Multiple sequence alignment - TraesCS7B01G228000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G228000 chr7B 100.000 2648 0 0 1 2648 428162256 428164903 0.000000e+00 4891.0
1 TraesCS7B01G228000 chr7D 95.471 1126 37 8 644 1761 413728322 413729441 0.000000e+00 1784.0
2 TraesCS7B01G228000 chr7A 93.027 1133 46 18 644 1761 475803992 475805106 0.000000e+00 1624.0
3 TraesCS7B01G228000 chr7A 89.670 910 67 8 1762 2648 722435271 722436176 0.000000e+00 1134.0
4 TraesCS7B01G228000 chr6B 94.846 912 25 1 1759 2648 19549632 19550543 0.000000e+00 1404.0
5 TraesCS7B01G228000 chr1D 91.218 911 55 9 1761 2648 70494090 70494998 0.000000e+00 1216.0
6 TraesCS7B01G228000 chr4A 90.122 658 42 8 2012 2648 662453169 662453824 0.000000e+00 833.0
7 TraesCS7B01G228000 chr4A 95.025 201 10 0 1762 1962 662452964 662453164 1.530000e-82 316.0
8 TraesCS7B01G228000 chr2B 92.096 291 11 1 1 279 698224102 698224392 1.480000e-107 399.0
9 TraesCS7B01G228000 chr2B 86.000 150 18 3 87 234 34808531 34808383 9.810000e-35 158.0
10 TraesCS7B01G228000 chr2B 88.372 129 14 1 1762 1890 726227685 726227812 1.270000e-33 154.0
11 TraesCS7B01G228000 chr4B 93.077 130 6 1 1762 1891 63944758 63944632 1.250000e-43 187.0
12 TraesCS7B01G228000 chr5B 84.940 166 18 7 105 264 683571562 683571398 7.590000e-36 161.0
13 TraesCS7B01G228000 chrUn 86.000 150 18 3 87 234 240839638 240839490 9.810000e-35 158.0
14 TraesCS7B01G228000 chrUn 87.736 106 10 3 131 234 349774394 349774290 1.290000e-23 121.0
15 TraesCS7B01G228000 chrUn 87.736 106 10 3 131 234 349776690 349776586 1.290000e-23 121.0
16 TraesCS7B01G228000 chrUn 87.736 106 10 3 131 234 447158296 447158400 1.290000e-23 121.0
17 TraesCS7B01G228000 chr1B 86.364 132 13 4 1761 1890 546701686 546701558 3.550000e-29 139.0
18 TraesCS7B01G228000 chr6D 77.551 147 29 4 88 233 16747218 16747361 4.700000e-13 86.1
19 TraesCS7B01G228000 chr6D 84.810 79 8 4 1757 1832 51336421 51336344 2.830000e-10 76.8
20 TraesCS7B01G228000 chr6D 86.111 72 8 2 1762 1832 51337737 51337667 2.830000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G228000 chr7B 428162256 428164903 2647 False 4891.0 4891 100.0000 1 2648 1 chr7B.!!$F1 2647
1 TraesCS7B01G228000 chr7D 413728322 413729441 1119 False 1784.0 1784 95.4710 644 1761 1 chr7D.!!$F1 1117
2 TraesCS7B01G228000 chr7A 475803992 475805106 1114 False 1624.0 1624 93.0270 644 1761 1 chr7A.!!$F1 1117
3 TraesCS7B01G228000 chr7A 722435271 722436176 905 False 1134.0 1134 89.6700 1762 2648 1 chr7A.!!$F2 886
4 TraesCS7B01G228000 chr6B 19549632 19550543 911 False 1404.0 1404 94.8460 1759 2648 1 chr6B.!!$F1 889
5 TraesCS7B01G228000 chr1D 70494090 70494998 908 False 1216.0 1216 91.2180 1761 2648 1 chr1D.!!$F1 887
6 TraesCS7B01G228000 chr4A 662452964 662453824 860 False 574.5 833 92.5735 1762 2648 2 chr4A.!!$F1 886

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
217 218 0.033366 GCTGGAACCGGCAAATGTTT 59.967 50.0 18.38 0.0 46.81 2.83 F
333 334 0.035439 CTGTGGAACCCGCCTATGTT 60.035 55.0 0.00 0.0 34.36 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1260 1272 1.301009 GATGGCGATCCGGGAGTTC 60.301 63.158 0.0 0.0 34.14 3.01 R
2140 2159 1.808512 CGGTGGTGCAAGTCAACTACA 60.809 52.381 0.0 0.0 32.28 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.506886 CTTCAACGAGTACTGGAGACTT 57.493 45.455 12.28 0.00 0.00 3.01
22 23 4.872664 CTTCAACGAGTACTGGAGACTTT 58.127 43.478 12.28 0.00 0.00 2.66
23 24 4.931661 TCAACGAGTACTGGAGACTTTT 57.068 40.909 12.28 0.00 0.00 2.27
24 25 4.617959 TCAACGAGTACTGGAGACTTTTG 58.382 43.478 12.28 4.80 0.00 2.44
25 26 4.098960 TCAACGAGTACTGGAGACTTTTGT 59.901 41.667 12.28 0.00 0.00 2.83
35 36 2.895039 GACTTTTGTCTGGCGTCGA 58.105 52.632 0.00 0.00 45.55 4.20
36 37 0.507358 GACTTTTGTCTGGCGTCGAC 59.493 55.000 5.18 5.18 45.55 4.20
37 38 0.104304 ACTTTTGTCTGGCGTCGACT 59.896 50.000 14.70 0.00 32.70 4.18
38 39 1.217882 CTTTTGTCTGGCGTCGACTT 58.782 50.000 14.70 0.00 32.70 3.01
39 40 1.597663 CTTTTGTCTGGCGTCGACTTT 59.402 47.619 14.70 0.00 32.70 2.66
40 41 1.658994 TTTGTCTGGCGTCGACTTTT 58.341 45.000 14.70 0.00 32.70 2.27
41 42 1.214367 TTGTCTGGCGTCGACTTTTC 58.786 50.000 14.70 0.91 32.70 2.29
42 43 0.387929 TGTCTGGCGTCGACTTTTCT 59.612 50.000 14.70 0.00 32.70 2.52
43 44 0.784778 GTCTGGCGTCGACTTTTCTG 59.215 55.000 14.70 0.00 0.00 3.02
44 45 0.319555 TCTGGCGTCGACTTTTCTGG 60.320 55.000 14.70 0.00 0.00 3.86
45 46 0.319555 CTGGCGTCGACTTTTCTGGA 60.320 55.000 14.70 0.00 0.00 3.86
46 47 0.105224 TGGCGTCGACTTTTCTGGAA 59.895 50.000 14.70 0.00 0.00 3.53
47 48 0.511653 GGCGTCGACTTTTCTGGAAC 59.488 55.000 14.70 0.00 0.00 3.62
48 49 1.499049 GCGTCGACTTTTCTGGAACT 58.501 50.000 14.70 0.00 0.00 3.01
49 50 1.192534 GCGTCGACTTTTCTGGAACTG 59.807 52.381 14.70 0.00 0.00 3.16
50 51 1.792949 CGTCGACTTTTCTGGAACTGG 59.207 52.381 14.70 0.00 0.00 4.00
51 52 1.531578 GTCGACTTTTCTGGAACTGGC 59.468 52.381 8.70 0.00 0.00 4.85
52 53 1.416401 TCGACTTTTCTGGAACTGGCT 59.584 47.619 0.00 0.00 0.00 4.75
53 54 1.532868 CGACTTTTCTGGAACTGGCTG 59.467 52.381 0.00 0.00 0.00 4.85
54 55 2.806745 CGACTTTTCTGGAACTGGCTGA 60.807 50.000 0.00 0.00 0.00 4.26
55 56 3.416156 GACTTTTCTGGAACTGGCTGAT 58.584 45.455 0.00 0.00 0.00 2.90
56 57 3.823304 GACTTTTCTGGAACTGGCTGATT 59.177 43.478 0.00 0.00 0.00 2.57
57 58 3.823304 ACTTTTCTGGAACTGGCTGATTC 59.177 43.478 0.00 0.00 0.00 2.52
58 59 2.099141 TTCTGGAACTGGCTGATTCG 57.901 50.000 0.00 0.00 0.00 3.34
59 60 0.976641 TCTGGAACTGGCTGATTCGT 59.023 50.000 0.00 0.00 0.00 3.85
60 61 1.347707 TCTGGAACTGGCTGATTCGTT 59.652 47.619 0.00 0.00 0.00 3.85
61 62 2.154462 CTGGAACTGGCTGATTCGTTT 58.846 47.619 0.00 0.00 0.00 3.60
62 63 1.879380 TGGAACTGGCTGATTCGTTTG 59.121 47.619 0.00 0.00 0.00 2.93
63 64 1.401539 GGAACTGGCTGATTCGTTTGC 60.402 52.381 0.00 0.00 0.00 3.68
64 65 1.537202 GAACTGGCTGATTCGTTTGCT 59.463 47.619 0.00 0.00 0.00 3.91
65 66 2.472695 ACTGGCTGATTCGTTTGCTA 57.527 45.000 0.00 0.00 0.00 3.49
66 67 2.076863 ACTGGCTGATTCGTTTGCTAC 58.923 47.619 0.00 0.00 0.00 3.58
67 68 2.076100 CTGGCTGATTCGTTTGCTACA 58.924 47.619 0.00 0.00 0.00 2.74
68 69 2.483877 CTGGCTGATTCGTTTGCTACAA 59.516 45.455 0.00 0.00 0.00 2.41
69 70 3.081061 TGGCTGATTCGTTTGCTACAAT 58.919 40.909 0.00 0.00 0.00 2.71
70 71 3.126858 TGGCTGATTCGTTTGCTACAATC 59.873 43.478 0.00 0.00 0.00 2.67
71 72 3.487544 GGCTGATTCGTTTGCTACAATCC 60.488 47.826 0.00 0.00 0.00 3.01
72 73 3.126858 GCTGATTCGTTTGCTACAATCCA 59.873 43.478 0.00 0.00 0.00 3.41
73 74 4.651994 CTGATTCGTTTGCTACAATCCAC 58.348 43.478 0.00 0.00 0.00 4.02
74 75 4.323417 TGATTCGTTTGCTACAATCCACT 58.677 39.130 0.00 0.00 0.00 4.00
75 76 5.483811 TGATTCGTTTGCTACAATCCACTA 58.516 37.500 0.00 0.00 0.00 2.74
76 77 5.350365 TGATTCGTTTGCTACAATCCACTAC 59.650 40.000 0.00 0.00 0.00 2.73
77 78 3.592059 TCGTTTGCTACAATCCACTACC 58.408 45.455 0.00 0.00 0.00 3.18
78 79 2.347452 CGTTTGCTACAATCCACTACCG 59.653 50.000 0.00 0.00 0.00 4.02
79 80 3.592059 GTTTGCTACAATCCACTACCGA 58.408 45.455 0.00 0.00 0.00 4.69
80 81 3.965379 TTGCTACAATCCACTACCGAA 57.035 42.857 0.00 0.00 0.00 4.30
81 82 3.520290 TGCTACAATCCACTACCGAAG 57.480 47.619 0.00 0.00 0.00 3.79
82 83 2.829720 TGCTACAATCCACTACCGAAGT 59.170 45.455 0.00 0.00 39.81 3.01
83 84 3.259876 TGCTACAATCCACTACCGAAGTT 59.740 43.478 0.00 0.00 35.76 2.66
84 85 4.251268 GCTACAATCCACTACCGAAGTTT 58.749 43.478 0.00 0.00 35.76 2.66
85 86 4.694037 GCTACAATCCACTACCGAAGTTTT 59.306 41.667 0.00 0.00 35.76 2.43
86 87 5.180680 GCTACAATCCACTACCGAAGTTTTT 59.819 40.000 0.00 0.00 35.76 1.94
107 108 4.920640 TTTTTGCTGGAACCACGATTAA 57.079 36.364 0.00 0.00 0.00 1.40
108 109 5.461032 TTTTTGCTGGAACCACGATTAAT 57.539 34.783 0.00 0.00 0.00 1.40
109 110 5.461032 TTTTGCTGGAACCACGATTAATT 57.539 34.783 0.00 0.00 0.00 1.40
110 111 5.461032 TTTGCTGGAACCACGATTAATTT 57.539 34.783 0.00 0.00 0.00 1.82
111 112 5.461032 TTGCTGGAACCACGATTAATTTT 57.539 34.783 0.00 0.00 0.00 1.82
