Multiple sequence alignment - TraesCS7B01G218100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G218100 chr7B 100.000 2582 0 0 1 2582 403026385 403023804 0.000000e+00 4769.0
1 TraesCS7B01G218100 chr7B 80.508 354 62 5 2193 2544 693170241 693170589 5.480000e-67 265.0
2 TraesCS7B01G218100 chr7D 88.354 1537 98 27 570 2038 398003948 398005471 0.000000e+00 1772.0
3 TraesCS7B01G218100 chr7A 88.443 1471 91 29 639 2038 454057644 454059106 0.000000e+00 1701.0
4 TraesCS7B01G218100 chr6A 97.588 456 11 0 4 459 560435180 560435635 0.000000e+00 782.0
5 TraesCS7B01G218100 chr6A 96.499 457 16 0 3 459 4193695 4193239 0.000000e+00 756.0
6 TraesCS7B01G218100 chr6A 96.296 459 17 0 1 459 4143572 4143114 0.000000e+00 754.0
7 TraesCS7B01G218100 chr6A 95.887 462 16 3 1 459 4168423 4167962 0.000000e+00 745.0
8 TraesCS7B01G218100 chr6A 96.056 431 17 0 29 459 4218904 4218474 0.000000e+00 702.0
9 TraesCS7B01G218100 chr2B 97.168 459 13 0 1 459 183213094 183212636 0.000000e+00 776.0
10 TraesCS7B01G218100 chr2B 98.701 77 1 0 4 80 183213366 183213290 1.250000e-28 137.0
11 TraesCS7B01G218100 chr5A 96.514 459 15 1 1 459 691299762 691299305 0.000000e+00 758.0
12 TraesCS7B01G218100 chrUn 96.061 457 18 0 3 459 62718465 62718921 0.000000e+00 745.0
13 TraesCS7B01G218100 chrUn 96.259 401 15 0 59 459 399870339 399869939 0.000000e+00 658.0
14 TraesCS7B01G218100 chrUn 79.224 438 79 12 2113 2542 335703860 335703427 6.990000e-76 294.0
15 TraesCS7B01G218100 chr2A 82.432 444 67 8 2113 2552 83993888 83994324 6.740000e-101 377.0
16 TraesCS7B01G218100 chr2D 82.796 372 57 6 2184 2551 419360711 419360343 2.480000e-85 326.0
17 TraesCS7B01G218100 chr1A 79.295 454 85 7 2102 2552 551873583 551874030 2.500000e-80 309.0
18 TraesCS7B01G218100 chr3D 78.982 452 81 9 2114 2552 300932510 300932060 1.940000e-76 296.0
19 TraesCS7B01G218100 chr3D 79.525 337 65 3 2216 2551 85010254 85009921 1.190000e-58 237.0
20 TraesCS7B01G218100 chr3D 78.729 362 71 6 2193 2551 133918810 133919168 1.190000e-58 237.0
21 TraesCS7B01G218100 chr3B 78.856 402 75 9 2128 2522 708171093 708171491 1.970000e-66 263.0
22 TraesCS7B01G218100 chr3B 91.111 45 2 2 2 45 739351912 739351869 2.770000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G218100 chr7B 403023804 403026385 2581 True 4769.0 4769 100.0000 1 2582 1 chr7B.!!$R1 2581
1 TraesCS7B01G218100 chr7D 398003948 398005471 1523 False 1772.0 1772 88.3540 570 2038 1 chr7D.!!$F1 1468
2 TraesCS7B01G218100 chr7A 454057644 454059106 1462 False 1701.0 1701 88.4430 639 2038 1 chr7A.!!$F1 1399
3 TraesCS7B01G218100 chr2B 183212636 183213366 730 True 456.5 776 97.9345 1 459 2 chr2B.!!$R1 458

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
102 375 0.104855 ATCGCTGACGTGGCATGTAT 59.895 50.0 13.23 0.0 41.18 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2098 2490 0.105964 TTGAGGTGTCCGTCTGGTTG 59.894 55.0 0.0 0.0 36.3 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 375 0.104855 ATCGCTGACGTGGCATGTAT 59.895 50.000 13.23 0.00 41.18 2.29
136 409 1.592669 CGGCTTAGCTCATGGACGG 60.593 63.158 3.59 0.00 0.00 4.79
284 557 2.780643 CTGCTGTCGCCATGTTCG 59.219 61.111 0.00 0.00 34.43 3.95
312 585 1.604438 GCCGACGACATATGTATGCCA 60.604 52.381 8.71 0.00 37.19 4.92
319 592 2.548057 GACATATGTATGCCAACGGGTG 59.452 50.000 8.71 0.00 37.19 4.61
320 593 2.092646 ACATATGTATGCCAACGGGTGT 60.093 45.455 6.56 0.00 37.19 4.16
345 618 1.956629 GCTTAGCTCGTGGTAGCCCA 61.957 60.000 0.00 0.00 43.86 5.36
459 732 2.038837 GGCCAGTTTCCGGTAGTGC 61.039 63.158 0.00 0.00 0.00 4.40
460 733 2.038837 GCCAGTTTCCGGTAGTGCC 61.039 63.158 0.00 0.00 0.00 5.01
461 734 1.376812 CCAGTTTCCGGTAGTGCCC 60.377 63.158 0.00 0.00 0.00 5.36
462 735 1.376812 CAGTTTCCGGTAGTGCCCC 60.377 63.158 0.00 0.00 0.00 5.80
463 736 1.538135 AGTTTCCGGTAGTGCCCCT 60.538 57.895 0.00 0.00 0.00 4.79
464 737 0.252375 AGTTTCCGGTAGTGCCCCTA 60.252 55.000 0.00 0.00 0.00 3.53
465 738 0.107993 GTTTCCGGTAGTGCCCCTAC 60.108 60.000 0.00 2.78 44.56 3.18
470 743 4.800764 GTAGTGCCCCTACCAGGA 57.199 61.111 0.00 0.00 40.24 3.86
471 744 2.209475 GTAGTGCCCCTACCAGGAC 58.791 63.158 0.00 0.00 40.24 3.85
472 745 1.380785 TAGTGCCCCTACCAGGACG 60.381 63.158 0.00 0.00 37.67 4.79
473 746 4.468689 GTGCCCCTACCAGGACGC 62.469 72.222 0.00 0.00 37.67 5.19
476 749 4.143333 CCCCTACCAGGACGCGTG 62.143 72.222 20.70 4.12 37.67 5.34
477 750 4.143333 CCCTACCAGGACGCGTGG 62.143 72.222 20.70 15.63 44.01 4.94
500 773 4.476410 GCAGCGGGCGGTTTAAGC 62.476 66.667 0.00 0.00 0.00 3.09
510 783 3.636282 GCGGTTTAAGCCTGAGAAAAA 57.364 42.857 6.79 0.00 0.00 1.94
511 784 4.174411 GCGGTTTAAGCCTGAGAAAAAT 57.826 40.909 6.79 0.00 0.00 1.82
512 785 4.556233 GCGGTTTAAGCCTGAGAAAAATT 58.444 39.130 6.79 0.00 0.00 1.82
513 786 4.621460 GCGGTTTAAGCCTGAGAAAAATTC 59.379 41.667 6.79 0.00 0.00 2.17
514 787 5.768317 CGGTTTAAGCCTGAGAAAAATTCA 58.232 37.500 6.79 0.00 0.00 2.57
515 788 6.389906 CGGTTTAAGCCTGAGAAAAATTCAT 58.610 36.000 6.79 0.00 0.00 2.57
516 789 6.528072 CGGTTTAAGCCTGAGAAAAATTCATC 59.472 38.462 6.79 0.00 0.00 2.92
517 790 6.813649 GGTTTAAGCCTGAGAAAAATTCATCC 59.186 38.462 0.26 0.00 0.00 3.51
518 791 4.708726 AAGCCTGAGAAAAATTCATCCG 57.291 40.909 0.00 0.00 0.00 4.18
519 792 3.690460 AGCCTGAGAAAAATTCATCCGT 58.310 40.909 0.00 0.00 0.00 4.69
520 793 4.082125 AGCCTGAGAAAAATTCATCCGTT 58.918 39.130 0.00 0.00 0.00 4.44
521 794 4.524328 AGCCTGAGAAAAATTCATCCGTTT 59.476 37.500 0.00 0.00 0.00 3.60
522 795 5.011023 AGCCTGAGAAAAATTCATCCGTTTT 59.989 36.000 0.00 0.00 0.00 2.43
523 796 5.346011 GCCTGAGAAAAATTCATCCGTTTTC 59.654 40.000 0.00 0.00 40.14 2.29
525 798 7.574967 GCCTGAGAAAAATTCATCCGTTTTCTA 60.575 37.037 9.84 1.15 46.43 2.10
526 799 7.750903 CCTGAGAAAAATTCATCCGTTTTCTAC 59.249 37.037 9.84 5.92 46.43 2.59
527 800 8.160521 TGAGAAAAATTCATCCGTTTTCTACA 57.839 30.769 9.84 7.82 46.43 2.74
528 801 8.625651 TGAGAAAAATTCATCCGTTTTCTACAA 58.374 29.630 9.84 0.00 46.43 2.41
529 802 9.626045 GAGAAAAATTCATCCGTTTTCTACAAT 57.374 29.630 9.84 0.00 46.43 2.71
530 803 9.626045 AGAAAAATTCATCCGTTTTCTACAATC 57.374 29.630 8.46 0.00 45.29 2.67
531 804 9.626045 GAAAAATTCATCCGTTTTCTACAATCT 57.374 29.630 0.00 0.00 37.95 2.40
543 816 9.815936 CGTTTTCTACAATCTAAACGGTTTTAT 57.184 29.630 11.87 3.61 45.26 1.40
558 831 8.953507 AACGGTTTTATATTCGTTTACAAAGG 57.046 30.769 0.00 0.00 42.12 3.11
559 832 7.529158 ACGGTTTTATATTCGTTTACAAAGGG 58.471 34.615 0.00 0.00 31.38 3.95
560 833 6.469915 CGGTTTTATATTCGTTTACAAAGGGC 59.530 38.462 0.00 0.00 0.00 5.19
561 834 7.541162 GGTTTTATATTCGTTTACAAAGGGCT 58.459 34.615 0.00 0.00 0.00 5.19
562 835 8.676401 GGTTTTATATTCGTTTACAAAGGGCTA 58.324 33.333 0.00 0.00 0.00 3.93
563 836 9.712359 GTTTTATATTCGTTTACAAAGGGCTAG 57.288 33.333 0.00 0.00 0.00 3.42
564 837 8.441312 TTTATATTCGTTTACAAAGGGCTAGG 57.559 34.615 0.00 0.00 0.00 3.02
565 838 4.563140 ATTCGTTTACAAAGGGCTAGGA 57.437 40.909 0.00 0.00 0.00 2.94
566 839 3.323751 TCGTTTACAAAGGGCTAGGAC 57.676 47.619 0.00 0.00 0.00 3.85
567 840 2.901839 TCGTTTACAAAGGGCTAGGACT 59.098 45.455 0.00 0.00 0.00 3.85
568 841 4.088634 TCGTTTACAAAGGGCTAGGACTA 58.911 43.478 0.00 0.00 0.00 2.59
584 857 1.547372 GACTACTAGTTGCCAACGGGA 59.453 52.381 0.00 0.00 35.59 5.14
587 860 1.892209 ACTAGTTGCCAACGGGAAAG 58.108 50.000 1.20 0.00 34.18 2.62
591 864 2.104170 AGTTGCCAACGGGAAAGAAAA 58.896 42.857 1.20 0.00 34.18 2.29
592 865 2.698274 AGTTGCCAACGGGAAAGAAAAT 59.302 40.909 1.20 0.00 34.18 1.82
593 866 2.799978 GTTGCCAACGGGAAAGAAAATG 59.200 45.455 0.00 0.00 34.18 2.32
596 869 2.920647 GCCAACGGGAAAGAAAATGTCG 60.921 50.000 0.00 0.00 35.59 4.35
604 877 9.720769 AACGGGAAAGAAAATGTCGATATATAT 57.279 29.630 0.00 0.00 0.00 0.86
642 916 7.910584 TGTAGTCACATATCTCATGCCATATT 58.089 34.615 0.00 0.00 0.00 1.28
688 967 4.984161 GCTTGCACACAACAACAATTCTAT 59.016 37.500 0.00 0.00 0.00 1.98
785 1065 4.023365 GCATGATCCAAATTAGACCAGCTC 60.023 45.833 0.00 0.00 0.00 4.09
910 1206 1.412710 TCTCTTGACGCTTGTCCAACT 59.587 47.619 0.00 0.00 42.17 3.16
934 1230 2.857483 TGGATTCGGTTGCTTCTTGAA 58.143 42.857 0.00 0.00 0.00 2.69
996 1296 0.592500 TTCATCATCTCGCTCGACGC 60.593 55.000 0.00 0.40 43.23 5.19
1077 1378 7.704271 TGTTCCGTGAAGAAGTAGATATACTG 58.296 38.462 0.00 0.00 0.00 2.74
1168 1469 1.066752 CCATGGATTACGCCGACGA 59.933 57.895 5.56 0.00 43.93 4.20
1266 1567 2.053618 GGATACCAGCGGCAGAGAT 58.946 57.895 1.45 0.00 0.00 2.75
