Multiple sequence alignment - TraesCS7B01G195900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G195900 chr7B 100.000 2957 0 0 1 2957 337025595 337022639 0.000000e+00 5461.0
1 TraesCS7B01G195900 chr7B 93.130 131 7 2 2461 2590 685050174 685050045 1.080000e-44 191.0
2 TraesCS7B01G195900 chr7D 92.238 1649 56 26 513 2140 191797239 191795642 0.000000e+00 2270.0
3 TraesCS7B01G195900 chr7D 96.942 327 9 1 1 327 191797562 191797237 5.570000e-152 547.0
4 TraesCS7B01G195900 chr7D 88.718 195 13 3 2271 2465 191795585 191795400 2.290000e-56 230.0
5 TraesCS7B01G195900 chr7D 81.679 262 40 8 2589 2847 191795401 191795145 8.300000e-51 211.0
6 TraesCS7B01G195900 chr7A 90.405 1678 76 33 513 2124 200510884 200509226 0.000000e+00 2128.0
7 TraesCS7B01G195900 chr7A 94.904 157 8 0 1 157 200511178 200511022 2.280000e-61 246.0
8 TraesCS7B01G195900 chr7A 93.103 145 7 2 183 327 200511023 200510882 2.990000e-50 209.0
9 TraesCS7B01G195900 chr6A 96.648 179 6 0 328 506 591098974 591098796 6.200000e-77 298.0
10 TraesCS7B01G195900 chr6A 83.026 271 35 8 1270 1539 502148327 502148587 4.930000e-58 235.0
11 TraesCS7B01G195900 chr4B 95.556 180 7 1 328 506 666660338 666660159 1.340000e-73 287.0
12 TraesCS7B01G195900 chr4B 94.505 182 9 1 328 508 104809975 104810156 2.240000e-71 279.0
13 TraesCS7B01G195900 chr4B 91.975 162 12 1 2132 2292 406389457 406389296 2.970000e-55 226.0
14 TraesCS7B01G195900 chr4B 81.164 292 38 9 2452 2736 107663181 107662900 4.960000e-53 219.0
15 TraesCS7B01G195900 chr4B 90.419 167 13 3 2128 2292 549841921 549841756 1.780000e-52 217.0
16 TraesCS7B01G195900 chr4B 87.568 185 18 5 2117 2298 795720 795538 2.990000e-50 209.0
17 TraesCS7B01G195900 chr3B 95.028 181 8 1 327 506 236494907 236494727 1.730000e-72 283.0
18 TraesCS7B01G195900 chr3B 94.505 182 9 1 328 508 477626917 477626736 2.240000e-71 279.0
19 TraesCS7B01G195900 chr3B 91.018 167 12 3 2128 2292 604820152 604819987 3.840000e-54 222.0
20 TraesCS7B01G195900 chr3B 91.018 167 12 3 2128 2292 674990138 674989973 3.840000e-54 222.0
21 TraesCS7B01G195900 chr3B 92.105 114 8 1 2842 2954 828461667 828461780 3.050000e-35 159.0
22 TraesCS7B01G195900 chr3B 90.678 118 10 1 2841 2957 817865466 817865349 3.950000e-34 156.0
23 TraesCS7B01G195900 chr3B 89.431 123 11 2 2834 2954 205779346 205779468 1.420000e-33 154.0
24 TraesCS7B01G195900 chr3B 90.598 117 9 2 2834 2949 734492302 734492187 1.420000e-33 154.0
25 TraesCS7B01G195900 chr3B 83.226 155 15 6 2589 2740 665261331 665261477 6.650000e-27 132.0