112 113 5.461032 TGCTGGAACCACGATTAATTTTT 57.539 34.783 0.00 0.00 0.00 1.94
113 114 5.226396 TGCTGGAACCACGATTAATTTTTG 58.774 37.500 0.00 0.00 0.00 2.44
114 115 4.091365 GCTGGAACCACGATTAATTTTTGC 59.909 41.667 0.00 0.00 0.00 3.68
115 116 5.461032 TGGAACCACGATTAATTTTTGCT 57.539 34.783 0.00 0.00 0.00 3.91
116 117 5.226396 TGGAACCACGATTAATTTTTGCTG 58.774 37.500 0.00 0.00 0.00 4.41
117 118 4.625311 GGAACCACGATTAATTTTTGCTGG 59.375 41.667 0.00 0.00 0.00 4.85
118 119 5.461032 AACCACGATTAATTTTTGCTGGA 57.539 34.783 0.00 0.00 0.00 3.86
119 120 5.461032 ACCACGATTAATTTTTGCTGGAA 57.539 34.783 0.00 0.00 0.00 3.53
120 121 5.227152 ACCACGATTAATTTTTGCTGGAAC 58.773 37.500 0.00 0.00 0.00 3.62
121 122 4.323336 CCACGATTAATTTTTGCTGGAACG 59.677 41.667 0.00 0.00 0.00 3.95
122 123 4.323336 CACGATTAATTTTTGCTGGAACGG 59.677 41.667 0.00 0.00 38.10 4.44
123 124 4.216687 ACGATTAATTTTTGCTGGAACGGA 59.783 37.500 0.00 0.00 36.31 4.69
124 125 4.557301 CGATTAATTTTTGCTGGAACGGAC 59.443 41.667 0.00 0.00 36.31 4.79
125 126 4.920640 TTAATTTTTGCTGGAACGGACA 57.079 36.364 0.00 0.00 36.31 4.02
126 127 3.810310 AATTTTTGCTGGAACGGACAA 57.190 38.095 0.00 0.00 36.31 3.18
127 128 3.810310 ATTTTTGCTGGAACGGACAAA 57.190 38.095 0.00 0.00 38.32 2.83
128 129 3.810310 TTTTTGCTGGAACGGACAAAT 57.190 38.095 0.00 0.00 39.22 2.32
129 130 3.363341 TTTTGCTGGAACGGACAAATC 57.637 42.857 0.00 0.00 39.22 2.17
130 131 2.270352 TTGCTGGAACGGACAAATCT 57.730 45.000 0.00 0.00 36.31 2.40
131 132 2.270352 TGCTGGAACGGACAAATCTT 57.730 45.000 0.00 0.00 36.31 2.40
132 133 2.582052 TGCTGGAACGGACAAATCTTT 58.418 42.857 0.00 0.00 36.31 2.52
133 134 2.955660 TGCTGGAACGGACAAATCTTTT 59.044 40.909 0.00 0.00 36.31 2.27
134 135 3.383185 TGCTGGAACGGACAAATCTTTTT 59.617 39.130 0.00 0.00 36.31 1.94
135 136 3.735746 GCTGGAACGGACAAATCTTTTTG 59.264 43.478 0.00 0.00 40.97 2.44
136 137 3.712187 TGGAACGGACAAATCTTTTTGC 58.288 40.909 0.00 0.00 45.01 3.68
137 138 3.383185 TGGAACGGACAAATCTTTTTGCT 59.617 39.130 0.00 0.00 45.01 3.91
138 139 4.142049 TGGAACGGACAAATCTTTTTGCTT 60.142 37.500 0.00 0.00 45.01 3.91
139 140 4.444388 GGAACGGACAAATCTTTTTGCTTC 59.556 41.667 0.00 0.00 45.01 3.86
140 141 4.647424 ACGGACAAATCTTTTTGCTTCA 57.353 36.364 0.00 0.00 45.01 3.02
141 142 5.004922 ACGGACAAATCTTTTTGCTTCAA 57.995 34.783 0.00 0.00 45.01 2.69
142 143 4.803613 ACGGACAAATCTTTTTGCTTCAAC 59.196 37.500 0.00 0.00 45.01 3.18
143 144 4.209080 CGGACAAATCTTTTTGCTTCAACC 59.791 41.667 0.00 0.00 45.01 3.77
144 145 5.115480 GGACAAATCTTTTTGCTTCAACCA 58.885 37.500 0.00 0.00 45.01 3.67
145 146 5.234972 GGACAAATCTTTTTGCTTCAACCAG 59.765 40.000 0.00 0.00 45.01 4.00
146 147 5.733676 ACAAATCTTTTTGCTTCAACCAGT 58.266 33.333 0.00 0.00 45.01 4.00
147 148 6.872920 ACAAATCTTTTTGCTTCAACCAGTA 58.127 32.000 0.00 0.00 45.01 2.74
148 149 6.756542 ACAAATCTTTTTGCTTCAACCAGTAC 59.243 34.615 0.00 0.00 45.01 2.73
149 150 6.463995 AATCTTTTTGCTTCAACCAGTACA 57.536 33.333 0.00 0.00 0.00 2.90
150 151 5.499139 TCTTTTTGCTTCAACCAGTACAG 57.501 39.130 0.00 0.00 0.00 2.74
151 152 4.338118 TCTTTTTGCTTCAACCAGTACAGG 59.662 41.667 2.14 2.14 0.00 4.00
152 153 3.569194 TTTGCTTCAACCAGTACAGGA 57.431 42.857 11.86 0.00 0.00 3.86
153 154 2.839486 TGCTTCAACCAGTACAGGAG 57.161 50.000 11.86 3.38 0.00 3.69
154 155 2.325484 TGCTTCAACCAGTACAGGAGA 58.675 47.619 11.86 5.77 0.00 3.71
155 156 2.906389 TGCTTCAACCAGTACAGGAGAT 59.094 45.455 11.86 0.00 0.00 2.75
156 157 3.327757 TGCTTCAACCAGTACAGGAGATT 59.672 43.478 11.86 0.00 0.00 2.40
157 158 4.202461 TGCTTCAACCAGTACAGGAGATTT 60.202 41.667 11.86 0.00 0.00 2.17
158 159 4.762251 GCTTCAACCAGTACAGGAGATTTT 59.238 41.667 11.86 0.00 0.00 1.82
159 160 5.241728 GCTTCAACCAGTACAGGAGATTTTT 59.758 40.000 11.86 0.00 0.00 1.94
160 161 6.633500 TTCAACCAGTACAGGAGATTTTTG 57.367 37.500 11.86 4.19 0.00 2.44
161 162 5.690865 TCAACCAGTACAGGAGATTTTTGT 58.309 37.500 11.86 0.00 0.00 2.83
162 163 6.126409 TCAACCAGTACAGGAGATTTTTGTT 58.874 36.000 11.86 0.00 0.00 2.83
163 164 6.605594 TCAACCAGTACAGGAGATTTTTGTTT 59.394 34.615 11.86 0.00 0.00 2.83
164 165 6.391227 ACCAGTACAGGAGATTTTTGTTTG 57.609 37.500 11.86 0.00 0.00 2.93
165 166 5.301805 ACCAGTACAGGAGATTTTTGTTTGG 59.698 40.000 11.86 0.00 35.86 3.28
166 167 5.301805 CCAGTACAGGAGATTTTTGTTTGGT 59.698 40.000 0.00 0.00 0.00 3.67
167 168 6.183360 CCAGTACAGGAGATTTTTGTTTGGTT 60.183 38.462 0.00 0.00 0.00 3.67
168 169 7.264947 CAGTACAGGAGATTTTTGTTTGGTTT 58.735 34.615 0.00 0.00 0.00 3.27
169 170 7.435192 CAGTACAGGAGATTTTTGTTTGGTTTC 59.565 37.037 0.00 0.00 0.00 2.78
170 171 5.348164 ACAGGAGATTTTTGTTTGGTTTCG 58.652 37.500 0.00 0.00 0.00 3.46
171 172 5.126384 ACAGGAGATTTTTGTTTGGTTTCGA 59.874 36.000 0.00 0.00 0.00 3.71
172 173 6.183360 ACAGGAGATTTTTGTTTGGTTTCGAT 60.183 34.615 0.00 0.00 0.00 3.59
173 174 6.701400 CAGGAGATTTTTGTTTGGTTTCGATT 59.299 34.615 0.00 0.00 0.00 3.34
174 175 7.224557 CAGGAGATTTTTGTTTGGTTTCGATTT 59.775 33.333 0.00 0.00 0.00 2.17
175 176 7.768582 AGGAGATTTTTGTTTGGTTTCGATTTT 59.231 29.630 0.00 0.00 0.00 1.82
176 177 8.394877 GGAGATTTTTGTTTGGTTTCGATTTTT 58.605 29.630 0.00 0.00 0.00 1.94
177 178 9.209297 GAGATTTTTGTTTGGTTTCGATTTTTG 57.791 29.630 0.00 0.00 0.00 2.44
178 179 7.696035 AGATTTTTGTTTGGTTTCGATTTTTGC 59.304 29.630 0.00 0.00 0.00 3.68
179 180 6.487689 TTTTGTTTGGTTTCGATTTTTGCT 57.512 29.167 0.00 0.00 0.00 3.91
180 181 5.462034 TTGTTTGGTTTCGATTTTTGCTG 57.538 34.783 0.00 0.00 0.00 4.41
181 182 3.868077 TGTTTGGTTTCGATTTTTGCTGG 59.132 39.130 0.00 0.00 0.00 4.85
182 183 4.116238 GTTTGGTTTCGATTTTTGCTGGA 58.884 39.130 0.00 0.00 0.00 3.86
183 184 4.392921 TTGGTTTCGATTTTTGCTGGAA 57.607 36.364 0.00 0.00 0.00 3.53
184 185 3.712187 TGGTTTCGATTTTTGCTGGAAC 58.288 40.909 0.00 0.00 0.00 3.62
185 186 3.057019 GGTTTCGATTTTTGCTGGAACC 58.943 45.455 0.00 0.00 0.00 3.62
186 187 3.491792 GGTTTCGATTTTTGCTGGAACCA 60.492 43.478 3.98 0.00 0.00 3.67
187 188 3.363341 TTCGATTTTTGCTGGAACCAC 57.637 42.857 0.00 0.00 0.00 4.16
188 189 1.611491 TCGATTTTTGCTGGAACCACC 59.389 47.619 0.00 0.00 39.54 4.61
200 201 3.571590 TGGAACCACCATTAAGTTTGCT 58.428 40.909 0.00 0.00 44.64 3.91
201 202 3.320541 TGGAACCACCATTAAGTTTGCTG 59.679 43.478 0.00 0.00 44.64 4.41
202 203 3.306019 GGAACCACCATTAAGTTTGCTGG 60.306 47.826 0.00 0.00 38.79 4.85
203 204 3.237268 ACCACCATTAAGTTTGCTGGA 57.763 42.857 0.00 0.00 32.92 3.86
204 205 3.571590 ACCACCATTAAGTTTGCTGGAA 58.428 40.909 0.00 0.00 32.92 3.53
205 206 3.320826 ACCACCATTAAGTTTGCTGGAAC 59.679 43.478 0.00 0.00 32.92 3.62
206 207 3.306019 CCACCATTAAGTTTGCTGGAACC 60.306 47.826 0.00 0.00 32.92 3.62
207 208 2.556622 ACCATTAAGTTTGCTGGAACCG 59.443 45.455 0.00 0.00 32.92 4.44
208 209 2.094752 CCATTAAGTTTGCTGGAACCGG 60.095 50.000 0.00 0.00 0.00 5.28
215 216 3.365535 GCTGGAACCGGCAAATGT 58.634 55.556 18.38 0.00 46.81 2.71
216 217 1.665442 GCTGGAACCGGCAAATGTT 59.335 52.632 18.38 0.00 46.81 2.71
217 218 0.033366 GCTGGAACCGGCAAATGTTT 59.967 50.000 18.38 0.00 46.81 2.83
218 219 1.540146 GCTGGAACCGGCAAATGTTTT 60.540 47.619 18.38 0.00 46.81 2.43
219 220 2.832563 CTGGAACCGGCAAATGTTTTT 58.167 42.857 0.00 0.00 0.00 1.94
220 221 2.543430 CTGGAACCGGCAAATGTTTTTG 59.457 45.455 0.00 0.00 44.18 2.44
232 233 6.180771 CAAATGTTTTTGCTTCAACCAAGT 57.819 33.333 0.00 0.00 36.13 3.16
233 234 7.301068 CAAATGTTTTTGCTTCAACCAAGTA 57.699 32.000 0.00 0.00 36.13 2.24
234 235 7.746929 CAAATGTTTTTGCTTCAACCAAGTAA 58.253 30.769 0.00 0.00 36.13 2.24
235 236 8.397148 CAAATGTTTTTGCTTCAACCAAGTAAT 58.603 29.630 0.00 0.00 36.67 1.89
236 237 9.606631 AAATGTTTTTGCTTCAACCAAGTAATA 57.393 25.926 0.00 0.00 36.67 0.98
237 238 9.777297 AATGTTTTTGCTTCAACCAAGTAATAT 57.223 25.926 0.00 0.00 36.67 1.28
238 239 9.777297 ATGTTTTTGCTTCAACCAAGTAATATT 57.223 25.926 0.00 0.00 36.67 1.28
239 240 9.606631 TGTTTTTGCTTCAACCAAGTAATATTT 57.393 25.926 0.00 0.00 36.67 1.40