1350 1651 2.126189 GCGTCCGCGTCCTACTTT 60.126 61.111 4.92 0.00 40.81 2.66
1372 1679 3.214845 GCTAGCCACCCATGCTGC 61.215 66.667 2.29 0.00 39.91 5.25
1435 1747 7.511959 ACTAGTGCATATGAATTCGTCTCTA 57.488 36.000 6.97 0.84 0.00 2.43
1436 1748 7.364200 ACTAGTGCATATGAATTCGTCTCTAC 58.636 38.462 6.97 0.78 0.00 2.59
1438 1767 6.753180 AGTGCATATGAATTCGTCTCTACAT 58.247 36.000 6.97 0.00 0.00 2.29
1456 1785 7.124298 TCTCTACATACATAGCTTCACAAACCT 59.876 37.037 0.00 0.00 0.00 3.50
1473 1802 3.314307 ACCTCCTGATCCATTCGTCTA 57.686 47.619 0.00 0.00 0.00 2.59
1477 1806 4.554292 CTCCTGATCCATTCGTCTATGTG 58.446 47.826 0.00 0.00 0.00 3.21
1482 1811 4.022329 TGATCCATTCGTCTATGTGCGTAT 60.022 41.667 0.00 0.00 0.00 3.06
1495 1831 8.266682 GTCTATGTGCGTATGTAGTTGTAATTG 58.733 37.037 0.00 0.00 0.00 2.32
1507 1843 7.211573 TGTAGTTGTAATTGAGGAAAGACGAA 58.788 34.615 0.00 0.00 0.00 3.85
1520 1856 3.575965 AAGACGAATTGGATTTGTGGC 57.424 42.857 0.00 0.00 37.01 5.01
1524 1860 2.363680 ACGAATTGGATTTGTGGCACAA 59.636 40.909 28.09 28.09 44.16 3.33
1561 1897 0.666913 ATCATCGCATGGCTTTGAGC 59.333 50.000 0.00 0.00 41.46 4.26
1579 1917 2.747446 GAGCCTTTAACTTGCGATCCAA 59.253 45.455 0.00 0.00 0.00 3.53
1626 1987 5.163713 GGCAATTCAGTCCTAAAGCTAACAG 60.164 44.000 0.00 0.00 0.00 3.16
1684 2052 1.954146 CCACTAACACACACGCGCT 60.954 57.895 5.73 0.00 0.00 5.92
1707 2079 3.570125 CGCTCTCTCACCCATTCTATGTA 59.430 47.826 0.00 0.00 0.00 2.29
1734 2106 1.161563 TTGGCGTTCTTGGACGAACC 61.162 55.000 5.55 0.00 45.47 3.62
1822 2210 7.835822 AGGAATCTCTATATCTTGTCCGATTG 58.164 38.462 0.00 0.00 0.00 2.67
1953 2345 2.426024 CACCGGTCTCGATCTTTTCCTA 59.574 50.000 2.59 0.00 39.00 2.94
2010 2402 4.132336 GTGATCTATGGATGCATGTGTGT 58.868 43.478 10.37 0.00 31.46 3.72
2038 2430 3.285215 CCGATCCAGCTGCCATGC 61.285 66.667 8.66 0.00 0.00 4.06
2039 2431 3.646976 CGATCCAGCTGCCATGCG 61.647 66.667 8.66 3.26 38.13 4.73
2040 2432 2.515523 GATCCAGCTGCCATGCGT 60.516 61.111 8.66 0.00 38.13 5.24
2041 2433 2.044650 ATCCAGCTGCCATGCGTT 60.045 55.556 8.66 0.00 38.13 4.84
2042 2434 1.660560 GATCCAGCTGCCATGCGTTT 61.661 55.000 8.66 0.00 38.13 3.60
2043 2435 0.394216 ATCCAGCTGCCATGCGTTTA 60.394 50.000 8.66 0.00 38.13 2.01
2044 2436 1.137404 CCAGCTGCCATGCGTTTAC 59.863 57.895 8.66 0.00 38.13 2.01
2045 2437 1.585267 CCAGCTGCCATGCGTTTACA 61.585 55.000 8.66 0.00 38.13 2.41
2046 2438 0.179181 CAGCTGCCATGCGTTTACAG 60.179 55.000 0.00 0.00 38.13 2.74
2047 2439 1.514873 GCTGCCATGCGTTTACAGC 60.515 57.895 8.39 8.39 45.95 4.40
2048 2440 1.137404 CTGCCATGCGTTTACAGCC 59.863 57.895 0.00 0.00 0.00 4.85
2049 2441 2.100216 GCCATGCGTTTACAGCCG 59.900 61.111 0.00 0.00 0.00 5.52
2050 2442 2.791256 CCATGCGTTTACAGCCGG 59.209 61.111 0.00 0.00 0.00 6.13
2051 2443 2.760159 CCATGCGTTTACAGCCGGG 61.760 63.158 2.18 0.00 0.00 5.73
2052 2444 2.038269 CATGCGTTTACAGCCGGGT 61.038 57.895 0.00 0.00 0.00 5.28
2053 2445 2.038269 ATGCGTTTACAGCCGGGTG 61.038 57.895 31.30 31.30 0.00 4.61
2054 2446 2.357760 GCGTTTACAGCCGGGTGA 60.358 61.111 38.55 19.86 0.00 4.02
2055 2447 2.674084 GCGTTTACAGCCGGGTGAC 61.674 63.158 38.55 24.72 0.00 3.67
2067 2459 3.295800 GGTGACCCGAATCCGTCT 58.704 61.111 0.00 0.00 0.00 4.18
2068 2460 1.595357 GGTGACCCGAATCCGTCTT 59.405 57.895 0.00 0.00 0.00 3.01
2069 2461 0.819582 GGTGACCCGAATCCGTCTTA 59.180 55.000 0.00 0.00 0.00 2.10
2070 2462 1.205417 GGTGACCCGAATCCGTCTTAA 59.795 52.381 0.00 0.00 0.00 1.85
2071 2463 2.354003 GGTGACCCGAATCCGTCTTAAA 60.354 50.000 0.00 0.00 0.00 1.52
2072 2464 2.669924 GTGACCCGAATCCGTCTTAAAC 59.330 50.000 0.00 0.00 0.00 2.01
2073 2465 2.299582 TGACCCGAATCCGTCTTAAACA 59.700 45.455 0.00 0.00 0.00 2.83
2074 2466 2.669924 GACCCGAATCCGTCTTAAACAC 59.330 50.000 0.00 0.00 0.00 3.32
2075 2467 1.657094 CCCGAATCCGTCTTAAACACG 59.343 52.381 0.54 0.54 36.99 4.49
2082 2474 2.144482 CGTCTTAAACACGGTCCAGT 57.856 50.000 0.00 0.00 33.46 4.00
2083 2475 2.056577 CGTCTTAAACACGGTCCAGTC 58.943 52.381 0.00 0.00 33.46 3.51
2084 2476 2.544277 CGTCTTAAACACGGTCCAGTCA 60.544 50.000 0.00 0.00 33.46 3.41
2085 2477 3.460103 GTCTTAAACACGGTCCAGTCAA 58.540 45.455 0.00 0.00 0.00 3.18
2086 2478 3.872771 GTCTTAAACACGGTCCAGTCAAA 59.127 43.478 0.00 0.00 0.00 2.69
2087 2479 4.333372 GTCTTAAACACGGTCCAGTCAAAA 59.667 41.667 0.00 0.00 0.00 2.44
2088 2480 4.942483 TCTTAAACACGGTCCAGTCAAAAA 59.058 37.500 0.00 0.00 0.00 1.94
2112 2504 3.982576 AAAAATCAACCAGACGGACAC 57.017 42.857 0.00 0.00 35.59 3.67
2113 2505 1.892209 AAATCAACCAGACGGACACC 58.108 50.000 0.00 0.00 35.59 4.16
2114 2506 1.056660 AATCAACCAGACGGACACCT 58.943 50.000 0.00 0.00 35.59 4.00
2115 2507 0.608640 ATCAACCAGACGGACACCTC 59.391 55.000 0.00 0.00 35.59 3.85
2116 2508 0.757561 TCAACCAGACGGACACCTCA 60.758 55.000 0.00 0.00 35.59 3.86
2117 2509 0.105964 CAACCAGACGGACACCTCAA 59.894 55.000 0.00 0.00 35.59 3.02
2118 2510 0.834612 AACCAGACGGACACCTCAAA 59.165 50.000 0.00 0.00 35.59 2.69
2119 2511 0.106149 ACCAGACGGACACCTCAAAC 59.894 55.000 0.00 0.00 35.59 2.93
2120 2512 0.944311 CCAGACGGACACCTCAAACG 60.944 60.000 0.00 0.00 0.00 3.60
2121 2513 1.300697 AGACGGACACCTCAAACGC 60.301 57.895 0.00 0.00 0.00 4.84
2122 2514 2.280592 ACGGACACCTCAAACGCC 60.281 61.111 0.00 0.00 0.00 5.68
2123 2515 3.047877 CGGACACCTCAAACGCCC 61.048 66.667 0.00 0.00 0.00 6.13
2124 2516 2.112297 GGACACCTCAAACGCCCA 59.888 61.111 0.00 0.00 0.00 5.36
2125 2517 1.966451 GGACACCTCAAACGCCCAG 60.966 63.158 0.00 0.00 0.00 4.45
2126 2518 1.227853 GACACCTCAAACGCCCAGT 60.228 57.895 0.00 0.00 0.00 4.00
2127 2519 1.227853 ACACCTCAAACGCCCAGTC 60.228 57.895 0.00 0.00 0.00 3.51
2128 2520 1.071471 CACCTCAAACGCCCAGTCT 59.929 57.895 0.00 0.00 0.00 3.24
2129 2521 1.071471 ACCTCAAACGCCCAGTCTG 59.929 57.895 0.00 0.00 0.00 3.51
2130 2522 1.371183 CCTCAAACGCCCAGTCTGA 59.629 57.895 0.00 0.00 0.00 3.27
2131 2523 0.951040 CCTCAAACGCCCAGTCTGAC 60.951 60.000 0.00 0.00 0.00 3.51
2132 2524 0.951040 CTCAAACGCCCAGTCTGACC 60.951 60.000 3.76 0.00 0.00 4.02
2133 2525 2.030562 AAACGCCCAGTCTGACCG 59.969 61.111 3.76 6.02 0.00 4.79
2134 2526 2.504274 AAACGCCCAGTCTGACCGA 61.504 57.895 15.82 0.00 0.00 4.69
2135 2527 2.710724 AAACGCCCAGTCTGACCGAC 62.711 60.000 15.82 0.00 43.17 4.79
2136 2528 3.680786 CGCCCAGTCTGACCGACA 61.681 66.667 3.76 0.00 45.32 4.35
2137 2529 2.741092 GCCCAGTCTGACCGACAA 59.259 61.111 3.76 0.00 45.32 3.18
2138 2530 1.668151 GCCCAGTCTGACCGACAAC 60.668 63.158 3.76 0.00 45.32 3.32
2139 2531 1.004918 CCCAGTCTGACCGACAACC 60.005 63.158 3.76 0.00 45.32 3.77
2140 2532 1.004918 CCAGTCTGACCGACAACCC 60.005 63.158 3.76 0.00 45.32 4.11
2141 2533 1.472662 CCAGTCTGACCGACAACCCT 61.473 60.000 3.76 0.00 45.32 4.34
2142 2534 0.393077 CAGTCTGACCGACAACCCTT 59.607 55.000 3.76 0.00 45.32 3.95
2143 2535 1.616865 CAGTCTGACCGACAACCCTTA 59.383 52.381 3.76 0.00 45.32 2.69
2144 2536 1.893801 AGTCTGACCGACAACCCTTAG 59.106 52.381 3.76 0.00 45.32 2.18
2145 2537 1.891150 GTCTGACCGACAACCCTTAGA 59.109 52.381 0.00 0.00 42.37 2.10
2146 2538 1.891150 TCTGACCGACAACCCTTAGAC 59.109 52.381 0.00 0.00 0.00 2.59
2147 2539 0.971386 TGACCGACAACCCTTAGACC 59.029 55.000 0.00 0.00 0.00 3.85
2148 2540 0.248565 GACCGACAACCCTTAGACCC 59.751 60.000 0.00 0.00 0.00 4.46
2149 2541 0.472352 ACCGACAACCCTTAGACCCA 60.472 55.000 0.00 0.00 0.00 4.51
2150 2542 0.249398 CCGACAACCCTTAGACCCAG 59.751 60.000 0.00 0.00 0.00 4.45
2151 2543 0.391263 CGACAACCCTTAGACCCAGC 60.391 60.000 0.00 0.00 0.00 4.85
2152 2544 0.984995 GACAACCCTTAGACCCAGCT 59.015 55.000 0.00 0.00 0.00 4.24
2153 2545 1.351350 GACAACCCTTAGACCCAGCTT 59.649 52.381 0.00 0.00 0.00 3.74
2154 2546 2.570302 GACAACCCTTAGACCCAGCTTA 59.430 50.000 0.00 0.00 0.00 3.09
2155 2547 2.983898 ACAACCCTTAGACCCAGCTTAA 59.016 45.455 0.00 0.00 0.00 1.85
2156 2548 3.396611 ACAACCCTTAGACCCAGCTTAAA 59.603 43.478 0.00 0.00 0.00 1.52
2157 2549 4.044191 ACAACCCTTAGACCCAGCTTAAAT 59.956 41.667 0.00 0.00 0.00 1.40
2158 2550 4.948062 ACCCTTAGACCCAGCTTAAATT 57.052 40.909 0.00 0.00 0.00 1.82
2159 2551 4.600062 ACCCTTAGACCCAGCTTAAATTG 58.400 43.478 0.00 0.00 0.00 2.32
2160 2552 3.954258 CCCTTAGACCCAGCTTAAATTGG 59.046 47.826 0.00 0.00 0.00 3.16
2166 2558 2.122783 CCAGCTTAAATTGGGACGGA 57.877 50.000 0.00 0.00 0.00 4.69
2167 2559 2.654863 CCAGCTTAAATTGGGACGGAT 58.345 47.619 0.00 0.00 0.00 4.18
2168 2560 3.815809 CCAGCTTAAATTGGGACGGATA 58.184 45.455 0.00 0.00 0.00 2.59
