACTTATATTATTCCCACTGTGGGTAGTCTAGGCTAGCCCAAGCG
ACCTTGCCCGAGCGCGGGCCGGCAAACTGGCGCATAACGGCATAAGGCGCCGTATATGAGGTCTCATGGTACCGTGCTCT
ACCATGTTGCATACTCCTCAAAGTTTTACTCCCTCCCTAATGAACTGCAAAGATATCTTATAGTTAAGTACATAGGTAAT
ACATCTCTTCCCTACGAAAGAAAAAAAGAGGTTTTACATCTCATTCTCATCTGAAAAGTATTGAAAAAAAAACTACTCGA
TCGATCTCATTCTCATCTGGAAAGTAGGTTCTTCTAAAAAAAAAA-----ACTGGAAAGTAGGTTTCTCTTACGAAATCC
AAAACGGTTATATATACAGATAAAGATTACAATGAT----CACGCCGTCAAGGAATATCG-AGATCAGATCAAAACCTTC
GAAGTGGGTGGGTGCTTCTGCGTCGAGCTATCGAGCACGGCATGGCCCGCCACGAGAGCACCGGCCCCTGGGGCCTAGAG
CTGTTCGAGGCCATCGCCATCTTCGTCGCCGGGATCGGCATGGCCGCCCTGGCCATAGACGGCTACCGGAGGAACCCCAG
CGTCATCATCATCCTCCTAGGTGGTGCCCCCACCATCGTATTCTTCGCGATCGCTGCACGCGTGTGCACAGCTGCCCTTC
GCAAAAGGAGAGACGCCCACGGCGCCGGTGGCAACGACGGCGGCGACGTGGAAAGAGGCTTGGA------CACCGTTGCC
GGCCGTCATCAGCTCGAGCCCGTCGTCTGCCGTTTGCCGCCAACTGCGCTCGCCCAACTCCACGCCATCTACGCGGAACG
GGCACGCTCAGCTCAGGGCGCCGACGACCTCGAGGAATGCGTCGTCTGCCTCGGCGAAGTGGGGAAAGGAGAGGAAATGA
GGCGGCTGCCGGTCTGCCGGCACGTGTTCCACAAGCAATGCATCGAGCGGTGGCTGATCGAGCGCTCGACGTGCCCGGTA
TGTCGTCGCATCGTGCTCCGCGAGTGCCCGAACACCTGACT------TGAAGCTTTGCTTAAC-TG-TTTGTGGATGATA
GTTGCAACACTTTGTGTGTTGCTTTCTTTGGGATGGTGAACTTGTATGAGAATCTCAAATCCTACCCAGCCACTGTCGAG
AGACCAGAGTATCAGGCGCCGCTTGCAGTTCTGAGAGAAG----------------------------------------
-------------------ATTTTTGTTGCAGTCTATT--TCAGATTTATTTACTTAAGT-ATCTCCAACACCGACTCTC
AAACGACCCGCAGCCGTCTGGATTGCACGGTCCGGATGTGTTTTCCATCTAAGGCAGGCCTGCATCGGTCCGTTCGGTGG
TTCAGACACACTTTTTTCCGCAAACCGAAAACAATTTGGAGGGTTTTTGGGAGCGTCCGGATCGCTGCCACGTCCACGTC
TGACTAACCTGCCCACCAAAAACCCCTTTCGTGCACCCGCTCGCGTTCACC-CGAAGCCAGCTGCCCGCATTCATGCCGG
CCCAAGGCGGAAGCGACCACTCACTGGAGTCGGCATTGAAGCGGCTCGCCGCCCACTGATCGCCGCCTTCTCTCCGCATT
GACACGTCCATGCCGGTGGAGGCCACCCTGTAAATCCGCTGTGATCGATGTCGGCAACACGTCAGGCAGGTGGGGAAAGA
AGCCATGCAGGCAAAGGCCGGCATGTCTGCGGCCACCATGGACACCGAGGAAAAGTACATCATGAGAGGCCGCCGCCGCT
CAGGTCCCATGAAGGCCAC-------------------------------------------------------------
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>chr7A_857
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---------------------------------------------------CTGGAAAGTAGGTTTCTCTTACGAAATCC
AAAACGGTTAT---TACAGATAAAGATTACAATGATTTATCACGCCGTCAAGGAATATCA-AGATTAGATCAAAACCTTC
GAAGTGGGTGGGTGC------GTCGAGCTATCGAGCACGCCATGGCCCGCCACGAGAGCACCGGCCCCTGGGGCCTAGAG
CTGTTCGAGGCCATCGCCATCTTCGTCGCCGGGATCGGCATGGCCGCGCTGGCCATAGACGGCTACCTGAGGAACCCCAG
CGTCGCCATCATCCTCCTAGGCGGTGCCCCCACCCTCGTATTCTTCGCGATCGCTGCACGCGTGTGCACAGTTGCCCTTC
GCAAGAGGAGAGACGACCAGGGCGCCG------ACGATGGCGGCGACGTCGAAAGAGGCTTGAATTTAAATACCGTTGCC
GGCTG---TCAGCGCGAGCCCGTCGTCAGCCGTCTGCCGCCAAGCGCGCTCGCCCAACTCCACGCCATCTACGCGAAGCG
GGCACGCTCAGCTCAGGGCGCCGACGACCTCGAGGAATGCGTCGTCTGCCTCGGCGAAGTGTTAAAAGGAGAGGACACGA
GGCGGCTGCCGGTGTGCCGGCACGTGTTCCACAGGCAATGCGTCGAGCGGTGGCTGATCGAGCGCTCGACGTGCCCGGTA
TGCCGGCGCATCGTGCTCCGCGAGTCCCCGAACACCTGACCCTGACCTGAAGCTTTGCTTGACCTG-TTTGTGGATAAAA
GTTGCAACACTTTGCGTGTTGCTTTCCTTGGGATGGTGAACTTGTATGAGAATCTCAAATTCTACCCGGTCACTGTGGAC
TCGTA---------------------------GGGAGACGATTTTGAAACAAATCAATACATTTGTTTAGGGTGTTCCTC
ATGCATCCTGGTTGAGTTAATTTTTGTTGCAGTCTATT--CCAGATTTATTTAATTAG----------------------