279 280 3.540314 TTTTTCATGGCAGTGCAAGTT 57.460 38.095 18.61 0.00 0.00 2.66
280 281 2.512485 TTTCATGGCAGTGCAAGTTG 57.488 45.000 18.61 8.34 0.00 3.16
281 282 0.675083 TTCATGGCAGTGCAAGTTGG 59.325 50.000 18.61 0.00 0.00 3.77
282 283 1.180456 TCATGGCAGTGCAAGTTGGG 61.180 55.000 18.61 0.00 0.00 4.12
283 284 2.576832 ATGGCAGTGCAAGTTGGGC 61.577 57.895 18.61 0.73 0.00 5.36
284 285 3.225798 GGCAGTGCAAGTTGGGCA 61.226 61.111 18.61 0.00 39.32 5.36
285 286 2.576832 GGCAGTGCAAGTTGGGCAT 61.577 57.895 18.61 0.00 44.11 4.40
286 287 1.080298 GCAGTGCAAGTTGGGCATC 60.080 57.895 11.09 0.00 44.11 3.91
287 288 1.210931 CAGTGCAAGTTGGGCATCG 59.789 57.895 4.75 0.00 44.11 3.84
288 289 1.973281 AGTGCAAGTTGGGCATCGG 60.973 57.895 4.75 0.00 44.11 4.18
289 290 2.676121 TGCAAGTTGGGCATCGGG 60.676 61.111 4.75 0.00 36.11 5.14
290 291 3.451894 GCAAGTTGGGCATCGGGG 61.452 66.667 4.75 0.00 0.00 5.73
291 292 2.354729 CAAGTTGGGCATCGGGGA 59.645 61.111 0.00 0.00 0.00 4.81
292 293 1.076777 CAAGTTGGGCATCGGGGAT 60.077 57.895 0.00 0.00 0.00 3.85
293 294 1.076777 AAGTTGGGCATCGGGGATG 60.077 57.895 1.29 1.29 42.37 3.51
294 295 1.863155 AAGTTGGGCATCGGGGATGT 61.863 55.000 7.38 0.00 41.60 3.06
295 296 1.379843 GTTGGGCATCGGGGATGTT 60.380 57.895 7.38 0.00 41.60 2.71
296 297 0.106918 GTTGGGCATCGGGGATGTTA 60.107 55.000 7.38 0.00 41.60 2.41
297 298 0.106918 TTGGGCATCGGGGATGTTAC 60.107 55.000 7.38 0.02 41.60 2.50
298 299 1.275421 TGGGCATCGGGGATGTTACA 61.275 55.000 7.38 0.00 41.60 2.41
299 300 0.106918 GGGCATCGGGGATGTTACAA 60.107 55.000 7.38 0.00 41.60 2.41
300 301 1.021968 GGCATCGGGGATGTTACAAC 58.978 55.000 7.38 0.00 41.60 3.32
301 302 1.021968 GCATCGGGGATGTTACAACC 58.978 55.000 2.83 2.83 41.60 3.77
302 303 1.680555 GCATCGGGGATGTTACAACCA 60.681 52.381 13.53 0.00 41.60 3.67
303 304 2.930950 CATCGGGGATGTTACAACCAT 58.069 47.619 13.53 0.00 35.54 3.55
304 305 2.411628 TCGGGGATGTTACAACCATG 57.588 50.000 13.53 5.19 0.00 3.66
305 306 1.631388 TCGGGGATGTTACAACCATGT 59.369 47.619 13.53 0.00 43.74 3.21
306 307 2.014128 CGGGGATGTTACAACCATGTC 58.986 52.381 13.53 0.00 41.05 3.06
307 308 2.014128 GGGGATGTTACAACCATGTCG 58.986 52.381 13.53 0.00 41.05 4.35
308 309 2.355310 GGGGATGTTACAACCATGTCGA 60.355 50.000 13.53 0.00 41.05 4.20
309 310 2.676342 GGGATGTTACAACCATGTCGAC 59.324 50.000 13.53 9.11 41.05 4.20
310 311 2.676342 GGATGTTACAACCATGTCGACC 59.324 50.000 14.12 0.00 41.05 4.79
311 312 1.785768 TGTTACAACCATGTCGACCG 58.214 50.000 14.12 3.93 41.05 4.79
312 313 1.068895 TGTTACAACCATGTCGACCGT 59.931 47.619 14.12 3.53 41.05 4.83
313 314 1.458064 GTTACAACCATGTCGACCGTG 59.542 52.381 14.12 11.82 41.05 4.94
314 315 0.668096 TACAACCATGTCGACCGTGC 60.668 55.000 14.12 0.00 41.05 5.34
315 316 1.667830 CAACCATGTCGACCGTGCT 60.668 57.895 14.12 0.00 0.00 4.40
316 317 1.667830 AACCATGTCGACCGTGCTG 60.668 57.895 14.12 2.89 0.00 4.41
317 318 2.048222 CCATGTCGACCGTGCTGT 60.048 61.111 14.12 0.00 0.00 4.40
318 319 2.382746 CCATGTCGACCGTGCTGTG 61.383 63.158 14.12 0.78 0.00 3.66
319 320 2.048222 ATGTCGACCGTGCTGTGG 60.048 61.111 14.12 0.00 0.00 4.17
320 321 2.570284 ATGTCGACCGTGCTGTGGA 61.570 57.895 14.12 0.00 0.00 4.02
321 322 2.028484 GTCGACCGTGCTGTGGAA 59.972 61.111 3.51 0.00 0.00 3.53
322 323 2.028484 TCGACCGTGCTGTGGAAC 59.972 61.111 0.00 0.00 37.35 3.62
323 324 3.041940 CGACCGTGCTGTGGAACC 61.042 66.667 0.00 0.00 34.36 3.62
324 325 2.668550 GACCGTGCTGTGGAACCC 60.669 66.667 0.00 0.00 34.36 4.11
325 326 4.619227 ACCGTGCTGTGGAACCCG 62.619 66.667 0.00 0.00 34.36 5.28
328 329 4.643387 GTGCTGTGGAACCCGCCT 62.643 66.667 0.00 0.00 34.36 5.52
329 330 2.925706 TGCTGTGGAACCCGCCTA 60.926 61.111 0.00 0.00 34.36 3.93
330 331 2.297895 TGCTGTGGAACCCGCCTAT 61.298 57.895 0.00 0.00 34.36 2.57
331 332 1.819632 GCTGTGGAACCCGCCTATG 60.820 63.158 0.00 0.00 34.36 2.23
332 333 1.602237 CTGTGGAACCCGCCTATGT 59.398 57.895 0.00 0.00 34.36 2.29
333 334 0.035439 CTGTGGAACCCGCCTATGTT 60.035 55.000 0.00 0.00 34.36 2.71
334 335 0.035820 TGTGGAACCCGCCTATGTTC 60.036 55.000 0.00 0.00 40.06 3.18
335 336 1.087771 GTGGAACCCGCCTATGTTCG 61.088 60.000 0.00 0.00 41.36 3.95
336 337 1.259142 TGGAACCCGCCTATGTTCGA 61.259 55.000 0.00 0.00 41.36 3.71
337 338 0.529992 GGAACCCGCCTATGTTCGAG 60.530 60.000 0.00 0.00 41.36 4.04
338 339 1.152383 GAACCCGCCTATGTTCGAGC 61.152 60.000 0.00 0.00 32.40 5.03
339 340 1.614241 AACCCGCCTATGTTCGAGCT 61.614 55.000 0.00 0.00 0.00 4.09
340 341 1.592669 CCCGCCTATGTTCGAGCTG 60.593 63.158 0.00 0.00 0.00 4.24
341 342 2.240500 CCGCCTATGTTCGAGCTGC 61.241 63.158 0.00 0.00 0.00 5.25
342 343 1.519234 CGCCTATGTTCGAGCTGCA 60.519 57.895 1.02 0.00 0.00 4.41
343 344 1.083806 CGCCTATGTTCGAGCTGCAA 61.084 55.000 1.02 0.00 0.00 4.08
344 345 0.375106 GCCTATGTTCGAGCTGCAAC 59.625 55.000 1.02 0.00 0.00 4.17
345 346 1.009829 CCTATGTTCGAGCTGCAACC 58.990 55.000 1.02 0.00 0.00 3.77
346 347 1.675714 CCTATGTTCGAGCTGCAACCA 60.676 52.381 1.02 0.00 0.00 3.67
347 348 2.283298 CTATGTTCGAGCTGCAACCAT 58.717 47.619 1.02 0.00 0.00 3.55
348 349 0.806868 ATGTTCGAGCTGCAACCATG 59.193 50.000 1.02 0.00 0.00 3.66
358 359 3.197790 CAACCATGCCGAGCGGAG 61.198 66.667 13.94 1.37 37.50 4.63
359 360 4.473520 AACCATGCCGAGCGGAGG 62.474 66.667 13.94 12.77 37.50 4.30
407 408 2.742372 GAGCACGGTGGCACGAAT 60.742 61.111 12.17 0.00 37.61 3.34
408 409 3.027170 GAGCACGGTGGCACGAATG 62.027 63.158 12.17 10.50 37.61 2.67
409 410 3.047280 GCACGGTGGCACGAATGA 61.047 61.111 12.17 0.00 37.61 2.57
410 411 2.860293 CACGGTGGCACGAATGAC 59.140 61.111 12.17 0.00 37.61 3.06
411 412 2.358247 ACGGTGGCACGAATGACC 60.358 61.111 12.17 0.00 37.61 4.02
412 413 3.487202 CGGTGGCACGAATGACCG 61.487 66.667 12.17 3.59 44.86 4.79
413 414 3.124921 GGTGGCACGAATGACCGG 61.125 66.667 12.17 0.00 29.67 5.28
414 415 3.799755 GTGGCACGAATGACCGGC 61.800 66.667 0.00 0.00 29.67 6.13
415 416 4.321966 TGGCACGAATGACCGGCA 62.322 61.111 0.00 0.00 29.67 5.69
416 417 3.053291 GGCACGAATGACCGGCAA 61.053 61.111 0.00 0.00 0.00 4.52
417 418 2.480555 GCACGAATGACCGGCAAG 59.519 61.111 0.00 0.00 0.00 4.01
418 419 2.480555 CACGAATGACCGGCAAGC 59.519 61.111 0.00 0.00 0.00 4.01
419 420 2.031919 ACGAATGACCGGCAAGCA 59.968 55.556 0.00 0.00 0.00 3.91
420 421 2.034879 ACGAATGACCGGCAAGCAG 61.035 57.895 0.00 0.00 0.00 4.24
421 422 2.753966 CGAATGACCGGCAAGCAGG 61.754 63.158 9.72 9.72 37.31 4.85
422 423 1.377202 GAATGACCGGCAAGCAGGA 60.377 57.895 17.99 0.00 35.27 3.86
423 424 1.372087 GAATGACCGGCAAGCAGGAG 61.372 60.000 17.99 0.00 35.27 3.69
424 425 1.841302 AATGACCGGCAAGCAGGAGA 61.841 55.000 17.99 4.06 35.27 3.71
425 426 1.841302 ATGACCGGCAAGCAGGAGAA 61.841 55.000 17.99 3.36 35.27 2.87
426 427 1.743252 GACCGGCAAGCAGGAGAAG 60.743 63.158 17.99 0.00 35.27 2.85
427 428 3.130160 CCGGCAAGCAGGAGAAGC 61.130 66.667 5.22 0.00 32.98 3.86
428 429 3.130160 CGGCAAGCAGGAGAAGCC 61.130 66.667 0.00 0.00 41.86 4.35
429 430 3.130160 GGCAAGCAGGAGAAGCCG 61.130 66.667 0.00 0.00 43.43 5.52
430 431 2.046892 GCAAGCAGGAGAAGCCGA 60.047 61.111 0.00 0.00 43.43 5.54
431 432 2.105466 GCAAGCAGGAGAAGCCGAG 61.105 63.158 0.00 0.00 43.43 4.63
432 433 1.449246 CAAGCAGGAGAAGCCGAGG 60.449 63.158 0.00 0.00 43.43 4.63
433 434 1.610673 AAGCAGGAGAAGCCGAGGA 60.611 57.895 0.00 0.00 43.43 3.71
434 435 1.893919 AAGCAGGAGAAGCCGAGGAC 61.894 60.000 0.00 0.00 43.43 3.85
435 436 2.650116 GCAGGAGAAGCCGAGGACA 61.650 63.158 0.00 0.00 43.43 4.02
436 437 1.975327 CAGGAGAAGCCGAGGACAA 59.025 57.895 0.00 0.00 43.43 3.18
437 438 0.108424 CAGGAGAAGCCGAGGACAAG 60.108 60.000 0.00 0.00 43.43 3.16
438 439 0.543174 AGGAGAAGCCGAGGACAAGT 60.543 55.000 0.00 0.00 43.43 3.16
439 440 0.390472 GGAGAAGCCGAGGACAAGTG 60.390 60.000 0.00 0.00 0.00 3.16
440 441 1.004440 AGAAGCCGAGGACAAGTGC 60.004 57.895 0.00 0.00 0.00 4.40
441 442 2.357517 AAGCCGAGGACAAGTGCG 60.358 61.111 0.00 0.00 0.00 5.34
442 443 3.883744 AAGCCGAGGACAAGTGCGG 62.884 63.158 0.00 0.00 46.14 5.69