2169 2561 4.398319 CCAGCTTAAATTGGGACGGATAT 58.602 43.478 0.00 0.00 0.00 1.63
2170 2562 5.556915 CCAGCTTAAATTGGGACGGATATA 58.443 41.667 0.00 0.00 0.00 0.86
2171 2563 5.643777 CCAGCTTAAATTGGGACGGATATAG 59.356 44.000 0.00 0.00 0.00 1.31
2172 2564 5.643777 CAGCTTAAATTGGGACGGATATAGG 59.356 44.000 0.00 0.00 0.00 2.57
2173 2565 4.395231 GCTTAAATTGGGACGGATATAGGC 59.605 45.833 0.00 0.00 0.00 3.93
2174 2566 2.762535 AATTGGGACGGATATAGGCG 57.237 50.000 0.00 0.00 0.00 5.52
2175 2567 0.249398 ATTGGGACGGATATAGGCGC 59.751 55.000 0.00 0.00 0.00 6.53
2176 2568 1.823169 TTGGGACGGATATAGGCGCC 61.823 60.000 21.89 21.89 0.00 6.53
2177 2569 1.982938 GGGACGGATATAGGCGCCT 60.983 63.158 34.85 34.85 0.00 5.52
2178 2570 1.215647 GGACGGATATAGGCGCCTG 59.784 63.158 38.98 22.94 0.00 4.85
2179 2571 1.215647 GACGGATATAGGCGCCTGG 59.784 63.158 38.98 20.97 0.00 4.45
2180 2572 2.227089 GACGGATATAGGCGCCTGGG 62.227 65.000 38.98 21.32 0.00 4.45
2181 2573 2.283529 CGGATATAGGCGCCTGGGT 61.284 63.158 38.98 25.11 0.00 4.51
2182 2574 1.296715 GGATATAGGCGCCTGGGTG 59.703 63.158 38.98 0.00 0.00 4.61
2183 2575 1.481056 GGATATAGGCGCCTGGGTGT 61.481 60.000 38.98 21.68 0.00 4.16
2184 2576 0.320771 GATATAGGCGCCTGGGTGTG 60.321 60.000 38.98 0.00 0.00 3.82
2185 2577 1.054406 ATATAGGCGCCTGGGTGTGT 61.054 55.000 38.98 12.97 0.00 3.72
2186 2578 1.682451 TATAGGCGCCTGGGTGTGTC 61.682 60.000 38.98 1.30 0.00 3.67
2190 2582 4.619227 CGCCTGGGTGTGTCCGTT 62.619 66.667 0.00 0.00 37.00 4.44
2191 2583 2.978010 GCCTGGGTGTGTCCGTTG 60.978 66.667 0.00 0.00 37.00 4.10
2192 2584 2.978010 CCTGGGTGTGTCCGTTGC 60.978 66.667 0.00 0.00 37.00 4.17
2193 2585 3.345808 CTGGGTGTGTCCGTTGCG 61.346 66.667 0.00 0.00 37.00 4.85
2194 2586 4.164087 TGGGTGTGTCCGTTGCGT 62.164 61.111 0.00 0.00 37.00 5.24
2195 2587 3.343421 GGGTGTGTCCGTTGCGTC 61.343 66.667 0.00 0.00 37.00 5.19
2196 2588 3.698463 GGTGTGTCCGTTGCGTCG 61.698 66.667 0.00 0.00 0.00 5.12
2197 2589 2.656007 GTGTGTCCGTTGCGTCGA 60.656 61.111 0.00 0.00 0.00 4.20
2198 2590 2.656007 TGTGTCCGTTGCGTCGAC 60.656 61.111 5.18 5.18 0.00 4.20
2199 2591 3.400590 GTGTCCGTTGCGTCGACC 61.401 66.667 10.58 3.43 0.00 4.79
2200 2592 4.651008 TGTCCGTTGCGTCGACCC 62.651 66.667 10.58 0.53 0.00 4.46
2220 2612 3.879885 CCCACGTTGACCCACCCA 61.880 66.667 0.00 0.00 0.00 4.51
2221 2613 2.193517 CCACGTTGACCCACCCAA 59.806 61.111 0.00 0.00 0.00 4.12
2222 2614 2.190841 CCACGTTGACCCACCCAAC 61.191 63.158 0.00 0.00 40.19 3.77
2223 2615 2.190841 CACGTTGACCCACCCAACC 61.191 63.158 0.00 0.00 40.40 3.77
2224 2616 2.193517 CGTTGACCCACCCAACCA 59.806 61.111 0.00 0.00 40.40 3.67
2225 2617 2.190841 CGTTGACCCACCCAACCAC 61.191 63.158 0.00 0.00 40.40 4.16
2226 2618 1.076632 GTTGACCCACCCAACCACA 60.077 57.895 0.00 0.00 38.28 4.17
2227 2619 1.076632 TTGACCCACCCAACCACAC 60.077 57.895 0.00 0.00 0.00 3.82
2228 2620 1.864263 TTGACCCACCCAACCACACA 61.864 55.000 0.00 0.00 0.00 3.72
2229 2621 1.152830 GACCCACCCAACCACACAT 59.847 57.895 0.00 0.00 0.00 3.21
2230 2622 0.402504 GACCCACCCAACCACACATA 59.597 55.000 0.00 0.00 0.00 2.29
2231 2623 1.005450 GACCCACCCAACCACACATAT 59.995 52.381 0.00 0.00 0.00 1.78
2232 2624 2.240160 GACCCACCCAACCACACATATA 59.760 50.000 0.00 0.00 0.00 0.86
2233 2625 2.856231 ACCCACCCAACCACACATATAT 59.144 45.455 0.00 0.00 0.00 0.86
2234 2626 3.270960 ACCCACCCAACCACACATATATT 59.729 43.478 0.00 0.00 0.00 1.28
2235 2627 4.264623 ACCCACCCAACCACACATATATTT 60.265 41.667 0.00 0.00 0.00 1.40
2236 2628 4.340950 CCCACCCAACCACACATATATTTC 59.659 45.833 0.00 0.00 0.00 2.17
2237 2629 5.200483 CCACCCAACCACACATATATTTCT 58.800 41.667 0.00 0.00 0.00 2.52
2238 2630 5.299279 CCACCCAACCACACATATATTTCTC 59.701 44.000 0.00 0.00 0.00 2.87
2239 2631 5.299279 CACCCAACCACACATATATTTCTCC 59.701 44.000 0.00 0.00 0.00 3.71
2240 2632 4.827284 CCCAACCACACATATATTTCTCCC 59.173 45.833 0.00 0.00 0.00 4.30
2241 2633 4.827284 CCAACCACACATATATTTCTCCCC 59.173 45.833 0.00 0.00 0.00 4.81
2242 2634 5.445069 CAACCACACATATATTTCTCCCCA 58.555 41.667 0.00 0.00 0.00 4.96
2243 2635 5.930209 ACCACACATATATTTCTCCCCAT 57.070 39.130 0.00 0.00 0.00 4.00
2244 2636 5.880901 ACCACACATATATTTCTCCCCATC 58.119 41.667 0.00 0.00 0.00 3.51
2245 2637 5.222130 ACCACACATATATTTCTCCCCATCC 60.222 44.000 0.00 0.00 0.00 3.51
2246 2638 4.937620 CACACATATATTTCTCCCCATCCG 59.062 45.833 0.00 0.00 0.00 4.18
2247 2639 3.941483 CACATATATTTCTCCCCATCCGC 59.059 47.826 0.00 0.00 0.00 5.54
2248 2640 3.846588 ACATATATTTCTCCCCATCCGCT 59.153 43.478 0.00 0.00 0.00 5.52
2249 2641 4.289672 ACATATATTTCTCCCCATCCGCTT 59.710 41.667 0.00 0.00 0.00 4.68
2250 2642 2.638480 TATTTCTCCCCATCCGCTTG 57.362 50.000 0.00 0.00 0.00 4.01
2251 2643 0.753111 ATTTCTCCCCATCCGCTTGC 60.753 55.000 0.00 0.00 0.00 4.01
2252 2644 2.837031 TTTCTCCCCATCCGCTTGCC 62.837 60.000 0.00 0.00 0.00 4.52
2262 2654 4.496927 CGCTTGCCGGGCCAAATC 62.497 66.667 17.97 0.00 0.00 2.17
2263 2655 4.147449 GCTTGCCGGGCCAAATCC 62.147 66.667 17.97 0.00 0.00 3.01
2264 2656 2.362889 CTTGCCGGGCCAAATCCT 60.363 61.111 17.97 0.00 0.00 3.24
2265 2657 1.077068 CTTGCCGGGCCAAATCCTA 60.077 57.895 17.97 0.00 0.00 2.94
2266 2658 1.077068 TTGCCGGGCCAAATCCTAG 60.077 57.895 17.97 0.00 0.00 3.02
2267 2659 2.907407 GCCGGGCCAAATCCTAGC 60.907 66.667 8.12 0.00 0.00 3.42
2268 2660 2.203351 CCGGGCCAAATCCTAGCC 60.203 66.667 4.39 0.00 46.37 3.93
2272 2664 3.596362 GGCCAAATCCTAGCCACTT 57.404 52.632 0.00 0.00 46.34 3.16
2273 2665 1.393603 GGCCAAATCCTAGCCACTTC 58.606 55.000 0.00 0.00 46.34 3.01
2274 2666 1.340991 GGCCAAATCCTAGCCACTTCA 60.341 52.381 0.00 0.00 46.34 3.02
2275 2667 1.745653 GCCAAATCCTAGCCACTTCAC 59.254 52.381 0.00 0.00 0.00 3.18
2276 2668 2.619074 GCCAAATCCTAGCCACTTCACT 60.619 50.000 0.00 0.00 0.00 3.41
2277 2669 3.274288 CCAAATCCTAGCCACTTCACTC 58.726 50.000 0.00 0.00 0.00 3.51
2278 2670 3.274288 CAAATCCTAGCCACTTCACTCC 58.726 50.000 0.00 0.00 0.00 3.85
2279 2671 2.254152 ATCCTAGCCACTTCACTCCA 57.746 50.000 0.00 0.00 0.00 3.86
2280 2672 2.254152 TCCTAGCCACTTCACTCCAT 57.746 50.000 0.00 0.00 0.00 3.41
2281 2673 2.551270 TCCTAGCCACTTCACTCCATT 58.449 47.619 0.00 0.00 0.00 3.16
2282 2674 2.912956 TCCTAGCCACTTCACTCCATTT 59.087 45.455 0.00 0.00 0.00 2.32
2283 2675 3.330701 TCCTAGCCACTTCACTCCATTTT 59.669 43.478 0.00 0.00 0.00 1.82
2284 2676 3.691609 CCTAGCCACTTCACTCCATTTTC 59.308 47.826 0.00 0.00 0.00 2.29
2285 2677 2.519013 AGCCACTTCACTCCATTTTCC 58.481 47.619 0.00 0.00 0.00 3.13
2286 2678 1.546029 GCCACTTCACTCCATTTTCCC 59.454 52.381 0.00 0.00 0.00 3.97
2287 2679 1.812571 CCACTTCACTCCATTTTCCCG 59.187 52.381 0.00 0.00 0.00 5.14
2288 2680 2.552155 CCACTTCACTCCATTTTCCCGA 60.552 50.000 0.00 0.00 0.00 5.14
2289 2681 2.484264 CACTTCACTCCATTTTCCCGAC 59.516 50.000 0.00 0.00 0.00 4.79
2290 2682 2.372172 ACTTCACTCCATTTTCCCGACT 59.628 45.455 0.00 0.00 0.00 4.18
2291 2683 2.762535 TCACTCCATTTTCCCGACTC 57.237 50.000 0.00 0.00 0.00 3.36
2292 2684 1.278127 TCACTCCATTTTCCCGACTCC 59.722 52.381 0.00 0.00 0.00 3.85
2293 2685 0.618981 ACTCCATTTTCCCGACTCCC 59.381 55.000 0.00 0.00 0.00 4.30
2294 2686 0.107165 CTCCATTTTCCCGACTCCCC 60.107 60.000 0.00 0.00 0.00 4.81
2295 2687 0.549169 TCCATTTTCCCGACTCCCCT 60.549 55.000 0.00 0.00 0.00 4.79
2296 2688 0.331616 CCATTTTCCCGACTCCCCTT 59.668 55.000 0.00 0.00 0.00 3.95
2297 2689 1.682087 CCATTTTCCCGACTCCCCTTC 60.682 57.143 0.00 0.00 0.00 3.46
2298 2690 1.004277 CATTTTCCCGACTCCCCTTCA 59.996 52.381 0.00 0.00 0.00 3.02
2299 2691 0.399075 TTTTCCCGACTCCCCTTCAC 59.601 55.000 0.00 0.00 0.00 3.18
2300 2692 1.486145 TTTCCCGACTCCCCTTCACC 61.486 60.000 0.00 0.00 0.00 4.02
2301 2693 2.606519 CCCGACTCCCCTTCACCA 60.607 66.667 0.00 0.00 0.00 4.17
2302 2694 2.663196 CCGACTCCCCTTCACCAC 59.337 66.667 0.00 0.00 0.00 4.16
2303 2695 2.663196 CGACTCCCCTTCACCACC 59.337 66.667 0.00 0.00 0.00 4.61
2304 2696 2.955881 CGACTCCCCTTCACCACCC 61.956 68.421 0.00 0.00 0.00 4.61
2305 2697 1.846124 GACTCCCCTTCACCACCCA 60.846 63.158 0.00 0.00 0.00 4.51
2306 2698 1.386772 ACTCCCCTTCACCACCCAA 60.387 57.895 0.00 0.00 0.00 4.12
2307 2699 1.380302 CTCCCCTTCACCACCCAAG 59.620 63.158 0.00 0.00 0.00 3.61
2308 2700 2.283173 CCCCTTCACCACCCAAGC 60.283 66.667 0.00 0.00 0.00 4.01
2309 2701 2.845345 CCCCTTCACCACCCAAGCT 61.845 63.158 0.00 0.00 0.00 3.74
2310 2702 1.303643 CCCTTCACCACCCAAGCTC 60.304 63.158 0.00 0.00 0.00 4.09
2311 2703 1.455849 CCTTCACCACCCAAGCTCA 59.544 57.895 0.00 0.00 0.00 4.26