26 TraesCS7B01G195900 chr4A 94.972 179 8 1 328 506 669399250 669399073 2.240000e-71 279.0
27 TraesCS7B01G195900 chr4A 91.964 112 8 1 2844 2954 544199320 544199431 3.950000e-34 156.0
28 TraesCS7B01G195900 chr2B 94.475 181 9 1 327 506 769966496 769966316 8.070000e-71 278.0
29 TraesCS7B01G195900 chr2B 92.537 134 8 2 2458 2590 104819459 104819591 1.080000e-44 191.0
30 TraesCS7B01G195900 chr2B 93.023 129 9 0 2463 2591 655599751 655599879 3.890000e-44 189.0
31 TraesCS7B01G195900 chr2B 91.379 116 9 1 2843 2957 508240237 508240122 1.100000e-34 158.0
32 TraesCS7B01G195900 chr2B 88.710 124 12 2 2836 2957 492089904 492089781 1.840000e-32 150.0
33 TraesCS7B01G195900 chr2B 82.895 152 15 7 2589 2737 779071967 779072110 3.090000e-25 126.0
34 TraesCS7B01G195900 chr5B 93.989 183 8 2 328 509 532890293 532890473 1.040000e-69 274.0
35 TraesCS7B01G195900 chr5B 91.018 167 12 3 2128 2292 566789472 566789637 3.840000e-54 222.0
36 TraesCS7B01G195900 chr5B 92.647 136 10 0 2461 2596 121673320 121673185 2.330000e-46 196.0
37 TraesCS7B01G195900 chr5B 88.793 116 10 1 2624 2736 418818718 418818833 3.970000e-29 139.0
38 TraesCS7B01G195900 chr5B 73.743 179 31 13 1365 1535 650338992 650338822 4.120000e-04 56.5
39 TraesCS7B01G195900 chr6B 91.837 196 13 2 328 521 87631966 87632160 1.350000e-68 270.0
40 TraesCS7B01G195900 chr6B 83.026 271 35 8 1270 1539 542500247 542500507 4.930000e-58 235.0
41 TraesCS7B01G195900 chr6B 92.481 133 10 0 2461 2593 599409343 599409475 1.080000e-44 191.0
42 TraesCS7B01G195900 chr6B 91.912 136 10 1 2464 2599 542584742 542584876 3.890000e-44 189.0
43 TraesCS7B01G195900 chr6D 91.411 163 13 1 2132 2293 438321734 438321896 3.840000e-54 222.0
44 TraesCS7B01G195900 chr2D 90.419 167 14 2 2127 2292 299891719 299891554 4.960000e-53 219.0
45 TraesCS7B01G195900 chr1B 90.419 167 13 3 2128 2292 99886345 99886180 1.780000e-52 217.0
46 TraesCS7B01G195900 chr1B 93.893 131 6 2 2461 2590 584112851 584112980 2.330000e-46 196.0
47 TraesCS7B01G195900 chr1B 91.971 137 8 3 2459 2593 417425148 417425283 3.890000e-44 189.0
48 TraesCS7B01G195900 chrUn 91.304 115 9 1 2841 2954 42660287 42660401 3.950000e-34 156.0
49 TraesCS7B01G195900 chrUn 91.304 115 9 1 2841 2954 350286417 350286531 3.950000e-34 156.0
50 TraesCS7B01G195900 chrUn 89.565 115 9 1 2625 2736 86734222 86734336 3.070000e-30 143.0
51 TraesCS7B01G195900 chrUn 86.992 123 12 2 2618 2737 96464852 96464973 5.140000e-28 135.0
52 TraesCS7B01G195900 chrUn 83.444 151 14 8 2589 2736 27078533 27078675 2.390000e-26 130.0