464 465 4.662961 CTGGTGAGCGCGTGTGGA 62.663 66.667 8.43 0.00 0.00 4.02
465 466 4.662961 TGGTGAGCGCGTGTGGAG 62.663 66.667 8.43 0.00 0.00 3.86
466 467 4.664677 GGTGAGCGCGTGTGGAGT 62.665 66.667 8.43 0.00 0.00 3.85
467 468 3.106407 GTGAGCGCGTGTGGAGTC 61.106 66.667 8.43 0.00 0.00 3.36
468 469 4.357947 TGAGCGCGTGTGGAGTCC 62.358 66.667 8.43 0.73 0.00 3.85
492 493 3.139029 GCAAGCACGCCTAACTAGT 57.861 52.632 0.00 0.00 0.00 2.57
493 494 1.439679 GCAAGCACGCCTAACTAGTT 58.560 50.000 13.68 13.68 0.00 2.24
494 495 1.804748 GCAAGCACGCCTAACTAGTTT 59.195 47.619 14.49 0.00 0.00 2.66
495 496 2.412847 GCAAGCACGCCTAACTAGTTTG 60.413 50.000 14.49 11.84 0.00 2.93
496 497 2.094762 AGCACGCCTAACTAGTTTGG 57.905 50.000 26.11 26.11 38.27 3.28
497 498 1.346722 AGCACGCCTAACTAGTTTGGT 59.653 47.619 29.01 17.40 37.69 3.67
498 499 2.564062 AGCACGCCTAACTAGTTTGGTA 59.436 45.455 29.01 6.78 37.69 3.25
499 500 2.928116 GCACGCCTAACTAGTTTGGTAG 59.072 50.000 29.01 25.07 37.69 3.18
500 501 3.367703 GCACGCCTAACTAGTTTGGTAGA 60.368 47.826 29.01 5.77 37.69 2.59
501 502 4.813027 CACGCCTAACTAGTTTGGTAGAA 58.187 43.478 29.01 5.10 37.69 2.10
502 503 4.624452 CACGCCTAACTAGTTTGGTAGAAC 59.376 45.833 29.01 15.77 37.69 3.01
503 504 4.179298 CGCCTAACTAGTTTGGTAGAACC 58.821 47.826 29.01 15.20 37.69 3.62
504 505 4.081807 CGCCTAACTAGTTTGGTAGAACCT 60.082 45.833 29.01 0.00 39.58 3.50
505 506 5.568223 CGCCTAACTAGTTTGGTAGAACCTT 60.568 44.000 29.01 0.00 39.58 3.50
506 507 6.236409 GCCTAACTAGTTTGGTAGAACCTTT 58.764 40.000 29.01 0.00 39.58 3.11
507 508 6.713903 GCCTAACTAGTTTGGTAGAACCTTTT 59.286 38.462 29.01 0.00 39.58 2.27
508 509 7.230108 GCCTAACTAGTTTGGTAGAACCTTTTT 59.770 37.037 29.01 0.00 39.58 1.94
509 510 8.781196 CCTAACTAGTTTGGTAGAACCTTTTTC 58.219 37.037 23.26 0.00 39.58 2.29
510 511 7.578310 AACTAGTTTGGTAGAACCTTTTTCC 57.422 36.000 1.12 0.00 39.58 3.13
511 512 6.907961 ACTAGTTTGGTAGAACCTTTTTCCT 58.092 36.000 0.00 0.00 39.58 3.36
512 513 6.771267 ACTAGTTTGGTAGAACCTTTTTCCTG 59.229 38.462 0.00 0.00 39.58 3.86
513 514 4.341235 AGTTTGGTAGAACCTTTTTCCTGC 59.659 41.667 0.00 0.00 39.58 4.85
514 515 3.586470 TGGTAGAACCTTTTTCCTGCA 57.414 42.857 0.00 0.00 39.58 4.41
515 516 4.112634 TGGTAGAACCTTTTTCCTGCAT 57.887 40.909 0.00 0.00 39.58 3.96
516 517 3.826157 TGGTAGAACCTTTTTCCTGCATG 59.174 43.478 0.00 0.00 39.58 4.06
517 518 3.826729 GGTAGAACCTTTTTCCTGCATGT 59.173 43.478 0.00 0.00 34.73 3.21
518 519 4.280929 GGTAGAACCTTTTTCCTGCATGTT 59.719 41.667 0.00 0.00 34.73 2.71
519 520 5.221441 GGTAGAACCTTTTTCCTGCATGTTT 60.221 40.000 0.00 0.00 34.73 2.83
520 521 4.696455 AGAACCTTTTTCCTGCATGTTTG 58.304 39.130 0.00 0.00 0.00 2.93
521 522 4.405358 AGAACCTTTTTCCTGCATGTTTGA 59.595 37.500 0.00 0.00 0.00 2.69
522 523 4.058721 ACCTTTTTCCTGCATGTTTGAC 57.941 40.909 0.00 0.00 0.00 3.18
523 524 3.706086 ACCTTTTTCCTGCATGTTTGACT 59.294 39.130 0.00 0.00 0.00 3.41
524 525 4.162131 ACCTTTTTCCTGCATGTTTGACTT 59.838 37.500 0.00 0.00 0.00 3.01
525 526 5.118286 CCTTTTTCCTGCATGTTTGACTTT 58.882 37.500 0.00 0.00 0.00 2.66
526 527 5.585844 CCTTTTTCCTGCATGTTTGACTTTT 59.414 36.000 0.00 0.00 0.00 2.27
527 528 6.419980 TTTTTCCTGCATGTTTGACTTTTG 57.580 33.333 0.00 0.00 0.00 2.44
528 529 3.731652 TCCTGCATGTTTGACTTTTGG 57.268 42.857 0.00 0.00 0.00 3.28
529 530 2.364970 TCCTGCATGTTTGACTTTTGGG 59.635 45.455 0.00 0.00 0.00 4.12
530 531 2.548493 CCTGCATGTTTGACTTTTGGGG 60.548 50.000 0.00 0.00 0.00 4.96
531 532 2.364970 CTGCATGTTTGACTTTTGGGGA 59.635 45.455 0.00 0.00 0.00 4.81
532 533 2.102252 TGCATGTTTGACTTTTGGGGAC 59.898 45.455 0.00 0.00 0.00 4.46
533 534 2.862140 GCATGTTTGACTTTTGGGGACG 60.862 50.000 0.00 0.00 0.00 4.79
534 535 2.421751 TGTTTGACTTTTGGGGACGA 57.578 45.000 0.00 0.00 0.00 4.20
535 536 2.724454 TGTTTGACTTTTGGGGACGAA 58.276 42.857 0.00 0.00 0.00 3.85
536 537 2.685897 TGTTTGACTTTTGGGGACGAAG 59.314 45.455 0.00 0.00 34.49 3.79
537 538 2.946990 GTTTGACTTTTGGGGACGAAGA 59.053 45.455 0.00 0.00 34.49 2.87
538 539 3.284793 TTGACTTTTGGGGACGAAGAA 57.715 42.857 0.00 0.00 34.49 2.52
539 540 3.284793 TGACTTTTGGGGACGAAGAAA 57.715 42.857 0.00 0.00 34.49 2.52
540 541 3.622630 TGACTTTTGGGGACGAAGAAAA 58.377 40.909 0.00 0.00 34.49 2.29
541 542 4.017808 TGACTTTTGGGGACGAAGAAAAA 58.982 39.130 0.00 0.00 34.49 1.94
573 574 7.280730 TGTACGGTTAAAAATGACTGTATCG 57.719 36.000 0.00 0.00 39.18 2.92
574 575 6.867816 TGTACGGTTAAAAATGACTGTATCGT 59.132 34.615 0.00 0.00 39.18 3.73
575 576 8.026026 TGTACGGTTAAAAATGACTGTATCGTA 58.974 33.333 0.00 0.00 39.18 3.43
576 577 7.281991 ACGGTTAAAAATGACTGTATCGTAC 57.718 36.000 0.00 0.00 33.78 3.67
577 578 6.033831 ACGGTTAAAAATGACTGTATCGTACG 59.966 38.462 9.53 9.53 33.78 3.67
578 579 6.251163 CGGTTAAAAATGACTGTATCGTACGA 59.749 38.462 21.93 21.93 0.00 3.43
579 580 7.043854 CGGTTAAAAATGACTGTATCGTACGAT 60.044 37.037 31.40 31.40 38.54 3.73
580 581 8.264632 GGTTAAAAATGACTGTATCGTACGATC 58.735 37.037 32.51 22.89 36.17 3.69
581 582 6.492286 AAAAATGACTGTATCGTACGATCG 57.508 37.500 32.51 22.90 36.17 3.69
582 583 5.413969 AAATGACTGTATCGTACGATCGA 57.586 39.130 32.51 19.20 43.86 3.59
583 584 3.848846 TGACTGTATCGTACGATCGAC 57.151 47.619 32.51 25.27 42.56 4.20
584 585 3.189285 TGACTGTATCGTACGATCGACA 58.811 45.455 32.51 28.01 42.56 4.35
585 586 3.618150 TGACTGTATCGTACGATCGACAA 59.382 43.478 32.51 15.22 42.56 3.18
586 587 3.933031 ACTGTATCGTACGATCGACAAC 58.067 45.455 32.51 23.92 42.56 3.32
587 588 3.242543 ACTGTATCGTACGATCGACAACC 60.243 47.826 32.51 13.66 42.56 3.77
588 589 2.285776 TGTATCGTACGATCGACAACCG 60.286 50.000 32.51 14.92 42.56 4.44
604 605 2.935505 CCGACCGGTCCAAATTTGA 58.064 52.632 28.52 3.14 0.00 2.69
605 606 0.802494 CCGACCGGTCCAAATTTGAG 59.198 55.000 28.52 10.96 0.00 3.02
606 607 0.168128 CGACCGGTCCAAATTTGAGC 59.832 55.000 28.52 13.21 0.00 4.26
607 608 0.526211 GACCGGTCCAAATTTGAGCC 59.474 55.000 24.75 17.69 0.00 4.70
608 609 1.241315 ACCGGTCCAAATTTGAGCCG 61.241 55.000 29.66 29.66 41.43 5.52
609 610 1.506262 CGGTCCAAATTTGAGCCGG 59.494 57.895 29.28 18.43 39.64 6.13
610 611 1.215382 GGTCCAAATTTGAGCCGGC 59.785 57.895 21.89 21.89 0.00 6.13
611 612 1.154035 GTCCAAATTTGAGCCGGCG 60.154 57.895 23.20 0.00 0.00 6.46
612 613 2.506881 CCAAATTTGAGCCGGCGC 60.507 61.111 24.58 24.58 0.00 6.53
613 614 2.257980 CAAATTTGAGCCGGCGCA 59.742 55.556 30.00 30.00 37.52 6.09
614 615 2.088178 CAAATTTGAGCCGGCGCAC 61.088 57.895 33.39 21.83 37.52 5.34
615 616 3.281359 AAATTTGAGCCGGCGCACC 62.281 57.895 33.39 17.49 37.52 5.01
632 633 4.728102 CGGCACCGCGTTGTCCTA 62.728 66.667 1.64 0.00 0.00 2.94
633 634 2.125269 GGCACCGCGTTGTCCTAT 60.125 61.111 5.30 0.00 0.00 2.57
634 635 2.461110 GGCACCGCGTTGTCCTATG 61.461 63.158 5.30 0.00 0.00 2.23
635 636 1.447140 GCACCGCGTTGTCCTATGA 60.447 57.895 5.30 0.00 0.00 2.15
636 637 1.017177 GCACCGCGTTGTCCTATGAA 61.017 55.000 5.30 0.00 0.00 2.57
637 638 1.434555 CACCGCGTTGTCCTATGAAA 58.565 50.000 4.92 0.00 0.00 2.69
638 639 1.801771 CACCGCGTTGTCCTATGAAAA 59.198 47.619 4.92 0.00 0.00 2.29
639 640 2.418628 CACCGCGTTGTCCTATGAAAAT 59.581 45.455 4.92 0.00 0.00 1.82
640 641 3.619483 CACCGCGTTGTCCTATGAAAATA 59.381 43.478 4.92 0.00 0.00 1.40
641 642 4.272504 CACCGCGTTGTCCTATGAAAATAT 59.727 41.667 4.92 0.00 0.00 1.28
642 643 4.272504 ACCGCGTTGTCCTATGAAAATATG 59.727 41.667 4.92 0.00 0.00 1.78
643 644 4.319477 CCGCGTTGTCCTATGAAAATATGG 60.319 45.833 4.92 0.00 0.00 2.74
644 645 4.272504 CGCGTTGTCCTATGAAAATATGGT 59.727 41.667 0.00 0.00 0.00 3.55
645 646 5.464057 CGCGTTGTCCTATGAAAATATGGTA 59.536 40.000 0.00 0.00 0.00 3.25
646 647 6.563381 CGCGTTGTCCTATGAAAATATGGTAC 60.563 42.308 0.00 0.00 0.00 3.34
647 648 6.563381 GCGTTGTCCTATGAAAATATGGTACG 60.563 42.308 0.00 0.00 0.00 3.67
648 649 6.477688 CGTTGTCCTATGAAAATATGGTACGT 59.522 38.462 0.00 0.00 0.00 3.57
652 653 9.233649 TGTCCTATGAAAATATGGTACGTTTTT 57.766 29.630 0.00 0.00 0.00 1.94
665 666 3.366440 ACGTTTTTGCGTACTCTCTCT 57.634 42.857 0.00 0.00 43.83 3.10