2312 2704 0.890996 CCTTCACCACCCAAGCTCAC 60.891 60.000 0.00 0.00 0.00 3.51
2313 2705 0.890996 CTTCACCACCCAAGCTCACC 60.891 60.000 0.00 0.00 0.00 4.02
2314 2706 1.352622 TTCACCACCCAAGCTCACCT 61.353 55.000 0.00 0.00 0.00 4.00
2315 2707 1.302832 CACCACCCAAGCTCACCTC 60.303 63.158 0.00 0.00 0.00 3.85
2316 2708 2.352805 CCACCCAAGCTCACCTCC 59.647 66.667 0.00 0.00 0.00 4.30
2317 2709 2.046892 CACCCAAGCTCACCTCCG 60.047 66.667 0.00 0.00 0.00 4.63
2318 2710 3.322466 ACCCAAGCTCACCTCCGG 61.322 66.667 0.00 0.00 0.00 5.14
2319 2711 3.322466 CCCAAGCTCACCTCCGGT 61.322 66.667 0.00 0.00 35.62 5.28
2333 2725 2.102357 CGGTGATCTCCGTCCGTG 59.898 66.667 24.59 0.00 44.77 4.94
2334 2726 2.697761 CGGTGATCTCCGTCCGTGT 61.698 63.158 24.59 0.00 44.77 4.49
2335 2727 1.139095 GGTGATCTCCGTCCGTGTC 59.861 63.158 0.00 0.00 0.00 3.67
2336 2728 1.139095 GTGATCTCCGTCCGTGTCC 59.861 63.158 0.00 0.00 0.00 4.02
2337 2729 2.404186 TGATCTCCGTCCGTGTCCG 61.404 63.158 0.00 0.00 0.00 4.79
2360 2752 2.583593 GCGGACAGCGGATCTGAC 60.584 66.667 5.48 0.00 45.72 3.51
2361 2753 3.069980 GCGGACAGCGGATCTGACT 62.070 63.158 5.48 0.00 45.72 3.41
2362 2754 1.513158 CGGACAGCGGATCTGACTT 59.487 57.895 5.48 0.00 45.72 3.01
2363 2755 0.526524 CGGACAGCGGATCTGACTTC 60.527 60.000 5.48 0.00 45.72 3.01
2364 2756 0.526524 GGACAGCGGATCTGACTTCG 60.527 60.000 5.48 0.00 45.72 3.79
2365 2757 0.452184 GACAGCGGATCTGACTTCGA 59.548 55.000 5.48 0.00 45.72 3.71
2366 2758 0.171455 ACAGCGGATCTGACTTCGAC 59.829 55.000 5.48 0.00 45.72 4.20
2367 2759 0.526524 CAGCGGATCTGACTTCGACC 60.527 60.000 5.48 0.00 45.72 4.79
2368 2760 0.965866 AGCGGATCTGACTTCGACCA 60.966 55.000 5.48 0.00 0.00 4.02
2369 2761 0.526524 GCGGATCTGACTTCGACCAG 60.527 60.000 5.48 0.00 0.00 4.00
2370 2762 0.811915 CGGATCTGACTTCGACCAGT 59.188 55.000 0.00 0.00 0.00 4.00
2371 2763 1.202200 CGGATCTGACTTCGACCAGTC 60.202 57.143 9.84 9.84 43.23 3.51
2372 2764 1.135333 GGATCTGACTTCGACCAGTCC 59.865 57.143 13.38 11.97 42.39 3.85
2373 2765 0.811915 ATCTGACTTCGACCAGTCCG 59.188 55.000 13.38 8.23 42.39 4.79
2374 2766 1.213013 CTGACTTCGACCAGTCCGG 59.787 63.158 13.38 0.00 42.39 5.14
2375 2767 1.228337 TGACTTCGACCAGTCCGGA 60.228 57.895 13.38 0.00 42.39 5.14
2376 2768 0.611062 TGACTTCGACCAGTCCGGAT 60.611 55.000 7.81 0.00 42.39 4.18
2377 2769 0.100861 GACTTCGACCAGTCCGGATC 59.899 60.000 7.81 0.00 37.78 3.36
2378 2770 1.321074 ACTTCGACCAGTCCGGATCC 61.321 60.000 7.81 0.00 38.63 3.36
2379 2771 2.337749 CTTCGACCAGTCCGGATCCG 62.338 65.000 27.65 27.65 38.63 4.18
2380 2772 3.138798 CGACCAGTCCGGATCCGT 61.139 66.667 31.22 13.04 38.63 4.69
2381 2773 2.806237 GACCAGTCCGGATCCGTC 59.194 66.667 31.22 22.78 38.63 4.79
2382 2774 3.122250 GACCAGTCCGGATCCGTCG 62.122 68.421 31.22 17.96 38.63 5.12
2383 2775 2.827190 CCAGTCCGGATCCGTCGA 60.827 66.667 31.22 20.00 36.56 4.20
2384 2776 2.408022 CAGTCCGGATCCGTCGAC 59.592 66.667 31.22 28.70 37.81 4.20
2385 2777 2.113433 CAGTCCGGATCCGTCGACT 61.113 63.158 29.49 29.49 39.97 4.18
2386 2778 0.812811 CAGTCCGGATCCGTCGACTA 60.813 60.000 32.36 12.32 38.31 2.59
2387 2779 0.532417 AGTCCGGATCCGTCGACTAG 60.532 60.000 32.12 18.01 38.49 2.57
2388 2780 1.227764 TCCGGATCCGTCGACTAGG 60.228 63.158 31.22 14.29 37.81 3.02
2389 2781 2.259439 CCGGATCCGTCGACTAGGG 61.259 68.421 31.22 10.00 37.81 3.53
2390 2782 1.525535 CGGATCCGTCGACTAGGGT 60.526 63.158 26.35 4.24 34.56 4.34
2391 2783 1.783031 CGGATCCGTCGACTAGGGTG 61.783 65.000 26.35 0.00 34.56 4.61
2392 2784 0.750911 GGATCCGTCGACTAGGGTGT 60.751 60.000 14.70 1.61 34.56 4.16
2393 2785 0.662085 GATCCGTCGACTAGGGTGTC 59.338 60.000 14.70 7.08 34.56 3.67
2394 2786 0.034767 ATCCGTCGACTAGGGTGTCA 60.035 55.000 14.70 0.00 36.82 3.58
2395 2787 0.034767 TCCGTCGACTAGGGTGTCAT 60.035 55.000 14.70 0.00 36.82 3.06
2396 2788 0.381089 CCGTCGACTAGGGTGTCATC 59.619 60.000 14.70 0.00 36.82 2.92
2397 2789 0.381089 CGTCGACTAGGGTGTCATCC 59.619 60.000 14.70 0.00 36.82 3.51
2398 2790 1.765230 GTCGACTAGGGTGTCATCCT 58.235 55.000 10.22 10.22 36.82 3.24
2399 2791 1.405821 GTCGACTAGGGTGTCATCCTG 59.594 57.143 15.47 7.40 36.82 3.86
2400 2792 1.005569 TCGACTAGGGTGTCATCCTGT 59.994 52.381 15.47 10.55 36.82 4.00
2401 2793 1.135139 CGACTAGGGTGTCATCCTGTG 59.865 57.143 15.47 9.83 36.82 3.66
2402 2794 0.905357 ACTAGGGTGTCATCCTGTGC 59.095 55.000 15.47 0.00 35.92 4.57
2403 2795 0.904649 CTAGGGTGTCATCCTGTGCA 59.095 55.000 15.47 0.00 35.92 4.57
2404 2796 0.904649 TAGGGTGTCATCCTGTGCAG 59.095 55.000 15.47 0.00 35.92 4.41
2413 2805 3.160585 CCTGTGCAGGTTGGAGGA 58.839 61.111 9.96 0.00 43.61 3.71
2414 2806 1.002868 CCTGTGCAGGTTGGAGGAG 60.003 63.158 9.96 0.00 43.61 3.69
2415 2807 1.002868 CTGTGCAGGTTGGAGGAGG 60.003 63.158 0.00 0.00 0.00 4.30
2416 2808 2.360475 GTGCAGGTTGGAGGAGGC 60.360 66.667 0.00 0.00 0.00 4.70
2417 2809 2.853542 TGCAGGTTGGAGGAGGCA 60.854 61.111 0.00 0.00 0.00 4.75
2418 2810 2.436109 GCAGGTTGGAGGAGGCAA 59.564 61.111 0.00 0.00 0.00 4.52
2419 2811 1.000396 GCAGGTTGGAGGAGGCAAT 60.000 57.895 0.00 0.00 0.00 3.56
2420 2812 1.318158 GCAGGTTGGAGGAGGCAATG 61.318 60.000 0.00 0.00 0.00 2.82
2421 2813 0.682209 CAGGTTGGAGGAGGCAATGG 60.682 60.000 0.00 0.00 0.00 3.16
2422 2814 2.054453 GGTTGGAGGAGGCAATGGC 61.054 63.158 0.00 0.00 40.13 4.40
2432 2824 3.825611 GCAATGGCCGTCCGCATT 61.826 61.111 13.16 0.00 40.31 3.56
2433 2825 2.102749 CAATGGCCGTCCGCATTG 59.897 61.111 0.00 0.00 40.31 2.82
2434 2826 3.825611 AATGGCCGTCCGCATTGC 61.826 61.111 0.00 0.00 40.31 3.56
2438 2830 4.166011 GCCGTCCGCATTGCACTC 62.166 66.667 9.69 0.00 37.47 3.51
2439 2831 3.499737 CCGTCCGCATTGCACTCC 61.500 66.667 9.69 0.00 0.00 3.85
2440 2832 3.853330 CGTCCGCATTGCACTCCG 61.853 66.667 9.69 1.28 0.00 4.63
2441 2833 2.434185 GTCCGCATTGCACTCCGA 60.434 61.111 9.69 0.00 0.00 4.55
2442 2834 2.434185 TCCGCATTGCACTCCGAC 60.434 61.111 9.69 0.00 0.00 4.79
2443 2835 3.853330 CCGCATTGCACTCCGACG 61.853 66.667 9.69 0.00 0.00 5.12
2444 2836 2.809174 CGCATTGCACTCCGACGA 60.809 61.111 9.69 0.00 0.00 4.20
2445 2837 2.167219 CGCATTGCACTCCGACGAT 61.167 57.895 9.69 0.00 0.00 3.73
2446 2838 1.695893 CGCATTGCACTCCGACGATT 61.696 55.000 9.69 0.00 0.00 3.34
2447 2839 0.026803 GCATTGCACTCCGACGATTC 59.973 55.000 3.15 0.00 0.00 2.52
2448 2840 0.652592 CATTGCACTCCGACGATTCC 59.347 55.000 0.00 0.00 0.00 3.01
2449 2841 0.806102 ATTGCACTCCGACGATTCCG 60.806 55.000 0.00 0.00 42.50 4.30
2451 2843 2.104331 CACTCCGACGATTCCGGG 59.896 66.667 0.00 0.00 46.47 5.73
2452 2844 2.044650 ACTCCGACGATTCCGGGA 60.045 61.111 0.00 0.00 46.47 5.14
2453 2845 2.119655 ACTCCGACGATTCCGGGAG 61.120 63.158 0.00 4.47 46.47 4.30
2466 2858 4.083862 GGGAGGACAGTGCCCGAC 62.084 72.222 0.00 0.00 31.06 4.79
2467 2859 4.083862 GGAGGACAGTGCCCGACC 62.084 72.222 0.00 0.00 0.00 4.79
2468 2860 4.436998 GAGGACAGTGCCCGACCG 62.437 72.222 0.00 0.00 0.00 4.79
2469 2861 4.988716 AGGACAGTGCCCGACCGA 62.989 66.667 0.00 0.00 0.00 4.69
2470 2862 4.736896 GGACAGTGCCCGACCGAC 62.737 72.222 0.00 0.00 0.00 4.79
2480 2872 3.039988 CGACCGACGGCAGGATAT 58.960 61.111 15.39 0.00 38.46 1.63
2481 2873 1.371758 CGACCGACGGCAGGATATG 60.372 63.158 15.39 0.00 38.46 1.78
2490 2882 2.666190 CAGGATATGCCCGGCGTG 60.666 66.667 14.84 0.00 37.37 5.34
2491 2883 2.842462 AGGATATGCCCGGCGTGA 60.842 61.111 14.84 0.00 37.37 4.35
2492 2884 2.665185 GGATATGCCCGGCGTGAC 60.665 66.667 14.84 7.73 0.00 3.67
2493 2885 2.421739 GATATGCCCGGCGTGACT 59.578 61.111 14.84 0.00 0.00 3.41
2494 2886 1.664965 GATATGCCCGGCGTGACTC 60.665 63.158 14.84 4.83 0.00 3.36
2495 2887 3.165160 ATATGCCCGGCGTGACTCC 62.165 63.158 14.84 0.00 0.00 3.85
2498 2890 3.845259 GCCCGGCGTGACTCCATA 61.845 66.667 6.01 0.00 0.00 2.74
2499 2891 2.417516 CCCGGCGTGACTCCATAG 59.582 66.667 6.01 0.00 0.00 2.23
2500 2892 2.279517 CCGGCGTGACTCCATAGC 60.280 66.667 6.01 0.00 0.00 2.97
2501 2893 2.655364 CGGCGTGACTCCATAGCG 60.655 66.667 0.00 0.00 32.22 4.26
2502 2894 2.494918 GGCGTGACTCCATAGCGT 59.505 61.111 0.00 0.00 32.22 5.07
2503 2895 1.589196 GGCGTGACTCCATAGCGTC 60.589 63.158 0.00 0.00 32.22 5.19
2504 2896 1.589196 GCGTGACTCCATAGCGTCC 60.589 63.158 0.00 0.00 0.00 4.79
2505 2897 1.298413 CGTGACTCCATAGCGTCCG 60.298 63.158 0.00 0.00 0.00 4.79
2506 2898 1.589196 GTGACTCCATAGCGTCCGC 60.589 63.158 2.94 2.94 42.33 5.54
2522 2914 4.838152 GCTCAATGGGCGCTCGGA 62.838 66.667 7.64 0.91 0.00 4.55
2523 2915 2.109799 CTCAATGGGCGCTCGGAT 59.890 61.111 7.64 0.00 0.00 4.18