53 TraesCS7B01G195900 chr5D 84.138 145 12 7 2598 2738 319324970 319325107 2.390000e-26 130.0
54 TraesCS7B01G195900 chr5A 83.803 142 13 5 2598 2736 17231744 17231878 3.090000e-25 126.0
55 TraesCS7B01G195900 chr5A 97.059 34 1 0 1502 1535 645127447 645127414 1.140000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G195900 chr7B 337022639 337025595 2956 True 5461.0 5461 100.00000 1 2957 1 chr7B.!!$R1 2956
1 TraesCS7B01G195900 chr7D 191795145 191797562 2417 True 814.5 2270 89.89425 1 2847 4 chr7D.!!$R1 2846
2 TraesCS7B01G195900 chr7A 200509226 200511178 1952 True 861.0 2128 92.80400 1 2124 3 chr7A.!!$R1 2123

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
860 918 0.109365 CACTCTCTGCGTCTGTCTGG 60.109 60.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2059 2158 0.518636 CAGACCGCCAGTTTCACATG 59.481 55.0 0.0 0.0 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 6.612863 TGAGAGACTAATCATGATTGGAAGGA 59.387 38.462 31.44 11.58 34.02 3.36
61 62 5.427082 CGCACTCGATCAATCTACAATTTC 58.573 41.667 0.00 0.00 38.10 2.17
76 77 8.737168 TCTACAATTTCCTATCAATTCAGTGG 57.263 34.615 0.00 0.00 0.00 4.00
95 96 1.540363 GGGGTATGGCTGATACACACG 60.540 57.143 9.85 0.00 42.16 4.49
144 145 5.929697 TTTCTGCATGATTAATCTAGCCG 57.070 39.130 21.70 17.69 0.00 5.52
233 234 0.901827 ATTCCCACAAATTTCCGGGC 59.098 50.000 14.37 0.00 38.68 6.13
292 293 0.246360 AAGCATCGATCACGTCACCA 59.754 50.000 0.00 0.00 40.69 4.17
331 332 2.666085 ACTATGTCAGTGTCCGGCA 58.334 52.632 0.00 0.00 35.62 5.69
332 333 0.973632 ACTATGTCAGTGTCCGGCAA 59.026 50.000 0.00 0.00 35.62 4.52
333 334 1.555075 ACTATGTCAGTGTCCGGCAAT 59.445 47.619 0.00 0.00 35.62 3.56
334 335 1.935873 CTATGTCAGTGTCCGGCAATG 59.064 52.381 16.71 16.71 43.81 2.82
335 336 1.308069 ATGTCAGTGTCCGGCAATGC 61.308 55.000 17.63 13.91 42.34 3.56
336 337 1.672356 GTCAGTGTCCGGCAATGCT 60.672 57.895 17.63 2.56 42.34 3.79
337 338 0.391130 GTCAGTGTCCGGCAATGCTA 60.391 55.000 17.63 3.41 42.34 3.49
338 339 0.391130 TCAGTGTCCGGCAATGCTAC 60.391 55.000 17.63 2.11 42.34 3.58
339 340 0.673333 CAGTGTCCGGCAATGCTACA 60.673 55.000 12.11 4.88 36.35 2.74
340 341 0.673644 AGTGTCCGGCAATGCTACAC 60.674 55.000 21.99 21.99 37.13 2.90
341 342 1.739929 TGTCCGGCAATGCTACACG 60.740 57.895 4.82 0.00 0.00 4.49
342 343 1.740296 GTCCGGCAATGCTACACGT 60.740 57.895 4.82 0.00 0.00 4.49
343 344 0.458889 GTCCGGCAATGCTACACGTA 60.459 55.000 4.82 0.00 0.00 3.57
344 345 0.458889 TCCGGCAATGCTACACGTAC 60.459 55.000 4.82 0.00 0.00 3.67
345 346 0.738063 CCGGCAATGCTACACGTACA 60.738 55.000 4.82 0.00 0.00 2.90