666 667 3.714391 ACGTTTTTGCGTACTCTCTCTT 58.286 40.909 0.00 0.00 43.83 2.85
667 668 4.117685 ACGTTTTTGCGTACTCTCTCTTT 58.882 39.130 0.00 0.00 43.83 2.52
822 827 1.199327 ACGATCACACGTACACTCCTG 59.801 52.381 0.00 0.00 44.72 3.86
941 953 2.999355 CAGTTTCTTCACCAGCTAGCTC 59.001 50.000 16.15 0.00 0.00 4.09
943 955 1.257743 TTCTTCACCAGCTAGCTCGT 58.742 50.000 16.15 12.56 0.00 4.18
1029 1041 3.818982 GAGCACCGTGTCGTCGTGT 62.819 63.158 0.00 0.00 0.00 4.49
1108 1120 1.522092 GCCACCATCCTCGTCATCA 59.478 57.895 0.00 0.00 0.00 3.07
1209 1221 1.913762 CTTCACCCTCACCCCGAGT 60.914 63.158 0.00 0.00 40.48 4.18
1260 1272 4.796231 CTCTCCGTCCGCAACCCG 62.796 72.222 0.00 0.00 0.00 5.28
1383 1395 3.681835 GAGACCACCGTCGTGCCT 61.682 66.667 0.00 0.00 44.28 4.75
1506 1518 0.737219 GCGCCAAGATGAAGCTCAAT 59.263 50.000 0.00 0.00 0.00 2.57
1890 1907 0.683504 GTCGTCTTCCTCCCTGCCTA 60.684 60.000 0.00 0.00 0.00 3.93
2398 2439 5.034554 TCTGTTGAAGCAAAAGATTAGCG 57.965 39.130 0.00 0.00 33.33 4.26
2576 2619 1.406539 GCAAAATCCTCGATGTGCCAT 59.593 47.619 0.00 0.00 31.69 4.40
2644 2687 3.531538 GCCGATTCCAACATCTTCACTA 58.468 45.455 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.506886 AAGTCTCCAGTACTCGTTGAAG 57.493 45.455 0.00 0.00 0.00 3.02
2 3 4.098960 ACAAAAGTCTCCAGTACTCGTTGA 59.901 41.667 0.00 0.00 31.36 3.18
4 5 4.341520 AGACAAAAGTCTCCAGTACTCGTT 59.658 41.667 0.00 0.00 0.00 3.85
5 6 3.890147 AGACAAAAGTCTCCAGTACTCGT 59.110 43.478 0.00 0.00 0.00 4.18
7 8 4.561105 CCAGACAAAAGTCTCCAGTACTC 58.439 47.826 0.00 0.00 0.00 2.59
8 9 3.244249 GCCAGACAAAAGTCTCCAGTACT 60.244 47.826 0.00 0.00 0.00 2.73
9 10 3.067833 GCCAGACAAAAGTCTCCAGTAC 58.932 50.000 0.00 0.00 0.00 2.73
10 11 2.288825 CGCCAGACAAAAGTCTCCAGTA 60.289 50.000 0.00 0.00 0.00 2.74
11 12 1.541233 CGCCAGACAAAAGTCTCCAGT 60.541 52.381 0.00 0.00 0.00 4.00
12 13 1.151668 CGCCAGACAAAAGTCTCCAG 58.848 55.000 0.00 0.00 0.00 3.86
13 14 0.468226 ACGCCAGACAAAAGTCTCCA 59.532 50.000 0.00 0.00 0.00 3.86
14 15 1.149148 GACGCCAGACAAAAGTCTCC 58.851 55.000 0.00 0.00 0.00 3.71
15 16 0.784778 CGACGCCAGACAAAAGTCTC 59.215 55.000 0.00 0.00 0.00 3.36
16 17 0.387929 TCGACGCCAGACAAAAGTCT 59.612 50.000 0.00 0.00 0.00 3.24
17 18 0.507358 GTCGACGCCAGACAAAAGTC 59.493 55.000 0.00 0.00 38.42 3.01
18 19 0.104304 AGTCGACGCCAGACAAAAGT 59.896 50.000 10.46 0.00 40.84 2.66
19 20 1.217882 AAGTCGACGCCAGACAAAAG 58.782 50.000 10.46 0.00 40.84 2.27
20 21 1.658994 AAAGTCGACGCCAGACAAAA 58.341 45.000 10.46 0.00 40.84 2.44
21 22 1.595794 GAAAAGTCGACGCCAGACAAA 59.404 47.619 10.46 0.00 40.84 2.83
22 23 1.202486 AGAAAAGTCGACGCCAGACAA 60.202 47.619 10.46 0.00 40.84 3.18
23 24 0.387929 AGAAAAGTCGACGCCAGACA 59.612 50.000 10.46 0.00 40.84 3.41
24 25 0.784778 CAGAAAAGTCGACGCCAGAC 59.215 55.000 10.46 1.43 38.81 3.51
25 26 0.319555 CCAGAAAAGTCGACGCCAGA 60.320 55.000 10.46 0.00 0.00 3.86
26 27 0.319555 TCCAGAAAAGTCGACGCCAG 60.320 55.000 10.46 0.00 0.00 4.85
27 28 0.105224 TTCCAGAAAAGTCGACGCCA 59.895 50.000 10.46 0.00 0.00 5.69
28 29 0.511653 GTTCCAGAAAAGTCGACGCC 59.488 55.000 10.46 0.72 0.00 5.68
29 30 1.192534 CAGTTCCAGAAAAGTCGACGC 59.807 52.381 10.46 1.26 0.00 5.19
30 31 1.792949 CCAGTTCCAGAAAAGTCGACG 59.207 52.381 10.46 0.00 0.00 5.12
31 32 1.531578 GCCAGTTCCAGAAAAGTCGAC 59.468 52.381 7.70 7.70 0.00 4.20
32 33 1.416401 AGCCAGTTCCAGAAAAGTCGA 59.584 47.619 0.00 0.00 0.00 4.20
33 34 1.532868 CAGCCAGTTCCAGAAAAGTCG 59.467 52.381 0.00 0.00 0.00 4.18
34 35 2.851195 TCAGCCAGTTCCAGAAAAGTC 58.149 47.619 0.00 0.00 0.00 3.01
35 36 3.515602 ATCAGCCAGTTCCAGAAAAGT 57.484 42.857 0.00 0.00 0.00 2.66
36 37 3.120060 CGAATCAGCCAGTTCCAGAAAAG 60.120 47.826 0.00 0.00 0.00 2.27
37 38 2.813754 CGAATCAGCCAGTTCCAGAAAA 59.186 45.455 0.00 0.00 0.00 2.29
38 39 2.224523 ACGAATCAGCCAGTTCCAGAAA 60.225 45.455 0.00 0.00 0.00 2.52
39 40 1.347707 ACGAATCAGCCAGTTCCAGAA 59.652 47.619 0.00 0.00 0.00 3.02
40 41 0.976641 ACGAATCAGCCAGTTCCAGA 59.023 50.000 0.00 0.00 0.00 3.86
41 42 1.813513 AACGAATCAGCCAGTTCCAG 58.186 50.000 0.00 0.00 0.00 3.86
42 43 1.879380 CAAACGAATCAGCCAGTTCCA 59.121 47.619 0.00 0.00 0.00 3.53
43 44 1.401539 GCAAACGAATCAGCCAGTTCC 60.402 52.381 0.00 0.00 0.00 3.62
44 45 1.537202 AGCAAACGAATCAGCCAGTTC 59.463 47.619 0.00 0.00 0.00 3.01
45 46 1.609208 AGCAAACGAATCAGCCAGTT 58.391 45.000 0.00 0.00 0.00 3.16
46 47 2.076863 GTAGCAAACGAATCAGCCAGT 58.923 47.619 0.00 0.00 0.00 4.00
47 48 2.076100 TGTAGCAAACGAATCAGCCAG 58.924 47.619 0.00 0.00 0.00 4.85
48 49 2.177394 TGTAGCAAACGAATCAGCCA 57.823 45.000 0.00 0.00 0.00 4.75
49 50 3.487544 GGATTGTAGCAAACGAATCAGCC 60.488 47.826 0.00 0.00 32.11 4.85
50 51 3.126858 TGGATTGTAGCAAACGAATCAGC 59.873 43.478 0.00 0.00 32.11 4.26
51 52 4.393062 AGTGGATTGTAGCAAACGAATCAG 59.607 41.667 0.00 0.00 32.11 2.90
52 53 4.323417 AGTGGATTGTAGCAAACGAATCA 58.677 39.130 0.00 1.69 32.11 2.57
53 54 4.946784 AGTGGATTGTAGCAAACGAATC 57.053 40.909 0.00 0.00 0.00 2.52
54 55 4.634443 GGTAGTGGATTGTAGCAAACGAAT 59.366 41.667 0.00 0.00 0.00 3.34
55 56 3.998341 GGTAGTGGATTGTAGCAAACGAA 59.002 43.478 0.00 0.00 0.00 3.85
56 57 3.592059 GGTAGTGGATTGTAGCAAACGA 58.408 45.455 0.00 0.00 0.00 3.85
57 58 2.347452 CGGTAGTGGATTGTAGCAAACG 59.653 50.000 0.00 0.00 0.00 3.60
58 59 3.592059 TCGGTAGTGGATTGTAGCAAAC 58.408 45.455 0.00 0.00 0.00 2.93
59 60 3.965379 TCGGTAGTGGATTGTAGCAAA 57.035 42.857 0.00 0.00 0.00 3.68
60 61 3.259876 ACTTCGGTAGTGGATTGTAGCAA 59.740 43.478 0.00 0.00 35.19 3.91
61 62 2.829720 ACTTCGGTAGTGGATTGTAGCA 59.170 45.455 0.00 0.00 35.19 3.49
62 63 3.521947 ACTTCGGTAGTGGATTGTAGC 57.478 47.619 0.00 0.00 35.19 3.58
63 64 6.796705 AAAAACTTCGGTAGTGGATTGTAG 57.203 37.500 0.00 0.00 37.12 2.74
86 87 4.920640 TTAATCGTGGTTCCAGCAAAAA 57.079 36.364 0.00 0.00 0.00 1.94
87 88 5.461032 AATTAATCGTGGTTCCAGCAAAA 57.539 34.783 0.00 0.00 0.00 2.44
88 89 5.461032 AAATTAATCGTGGTTCCAGCAAA 57.539 34.783 0.00 0.00 0.00 3.68
89 90 5.461032 AAAATTAATCGTGGTTCCAGCAA 57.539 34.783 0.00 0.00 0.00 3.91
90 91 5.226396 CAAAAATTAATCGTGGTTCCAGCA 58.774 37.500 0.00 0.00 0.00 4.41
91 92 4.091365 GCAAAAATTAATCGTGGTTCCAGC 59.909 41.667 0.00 0.00 0.00 4.85
92 93 5.345741 CAGCAAAAATTAATCGTGGTTCCAG 59.654 40.000 0.00 0.00 0.00 3.86
93 94 5.226396 CAGCAAAAATTAATCGTGGTTCCA 58.774 37.500 0.00 0.00 0.00 3.53
94 95 4.625311 CCAGCAAAAATTAATCGTGGTTCC 59.375 41.667 0.00 0.00 0.00 3.62
95 96 5.465935 TCCAGCAAAAATTAATCGTGGTTC 58.534 37.500 0.00 0.00 0.00 3.62
96 97 5.461032 TCCAGCAAAAATTAATCGTGGTT 57.539 34.783 0.00 0.00 0.00 3.67
97 98 5.227152 GTTCCAGCAAAAATTAATCGTGGT 58.773 37.500 0.00 0.00 0.00 4.16
98 99 4.323336 CGTTCCAGCAAAAATTAATCGTGG 59.677 41.667 0.00 0.00 0.00 4.94
99 100 4.323336 CCGTTCCAGCAAAAATTAATCGTG 59.677 41.667 0.00 0.00 0.00 4.35
100 101 4.216687 TCCGTTCCAGCAAAAATTAATCGT 59.783 37.500 0.00 0.00 0.00 3.73
101 102 4.557301 GTCCGTTCCAGCAAAAATTAATCG 59.443 41.667 0.00 0.00 0.00 3.34
102 103 5.465935 TGTCCGTTCCAGCAAAAATTAATC 58.534 37.500 0.00 0.00 0.00 1.75
103 104 5.461032 TGTCCGTTCCAGCAAAAATTAAT 57.539 34.783 0.00 0.00 0.00 1.40
104 105 4.920640 TGTCCGTTCCAGCAAAAATTAA 57.079 36.364 0.00 0.00 0.00 1.40
105 106 4.920640 TTGTCCGTTCCAGCAAAAATTA 57.079 36.364 0.00 0.00 0.00 1.40
106 107 3.810310 TTGTCCGTTCCAGCAAAAATT 57.190 38.095 0.00 0.00 0.00 1.82
107 108 3.810310 TTTGTCCGTTCCAGCAAAAAT 57.190 38.095 0.00 0.00 0.00 1.82
108 109 3.383185 AGATTTGTCCGTTCCAGCAAAAA 59.617 39.130 0.00 0.00 34.99 1.94
109 110 2.955660 AGATTTGTCCGTTCCAGCAAAA 59.044 40.909 0.00 0.00 34.99 2.44
110 111 2.582052 AGATTTGTCCGTTCCAGCAAA 58.418 42.857 0.00 0.00 35.66 3.68
111 112 2.270352 AGATTTGTCCGTTCCAGCAA 57.730 45.000 0.00 0.00 0.00 3.91
112 113 2.270352 AAGATTTGTCCGTTCCAGCA 57.730 45.000 0.00 0.00 0.00 4.41
113 114 3.643159 AAAAGATTTGTCCGTTCCAGC 57.357 42.857 0.00 0.00 0.00 4.85
114 115 3.735746 GCAAAAAGATTTGTCCGTTCCAG 59.264 43.478 3.55 0.00 46.19 3.86