2524 2916 1.958205 CTCAATGGGCGCTCGGATC 60.958 63.158 7.64 0.00 0.00 3.36
2525 2917 2.974698 CAATGGGCGCTCGGATCC 60.975 66.667 7.64 0.00 0.00 3.36
2526 2918 4.256180 AATGGGCGCTCGGATCCC 62.256 66.667 7.64 0.00 40.47 3.85
2531 2923 4.292178 GCGCTCGGATCCCTCCAG 62.292 72.222 6.06 0.00 42.19 3.86
2532 2924 3.610669 CGCTCGGATCCCTCCAGG 61.611 72.222 6.06 0.00 42.19 4.45
2547 2939 3.341263 CAGGGCTGGATCATCATGG 57.659 57.895 0.00 0.00 0.00 3.66
2548 2940 0.477204 CAGGGCTGGATCATCATGGT 59.523 55.000 0.00 0.00 0.00 3.55
2549 2941 0.769873 AGGGCTGGATCATCATGGTC 59.230 55.000 0.00 0.00 0.00 4.02
2556 2948 3.069079 GGATCATCATGGTCCCTGATG 57.931 52.381 24.11 24.11 41.85 3.07
2557 2949 2.374504 GGATCATCATGGTCCCTGATGT 59.625 50.000 26.98 18.35 41.85 3.06
2558 2950 3.409570 GATCATCATGGTCCCTGATGTG 58.590 50.000 26.98 12.32 46.51 3.21
2559 2951 2.480390 TCATCATGGTCCCTGATGTGA 58.520 47.619 26.98 14.06 46.51 3.58
2560 2952 3.050835 TCATCATGGTCCCTGATGTGAT 58.949 45.455 26.98 8.41 46.51 3.06
2561 2953 3.072038 TCATCATGGTCCCTGATGTGATC 59.928 47.826 26.98 0.00 46.51 2.92
2562 2954 2.480390 TCATGGTCCCTGATGTGATCA 58.520 47.619 0.00 0.00 37.76 2.92
2563 2955 2.171237 TCATGGTCCCTGATGTGATCAC 59.829 50.000 19.27 19.27 35.06 3.06
2564 2956 0.911769 TGGTCCCTGATGTGATCACC 59.088 55.000 22.85 9.16 35.06 4.02
2565 2957 1.207791 GGTCCCTGATGTGATCACCT 58.792 55.000 22.85 13.58 35.06 4.00
2566 2958 2.292851 TGGTCCCTGATGTGATCACCTA 60.293 50.000 22.85 5.83 35.06 3.08
2567 2959 2.103263 GGTCCCTGATGTGATCACCTAC 59.897 54.545 22.85 13.84 35.06 3.18
2568 2960 3.034635 GTCCCTGATGTGATCACCTACT 58.965 50.000 22.85 5.28 35.06 2.57
2569 2961 4.215908 GTCCCTGATGTGATCACCTACTA 58.784 47.826 22.85 4.25 35.06 1.82
2570 2962 4.835615 GTCCCTGATGTGATCACCTACTAT 59.164 45.833 22.85 9.28 35.06 2.12
2571 2963 6.010850 GTCCCTGATGTGATCACCTACTATA 58.989 44.000 22.85 2.70 35.06 1.31
2572 2964 6.151985 GTCCCTGATGTGATCACCTACTATAG 59.848 46.154 22.85 10.81 35.06 1.31
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 321 2.178235 GCCGCCTAAAACCTAGCCG 61.178 63.158 0.00 0.00 0.00 5.52
52 325 2.585698 CCCGCCGCCTAAAACCTA 59.414 61.111 0.00 0.00 0.00 3.08
319 592 1.868251 CACGAGCTAAGCCGACGAC 60.868 63.158 0.00 0.00 0.00 4.34
320 593 2.483745 CACGAGCTAAGCCGACGA 59.516 61.111 0.00 0.00 0.00 4.20
459 732 4.143333 CACGCGTCCTGGTAGGGG 62.143 72.222 9.86 0.00 35.59 4.79
460 733 4.143333 CCACGCGTCCTGGTAGGG 62.143 72.222 9.86 0.00 35.59 3.53
461 734 3.379445 ACCACGCGTCCTGGTAGG 61.379 66.667 17.37 12.59 40.45 3.18
462 735 2.126071 CACCACGCGTCCTGGTAG 60.126 66.667 18.27 10.06 40.25 3.18
463 736 4.367023 GCACCACGCGTCCTGGTA 62.367 66.667 18.27 0.00 40.25 3.25
483 756 4.476410 GCTTAAACCGCCCGCTGC 62.476 66.667 0.00 0.00 0.00 5.25
484 757 3.810896 GGCTTAAACCGCCCGCTG 61.811 66.667 0.00 0.00 41.73 5.18
490 763 3.636282 TTTTTCTCAGGCTTAAACCGC 57.364 42.857 0.00 0.00 33.69 5.68
491 764 5.768317 TGAATTTTTCTCAGGCTTAAACCG 58.232 37.500 0.00 0.00 33.69 4.44
492 765 6.813649 GGATGAATTTTTCTCAGGCTTAAACC 59.186 38.462 0.00 0.00 0.00 3.27
493 766 6.528072 CGGATGAATTTTTCTCAGGCTTAAAC 59.472 38.462 0.00 0.00 0.00 2.01
494 767 6.208599 ACGGATGAATTTTTCTCAGGCTTAAA 59.791 34.615 0.00 0.00 0.00 1.52
495 768 5.710099 ACGGATGAATTTTTCTCAGGCTTAA 59.290 36.000 0.00 0.00 0.00 1.85
496 769 5.253330 ACGGATGAATTTTTCTCAGGCTTA 58.747 37.500 0.00 0.00 0.00 3.09
497 770 4.082125 ACGGATGAATTTTTCTCAGGCTT 58.918 39.130 0.00 0.00 0.00 4.35
498 771 3.690460 ACGGATGAATTTTTCTCAGGCT 58.310 40.909 0.00 0.00 0.00 4.58
499 772 4.440839 AACGGATGAATTTTTCTCAGGC 57.559 40.909 0.00 0.00 0.00 4.85
500 773 6.681777 AGAAAACGGATGAATTTTTCTCAGG 58.318 36.000 3.30 0.00 43.05 3.86
501 774 8.289618 TGTAGAAAACGGATGAATTTTTCTCAG 58.710 33.333 10.89 0.00 43.05 3.35
502 775 8.160521 TGTAGAAAACGGATGAATTTTTCTCA 57.839 30.769 10.89 7.54 43.05 3.27
503 776 9.626045 ATTGTAGAAAACGGATGAATTTTTCTC 57.374 29.630 10.89 5.61 43.05 2.87
504 777 9.626045 GATTGTAGAAAACGGATGAATTTTTCT 57.374 29.630 11.95 11.95 46.40 2.52
505 778 9.626045 AGATTGTAGAAAACGGATGAATTTTTC 57.374 29.630 0.00 0.00 38.82 2.29
510 783 8.388103 CGTTTAGATTGTAGAAAACGGATGAAT 58.612 33.333 10.42 0.00 46.25 2.57
511 784 7.735500 CGTTTAGATTGTAGAAAACGGATGAA 58.264 34.615 10.42 0.00 46.25 2.57
512 785 7.285783 CGTTTAGATTGTAGAAAACGGATGA 57.714 36.000 10.42 0.00 46.25 2.92
533 806 8.022550 CCCTTTGTAAACGAATATAAAACCGTT 58.977 33.333 0.00 0.00 45.56 4.44
534 807 7.529158 CCCTTTGTAAACGAATATAAAACCGT 58.471 34.615 0.00 0.00 36.77 4.83
535 808 6.469915 GCCCTTTGTAAACGAATATAAAACCG 59.530 38.462 0.00 0.00 0.00 4.44
536 809 7.541162 AGCCCTTTGTAAACGAATATAAAACC 58.459 34.615 0.00 0.00 0.00 3.27
537 810 9.712359 CTAGCCCTTTGTAAACGAATATAAAAC 57.288 33.333 0.00 0.00 0.00 2.43
538 811 8.895737 CCTAGCCCTTTGTAAACGAATATAAAA 58.104 33.333 0.00 0.00 0.00 1.52
539 812 8.266473 TCCTAGCCCTTTGTAAACGAATATAAA 58.734 33.333 0.00 0.00 0.00 1.40
540 813 7.712205 GTCCTAGCCCTTTGTAAACGAATATAA 59.288 37.037 0.00 0.00 0.00 0.98
541 814 7.070322 AGTCCTAGCCCTTTGTAAACGAATATA 59.930 37.037 0.00 0.00 0.00 0.86
542 815 6.053650 GTCCTAGCCCTTTGTAAACGAATAT 58.946 40.000 0.00 0.00 0.00 1.28
543 816 5.188359 AGTCCTAGCCCTTTGTAAACGAATA 59.812 40.000 0.00 0.00 0.00 1.75
544 817 4.019591 AGTCCTAGCCCTTTGTAAACGAAT 60.020 41.667 0.00 0.00 0.00 3.34
545 818 3.325716 AGTCCTAGCCCTTTGTAAACGAA 59.674 43.478 0.00 0.00 0.00 3.85
546 819 2.901839 AGTCCTAGCCCTTTGTAAACGA 59.098 45.455 0.00 0.00 0.00 3.85
547 820 3.329929 AGTCCTAGCCCTTTGTAAACG 57.670 47.619 0.00 0.00 0.00 3.60
548 821 5.417754 AGTAGTCCTAGCCCTTTGTAAAC 57.582 43.478 0.00 0.00 0.00 2.01
549 822 6.259123 ACTAGTAGTCCTAGCCCTTTGTAAA 58.741 40.000 0.00 0.00 46.10 2.01
550 823 5.835582 ACTAGTAGTCCTAGCCCTTTGTAA 58.164 41.667 0.00 0.00 46.10 2.41
551 824 5.463051 ACTAGTAGTCCTAGCCCTTTGTA 57.537 43.478 0.00 0.00 46.10 2.41
552 825 4.334208 ACTAGTAGTCCTAGCCCTTTGT 57.666 45.455 0.00 0.00 46.10 2.83
553 826 4.680975 GCAACTAGTAGTCCTAGCCCTTTG 60.681 50.000 2.58 0.00 46.10 2.77
554 827 3.451540 GCAACTAGTAGTCCTAGCCCTTT 59.548 47.826 2.58 0.00 46.10 3.11
555 828 3.032459 GCAACTAGTAGTCCTAGCCCTT 58.968 50.000 2.58 0.00 46.10 3.95
556 829 2.668625 GCAACTAGTAGTCCTAGCCCT 58.331 52.381 2.58 0.00 46.10 5.19
557 830 1.687660 GGCAACTAGTAGTCCTAGCCC 59.312 57.143 18.21 5.44 46.10 5.19
558 831 2.385803 TGGCAACTAGTAGTCCTAGCC 58.614 52.381 20.49 20.49 46.10 3.93
559 832 3.734293 CGTTGGCAACTAGTAGTCCTAGC 60.734 52.174 26.26 5.94 46.10 3.42
561 834 2.756760 CCGTTGGCAACTAGTAGTCCTA 59.243 50.000 26.26 0.00 37.61 2.94
562 835 1.549170 CCGTTGGCAACTAGTAGTCCT 59.451 52.381 26.26 0.00 37.61 3.85
563 836 1.405121 CCCGTTGGCAACTAGTAGTCC 60.405 57.143 26.26 2.12 37.61 3.85
564 837 1.547372 TCCCGTTGGCAACTAGTAGTC 59.453 52.381 26.26 0.00 37.61 2.59
565 838 1.636148 TCCCGTTGGCAACTAGTAGT 58.364 50.000 26.26 0.00 37.61 2.73
566 839 2.754946 TTCCCGTTGGCAACTAGTAG 57.245 50.000 26.26 11.45 37.61 2.57
567 840 2.633967 TCTTTCCCGTTGGCAACTAGTA 59.366 45.455 26.26 9.78 37.61 1.82
568 841 1.418637 TCTTTCCCGTTGGCAACTAGT 59.581 47.619 26.26 0.00 37.61 2.57
572 845 2.588027 TTTTCTTTCCCGTTGGCAAC 57.412 45.000 20.27 20.27 0.00 4.17
580 853 9.587772 AGATATATATCGACATTTTCTTTCCCG 57.412 33.333 15.48 0.00 37.76 5.14
604 877 5.890424 TGTGACTACATATCGACACAAGA 57.110 39.130 0.00 0.00 35.77 3.02
619 893 8.137745 TGAATATGGCATGAGATATGTGACTA 57.862 34.615 10.98 0.00 0.00 2.59
635 909 1.230324 GCCTTCGGACTGAATATGGC 58.770 55.000 9.35 9.35 38.00 4.40
636 910 1.873903 CGGCCTTCGGACTGAATATGG 60.874 57.143 0.00 0.00 35.63 2.74
637 911 1.502231 CGGCCTTCGGACTGAATATG 58.498 55.000 0.00 0.00 35.63 1.78
659 938 2.103934 TTGTGTGCAAGCAACGCC 59.896 55.556 0.00 0.00 0.00 5.68
785 1065 0.025001 CGTTCATACCAGCTTTCGCG 59.975 55.000 0.00 0.00 42.32 5.87
830 1110 2.222027 GGCAAGAAACACACACTAGCT 58.778 47.619 0.00 0.00 0.00 3.32
910 1206 1.281867 AGAAGCAACCGAATCCATGGA 59.718 47.619 18.88 18.88 0.00 3.41
996 1296 3.511699 ACGCACTCGCATATATATGTGG 58.488 45.455 27.80 21.80 42.75 4.17
1077 1378 2.487532 GCAGCTCCCCATGTGATGC 61.488 63.158 0.00 0.00 41.85 3.91
1152 1453 1.298863 CGTCGTCGGCGTAATCCAT 60.299 57.895 11.83 0.00 39.49 3.41
1221 1522 4.233635 GCTTCATGCAGAGCGCGG 62.234 66.667 8.83 0.00 46.97 6.46
1350 1651 3.016971 ATGGGTGGCTAGCCTGCA 61.017 61.111 33.07 12.02 44.88 4.41