346 347 1.072391 CGGCAATGCTACACGTACAA 58.928 50.000 4.82 0.00 0.00 2.41
347 348 1.663643 CGGCAATGCTACACGTACAAT 59.336 47.619 4.82 0.00 0.00 2.71
348 349 2.285602 CGGCAATGCTACACGTACAATC 60.286 50.000 4.82 0.00 0.00 2.67
349 350 2.285602 GGCAATGCTACACGTACAATCG 60.286 50.000 4.82 0.00 0.00 3.34
350 351 2.601314 GCAATGCTACACGTACAATCGA 59.399 45.455 0.00 0.00 34.70 3.59
351 352 3.245284 GCAATGCTACACGTACAATCGAT 59.755 43.478 0.00 0.00 34.70 3.59
352 353 4.260212 GCAATGCTACACGTACAATCGATT 60.260 41.667 4.39 4.39 34.70 3.34
353 354 5.726688 GCAATGCTACACGTACAATCGATTT 60.727 40.000 8.21 3.14 34.70 2.17
354 355 6.508880 GCAATGCTACACGTACAATCGATTTA 60.509 38.462 8.21 2.16 34.70 1.40
355 356 5.937165 TGCTACACGTACAATCGATTTAC 57.063 39.130 8.21 12.75 34.70 2.01
356 357 5.400703 TGCTACACGTACAATCGATTTACA 58.599 37.500 8.21 0.00 34.70 2.41
357 358 5.513849 TGCTACACGTACAATCGATTTACAG 59.486 40.000 8.21 11.37 34.70 2.74
358 359 5.051907 GCTACACGTACAATCGATTTACAGG 60.052 44.000 8.21 10.82 34.70 4.00
359 360 3.615496 ACACGTACAATCGATTTACAGGC 59.385 43.478 8.21 0.00 34.70 4.85
360 361 3.863424 CACGTACAATCGATTTACAGGCT 59.137 43.478 8.21 0.00 34.70 4.58
361 362 4.328983 CACGTACAATCGATTTACAGGCTT 59.671 41.667 8.21 0.00 34.70 4.35
362 363 4.933400 ACGTACAATCGATTTACAGGCTTT 59.067 37.500 8.21 0.00 34.70 3.51
363 364 5.410439 ACGTACAATCGATTTACAGGCTTTT 59.590 36.000 8.21 0.00 34.70 2.27
364 365 6.591062 ACGTACAATCGATTTACAGGCTTTTA 59.409 34.615 8.21 0.00 34.70 1.52
365 366 6.898189 CGTACAATCGATTTACAGGCTTTTAC 59.102 38.462 8.21 0.00 0.00 2.01
366 367 6.811253 ACAATCGATTTACAGGCTTTTACA 57.189 33.333 8.21 0.00 0.00 2.41
367 368 6.842163 ACAATCGATTTACAGGCTTTTACAG 58.158 36.000 8.21 0.00 0.00 2.74
368 369 6.128007 ACAATCGATTTACAGGCTTTTACAGG 60.128 38.462 8.21 0.00 0.00 4.00
369 370 5.155278 TCGATTTACAGGCTTTTACAGGA 57.845 39.130 0.00 0.00 0.00 3.86
370 371 5.741011 TCGATTTACAGGCTTTTACAGGAT 58.259 37.500 0.00 0.00 0.00 3.24
371 372 5.584649 TCGATTTACAGGCTTTTACAGGATG 59.415 40.000 0.00 0.00 46.00 3.51
372 373 5.220854 CGATTTACAGGCTTTTACAGGATGG 60.221 44.000 0.00 0.00 43.62 3.51
373 374 4.650972 TTACAGGCTTTTACAGGATGGT 57.349 40.909 0.00 0.00 43.62 3.55
374 375 3.525800 ACAGGCTTTTACAGGATGGTT 57.474 42.857 0.00 0.00 43.62 3.67
375 376 4.650972 ACAGGCTTTTACAGGATGGTTA 57.349 40.909 0.00 0.00 43.62 2.85
376 377 4.993028 ACAGGCTTTTACAGGATGGTTAA 58.007 39.130 0.00 0.00 43.62 2.01
377 378 5.580022 ACAGGCTTTTACAGGATGGTTAAT 58.420 37.500 0.00 0.00 43.62 1.40