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>SNPs
SS-S-SSSS-SSSSSSSS--SSSS---S-SS--SSSSSS-SSSS-SSSSS-SS-S-S-SSSSSSSSSS-S--SS--SS-S
S-SSSS-SS-S-S--SSSSSSS-SSS-S-SS-S-SSSSSSSSSSSSSS-SSSS-SS-S-SSSS-S-S-SSS-SSSSS--S
-SSSSS-SSSSS---SS-SSSSSSSSSSSS--SSSS---SS-S------SSSS-SS-SSSSSS-SSSSSSSSS-S-SS-S
SS-SSSS-SSSSS-SSS--SS-SS--S--SSS-SSSSSS---SS-SS--SSS-SS-SSSSSS--SSSSSSSSSSS--SSS
S-SSSSS--SSS-SSSS-SSS-SSSS-SSSS-SSSSSS-S-SSSSS--S--SSSSSSSSSSSSSSSSSS-SSSSSSSS-S
SS--S---SS-SSSS-S-S-SSS-SSSSSSS-S-SS-SSSS-SSSS---S-S-SSSSSSSS--S-SS-SSSSSSSSSSSS
S-SS-SSSSSSS---SSSSSSSSSSSSSSSS-SSSSSSS-SSS-S--SSSSSSSSSSSSSS-SSSSSSSSSSSS--SSSS
SS--SSSSSSS---SSSSSS-SS--SSSS-S--SSSSS--SSSS-S--SSSSSSSSSS---S-S--SSSSSSSSSSSSSS
SSS--SSSS--S-SS-SSSSSSS---S-S--SSSSSS-SS-S-SSS-SSS-SS-SSSSS--SS-S-SSSSSSSS-SSSSS
-SS-SSSSSSS---------------------------------------------------------------------
-----------------------S-----------------------S--S--S-------------S--S---------
-----------------------------------S--S--S---SSSSS------------------------------
---------------------S-------------------------------------SS----------------SS-
----------------------------------------------------S--------------------------S
------------------------------------------------------S-------------------------
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-----------------S----S-----S---S-------S--------------S--S---------------------
--------------------------------------------------S-----------------S-----------
-------------------S----S-----S-----------S-------------------------------------
----------------------------------------------------------S---------------------
-----------------------------------S--------------------------S---S-----------S-
----S------------------------------------------------------------------S--------
-------S-S-------S--S-S---------------------------------------------------------
-----------S-S------------S-----------SS---------S--------SSS-----S---S-----S--S
-----------S-S---SS---SS--SS-----S----------SS----------S---------S----------S--
-S--S--------S-SSSS------S---S-S--S------------S-----------S----S---S-----------
------------------------------S---S---S--------S--SS---------S------------------
--------S---------S----------S----------------S-------S-------------------S-----
--S--S----------SS-------------------S--------S-----------------------S---------
-----------------------S---S--SS-----SS--S---------------S------S------------S--
-S-------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS
>forward_576
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----------------------------------------------------------------------------CTTT
TGTCCAGCCGGTTGTG----------------------------------------------------------------
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>reverse_2451
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--------------------------------------------------ATTTTACCTGGTGAGCGGGG----------
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