1394 1704 7.832769 TGCACTAGTATTATGTACACAAGTCA 58.167 34.615 0.00 0.00 0.00 3.41
1417 1729 8.694975 ATGTATGTAGAGACGAATTCATATGC 57.305 34.615 6.22 0.00 0.00 3.14
1435 1747 5.045578 AGGAGGTTTGTGAAGCTATGTATGT 60.046 40.000 0.00 0.00 43.27 2.29
1436 1748 5.295292 CAGGAGGTTTGTGAAGCTATGTATG 59.705 44.000 0.00 0.00 43.27 2.39
1438 1767 4.530553 TCAGGAGGTTTGTGAAGCTATGTA 59.469 41.667 0.00 0.00 43.27 2.29
1456 1785 3.243873 GCACATAGACGAATGGATCAGGA 60.244 47.826 0.00 0.00 0.00 3.86
1473 1802 6.257849 CCTCAATTACAACTACATACGCACAT 59.742 38.462 0.00 0.00 0.00 3.21
1477 1806 6.897259 TTCCTCAATTACAACTACATACGC 57.103 37.500 0.00 0.00 0.00 4.42
1482 1811 6.751157 TCGTCTTTCCTCAATTACAACTACA 58.249 36.000 0.00 0.00 0.00 2.74
1495 1831 5.393962 CACAAATCCAATTCGTCTTTCCTC 58.606 41.667 0.00 0.00 0.00 3.71
1520 1856 6.315144 TGATCCAACCGAGTATGTAATTTGTG 59.685 38.462 0.00 0.00 0.00 3.33
1524 1860 5.926542 CGATGATCCAACCGAGTATGTAATT 59.073 40.000 0.00 0.00 0.00 1.40
1533 1869 0.863799 CATGCGATGATCCAACCGAG 59.136 55.000 0.00 0.00 0.00 4.63
1561 1897 4.215399 TGTTCTTGGATCGCAAGTTAAAGG 59.785 41.667 17.92 0.00 39.48 3.11
1566 1902 4.499696 CCTTTTGTTCTTGGATCGCAAGTT 60.500 41.667 17.92 0.00 39.48 2.66
1579 1917 0.598065 GATGGTGCGCCTTTTGTTCT 59.402 50.000 18.96 0.00 35.27 3.01
1581 1919 1.285641 CGATGGTGCGCCTTTTGTT 59.714 52.632 18.96 0.00 35.27 2.83
1684 2052 2.437085 TAGAATGGGTGAGAGAGCGA 57.563 50.000 0.00 0.00 0.00 4.93
1707 2079 1.535462 CCAAGAACGCCAAAGATTCGT 59.465 47.619 0.00 0.00 38.15 3.85
1734 2106 1.026182 ATGCATGCACCTACCACACG 61.026 55.000 25.37 0.00 0.00 4.49
1845 2233 7.063780 CCGAAACTAACCTGTTAACGACATATT 59.936 37.037 0.26 0.00 37.69 1.28
1846 2234 6.532657 CCGAAACTAACCTGTTAACGACATAT 59.467 38.462 0.26 0.00 37.69 1.78
1953 2345 2.765807 CCGGGGGCAGATGAGACT 60.766 66.667 0.00 0.00 0.00 3.24
2010 2402 1.137086 GCTGGATCGGAGTTTAGAGCA 59.863 52.381 0.00 0.00 0.00 4.26
2038 2430 2.030958 GGTCACCCGGCTGTAAACG 61.031 63.158 0.00 0.00 0.00 3.60
2039 2431 1.673337 GGGTCACCCGGCTGTAAAC 60.673 63.158 0.00 0.00 32.13 2.01
2040 2432 2.751688 GGGTCACCCGGCTGTAAA 59.248 61.111 0.00 0.00 32.13 2.01
2049 2441 1.896122 AAGACGGATTCGGGTCACCC 61.896 60.000 1.06 1.06 41.39 4.61
2050 2442 0.819582 TAAGACGGATTCGGGTCACC 59.180 55.000 0.00 0.00 41.39 4.02
2051 2443 2.660189 TTAAGACGGATTCGGGTCAC 57.340 50.000 0.00 0.00 41.39 3.67
2052 2444 2.299582 TGTTTAAGACGGATTCGGGTCA 59.700 45.455 0.00 0.00 41.39 4.02
2053 2445 2.669924 GTGTTTAAGACGGATTCGGGTC 59.330 50.000 0.00 0.00 41.39 4.46
2054 2446 2.691927 GTGTTTAAGACGGATTCGGGT 58.308 47.619 0.00 0.00 41.39 5.28
2055 2447 1.657094 CGTGTTTAAGACGGATTCGGG 59.343 52.381 6.75 0.00 41.39 5.14
2063 2455 2.056577 GACTGGACCGTGTTTAAGACG 58.943 52.381 7.68 7.68 36.56 4.18
2064 2456 3.102052 TGACTGGACCGTGTTTAAGAC 57.898 47.619 0.00 0.00 0.00 3.01
2065 2457 3.823281 TTGACTGGACCGTGTTTAAGA 57.177 42.857 0.00 0.00 0.00 2.10
2066 2458 4.886247 TTTTGACTGGACCGTGTTTAAG 57.114 40.909 0.00 0.00 0.00 1.85
2092 2484 2.621526 GGTGTCCGTCTGGTTGATTTTT 59.378 45.455 0.00 0.00 36.30 1.94
2093 2485 2.158667 AGGTGTCCGTCTGGTTGATTTT 60.159 45.455 0.00 0.00 36.30 1.82
2094 2486 1.420138 AGGTGTCCGTCTGGTTGATTT 59.580 47.619 0.00 0.00 36.30 2.17
2095 2487 1.002087 GAGGTGTCCGTCTGGTTGATT 59.998 52.381 0.00 0.00 36.30 2.57
2096 2488 0.608640 GAGGTGTCCGTCTGGTTGAT 59.391 55.000 0.00 0.00 36.30 2.57
2097 2489 0.757561 TGAGGTGTCCGTCTGGTTGA 60.758 55.000 0.00 0.00 36.30 3.18
2098 2490 0.105964 TTGAGGTGTCCGTCTGGTTG 59.894 55.000 0.00 0.00 36.30 3.77
2099 2491 0.834612 TTTGAGGTGTCCGTCTGGTT 59.165 50.000 0.00 0.00 36.30 3.67
2100 2492 0.106149 GTTTGAGGTGTCCGTCTGGT 59.894 55.000 0.00 0.00 36.30 4.00
2101 2493 0.944311 CGTTTGAGGTGTCCGTCTGG 60.944 60.000 0.00 0.00 0.00 3.86
2102 2494 1.557443 GCGTTTGAGGTGTCCGTCTG 61.557 60.000 0.00 0.00 0.00 3.51
2103 2495 1.300697 GCGTTTGAGGTGTCCGTCT 60.301 57.895 0.00 0.00 0.00 4.18
2104 2496 2.315386 GGCGTTTGAGGTGTCCGTC 61.315 63.158 0.00 0.00 0.00 4.79
2105 2497 2.280592 GGCGTTTGAGGTGTCCGT 60.281 61.111 0.00 0.00 0.00 4.69
2106 2498 3.047877 GGGCGTTTGAGGTGTCCG 61.048 66.667 0.00 0.00 0.00 4.79
2107 2499 1.966451 CTGGGCGTTTGAGGTGTCC 60.966 63.158 0.00 0.00 0.00 4.02
2108 2500 1.227853 ACTGGGCGTTTGAGGTGTC 60.228 57.895 0.00 0.00 0.00 3.67
2109 2501 1.227853 GACTGGGCGTTTGAGGTGT 60.228 57.895 0.00 0.00 0.00 4.16
2110 2502 1.071471 AGACTGGGCGTTTGAGGTG 59.929 57.895 0.00 0.00 0.00 4.00
2111 2503 1.071471 CAGACTGGGCGTTTGAGGT 59.929 57.895 0.00 0.00 29.58 3.85
2112 2504 0.951040 GTCAGACTGGGCGTTTGAGG 60.951 60.000 1.81 0.00 37.41 3.86
2113 2505 0.951040 GGTCAGACTGGGCGTTTGAG 60.951 60.000 1.81 0.00 37.41 3.02
2114 2506 1.070786 GGTCAGACTGGGCGTTTGA 59.929 57.895 1.81 0.00 34.68 2.69
2115 2507 2.317609 CGGTCAGACTGGGCGTTTG 61.318 63.158 1.81 0.00 0.00 2.93
2116 2508 2.030562 CGGTCAGACTGGGCGTTT 59.969 61.111 1.81 0.00 0.00 3.60
2117 2509 2.915659 TCGGTCAGACTGGGCGTT 60.916 61.111 9.65 0.00 0.00 4.84
2118 2510 3.681835 GTCGGTCAGACTGGGCGT 61.682 66.667 9.65 0.00 46.13 5.68
2126 2518 1.891150 GTCTAAGGGTTGTCGGTCAGA 59.109 52.381 0.00 0.00 0.00 3.27
2127 2519 1.067071 GGTCTAAGGGTTGTCGGTCAG 60.067 57.143 0.00 0.00 0.00 3.51
2128 2520 0.971386 GGTCTAAGGGTTGTCGGTCA 59.029 55.000 0.00 0.00 0.00 4.02
2129 2521 0.248565 GGGTCTAAGGGTTGTCGGTC 59.751 60.000 0.00 0.00 0.00 4.79
2130 2522 0.472352 TGGGTCTAAGGGTTGTCGGT 60.472 55.000 0.00 0.00 0.00 4.69
2131 2523 0.249398 CTGGGTCTAAGGGTTGTCGG 59.751 60.000 0.00 0.00 0.00 4.79
2132 2524 0.391263 GCTGGGTCTAAGGGTTGTCG 60.391 60.000 0.00 0.00 0.00 4.35
2133 2525 0.984995 AGCTGGGTCTAAGGGTTGTC 59.015 55.000 0.00 0.00 0.00 3.18
2134 2526 1.446016 AAGCTGGGTCTAAGGGTTGT 58.554 50.000 0.00 0.00 0.00 3.32
2135 2527 3.713826 TTAAGCTGGGTCTAAGGGTTG 57.286 47.619 0.00 0.00 0.00 3.77
2136 2528 4.948062 ATTTAAGCTGGGTCTAAGGGTT 57.052 40.909 0.00 0.00 0.00 4.11
2137 2529 4.569865 CCAATTTAAGCTGGGTCTAAGGGT 60.570 45.833 0.00 0.00 0.00 4.34
2138 2530 3.954258 CCAATTTAAGCTGGGTCTAAGGG 59.046 47.826 0.00 0.00 0.00 3.95
2139 2531 3.954258 CCCAATTTAAGCTGGGTCTAAGG 59.046 47.826 13.49 0.00 46.37 2.69
2147 2539 2.122783 TCCGTCCCAATTTAAGCTGG 57.877 50.000 0.00 0.00 0.00 4.85
2148 2540 5.643777 CCTATATCCGTCCCAATTTAAGCTG 59.356 44.000 0.00 0.00 0.00 4.24
2149 2541 5.803470 GCCTATATCCGTCCCAATTTAAGCT 60.803 44.000 0.00 0.00 0.00 3.74
2150 2542 4.395231 GCCTATATCCGTCCCAATTTAAGC 59.605 45.833 0.00 0.00 0.00 3.09
2151 2543 4.630069 CGCCTATATCCGTCCCAATTTAAG 59.370 45.833 0.00 0.00 0.00 1.85
2152 2544 4.571919 CGCCTATATCCGTCCCAATTTAA 58.428 43.478 0.00 0.00 0.00 1.52
2153 2545 3.618019 GCGCCTATATCCGTCCCAATTTA 60.618 47.826 0.00 0.00 0.00 1.40
2154 2546 2.874457 GCGCCTATATCCGTCCCAATTT 60.874 50.000 0.00 0.00 0.00 1.82
2155 2547 1.338769 GCGCCTATATCCGTCCCAATT 60.339 52.381 0.00 0.00 0.00 2.32
2156 2548 0.249398 GCGCCTATATCCGTCCCAAT 59.751 55.000 0.00 0.00 0.00 3.16
2157 2549 1.669440 GCGCCTATATCCGTCCCAA 59.331 57.895 0.00 0.00 0.00 4.12
2158 2550 2.280552 GGCGCCTATATCCGTCCCA 61.281 63.158 22.15 0.00 0.00 4.37
2159 2551 1.982938 AGGCGCCTATATCCGTCCC 60.983 63.158 31.86 0.00 0.00 4.46
2160 2552 1.215647 CAGGCGCCTATATCCGTCC 59.784 63.158 32.30 0.00 0.00 4.79
2161 2553 1.215647 CCAGGCGCCTATATCCGTC 59.784 63.158 32.30 0.00 0.00 4.79
2162 2554 2.283529 CCCAGGCGCCTATATCCGT 61.284 63.158 32.30 0.19 0.00 4.69
2163 2555 2.283529 ACCCAGGCGCCTATATCCG 61.284 63.158 32.30 16.03 0.00 4.18
2164 2556 1.296715 CACCCAGGCGCCTATATCC 59.703 63.158 32.30 0.00 0.00 2.59
2165 2557 0.320771 CACACCCAGGCGCCTATATC 60.321 60.000 32.30 0.00 0.00 1.63
2166 2558 1.054406 ACACACCCAGGCGCCTATAT 61.054 55.000 32.30 14.68 0.00 0.86
2167 2559 1.682451 GACACACCCAGGCGCCTATA 61.682 60.000 32.30 0.00 0.00 1.31
2168 2560 3.009115 ACACACCCAGGCGCCTAT 61.009 61.111 32.30 15.52 0.00 2.57
2169 2561 3.702048 GACACACCCAGGCGCCTA 61.702 66.667 32.30 0.00 0.00 3.93
2173 2565 4.619227 AACGGACACACCCAGGCG 62.619 66.667 0.00 0.00 34.64 5.52
2174 2566 2.978010 CAACGGACACACCCAGGC 60.978 66.667 0.00 0.00 34.64 4.85
2175 2567 2.978010 GCAACGGACACACCCAGG 60.978 66.667 0.00 0.00 34.64 4.45
2176 2568 3.345808 CGCAACGGACACACCCAG 61.346 66.667 0.00 0.00 34.64 4.45
2177 2569 4.164087 ACGCAACGGACACACCCA 62.164 61.111 0.00 0.00 34.64 4.51
2178 2570 3.343421 GACGCAACGGACACACCC 61.343 66.667 0.00 0.00 34.64 4.61