378 379 6.016555 ACAGGCTTTTACAGGATGGTTAATT 58.983 36.000 0.00 0.00 43.62 1.40
379 380 6.496911 ACAGGCTTTTACAGGATGGTTAATTT 59.503 34.615 0.00 0.00 43.62 1.82
380 381 7.016170 ACAGGCTTTTACAGGATGGTTAATTTT 59.984 33.333 0.00 0.00 43.62 1.82
381 382 7.331687 CAGGCTTTTACAGGATGGTTAATTTTG 59.668 37.037 0.00 0.00 43.62 2.44
382 383 7.234577 AGGCTTTTACAGGATGGTTAATTTTGA 59.765 33.333 0.00 0.00 43.62 2.69
383 384 8.040727 GGCTTTTACAGGATGGTTAATTTTGAT 58.959 33.333 0.00 0.00 43.62 2.57
384 385 9.435688 GCTTTTACAGGATGGTTAATTTTGATT 57.564 29.630 0.00 0.00 43.62 2.57
386 387 9.717942 TTTTACAGGATGGTTAATTTTGATTGG 57.282 29.630 0.00 0.00 43.62 3.16
387 388 8.657387 TTACAGGATGGTTAATTTTGATTGGA 57.343 30.769 0.00 0.00 43.62 3.53
388 389 6.935167 ACAGGATGGTTAATTTTGATTGGAC 58.065 36.000 0.00 0.00 43.62 4.02
389 390 6.496565 ACAGGATGGTTAATTTTGATTGGACA 59.503 34.615 0.00 0.00 43.62 4.02
390 391 7.016072 ACAGGATGGTTAATTTTGATTGGACAA 59.984 33.333 0.00 0.00 43.62 3.18
391 392 8.042515 CAGGATGGTTAATTTTGATTGGACAAT 58.957 33.333 0.00 0.00 0.00 2.71
392 393 9.265862 AGGATGGTTAATTTTGATTGGACAATA 57.734 29.630 0.00 0.00 0.00 1.90
393 394 9.533253 GGATGGTTAATTTTGATTGGACAATAG 57.467 33.333 0.00 0.00 0.00 1.73
394 395 9.533253 GATGGTTAATTTTGATTGGACAATAGG 57.467 33.333 0.00 0.00 0.00 2.57
395 396 8.429237 TGGTTAATTTTGATTGGACAATAGGT 57.571 30.769 0.00 0.00 0.00 3.08
396 397 8.310382 TGGTTAATTTTGATTGGACAATAGGTG 58.690 33.333 0.00 0.00 0.00 4.00
397 398 8.527810 GGTTAATTTTGATTGGACAATAGGTGA 58.472 33.333 0.00 0.00 0.00 4.02
398 399 9.573133 GTTAATTTTGATTGGACAATAGGTGAG 57.427 33.333 0.00 0.00 0.00 3.51
399 400 5.643379 TTTTGATTGGACAATAGGTGAGC 57.357 39.130 0.00 0.00 0.00 4.26
400 401 2.905075 TGATTGGACAATAGGTGAGCG 58.095 47.619 0.00 0.00 0.00 5.03
401 402 2.213499 GATTGGACAATAGGTGAGCGG 58.787 52.381 0.00 0.00 0.00 5.52
402 403 0.251916 TTGGACAATAGGTGAGCGGG 59.748 55.000 0.00 0.00 0.00 6.13
403 404 1.146263 GGACAATAGGTGAGCGGGG 59.854 63.158 0.00 0.00 0.00 5.73
404 405 1.523938 GACAATAGGTGAGCGGGGC 60.524 63.158 0.00 0.00 0.00 5.80
405 406 2.588877 CAATAGGTGAGCGGGGCG 60.589 66.667 0.00 0.00 0.00 6.13
406 407 3.861797 AATAGGTGAGCGGGGCGG 61.862 66.667 0.00 0.00 0.00 6.13
437 438 4.566426 CTGAAAATCAGGGAAGAGAGGT 57.434 45.455 0.00 0.00 40.71 3.85
438 439 4.916183 CTGAAAATCAGGGAAGAGAGGTT 58.084 43.478 0.00 0.00 40.71 3.50
439 440 5.320277 CTGAAAATCAGGGAAGAGAGGTTT 58.680 41.667 0.00 0.00 40.71 3.27
440 441 5.072741 TGAAAATCAGGGAAGAGAGGTTTG 58.927 41.667 0.00 0.00 0.00 2.93
441 442 4.731313 AAATCAGGGAAGAGAGGTTTGT 57.269 40.909 0.00 0.00 0.00 2.83