115 116 3.383185 AGCAAAAAGATTTGTCCGTTCCA 59.617 39.130 3.55 0.00 46.19 3.53
116 117 3.977427 AGCAAAAAGATTTGTCCGTTCC 58.023 40.909 3.55 0.00 46.19 3.62
117 118 5.040635 TGAAGCAAAAAGATTTGTCCGTTC 58.959 37.500 3.55 3.36 46.19 3.95
118 119 5.004922 TGAAGCAAAAAGATTTGTCCGTT 57.995 34.783 3.55 0.00 46.19 4.44
119 120 4.647424 TGAAGCAAAAAGATTTGTCCGT 57.353 36.364 3.55 0.00 46.19 4.69
120 121 4.209080 GGTTGAAGCAAAAAGATTTGTCCG 59.791 41.667 3.55 0.00 46.19 4.79
121 122 5.115480 TGGTTGAAGCAAAAAGATTTGTCC 58.885 37.500 0.00 0.00 46.19 4.02
122 123 5.812127 ACTGGTTGAAGCAAAAAGATTTGTC 59.188 36.000 0.00 0.00 46.19 3.18
123 124 5.733676 ACTGGTTGAAGCAAAAAGATTTGT 58.266 33.333 0.00 0.00 46.19 2.83
125 126 6.872920 TGTACTGGTTGAAGCAAAAAGATTT 58.127 32.000 0.00 0.00 0.00 2.17
126 127 6.461509 CCTGTACTGGTTGAAGCAAAAAGATT 60.462 38.462 10.53 0.00 0.00 2.40
127 128 5.010012 CCTGTACTGGTTGAAGCAAAAAGAT 59.990 40.000 10.53 0.00 0.00 2.40
128 129 4.338118 CCTGTACTGGTTGAAGCAAAAAGA 59.662 41.667 10.53 0.00 0.00 2.52
129 130 4.338118 TCCTGTACTGGTTGAAGCAAAAAG 59.662 41.667 17.42 0.00 0.00 2.27
130 131 4.274147 TCCTGTACTGGTTGAAGCAAAAA 58.726 39.130 17.42 0.00 0.00 1.94
131 132 3.882888 CTCCTGTACTGGTTGAAGCAAAA 59.117 43.478 17.42 0.00 0.00 2.44
132 133 3.135712 TCTCCTGTACTGGTTGAAGCAAA 59.864 43.478 17.42 0.00 0.00 3.68
133 134 2.703536 TCTCCTGTACTGGTTGAAGCAA 59.296 45.455 17.42 0.00 0.00 3.91
134 135 2.325484 TCTCCTGTACTGGTTGAAGCA 58.675 47.619 17.42 0.00 0.00 3.91
135 136 3.618690 ATCTCCTGTACTGGTTGAAGC 57.381 47.619 17.42 0.00 0.00 3.86
136 137 6.263168 ACAAAAATCTCCTGTACTGGTTGAAG 59.737 38.462 17.42 8.47 0.00 3.02
137 138 6.126409 ACAAAAATCTCCTGTACTGGTTGAA 58.874 36.000 17.42 3.75 0.00 2.69
138 139 5.690865 ACAAAAATCTCCTGTACTGGTTGA 58.309 37.500 17.42 16.09 0.00 3.18
139 140 6.391227 AACAAAAATCTCCTGTACTGGTTG 57.609 37.500 17.42 14.84 0.00 3.77
140 141 6.183360 CCAAACAAAAATCTCCTGTACTGGTT 60.183 38.462 17.42 3.32 0.00 3.67
141 142 5.301805 CCAAACAAAAATCTCCTGTACTGGT 59.698 40.000 17.42 0.00 0.00 4.00
142 143 5.301805 ACCAAACAAAAATCTCCTGTACTGG 59.698 40.000 12.42 12.42 34.56 4.00
143 144 6.391227 ACCAAACAAAAATCTCCTGTACTG 57.609 37.500 0.00 0.00 0.00 2.74
144 145 7.418337 AAACCAAACAAAAATCTCCTGTACT 57.582 32.000 0.00 0.00 0.00 2.73
145 146 6.416750 CGAAACCAAACAAAAATCTCCTGTAC 59.583 38.462 0.00 0.00 0.00 2.90
146 147 6.319152 TCGAAACCAAACAAAAATCTCCTGTA 59.681 34.615 0.00 0.00 0.00 2.74
147 148 5.126384 TCGAAACCAAACAAAAATCTCCTGT 59.874 36.000 0.00 0.00 0.00 4.00
148 149 5.587289 TCGAAACCAAACAAAAATCTCCTG 58.413 37.500 0.00 0.00 0.00 3.86
149 150 5.845391 TCGAAACCAAACAAAAATCTCCT 57.155 34.783 0.00 0.00 0.00 3.69
150 151 7.477144 AAATCGAAACCAAACAAAAATCTCC 57.523 32.000 0.00 0.00 0.00 3.71
151 152 9.209297 CAAAAATCGAAACCAAACAAAAATCTC 57.791 29.630 0.00 0.00 0.00 2.75
152 153 7.696035 GCAAAAATCGAAACCAAACAAAAATCT 59.304 29.630 0.00 0.00 0.00 2.40
153 154 7.696035 AGCAAAAATCGAAACCAAACAAAAATC 59.304 29.630 0.00 0.00 0.00 2.17
154 155 7.484324 CAGCAAAAATCGAAACCAAACAAAAAT 59.516 29.630 0.00 0.00 0.00 1.82
155 156 6.798959 CAGCAAAAATCGAAACCAAACAAAAA 59.201 30.769 0.00 0.00 0.00 1.94
156 157 6.310197 CAGCAAAAATCGAAACCAAACAAAA 58.690 32.000 0.00 0.00 0.00 2.44
157 158 5.163814 CCAGCAAAAATCGAAACCAAACAAA 60.164 36.000 0.00 0.00 0.00 2.83
158 159 4.331168 CCAGCAAAAATCGAAACCAAACAA 59.669 37.500 0.00 0.00 0.00 2.83
159 160 3.868077 CCAGCAAAAATCGAAACCAAACA 59.132 39.130 0.00 0.00 0.00 2.83
160 161 4.116238 TCCAGCAAAAATCGAAACCAAAC 58.884 39.130 0.00 0.00 0.00 2.93
161 162 4.392921 TCCAGCAAAAATCGAAACCAAA 57.607 36.364 0.00 0.00 0.00 3.28
162 163 4.116238 GTTCCAGCAAAAATCGAAACCAA 58.884 39.130 0.00 0.00 0.00 3.67
163 164 3.491792 GGTTCCAGCAAAAATCGAAACCA 60.492 43.478 3.98 0.00 0.00 3.67
164 165 3.057019 GGTTCCAGCAAAAATCGAAACC 58.943 45.455 0.00 0.00 0.00 3.27
165 166 3.489416 GTGGTTCCAGCAAAAATCGAAAC 59.511 43.478 0.00 0.00 0.00 2.78
166 167 3.491792 GGTGGTTCCAGCAAAAATCGAAA 60.492 43.478 14.98 0.00 34.91 3.46
167 168 2.035321 GGTGGTTCCAGCAAAAATCGAA 59.965 45.455 14.98 0.00 34.91 3.71
168 169 1.611491 GGTGGTTCCAGCAAAAATCGA 59.389 47.619 14.98 0.00 34.91 3.59
169 170 1.339610 TGGTGGTTCCAGCAAAAATCG 59.660 47.619 19.35 0.00 41.93 3.34
180 181 3.913089 CAGCAAACTTAATGGTGGTTCC 58.087 45.455 0.00 0.00 41.38 3.62
185 186 3.611530 CGGTTCCAGCAAACTTAATGGTG 60.612 47.826 0.71 0.71 43.92 4.17
186 187 2.556622 CGGTTCCAGCAAACTTAATGGT 59.443 45.455 0.00 0.00 34.32 3.55
187 188 2.094752 CCGGTTCCAGCAAACTTAATGG 60.095 50.000 0.00 0.00 0.00 3.16
188 189 2.671070 GCCGGTTCCAGCAAACTTAATG 60.671 50.000 1.90 0.00 0.00 1.90
189 190 1.544246 GCCGGTTCCAGCAAACTTAAT 59.456 47.619 1.90 0.00 0.00 1.40
190 191 0.955905 GCCGGTTCCAGCAAACTTAA 59.044 50.000 1.90 0.00 0.00 1.85
191 192 0.179015 TGCCGGTTCCAGCAAACTTA 60.179 50.000 1.90 0.00 35.69 2.24
192 193 1.040339 TTGCCGGTTCCAGCAAACTT 61.040 50.000 9.66 0.00 45.51 2.66
193 194 1.454847 TTGCCGGTTCCAGCAAACT 60.455 52.632 9.66 0.00 45.51 2.66
194 195 3.124686 TTGCCGGTTCCAGCAAAC 58.875 55.556 9.66 0.00 45.51 2.93
196 197 1.112315 ACATTTGCCGGTTCCAGCAA 61.112 50.000 1.90 8.21 46.74 3.91
197 198 1.112315 AACATTTGCCGGTTCCAGCA 61.112 50.000 1.90 0.00 37.18 4.41
198 199 0.033366 AAACATTTGCCGGTTCCAGC 59.967 50.000 1.90 0.00 0.00 4.85
199 200 2.524569 AAAACATTTGCCGGTTCCAG 57.475 45.000 1.90 0.00 0.00 3.86
200 201 2.555199 CAAAAACATTTGCCGGTTCCA 58.445 42.857 1.90 0.00 0.00 3.53
209 210 6.180771 ACTTGGTTGAAGCAAAAACATTTG 57.819 33.333 11.19 0.00 34.95 2.32
210 211 7.913674 TTACTTGGTTGAAGCAAAAACATTT 57.086 28.000 11.19 0.00 34.95 2.32
211 212 9.777297 ATATTACTTGGTTGAAGCAAAAACATT 57.223 25.926 11.19 0.00 34.95 2.71
212 213 9.777297 AATATTACTTGGTTGAAGCAAAAACAT 57.223 25.926 11.19 1.30 34.95 2.71
213 214 9.606631 AAATATTACTTGGTTGAAGCAAAAACA 57.393 25.926 11.19 0.00 34.95 2.83
259 260 3.196463 CAACTTGCACTGCCATGAAAAA 58.804 40.909 0.00 0.00 0.00 1.94
260 261 2.483363 CCAACTTGCACTGCCATGAAAA 60.483 45.455 0.00 0.00 0.00 2.29
261 262 1.068895 CCAACTTGCACTGCCATGAAA 59.931 47.619 0.00 0.00 0.00 2.69
262 263 0.675083 CCAACTTGCACTGCCATGAA 59.325 50.000 0.00 0.00 0.00 2.57
263 264 1.180456 CCCAACTTGCACTGCCATGA 61.180 55.000 0.00 0.00 0.00 3.07
264 265 1.290955 CCCAACTTGCACTGCCATG 59.709 57.895 0.00 0.00 0.00 3.66
265 266 2.576832 GCCCAACTTGCACTGCCAT 61.577 57.895 0.00 0.00 0.00 4.40
266 267 3.225798 GCCCAACTTGCACTGCCA 61.226 61.111 0.00 0.00 0.00 4.92
267 268 2.496828 GATGCCCAACTTGCACTGCC 62.497 60.000 0.00 0.00 42.38 4.85
268 269 1.080298 GATGCCCAACTTGCACTGC 60.080 57.895 0.00 0.00 42.38 4.40
269 270 1.210931 CGATGCCCAACTTGCACTG 59.789 57.895 0.00 0.00 42.38 3.66
270 271 1.973281 CCGATGCCCAACTTGCACT 60.973 57.895 0.00 0.00 42.38 4.40
271 272 2.568090 CCGATGCCCAACTTGCAC 59.432 61.111 0.00 0.00 42.38 4.57
272 273 2.676121 CCCGATGCCCAACTTGCA 60.676 61.111 0.00 0.00 43.97 4.08
273 274 3.451894 CCCCGATGCCCAACTTGC 61.452 66.667 0.00 0.00 0.00 4.01
274 275 1.076777 ATCCCCGATGCCCAACTTG 60.077 57.895 0.00 0.00 0.00 3.16
275 276 1.076777 CATCCCCGATGCCCAACTT 60.077 57.895 0.00 0.00 33.17 2.66
276 277 1.863155 AACATCCCCGATGCCCAACT 61.863 55.000 1.54 0.00 43.15 3.16
277 278 0.106918 TAACATCCCCGATGCCCAAC 60.107 55.000 1.54 0.00 43.15 3.77
278 279 0.106918 GTAACATCCCCGATGCCCAA 60.107 55.000 1.54 0.00 43.15 4.12
279 280 1.275421 TGTAACATCCCCGATGCCCA 61.275 55.000 1.54 0.00 43.15 5.36
280 281 0.106918 TTGTAACATCCCCGATGCCC 60.107 55.000 1.54 0.00 43.15 5.36
281 282 1.021968 GTTGTAACATCCCCGATGCC 58.978 55.000 1.54 0.00 43.15 4.40
282 283 1.021968 GGTTGTAACATCCCCGATGC 58.978 55.000 1.54 0.00 43.15 3.91
283 284 2.411628 TGGTTGTAACATCCCCGATG 57.588 50.000 0.08 0.08 44.71 3.84
284 285 2.241176 ACATGGTTGTAACATCCCCGAT 59.759 45.455 0.00 0.00 33.16 4.18
285 286 1.631388 ACATGGTTGTAACATCCCCGA 59.369 47.619 0.00 0.00 33.16 5.14