2179 2571 3.698463 CGACGCAACGGACACACC 61.698 66.667 0.00 0.00 0.00 4.16
2180 2572 2.656007 TCGACGCAACGGACACAC 60.656 61.111 0.00 0.00 0.00 3.82
2181 2573 2.656007 GTCGACGCAACGGACACA 60.656 61.111 0.00 0.00 0.00 3.72
2182 2574 3.400590 GGTCGACGCAACGGACAC 61.401 66.667 9.92 0.00 0.00 3.67
2183 2575 4.651008 GGGTCGACGCAACGGACA 62.651 66.667 25.93 0.00 0.00 4.02
2203 2595 3.423253 TTGGGTGGGTCAACGTGGG 62.423 63.158 0.00 0.00 0.00 4.61
2204 2596 2.190841 GTTGGGTGGGTCAACGTGG 61.191 63.158 0.00 0.00 35.75 4.94
2205 2597 2.190841 GGTTGGGTGGGTCAACGTG 61.191 63.158 0.00 0.00 43.75 4.49
2206 2598 2.193786 GGTTGGGTGGGTCAACGT 59.806 61.111 0.00 0.00 43.75 3.99
2207 2599 2.190841 GTGGTTGGGTGGGTCAACG 61.191 63.158 0.00 0.00 43.75 4.10
2208 2600 1.076632 TGTGGTTGGGTGGGTCAAC 60.077 57.895 0.00 0.00 42.53 3.18
2209 2601 1.076632 GTGTGGTTGGGTGGGTCAA 60.077 57.895 0.00 0.00 0.00 3.18
2210 2602 1.650242 ATGTGTGGTTGGGTGGGTCA 61.650 55.000 0.00 0.00 0.00 4.02
2211 2603 0.402504 TATGTGTGGTTGGGTGGGTC 59.597 55.000 0.00 0.00 0.00 4.46
2212 2604 1.080638 ATATGTGTGGTTGGGTGGGT 58.919 50.000 0.00 0.00 0.00 4.51
2213 2605 3.593442 ATATATGTGTGGTTGGGTGGG 57.407 47.619 0.00 0.00 0.00 4.61
2214 2606 5.200483 AGAAATATATGTGTGGTTGGGTGG 58.800 41.667 0.00 0.00 0.00 4.61
2215 2607 5.299279 GGAGAAATATATGTGTGGTTGGGTG 59.701 44.000 0.00 0.00 0.00 4.61
2216 2608 5.445964 GGAGAAATATATGTGTGGTTGGGT 58.554 41.667 0.00 0.00 0.00 4.51
2217 2609 4.827284 GGGAGAAATATATGTGTGGTTGGG 59.173 45.833 0.00 0.00 0.00 4.12
2218 2610 4.827284 GGGGAGAAATATATGTGTGGTTGG 59.173 45.833 0.00 0.00 0.00 3.77
2219 2611 5.445069 TGGGGAGAAATATATGTGTGGTTG 58.555 41.667 0.00 0.00 0.00 3.77
2220 2612 5.725551 TGGGGAGAAATATATGTGTGGTT 57.274 39.130 0.00 0.00 0.00 3.67
2221 2613 5.222130 GGATGGGGAGAAATATATGTGTGGT 60.222 44.000 0.00 0.00 0.00 4.16
2222 2614 5.256474 GGATGGGGAGAAATATATGTGTGG 58.744 45.833 0.00 0.00 0.00 4.17
2223 2615 4.937620 CGGATGGGGAGAAATATATGTGTG 59.062 45.833 0.00 0.00 0.00 3.82
2224 2616 4.565652 GCGGATGGGGAGAAATATATGTGT 60.566 45.833 0.00 0.00 0.00 3.72
2225 2617 3.941483 GCGGATGGGGAGAAATATATGTG 59.059 47.826 0.00 0.00 0.00 3.21
2226 2618 3.846588 AGCGGATGGGGAGAAATATATGT 59.153 43.478 0.00 0.00 0.00 2.29
2227 2619 4.494091 AGCGGATGGGGAGAAATATATG 57.506 45.455 0.00 0.00 0.00 1.78
2228 2620 4.848357 CAAGCGGATGGGGAGAAATATAT 58.152 43.478 0.00 0.00 0.00 0.86
2229 2621 3.559171 GCAAGCGGATGGGGAGAAATATA 60.559 47.826 0.00 0.00 0.00 0.86
2230 2622 2.815589 GCAAGCGGATGGGGAGAAATAT 60.816 50.000 0.00 0.00 0.00 1.28
2231 2623 1.476833 GCAAGCGGATGGGGAGAAATA 60.477 52.381 0.00 0.00 0.00 1.40
2232 2624 0.753111 GCAAGCGGATGGGGAGAAAT 60.753 55.000 0.00 0.00 0.00 2.17
2233 2625 1.378514 GCAAGCGGATGGGGAGAAA 60.379 57.895 0.00 0.00 0.00 2.52
2234 2626 2.272146 GCAAGCGGATGGGGAGAA 59.728 61.111 0.00 0.00 0.00 2.87
2235 2627 3.797353 GGCAAGCGGATGGGGAGA 61.797 66.667 0.00 0.00 0.00 3.71
2245 2637 4.496927 GATTTGGCCCGGCAAGCG 62.497 66.667 12.58 0.00 0.00 4.68
2246 2638 4.147449 GGATTTGGCCCGGCAAGC 62.147 66.667 12.58 0.00 0.00 4.01
2247 2639 1.077068 TAGGATTTGGCCCGGCAAG 60.077 57.895 12.58 0.00 0.00 4.01
2248 2640 1.077068 CTAGGATTTGGCCCGGCAA 60.077 57.895 12.58 3.89 0.00 4.52
2249 2641 2.595095 CTAGGATTTGGCCCGGCA 59.405 61.111 12.58 0.00 0.00 5.69
2250 2642 2.907407 GCTAGGATTTGGCCCGGC 60.907 66.667 0.00 0.00 0.00 6.13
2251 2643 2.203351 GGCTAGGATTTGGCCCGG 60.203 66.667 0.00 0.00 39.96 5.73
2252 2644 1.823899 GTGGCTAGGATTTGGCCCG 60.824 63.158 0.00 0.00 44.71 6.13
2253 2645 0.033109 AAGTGGCTAGGATTTGGCCC 60.033 55.000 0.00 0.00 44.71 5.80
2254 2646 1.340991 TGAAGTGGCTAGGATTTGGCC 60.341 52.381 0.00 0.00 45.45 5.36
2255 2647 1.745653 GTGAAGTGGCTAGGATTTGGC 59.254 52.381 0.00 0.00 0.00 4.52
2256 2648 3.274288 GAGTGAAGTGGCTAGGATTTGG 58.726 50.000 0.00 0.00 0.00 3.28
2257 2649 3.274288 GGAGTGAAGTGGCTAGGATTTG 58.726 50.000 0.00 0.00 0.00 2.32
2258 2650 2.912956 TGGAGTGAAGTGGCTAGGATTT 59.087 45.455 0.00 0.00 0.00 2.17
2259 2651 2.551270 TGGAGTGAAGTGGCTAGGATT 58.449 47.619 0.00 0.00 0.00 3.01
2260 2652 2.254152 TGGAGTGAAGTGGCTAGGAT 57.746 50.000 0.00 0.00 0.00 3.24
2261 2653 2.254152 ATGGAGTGAAGTGGCTAGGA 57.746 50.000 0.00 0.00 0.00 2.94
2262 2654 3.356529 AAATGGAGTGAAGTGGCTAGG 57.643 47.619 0.00 0.00 0.00 3.02
2263 2655 3.691609 GGAAAATGGAGTGAAGTGGCTAG 59.308 47.826 0.00 0.00 0.00 3.42
2264 2656 3.561313 GGGAAAATGGAGTGAAGTGGCTA 60.561 47.826 0.00 0.00 0.00 3.93
2265 2657 2.519013 GGAAAATGGAGTGAAGTGGCT 58.481 47.619 0.00 0.00 0.00 4.75
2266 2658 1.546029 GGGAAAATGGAGTGAAGTGGC 59.454 52.381 0.00 0.00 0.00 5.01
2267 2659 1.812571 CGGGAAAATGGAGTGAAGTGG 59.187 52.381 0.00 0.00 0.00 4.00
2268 2660 2.484264 GTCGGGAAAATGGAGTGAAGTG 59.516 50.000 0.00 0.00 0.00 3.16
2269 2661 2.372172 AGTCGGGAAAATGGAGTGAAGT 59.628 45.455 0.00 0.00 0.00 3.01
2270 2662 3.003480 GAGTCGGGAAAATGGAGTGAAG 58.997 50.000 0.00 0.00 0.00 3.02
2271 2663 2.290071 GGAGTCGGGAAAATGGAGTGAA 60.290 50.000 0.00 0.00 0.00 3.18
2272 2664 1.278127 GGAGTCGGGAAAATGGAGTGA 59.722 52.381 0.00 0.00 0.00 3.41
2273 2665 1.679032 GGGAGTCGGGAAAATGGAGTG 60.679 57.143 0.00 0.00 0.00 3.51
2274 2666 0.618981 GGGAGTCGGGAAAATGGAGT 59.381 55.000 0.00 0.00 0.00 3.85
2275 2667 0.107165 GGGGAGTCGGGAAAATGGAG 60.107 60.000 0.00 0.00 0.00 3.86
2276 2668 0.549169 AGGGGAGTCGGGAAAATGGA 60.549 55.000 0.00 0.00 0.00 3.41
2277 2669 0.331616 AAGGGGAGTCGGGAAAATGG 59.668 55.000 0.00 0.00 0.00 3.16
2278 2670 1.004277 TGAAGGGGAGTCGGGAAAATG 59.996 52.381 0.00 0.00 0.00 2.32
2279 2671 1.004394 GTGAAGGGGAGTCGGGAAAAT 59.996 52.381 0.00 0.00 0.00 1.82
2280 2672 0.399075 GTGAAGGGGAGTCGGGAAAA 59.601 55.000 0.00 0.00 0.00 2.29
2281 2673 1.486145 GGTGAAGGGGAGTCGGGAAA 61.486 60.000 0.00 0.00 0.00 3.13
2282 2674 1.916777 GGTGAAGGGGAGTCGGGAA 60.917 63.158 0.00 0.00 0.00 3.97
2283 2675 2.284405 GGTGAAGGGGAGTCGGGA 60.284 66.667 0.00 0.00 0.00 5.14
2284 2676 2.606519 TGGTGAAGGGGAGTCGGG 60.607 66.667 0.00 0.00 0.00 5.14
2285 2677 2.663196 GTGGTGAAGGGGAGTCGG 59.337 66.667 0.00 0.00 0.00 4.79
2286 2678 2.663196 GGTGGTGAAGGGGAGTCG 59.337 66.667 0.00 0.00 0.00 4.18
2287 2679 1.423794 TTGGGTGGTGAAGGGGAGTC 61.424 60.000 0.00 0.00 0.00 3.36
2288 2680 1.386772 TTGGGTGGTGAAGGGGAGT 60.387 57.895 0.00 0.00 0.00 3.85
2289 2681 1.380302 CTTGGGTGGTGAAGGGGAG 59.620 63.158 0.00 0.00 0.00 4.30
2290 2682 2.840753 GCTTGGGTGGTGAAGGGGA 61.841 63.158 0.00 0.00 0.00 4.81
2291 2683 2.283173 GCTTGGGTGGTGAAGGGG 60.283 66.667 0.00 0.00 0.00 4.79
2292 2684 1.303643 GAGCTTGGGTGGTGAAGGG 60.304 63.158 0.00 0.00 0.00 3.95
2293 2685 0.890996 GTGAGCTTGGGTGGTGAAGG 60.891 60.000 0.00 0.00 0.00 3.46
2294 2686 0.890996 GGTGAGCTTGGGTGGTGAAG 60.891 60.000 0.00 0.00 0.00 3.02
2295 2687 1.150536 GGTGAGCTTGGGTGGTGAA 59.849 57.895 0.00 0.00 0.00 3.18
2296 2688 1.768684 GAGGTGAGCTTGGGTGGTGA 61.769 60.000 0.00 0.00 0.00 4.02
2297 2689 1.302832 GAGGTGAGCTTGGGTGGTG 60.303 63.158 0.00 0.00 0.00 4.17
2298 2690 2.529744 GGAGGTGAGCTTGGGTGGT 61.530 63.158 0.00 0.00 0.00 4.16
2299 2691 2.352805 GGAGGTGAGCTTGGGTGG 59.647 66.667 0.00 0.00 0.00 4.61
2300 2692 2.046892 CGGAGGTGAGCTTGGGTG 60.047 66.667 0.00 0.00 0.00 4.61
2317 2709 1.139095 GACACGGACGGAGATCACC 59.861 63.158 0.00 0.00 0.00 4.02
2318 2710 1.139095 GGACACGGACGGAGATCAC 59.861 63.158 0.00 0.00 0.00 3.06
2319 2711 2.404186 CGGACACGGACGGAGATCA 61.404 63.158 0.00 0.00 36.18 2.92
2320 2712 2.408022 CGGACACGGACGGAGATC 59.592 66.667 0.00 0.00 36.18 2.75
2342 2734 3.838271 TCAGATCCGCTGTCCGCC 61.838 66.667 0.00 0.00 45.14 6.13
2343 2735 2.564553 AAGTCAGATCCGCTGTCCGC 62.565 60.000 0.00 0.00 45.14 5.54
2344 2736 0.526524 GAAGTCAGATCCGCTGTCCG 60.527 60.000 0.00 0.00 45.14 4.79
2345 2737 0.526524 CGAAGTCAGATCCGCTGTCC 60.527 60.000 0.00 0.00 45.14 4.02
2346 2738 0.452184 TCGAAGTCAGATCCGCTGTC 59.548 55.000 0.00 0.00 45.14 3.51
2347 2739 0.171455 GTCGAAGTCAGATCCGCTGT 59.829 55.000 0.00 0.00 45.14 4.40
2348 2740 0.526524 GGTCGAAGTCAGATCCGCTG 60.527 60.000 0.00 0.00 46.31 5.18
2349 2741 0.965866 TGGTCGAAGTCAGATCCGCT 60.966 55.000 0.00 0.00 0.00 5.52
2350 2742 0.526524 CTGGTCGAAGTCAGATCCGC 60.527 60.000 5.96 0.00 33.47 5.54
2351 2743 0.811915 ACTGGTCGAAGTCAGATCCG 59.188 55.000 15.61 0.00 35.01 4.18
2352 2744 2.570442 GACTGGTCGAAGTCAGATCC 57.430 55.000 11.55 0.00 44.98 3.36