442 443 3.710209 ATCAGGGAAGAGAGGTTTGTG 57.290 47.619 0.00 0.00 0.00 3.33
443 444 2.689658 TCAGGGAAGAGAGGTTTGTGA 58.310 47.619 0.00 0.00 0.00 3.58
444 445 3.251484 TCAGGGAAGAGAGGTTTGTGAT 58.749 45.455 0.00 0.00 0.00 3.06
445 446 3.652869 TCAGGGAAGAGAGGTTTGTGATT 59.347 43.478 0.00 0.00 0.00 2.57
446 447 3.755378 CAGGGAAGAGAGGTTTGTGATTG 59.245 47.826 0.00 0.00 0.00 2.67
447 448 3.084786 GGGAAGAGAGGTTTGTGATTGG 58.915 50.000 0.00 0.00 0.00 3.16
448 449 3.498661 GGGAAGAGAGGTTTGTGATTGGT 60.499 47.826 0.00 0.00 0.00 3.67
449 450 4.145052 GGAAGAGAGGTTTGTGATTGGTT 58.855 43.478 0.00 0.00 0.00 3.67
450 451 4.022849 GGAAGAGAGGTTTGTGATTGGTTG 60.023 45.833 0.00 0.00 0.00 3.77
451 452 4.170468 AGAGAGGTTTGTGATTGGTTGT 57.830 40.909 0.00 0.00 0.00 3.32
452 453 4.536765 AGAGAGGTTTGTGATTGGTTGTT 58.463 39.130 0.00 0.00 0.00 2.83
453 454 5.690865 AGAGAGGTTTGTGATTGGTTGTTA 58.309 37.500 0.00 0.00 0.00 2.41
454 455 5.765182 AGAGAGGTTTGTGATTGGTTGTTAG 59.235 40.000 0.00 0.00 0.00 2.34
455 456 5.690865 AGAGGTTTGTGATTGGTTGTTAGA 58.309 37.500 0.00 0.00 0.00 2.10
456 457 6.306987 AGAGGTTTGTGATTGGTTGTTAGAT 58.693 36.000 0.00 0.00 0.00 1.98
457 458 6.207417 AGAGGTTTGTGATTGGTTGTTAGATG 59.793 38.462 0.00 0.00 0.00 2.90
458 459 5.243730 AGGTTTGTGATTGGTTGTTAGATGG 59.756 40.000 0.00 0.00 0.00 3.51
459 460 5.242838 GGTTTGTGATTGGTTGTTAGATGGA 59.757 40.000 0.00 0.00 0.00 3.41
460 461 6.239176 GGTTTGTGATTGGTTGTTAGATGGAA 60.239 38.462 0.00 0.00 0.00 3.53
461 462 6.573664 TTGTGATTGGTTGTTAGATGGAAG 57.426 37.500 0.00 0.00 0.00 3.46
462 463 5.875224 TGTGATTGGTTGTTAGATGGAAGA 58.125 37.500 0.00 0.00 0.00 2.87
463 464 6.303054 TGTGATTGGTTGTTAGATGGAAGAA 58.697 36.000 0.00 0.00 0.00 2.52
464 465 6.430925 TGTGATTGGTTGTTAGATGGAAGAAG 59.569 38.462 0.00 0.00 0.00 2.85
465 466 5.415701 TGATTGGTTGTTAGATGGAAGAAGC 59.584 40.000 0.00 0.00 32.39 3.86
466 467 3.334691 TGGTTGTTAGATGGAAGAAGCG 58.665 45.455 0.00 0.00 33.95 4.68
467 468 3.244422 TGGTTGTTAGATGGAAGAAGCGT 60.244 43.478 0.00 0.00 33.95 5.07
468 469 3.125316 GGTTGTTAGATGGAAGAAGCGTG 59.875 47.826 0.00 0.00 0.00 5.34
469 470 3.678056 TGTTAGATGGAAGAAGCGTGT 57.322 42.857 0.00 0.00 0.00 4.49
470 471 4.794278 TGTTAGATGGAAGAAGCGTGTA 57.206 40.909 0.00 0.00 0.00 2.90
471 472 5.142061 TGTTAGATGGAAGAAGCGTGTAA 57.858 39.130 0.00 0.00 0.00 2.41
472 473 5.543714 TGTTAGATGGAAGAAGCGTGTAAA 58.456 37.500 0.00 0.00 0.00 2.01
473 474 5.992829 TGTTAGATGGAAGAAGCGTGTAAAA 59.007 36.000 0.00 0.00 0.00 1.52