286 287 2.014128 GACATGGTTGTAACATCCCCG 58.986 52.381 0.00 0.00 35.79 5.73
287 288 2.014128 CGACATGGTTGTAACATCCCC 58.986 52.381 0.00 0.00 35.79 4.81
288 289 2.676342 GTCGACATGGTTGTAACATCCC 59.324 50.000 11.55 0.00 35.79 3.85
289 290 2.676342 GGTCGACATGGTTGTAACATCC 59.324 50.000 18.91 0.00 35.79 3.51
290 291 2.347452 CGGTCGACATGGTTGTAACATC 59.653 50.000 18.91 0.00 35.79 3.06
291 292 2.289195 ACGGTCGACATGGTTGTAACAT 60.289 45.455 18.91 0.00 35.79 2.71
292 293 1.068895 ACGGTCGACATGGTTGTAACA 59.931 47.619 18.91 0.00 35.79 2.41
293 294 1.458064 CACGGTCGACATGGTTGTAAC 59.542 52.381 18.91 0.00 35.79 2.50
294 295 1.785768 CACGGTCGACATGGTTGTAA 58.214 50.000 18.91 0.00 35.79 2.41
295 296 0.668096 GCACGGTCGACATGGTTGTA 60.668 55.000 18.91 0.00 35.79 2.41
296 297 1.959226 GCACGGTCGACATGGTTGT 60.959 57.895 18.91 2.57 39.32 3.32
297 298 1.667830 AGCACGGTCGACATGGTTG 60.668 57.895 18.91 7.26 0.00 3.77
298 299 1.667830 CAGCACGGTCGACATGGTT 60.668 57.895 18.91 0.29 0.00 3.67
299 300 2.048222 CAGCACGGTCGACATGGT 60.048 61.111 18.91 17.00 0.00 3.55
300 301 2.048222 ACAGCACGGTCGACATGG 60.048 61.111 18.91 8.40 0.00 3.66
301 302 2.382746 CCACAGCACGGTCGACATG 61.383 63.158 18.91 15.69 0.00 3.21
302 303 2.048222 CCACAGCACGGTCGACAT 60.048 61.111 18.91 1.15 0.00 3.06
303 304 2.787567 TTCCACAGCACGGTCGACA 61.788 57.895 18.91 0.00 0.00 4.35
304 305 2.028484 TTCCACAGCACGGTCGAC 59.972 61.111 7.13 7.13 0.00 4.20
305 306 2.028484 GTTCCACAGCACGGTCGA 59.972 61.111 0.00 0.00 0.00 4.20
306 307 3.041940 GGTTCCACAGCACGGTCG 61.042 66.667 0.00 0.00 0.00 4.79
307 308 2.668550 GGGTTCCACAGCACGGTC 60.669 66.667 0.00 0.00 0.00 4.79
308 309 4.619227 CGGGTTCCACAGCACGGT 62.619 66.667 0.00 0.00 0.00 4.83
311 312 2.536997 ATAGGCGGGTTCCACAGCAC 62.537 60.000 0.00 0.00 0.00 4.40
312 313 2.297895 ATAGGCGGGTTCCACAGCA 61.298 57.895 0.00 0.00 0.00 4.41
313 314 1.819632 CATAGGCGGGTTCCACAGC 60.820 63.158 0.00 0.00 0.00 4.40
314 315 0.035439 AACATAGGCGGGTTCCACAG 60.035 55.000 0.00 0.00 0.00 3.66
315 316 0.035820 GAACATAGGCGGGTTCCACA 60.036 55.000 7.46 0.00 37.92 4.17
316 317 1.087771 CGAACATAGGCGGGTTCCAC 61.088 60.000 11.47 0.00 40.13 4.02
317 318 1.219664 CGAACATAGGCGGGTTCCA 59.780 57.895 11.47 0.00 40.13 3.53
318 319 0.529992 CTCGAACATAGGCGGGTTCC 60.530 60.000 11.47 0.00 40.13 3.62
319 320 1.152383 GCTCGAACATAGGCGGGTTC 61.152 60.000 8.33 8.33 39.92 3.62
320 321 1.153429 GCTCGAACATAGGCGGGTT 60.153 57.895 0.00 0.00 0.00 4.11
321 322 2.058595 AGCTCGAACATAGGCGGGT 61.059 57.895 0.00 0.00 0.00 5.28
322 323 1.592669 CAGCTCGAACATAGGCGGG 60.593 63.158 0.00 0.00 0.00 6.13
323 324 2.240500 GCAGCTCGAACATAGGCGG 61.241 63.158 0.00 0.00 0.00 6.13
324 325 1.083806 TTGCAGCTCGAACATAGGCG 61.084 55.000 0.00 0.00 0.00 5.52
325 326 0.375106 GTTGCAGCTCGAACATAGGC 59.625 55.000 0.00 0.00 0.00 3.93
326 327 1.009829 GGTTGCAGCTCGAACATAGG 58.990 55.000 0.00 0.00 0.00 2.57
327 328 1.725641 TGGTTGCAGCTCGAACATAG 58.274 50.000 0.00 0.00 0.00 2.23
328 329 2.009051 CATGGTTGCAGCTCGAACATA 58.991 47.619 0.00 0.00 34.23 2.29
329 330 0.806868 CATGGTTGCAGCTCGAACAT 59.193 50.000 0.00 3.20 36.95 2.71
330 331 2.246841 CATGGTTGCAGCTCGAACA 58.753 52.632 0.00 1.11 0.00 3.18
341 342 3.197790 CTCCGCTCGGCATGGTTG 61.198 66.667 2.96 0.00 34.68 3.77
342 343 4.473520 CCTCCGCTCGGCATGGTT 62.474 66.667 2.96 0.00 34.68 3.67
390 391 2.742372 ATTCGTGCCACCGTGCTC 60.742 61.111 0.00 0.00 0.00 4.26
391 392 3.049674 CATTCGTGCCACCGTGCT 61.050 61.111 0.00 0.00 0.00 4.40
392 393 3.047280 TCATTCGTGCCACCGTGC 61.047 61.111 0.00 0.00 0.00 5.34
393 394 2.677003 GGTCATTCGTGCCACCGTG 61.677 63.158 0.00 0.00 0.00 4.94
394 395 2.358247 GGTCATTCGTGCCACCGT 60.358 61.111 0.00 0.00 0.00 4.83
395 396 3.487202 CGGTCATTCGTGCCACCG 61.487 66.667 4.79 4.79 45.38 4.94
396 397 3.124921 CCGGTCATTCGTGCCACC 61.125 66.667 0.00 0.00 0.00 4.61
397 398 3.799755 GCCGGTCATTCGTGCCAC 61.800 66.667 1.90 0.00 0.00 5.01
398 399 3.834013 TTGCCGGTCATTCGTGCCA 62.834 57.895 1.90 0.00 0.00 4.92
399 400 3.039202 CTTGCCGGTCATTCGTGCC 62.039 63.158 1.90 0.00 0.00 5.01
400 401 2.480555 CTTGCCGGTCATTCGTGC 59.519 61.111 1.90 0.00 0.00 5.34
401 402 2.244436 CTGCTTGCCGGTCATTCGTG 62.244 60.000 1.90 0.00 0.00 4.35
402 403 2.031919 TGCTTGCCGGTCATTCGT 59.968 55.556 1.90 0.00 0.00 3.85
403 404 2.753966 CCTGCTTGCCGGTCATTCG 61.754 63.158 1.90 0.00 0.00 3.34
404 405 1.372087 CTCCTGCTTGCCGGTCATTC 61.372 60.000 1.90 0.00 0.00 2.67
405 406 1.377725 CTCCTGCTTGCCGGTCATT 60.378 57.895 1.90 0.00 0.00 2.57
406 407 1.841302 TTCTCCTGCTTGCCGGTCAT 61.841 55.000 1.90 0.00 0.00 3.06
407 408 2.454832 CTTCTCCTGCTTGCCGGTCA 62.455 60.000 1.90 0.00 0.00 4.02
408 409 1.743252 CTTCTCCTGCTTGCCGGTC 60.743 63.158 1.90 0.00 0.00 4.79
409 410 2.348998 CTTCTCCTGCTTGCCGGT 59.651 61.111 1.90 0.00 0.00 5.28
410 411 3.130160 GCTTCTCCTGCTTGCCGG 61.130 66.667 0.00 0.00 0.00 6.13
411 412 3.130160 GGCTTCTCCTGCTTGCCG 61.130 66.667 0.00 0.00 33.96 5.69
412 413 3.130160 CGGCTTCTCCTGCTTGCC 61.130 66.667 0.00 0.00 40.14 4.52
413 414 2.046892 TCGGCTTCTCCTGCTTGC 60.047 61.111 0.00 0.00 0.00 4.01
414 415 1.449246 CCTCGGCTTCTCCTGCTTG 60.449 63.158 0.00 0.00 0.00 4.01
415 416 1.610673 TCCTCGGCTTCTCCTGCTT 60.611 57.895 0.00 0.00 0.00 3.91
416 417 2.038007 TCCTCGGCTTCTCCTGCT 59.962 61.111 0.00 0.00 0.00 4.24
417 418 2.172483 TTGTCCTCGGCTTCTCCTGC 62.172 60.000 0.00 0.00 0.00 4.85
418 419 0.108424 CTTGTCCTCGGCTTCTCCTG 60.108 60.000 0.00 0.00 0.00 3.86
419 420 0.543174 ACTTGTCCTCGGCTTCTCCT 60.543 55.000 0.00 0.00 0.00 3.69
420 421 0.390472 CACTTGTCCTCGGCTTCTCC 60.390 60.000 0.00 0.00 0.00 3.71
421 422 1.016653 GCACTTGTCCTCGGCTTCTC 61.017 60.000 0.00 0.00 0.00 2.87
422 423 1.004440 GCACTTGTCCTCGGCTTCT 60.004 57.895 0.00 0.00 0.00 2.85
423 424 2.383527 CGCACTTGTCCTCGGCTTC 61.384 63.158 0.00 0.00 0.00 3.86
424 425 2.357517 CGCACTTGTCCTCGGCTT 60.358 61.111 0.00 0.00 0.00 4.35
425 426 4.379243 CCGCACTTGTCCTCGGCT 62.379 66.667 0.00 0.00 35.20 5.52
447 448 4.662961 TCCACACGCGCTCACCAG 62.663 66.667 5.73 0.00 0.00 4.00
448 449 4.662961 CTCCACACGCGCTCACCA 62.663 66.667 5.73 0.00 0.00 4.17
449 450 4.664677 ACTCCACACGCGCTCACC 62.665 66.667 5.73 0.00 0.00 4.02
450 451 3.106407 GACTCCACACGCGCTCAC 61.106 66.667 5.73 0.00 0.00 3.51
451 452 4.357947 GGACTCCACACGCGCTCA 62.358 66.667 5.73 0.00 0.00 4.26
474 475 1.439679 AACTAGTTAGGCGTGCTTGC 58.560 50.000 6.26 0.00 0.00 4.01
475 476 2.159627 CCAAACTAGTTAGGCGTGCTTG 59.840 50.000 8.92 0.00 0.00 4.01
476 477 2.224450 ACCAAACTAGTTAGGCGTGCTT 60.224 45.455 8.92 0.00 0.00 3.91
477 478 1.346722 ACCAAACTAGTTAGGCGTGCT 59.653 47.619 8.92 0.00 0.00 4.40
478 479 1.804601 ACCAAACTAGTTAGGCGTGC 58.195 50.000 8.92 0.00 0.00 5.34
479 480 4.445452 TCTACCAAACTAGTTAGGCGTG 57.555 45.455 8.92 2.84 0.00 5.34
480 481 4.322273 GGTTCTACCAAACTAGTTAGGCGT 60.322 45.833 8.92 5.42 38.42 5.68
481 482 4.081807 AGGTTCTACCAAACTAGTTAGGCG 60.082 45.833 8.92 0.00 41.95 5.52
482 483 5.417754 AGGTTCTACCAAACTAGTTAGGC 57.582 43.478 8.92 0.27 41.95 3.93
483 484 8.687292 AAAAAGGTTCTACCAAACTAGTTAGG 57.313 34.615 8.92 4.41 41.95 2.69
484 485 8.781196 GGAAAAAGGTTCTACCAAACTAGTTAG 58.219 37.037 8.92 6.29 41.95 2.34
485 486 8.496916 AGGAAAAAGGTTCTACCAAACTAGTTA 58.503 33.333 8.92 0.00 41.95 2.24
486 487 7.284716 CAGGAAAAAGGTTCTACCAAACTAGTT 59.715 37.037 1.12 1.12 41.95 2.24
487 488 6.771267 CAGGAAAAAGGTTCTACCAAACTAGT 59.229 38.462 0.00 0.00 41.95 2.57
488 489 6.294010 GCAGGAAAAAGGTTCTACCAAACTAG 60.294 42.308 0.00 0.00 41.95 2.57
489 490 5.533528 GCAGGAAAAAGGTTCTACCAAACTA 59.466 40.000 0.00 0.00 41.95 2.24
490 491 4.341235 GCAGGAAAAAGGTTCTACCAAACT 59.659 41.667 0.00 0.00 41.95 2.66
491 492 4.098807 TGCAGGAAAAAGGTTCTACCAAAC 59.901 41.667 0.00 0.00 41.95 2.93
492 493 4.282496 TGCAGGAAAAAGGTTCTACCAAA 58.718 39.130 0.00 0.00 41.95 3.28