2358 2750 0.100861 GATCCGGACTGGTCGAAGTC 59.899 60.000 6.12 8.48 44.91 3.01
2359 2751 1.321074 GGATCCGGACTGGTCGAAGT 61.321 60.000 6.12 0.00 39.52 3.01
2360 2752 1.437986 GGATCCGGACTGGTCGAAG 59.562 63.158 6.12 0.00 39.52 3.79
2361 2753 2.412323 CGGATCCGGACTGGTCGAA 61.412 63.158 26.95 0.00 39.52 3.71
2362 2754 2.827190 CGGATCCGGACTGGTCGA 60.827 66.667 26.95 0.00 39.52 4.20
2363 2755 3.122250 GACGGATCCGGACTGGTCG 62.122 68.421 35.87 9.24 44.69 4.79
2364 2756 2.806237 GACGGATCCGGACTGGTC 59.194 66.667 35.87 20.28 44.69 4.02
2365 2757 3.138798 CGACGGATCCGGACTGGT 61.139 66.667 35.87 15.85 44.69 4.00
2366 2758 2.827190 TCGACGGATCCGGACTGG 60.827 66.667 35.87 17.83 44.69 4.00
2367 2759 0.812811 TAGTCGACGGATCCGGACTG 60.813 60.000 36.38 24.91 44.69 3.51
2368 2760 0.532417 CTAGTCGACGGATCCGGACT 60.532 60.000 33.87 33.87 44.69 3.85
2369 2761 1.505477 CCTAGTCGACGGATCCGGAC 61.505 65.000 35.87 30.75 44.69 4.79
2370 2762 1.227764 CCTAGTCGACGGATCCGGA 60.228 63.158 35.87 22.46 44.69 5.14
2371 2763 2.259439 CCCTAGTCGACGGATCCGG 61.259 68.421 35.87 20.49 44.69 5.14
2372 2764 1.525535 ACCCTAGTCGACGGATCCG 60.526 63.158 32.20 32.20 46.03 4.18
2373 2765 0.750911 ACACCCTAGTCGACGGATCC 60.751 60.000 14.03 0.00 0.00 3.36
2374 2766 0.662085 GACACCCTAGTCGACGGATC 59.338 60.000 14.03 7.77 0.00 3.36
2375 2767 0.034767 TGACACCCTAGTCGACGGAT 60.035 55.000 14.03 0.00 41.41 4.18
2376 2768 0.034767 ATGACACCCTAGTCGACGGA 60.035 55.000 14.03 4.17 41.41 4.69
2377 2769 0.381089 GATGACACCCTAGTCGACGG 59.619 60.000 10.46 8.21 41.41 4.79
2378 2770 0.381089 GGATGACACCCTAGTCGACG 59.619 60.000 10.46 0.00 41.41 5.12
2379 2771 1.405821 CAGGATGACACCCTAGTCGAC 59.594 57.143 7.70 7.70 41.41 4.20
2380 2772 1.005569 ACAGGATGACACCCTAGTCGA 59.994 52.381 0.00 0.00 41.41 4.20
2381 2773 1.135139 CACAGGATGACACCCTAGTCG 59.865 57.143 0.00 0.00 41.41 4.18
2382 2774 1.134670 GCACAGGATGACACCCTAGTC 60.135 57.143 0.00 0.00 39.69 2.59
2383 2775 0.905357 GCACAGGATGACACCCTAGT 59.095 55.000 0.00 0.00 39.69 2.57
2384 2776 0.904649 TGCACAGGATGACACCCTAG 59.095 55.000 0.00 0.00 39.69 3.02
2385 2777 0.904649 CTGCACAGGATGACACCCTA 59.095 55.000 0.00 0.00 39.69 3.53
2386 2778 1.681666 CTGCACAGGATGACACCCT 59.318 57.895 0.00 0.00 39.69 4.34
2387 2779 4.308526 CTGCACAGGATGACACCC 57.691 61.111 0.00 0.00 39.69 4.61
2397 2789 1.002868 CCTCCTCCAACCTGCACAG 60.003 63.158 0.00 0.00 0.00 3.66
2398 2790 3.160585 CCTCCTCCAACCTGCACA 58.839 61.111 0.00 0.00 0.00 4.57
2399 2791 2.360475 GCCTCCTCCAACCTGCAC 60.360 66.667 0.00 0.00 0.00 4.57
2400 2792 1.792757 ATTGCCTCCTCCAACCTGCA 61.793 55.000 0.00 0.00 0.00 4.41
2401 2793 1.000396 ATTGCCTCCTCCAACCTGC 60.000 57.895 0.00 0.00 0.00 4.85
2402 2794 0.682209 CCATTGCCTCCTCCAACCTG 60.682 60.000 0.00 0.00 0.00 4.00
2403 2795 1.693640 CCATTGCCTCCTCCAACCT 59.306 57.895 0.00 0.00 0.00 3.50
2404 2796 2.054453 GCCATTGCCTCCTCCAACC 61.054 63.158 0.00 0.00 0.00 3.77
2405 2797 3.608432 GCCATTGCCTCCTCCAAC 58.392 61.111 0.00 0.00 0.00 3.77
2415 2807 3.825611 AATGCGGACGGCCATTGC 61.826 61.111 8.76 2.55 42.61 3.56
2416 2808 2.102749 CAATGCGGACGGCCATTG 59.897 61.111 8.76 7.10 42.61 2.82
2417 2809 3.825611 GCAATGCGGACGGCCATT 61.826 61.111 8.76 0.00 42.61 3.16
2421 2813 4.166011 GAGTGCAATGCGGACGGC 62.166 66.667 0.00 0.00 41.69 5.68
2422 2814 3.499737 GGAGTGCAATGCGGACGG 61.500 66.667 0.00 0.00 41.69 4.79
2423 2815 3.853330 CGGAGTGCAATGCGGACG 61.853 66.667 20.64 0.00 41.69 4.79
2424 2816 2.434185 TCGGAGTGCAATGCGGAC 60.434 61.111 27.03 0.00 34.46 4.79
2425 2817 2.434185 GTCGGAGTGCAATGCGGA 60.434 61.111 27.03 11.72 34.46 5.54
2426 2818 3.853330 CGTCGGAGTGCAATGCGG 61.853 66.667 27.03 9.06 34.46 5.69
2427 2819 1.695893 AATCGTCGGAGTGCAATGCG 61.696 55.000 22.30 22.30 35.07 4.73
2428 2820 0.026803 GAATCGTCGGAGTGCAATGC 59.973 55.000 0.00 0.00 0.00 3.56
2429 2821 0.652592 GGAATCGTCGGAGTGCAATG 59.347 55.000 0.00 0.00 0.00 2.82
2430 2822 0.806102 CGGAATCGTCGGAGTGCAAT 60.806 55.000 0.00 0.00 0.00 3.56
2431 2823 1.445410 CGGAATCGTCGGAGTGCAA 60.445 57.895 0.00 0.00 0.00 4.08
2432 2824 2.180769 CGGAATCGTCGGAGTGCA 59.819 61.111 0.00 0.00 0.00 4.57
2438 2830 2.831742 TCCTCCCGGAATCGTCGG 60.832 66.667 0.73 0.00 46.43 4.79
2439 2831 2.337749 CTGTCCTCCCGGAATCGTCG 62.338 65.000 0.73 0.00 42.08 5.12
2440 2832 1.321074 ACTGTCCTCCCGGAATCGTC 61.321 60.000 0.73 0.00 42.08 4.20
2441 2833 1.305046 ACTGTCCTCCCGGAATCGT 60.305 57.895 0.73 0.00 42.08 3.73
2442 2834 1.141881 CACTGTCCTCCCGGAATCG 59.858 63.158 0.73 0.00 42.08 3.34
2443 2835 1.153349 GCACTGTCCTCCCGGAATC 60.153 63.158 0.73 0.00 42.08 2.52
2444 2836 2.670148 GGCACTGTCCTCCCGGAAT 61.670 63.158 0.73 0.00 42.08 3.01
2445 2837 3.319198 GGCACTGTCCTCCCGGAA 61.319 66.667 0.73 0.00 42.08 4.30
2449 2841 4.083862 GTCGGGCACTGTCCTCCC 62.084 72.222 0.00 0.00 36.68 4.30
2450 2842 4.083862 GGTCGGGCACTGTCCTCC 62.084 72.222 0.00 0.00 39.80 4.30
2451 2843 4.436998 CGGTCGGGCACTGTCCTC 62.437 72.222 0.00 0.00 40.76 3.71
2452 2844 4.988716 TCGGTCGGGCACTGTCCT 62.989 66.667 0.00 0.00 40.76 3.85
2453 2845 4.736896 GTCGGTCGGGCACTGTCC 62.737 72.222 0.00 0.00 39.54 4.02
2463 2855 1.371758 CATATCCTGCCGTCGGTCG 60.372 63.158 13.94 4.04 39.52 4.79
2464 2856 1.664965 GCATATCCTGCCGTCGGTC 60.665 63.158 13.94 5.94 45.66 4.79
2465 2857 2.421739 GCATATCCTGCCGTCGGT 59.578 61.111 13.94 0.00 45.66 4.69
2473 2865 2.666190 CACGCCGGGCATATCCTG 60.666 66.667 20.71 2.83 41.11 3.86
2474 2866 2.842462 TCACGCCGGGCATATCCT 60.842 61.111 20.71 0.00 34.39 3.24
2475 2867 2.665185 GTCACGCCGGGCATATCC 60.665 66.667 20.71 0.00 0.00 2.59
2476 2868 1.664965 GAGTCACGCCGGGCATATC 60.665 63.158 20.71 6.50 0.00 1.63
2477 2869 2.421739 GAGTCACGCCGGGCATAT 59.578 61.111 20.71 0.00 0.00 1.78
2478 2870 3.845259 GGAGTCACGCCGGGCATA 61.845 66.667 20.71 0.00 0.00 3.14
2481 2873 3.792053 CTATGGAGTCACGCCGGGC 62.792 68.421 9.54 9.54 0.00 6.13
2482 2874 2.417516 CTATGGAGTCACGCCGGG 59.582 66.667 2.18 0.00 0.00 5.73
2483 2875 2.279517 GCTATGGAGTCACGCCGG 60.280 66.667 0.00 0.00 0.00 6.13
2484 2876 2.655364 CGCTATGGAGTCACGCCG 60.655 66.667 0.00 0.00 0.00 6.46
2485 2877 1.589196 GACGCTATGGAGTCACGCC 60.589 63.158 8.06 0.00 40.99 5.68
2486 2878 1.589196 GGACGCTATGGAGTCACGC 60.589 63.158 14.48 0.00 42.66 5.34
2487 2879 1.298413 CGGACGCTATGGAGTCACG 60.298 63.158 14.48 11.23 42.66 4.35
2488 2880 1.589196 GCGGACGCTATGGAGTCAC 60.589 63.158 14.48 2.78 42.66 3.67
2489 2881 2.805546 GCGGACGCTATGGAGTCA 59.194 61.111 14.48 0.00 42.66 3.41
2505 2897 4.838152 TCCGAGCGCCCATTGAGC 62.838 66.667 2.29 0.00 40.52 4.26
2506 2898 1.958205 GATCCGAGCGCCCATTGAG 60.958 63.158 2.29 0.00 0.00 3.02
2507 2899 2.108976 GATCCGAGCGCCCATTGA 59.891 61.111 2.29 0.00 0.00 2.57
2508 2900 2.974698 GGATCCGAGCGCCCATTG 60.975 66.667 2.29 0.00 0.00 2.82
2509 2901 4.256180 GGGATCCGAGCGCCCATT 62.256 66.667 2.29 0.00 41.64 3.16
2514 2906 4.292178 CTGGAGGGATCCGAGCGC 62.292 72.222 5.45 0.00 0.00 5.92
2515 2907 3.610669 CCTGGAGGGATCCGAGCG 61.611 72.222 5.45 0.00 37.23 5.03
2529 2921 0.477204 ACCATGATGATCCAGCCCTG 59.523 55.000 0.00 0.00 0.00 4.45
2530 2922 0.769873 GACCATGATGATCCAGCCCT 59.230 55.000 0.00 0.00 0.00 5.19
2531 2923 0.251077 GGACCATGATGATCCAGCCC 60.251 60.000 0.00 0.00 27.47 5.19
2532 2924 0.251077 GGGACCATGATGATCCAGCC 60.251 60.000 8.36 0.00 28.89 4.85
2533 2925 0.769873 AGGGACCATGATGATCCAGC 59.230 55.000 8.36 0.00 28.89 4.85
2534 2926 2.052468 TCAGGGACCATGATGATCCAG 58.948 52.381 8.36 0.00 28.89 3.86
2535 2927 2.195153 TCAGGGACCATGATGATCCA 57.805 50.000 8.36 0.00 28.89 3.41
2541 2933 3.050835 TGATCACATCAGGGACCATGAT 58.949 45.455 15.87 15.87 37.90 2.45
2542 2934 2.171237 GTGATCACATCAGGGACCATGA 59.829 50.000 21.07 11.94 40.53 3.07
2543 2935 2.569059 GTGATCACATCAGGGACCATG 58.431 52.381 21.07 0.00 40.53 3.66
2544 2936 1.492176 GGTGATCACATCAGGGACCAT 59.508 52.381 26.47 0.00 40.53 3.55
2545 2937 0.911769 GGTGATCACATCAGGGACCA 59.088 55.000 26.47 0.00 40.53 4.02
2546 2938 1.207791 AGGTGATCACATCAGGGACC 58.792 55.000 26.47 6.64 40.53 4.46
2547 2939 3.034635 AGTAGGTGATCACATCAGGGAC 58.965 50.000 26.47 14.28 40.53 4.46
2548 2940 3.404869 AGTAGGTGATCACATCAGGGA 57.595 47.619 26.47 1.77 40.53 4.20
2549 2941 5.420421 CCTATAGTAGGTGATCACATCAGGG 59.580 48.000 26.47 12.70 40.53 4.45
2550 2942 6.522625 CCTATAGTAGGTGATCACATCAGG 57.477 45.833 26.47 16.44 40.53 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.