474 475 6.483974 TGTTAGATGGAAGAAGCGTGTAAAAA 59.516 34.615 0.00 0.00 0.00 1.94
475 476 5.358298 AGATGGAAGAAGCGTGTAAAAAC 57.642 39.130 0.00 0.00 0.00 2.43
476 477 3.595709 TGGAAGAAGCGTGTAAAAACG 57.404 42.857 0.00 0.00 46.30 3.60
477 478 2.937799 TGGAAGAAGCGTGTAAAAACGT 59.062 40.909 0.00 0.00 45.32 3.99
478 479 3.242478 TGGAAGAAGCGTGTAAAAACGTG 60.242 43.478 0.00 0.00 45.32 4.49
479 480 3.242511 GGAAGAAGCGTGTAAAAACGTGT 60.243 43.478 0.00 0.00 45.32 4.49
480 481 4.025813 GGAAGAAGCGTGTAAAAACGTGTA 60.026 41.667 0.00 0.00 45.32 2.90
481 482 5.467902 AAGAAGCGTGTAAAAACGTGTAA 57.532 34.783 0.00 0.00 45.32 2.41
482 483 5.074430 AGAAGCGTGTAAAAACGTGTAAG 57.926 39.130 0.00 0.00 45.32 2.34
483 484 4.567959 AGAAGCGTGTAAAAACGTGTAAGT 59.432 37.500 0.00 0.00 45.32 2.24
484 485 4.442350 AGCGTGTAAAAACGTGTAAGTC 57.558 40.909 0.00 0.00 45.32 3.01
485 486 4.114794 AGCGTGTAAAAACGTGTAAGTCT 58.885 39.130 0.00 0.00 45.32 3.24
486 487 4.567959 AGCGTGTAAAAACGTGTAAGTCTT 59.432 37.500 0.00 0.00 45.32 3.01
487 488 5.063817 AGCGTGTAAAAACGTGTAAGTCTTT 59.936 36.000 0.00 0.00 45.32 2.52
488 489 5.168329 GCGTGTAAAAACGTGTAAGTCTTTG 59.832 40.000 0.00 0.00 45.32 2.77
489 490 6.242829 CGTGTAAAAACGTGTAAGTCTTTGT 58.757 36.000 0.00 0.00 38.74 2.83
490 491 7.390247 CGTGTAAAAACGTGTAAGTCTTTGTA 58.610 34.615 0.00 0.00 38.74 2.41
491 492 8.057742 CGTGTAAAAACGTGTAAGTCTTTGTAT 58.942 33.333 0.00 0.00 38.74 2.29
492 493 9.150653 GTGTAAAAACGTGTAAGTCTTTGTATG 57.849 33.333 0.00 0.00 0.00 2.39
493 494 8.881743 TGTAAAAACGTGTAAGTCTTTGTATGT 58.118 29.630 0.00 0.00 0.00 2.29
494 495 9.361712 GTAAAAACGTGTAAGTCTTTGTATGTC 57.638 33.333 0.00 0.00 0.00 3.06
495 496 7.781548 AAAACGTGTAAGTCTTTGTATGTCT 57.218 32.000 0.00 0.00 0.00 3.41
496 497 8.876275 AAAACGTGTAAGTCTTTGTATGTCTA 57.124 30.769 0.00 0.00 0.00 2.59
497 498 8.516811 AAACGTGTAAGTCTTTGTATGTCTAG 57.483 34.615 0.00 0.00 0.00 2.43
498 499 6.091437 ACGTGTAAGTCTTTGTATGTCTAGC 58.909 40.000 0.00 0.00 0.00 3.42
499 500 6.090783 CGTGTAAGTCTTTGTATGTCTAGCA 58.909 40.000 0.00 0.00 0.00 3.49
500 501 6.752351 CGTGTAAGTCTTTGTATGTCTAGCAT 59.248 38.462 0.00 5.25 41.42 3.79
501 502 7.275779 CGTGTAAGTCTTTGTATGTCTAGCATT 59.724 37.037 5.22 0.00 38.94 3.56
502 503 8.936864 GTGTAAGTCTTTGTATGTCTAGCATTT 58.063 33.333 5.22 0.00 38.94 2.32
503 504 9.502091 TGTAAGTCTTTGTATGTCTAGCATTTT 57.498 29.630 5.22 0.00 38.94 1.82
506 507 8.621532 AGTCTTTGTATGTCTAGCATTTTTGA 57.378 30.769 5.22 0.00 38.94 2.69
507 508 9.236006 AGTCTTTGTATGTCTAGCATTTTTGAT 57.764 29.630 5.22 0.00 38.94 2.57