493 494 3.904717 TGCAGGAAAAAGGTTCTACCAA 58.095 40.909 0.00 0.00 41.95 3.67
494 495 3.586470 TGCAGGAAAAAGGTTCTACCA 57.414 42.857 0.00 0.00 41.95 3.25
495 496 3.826729 ACATGCAGGAAAAAGGTTCTACC 59.173 43.478 4.84 0.00 38.99 3.18
496 497 5.453567 AACATGCAGGAAAAAGGTTCTAC 57.546 39.130 4.84 0.00 0.00 2.59
497 498 5.596361 TCAAACATGCAGGAAAAAGGTTCTA 59.404 36.000 4.84 0.00 0.00 2.10
498 499 4.405358 TCAAACATGCAGGAAAAAGGTTCT 59.595 37.500 4.84 0.00 0.00 3.01
499 500 4.507756 GTCAAACATGCAGGAAAAAGGTTC 59.492 41.667 4.84 0.00 0.00 3.62
500 501 4.162131 AGTCAAACATGCAGGAAAAAGGTT 59.838 37.500 4.84 0.00 0.00 3.50
501 502 3.706086 AGTCAAACATGCAGGAAAAAGGT 59.294 39.130 4.84 0.00 0.00 3.50
502 503 4.326504 AGTCAAACATGCAGGAAAAAGG 57.673 40.909 4.84 0.00 0.00 3.11
503 504 6.457257 CCAAAAGTCAAACATGCAGGAAAAAG 60.457 38.462 4.84 0.00 0.00 2.27
504 505 5.353678 CCAAAAGTCAAACATGCAGGAAAAA 59.646 36.000 4.84 0.00 0.00 1.94
505 506 4.874966 CCAAAAGTCAAACATGCAGGAAAA 59.125 37.500 4.84 0.00 0.00 2.29
506 507 4.440880 CCAAAAGTCAAACATGCAGGAAA 58.559 39.130 4.84 0.00 0.00 3.13
507 508 3.181467 CCCAAAAGTCAAACATGCAGGAA 60.181 43.478 4.84 0.00 0.00 3.36
508 509 2.364970 CCCAAAAGTCAAACATGCAGGA 59.635 45.455 4.84 0.00 0.00 3.86
509 510 2.548493 CCCCAAAAGTCAAACATGCAGG 60.548 50.000 0.00 0.00 0.00 4.85
510 511 2.364970 TCCCCAAAAGTCAAACATGCAG 59.635 45.455 0.00 0.00 0.00 4.41
511 512 2.102252 GTCCCCAAAAGTCAAACATGCA 59.898 45.455 0.00 0.00 0.00 3.96
512 513 2.754472 GTCCCCAAAAGTCAAACATGC 58.246 47.619 0.00 0.00 0.00 4.06
513 514 2.621055 TCGTCCCCAAAAGTCAAACATG 59.379 45.455 0.00 0.00 0.00 3.21
514 515 2.938838 TCGTCCCCAAAAGTCAAACAT 58.061 42.857 0.00 0.00 0.00 2.71
515 516 2.421751 TCGTCCCCAAAAGTCAAACA 57.578 45.000 0.00 0.00 0.00 2.83
516 517 2.946990 TCTTCGTCCCCAAAAGTCAAAC 59.053 45.455 0.00 0.00 0.00 2.93
517 518 3.284793 TCTTCGTCCCCAAAAGTCAAA 57.715 42.857 0.00 0.00 0.00 2.69
518 519 3.284793 TTCTTCGTCCCCAAAAGTCAA 57.715 42.857 0.00 0.00 0.00 3.18
519 520 3.284793 TTTCTTCGTCCCCAAAAGTCA 57.715 42.857 0.00 0.00 0.00 3.41
520 521 4.642445 TTTTTCTTCGTCCCCAAAAGTC 57.358 40.909 0.00 0.00 0.00 3.01
547 548 8.385111 CGATACAGTCATTTTTAACCGTACAAT 58.615 33.333 0.00 0.00 0.00 2.71
548 549 7.384660 ACGATACAGTCATTTTTAACCGTACAA 59.615 33.333 0.00 0.00 0.00 2.41
549 550 6.867816 ACGATACAGTCATTTTTAACCGTACA 59.132 34.615 0.00 0.00 0.00 2.90
550 551 7.281991 ACGATACAGTCATTTTTAACCGTAC 57.718 36.000 0.00 0.00 0.00 3.67
551 552 7.218014 CGTACGATACAGTCATTTTTAACCGTA 59.782 37.037 10.44 0.00 0.00 4.02
552 553 6.033831 CGTACGATACAGTCATTTTTAACCGT 59.966 38.462 10.44 0.00 0.00 4.83
553 554 6.251163 TCGTACGATACAGTCATTTTTAACCG 59.749 38.462 15.28 0.00 0.00 4.44
554 555 7.510428 TCGTACGATACAGTCATTTTTAACC 57.490 36.000 15.28 0.00 0.00 2.85
555 556 7.989405 CGATCGTACGATACAGTCATTTTTAAC 59.011 37.037 29.48 10.90 34.60 2.01
556 557 7.909641 TCGATCGTACGATACAGTCATTTTTAA 59.090 33.333 29.48 0.00 37.37 1.52
557 558 7.374228 GTCGATCGTACGATACAGTCATTTTTA 59.626 37.037 29.48 4.56 43.93 1.52
558 559 6.195983 GTCGATCGTACGATACAGTCATTTTT 59.804 38.462 29.48 4.73 43.93 1.94
559 560 5.680229 GTCGATCGTACGATACAGTCATTTT 59.320 40.000 29.48 4.96 43.93 1.82
560 561 5.203370 GTCGATCGTACGATACAGTCATTT 58.797 41.667 29.48 5.52 43.93 2.32
561 562 4.271776 TGTCGATCGTACGATACAGTCATT 59.728 41.667 29.48 6.33 43.93 2.57
562 563 3.805971 TGTCGATCGTACGATACAGTCAT 59.194 43.478 29.48 7.12 43.93 3.06
563 564 3.189285 TGTCGATCGTACGATACAGTCA 58.811 45.455 29.48 21.83 43.93 3.41
564 565 3.848846 TGTCGATCGTACGATACAGTC 57.151 47.619 29.48 19.89 43.93 3.51
565 566 3.242543 GGTTGTCGATCGTACGATACAGT 60.243 47.826 29.48 9.56 43.93 3.55
566 567 3.286576 GGTTGTCGATCGTACGATACAG 58.713 50.000 29.48 22.14 43.93 2.74
567 568 2.285776 CGGTTGTCGATCGTACGATACA 60.286 50.000 29.48 26.05 43.93 2.29
568 569 2.033747 TCGGTTGTCGATCGTACGATAC 60.034 50.000 29.48 23.93 43.74 2.24
569 570 2.200899 TCGGTTGTCGATCGTACGATA 58.799 47.619 29.48 13.55 43.74 2.92
570 571 1.009078 TCGGTTGTCGATCGTACGAT 58.991 50.000 29.79 29.79 43.74 3.73
571 572 2.454921 TCGGTTGTCGATCGTACGA 58.545 52.632 21.93 21.93 43.74 3.43
586 587 0.802494 CTCAAATTTGGACCGGTCGG 59.198 55.000 27.68 7.97 42.03 4.79
587 588 0.168128 GCTCAAATTTGGACCGGTCG 59.832 55.000 27.68 12.50 0.00 4.79
588 589 0.526211 GGCTCAAATTTGGACCGGTC 59.474 55.000 27.04 27.04 0.00 4.79
589 590 1.241315 CGGCTCAAATTTGGACCGGT 61.241 55.000 29.73 6.92 40.74 5.28
590 591 1.506262 CGGCTCAAATTTGGACCGG 59.494 57.895 29.73 18.49 40.74 5.28
591 592 1.506262 CCGGCTCAAATTTGGACCG 59.494 57.895 30.11 30.11 42.62 4.79
592 593 1.215382 GCCGGCTCAAATTTGGACC 59.785 57.895 22.15 16.93 0.00 4.46
593 594 1.154035 CGCCGGCTCAAATTTGGAC 60.154 57.895 26.68 9.95 0.00 4.02
594 595 2.988688 GCGCCGGCTCAAATTTGGA 61.989 57.895 26.68 4.50 35.83 3.53
595 596 2.506881 GCGCCGGCTCAAATTTGG 60.507 61.111 26.68 6.32 35.83 3.28
596 597 2.088178 GTGCGCCGGCTCAAATTTG 61.088 57.895 22.78 12.15 40.82 2.32
597 598 2.258286 GTGCGCCGGCTCAAATTT 59.742 55.556 22.78 0.00 40.82 1.82
598 599 3.747976 GGTGCGCCGGCTCAAATT 61.748 61.111 22.78 0.00 40.82 1.82
615 616 4.728102 TAGGACAACGCGGTGCCG 62.728 66.667 26.87 0.00 43.09 5.69
616 617 2.125269 ATAGGACAACGCGGTGCC 60.125 61.111 26.87 25.31 0.00 5.01
617 618 1.017177 TTCATAGGACAACGCGGTGC 61.017 55.000 26.87 17.09 0.00 5.01
618 619 1.434555 TTTCATAGGACAACGCGGTG 58.565 50.000 25.19 25.19 0.00 4.94
619 620 2.172851 TTTTCATAGGACAACGCGGT 57.827 45.000 12.47 0.00 0.00 5.68
620 621 4.319477 CCATATTTTCATAGGACAACGCGG 60.319 45.833 12.47 0.00 0.00 6.46
621 622 4.272504 ACCATATTTTCATAGGACAACGCG 59.727 41.667 3.53 3.53 0.00 6.01
622 623 5.751243 ACCATATTTTCATAGGACAACGC 57.249 39.130 0.00 0.00 0.00 4.84
623 624 6.477688 ACGTACCATATTTTCATAGGACAACG 59.522 38.462 0.00 0.00 0.00 4.10
624 625 7.781548 ACGTACCATATTTTCATAGGACAAC 57.218 36.000 0.00 0.00 0.00 3.32
625 626 8.795842 AAACGTACCATATTTTCATAGGACAA 57.204 30.769 0.00 0.00 0.00 3.18
626 627 8.795842 AAAACGTACCATATTTTCATAGGACA 57.204 30.769 0.00 0.00 0.00 4.02
627 628 9.498307 CAAAAACGTACCATATTTTCATAGGAC 57.502 33.333 0.00 0.00 0.00 3.85
628 629 8.185505 GCAAAAACGTACCATATTTTCATAGGA 58.814 33.333 0.00 0.00 0.00 2.94
629 630 7.165154 CGCAAAAACGTACCATATTTTCATAGG 59.835 37.037 0.00 0.00 0.00 2.57
630 631 7.694784 ACGCAAAAACGTACCATATTTTCATAG 59.305 33.333 0.00 0.00 46.19 2.23
631 632 7.528307 ACGCAAAAACGTACCATATTTTCATA 58.472 30.769 0.00 0.00 46.19 2.15
632 633 6.383415 ACGCAAAAACGTACCATATTTTCAT 58.617 32.000 0.00 0.00 46.19 2.57
633 634 5.759963 ACGCAAAAACGTACCATATTTTCA 58.240 33.333 0.00 0.00 46.19 2.69
644 645 4.494350 AGAGAGAGTACGCAAAAACGTA 57.506 40.909 0.00 0.00 46.19 3.57
646 647 4.710528 AAAGAGAGAGTACGCAAAAACG 57.289 40.909 0.00 0.00 39.50 3.60
647 648 8.831000 TTTTTAAAGAGAGAGTACGCAAAAAC 57.169 30.769 0.00 0.00 0.00 2.43
678 679 2.354188 TGGACGCGTGTTCTGTCG 60.354 61.111 20.70 0.00 33.45 4.35
685 688 0.179094 TTTCTTGAGTGGACGCGTGT 60.179 50.000 20.70 0.00 0.00 4.49
822 827 1.659098 CGATCGCCACTTTTGTAGGAC 59.341 52.381 0.26 0.00 0.00 3.85
941 953 2.287103 TCGATCGAGGTCTTGTGATACG 59.713 50.000 15.15 0.00 0.00 3.06
943 955 4.750952 GATCGATCGAGGTCTTGTGATA 57.249 45.455 23.84 0.00 0.00 2.15
995 1007 1.493950 GCTCGTCTTGCCCATCGATG 61.494 60.000 18.76 18.76 0.00 3.84
1260 1272 1.301009 GATGGCGATCCGGGAGTTC 60.301 63.158 0.00 0.00 34.14 3.01
1443 1455 4.148825 GCGTGGTCGATGGCCTCT 62.149 66.667 3.32 0.00 39.71 3.69
1506 1518 2.776526 ACCCTGAAGGCCCACACA 60.777 61.111 0.00 0.00 40.58 3.72
1714 1729 5.070001 AGAGTGGTAGACTATGCAGATCTC 58.930 45.833 0.00 0.00 33.83 2.75
1715 1730 5.060427 AGAGTGGTAGACTATGCAGATCT 57.940 43.478 0.00 0.00 33.83 2.75
2140 2159 1.808512 CGGTGGTGCAAGTCAACTACA 60.809 52.381 0.00 0.00 32.28 2.74
2576 2619 4.141779 CCAAGAGATGATGTGACTGGATCA 60.142 45.833 0.00 0.00 33.20 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.