508 509 9.282247 GTCTTTGTATGTCTAGCATTTTTGATG 57.718 33.333 5.22 0.00 38.94 3.07
509 510 7.970061 TCTTTGTATGTCTAGCATTTTTGATGC 59.030 33.333 2.90 2.90 44.85 3.91
613 618 0.322187 AGCTAAAATCCACGGCCGTT 60.322 50.000 32.11 16.45 0.00 4.44
729 734 2.815211 CGGCGTGTATGTGCTGCT 60.815 61.111 0.00 0.00 0.00 4.24
756 766 1.521681 GCCAAAGCGCCGAGTATCT 60.522 57.895 2.29 0.00 0.00 1.98
757 767 1.491505 GCCAAAGCGCCGAGTATCTC 61.492 60.000 2.29 0.00 0.00 2.75
758 768 0.179111 CCAAAGCGCCGAGTATCTCA 60.179 55.000 2.29 0.00 0.00 3.27
761 771 1.388065 AAGCGCCGAGTATCTCAGCT 61.388 55.000 2.29 5.01 37.12 4.24
763 773 1.007964 CGCCGAGTATCTCAGCTGG 60.008 63.158 15.13 4.77 32.32 4.85
830 857 2.044123 AATCCTTCTGCGGCTAAAGG 57.956 50.000 20.88 20.88 40.80 3.11
831 858 0.464554 ATCCTTCTGCGGCTAAAGGC 60.465 55.000 21.65 0.00 39.55 4.35
832 859 1.078143 CCTTCTGCGGCTAAAGGCT 60.078 57.895 17.05 0.00 41.46 4.58
833 860 0.178068 CCTTCTGCGGCTAAAGGCTA 59.822 55.000 17.05 0.00 41.46 3.93
834 861 1.406887 CCTTCTGCGGCTAAAGGCTAA 60.407 52.381 17.05 0.00 41.46 3.09
835 862 2.356135 CTTCTGCGGCTAAAGGCTAAA 58.644 47.619 0.00 0.00 41.46 1.85
836 863 2.024176 TCTGCGGCTAAAGGCTAAAG 57.976 50.000 0.00 0.00 41.46 1.85
840 867 0.378610 CGGCTAAAGGCTAAAGCTGC 59.621 55.000 17.45 0.00 41.70 5.25
852 879 2.388890 AAAGCTGCCACTCTCTGCGT 62.389 55.000 0.00 0.00 34.25 5.24
860 918 0.109365 CACTCTCTGCGTCTGTCTGG 60.109 60.000 0.00 0.00 0.00 3.86
861 919 1.153862 CTCTCTGCGTCTGTCTGGC 60.154 63.158 0.00 0.00 0.00 4.85
937 996 6.628065 CACGAAACATAGTACAGATCGACTAC 59.372 42.308 7.17 0.00 31.15 2.73
940 999 6.621316 AACATAGTACAGATCGACTACAGG 57.379 41.667 7.17 4.33 31.15 4.00
965 1024 3.124921 GCACAGGCCGCGTGTTAT 61.125 61.111 23.92 0.00 36.71 1.89
967 1026 2.125269 ACAGGCCGCGTGTTATCC 60.125 61.111 12.86 0.00 0.00 2.59
968 1027 2.186903 CAGGCCGCGTGTTATCCT 59.813 61.111 4.92 0.00 0.00 3.24
969 1028 2.173669 CAGGCCGCGTGTTATCCTG 61.174 63.158 4.92 7.77 38.41 3.86
994 1053 0.972134 CTGAGGAGTGAAGTGAGCCA 59.028 55.000 0.00 0.00 0.00 4.75
1206 1280 2.266055 GAGGGAGCCACCTTCGTG 59.734 66.667 0.00 0.00 42.10 4.35
1207 1281 3.959991 GAGGGAGCCACCTTCGTGC 62.960 68.421 0.00 0.00 42.10 5.34
1223 1297 2.113433 TGCTCTCTACTCCGTCCGC 61.113 63.158 0.00 0.00 0.00 5.54
1544 1618 2.278013 CGAGAAGACGCCTACGCC 60.278 66.667 0.00 0.00 45.53 5.68
1545 1619 2.762234 CGAGAAGACGCCTACGCCT 61.762 63.158 0.00 0.00 45.53 5.52
1546 1620 1.226717 GAGAAGACGCCTACGCCTG 60.227 63.158 0.00 0.00 45.53 4.85
1547 1621 2.886124 GAAGACGCCTACGCCTGC 60.886 66.667 0.00 0.00 45.53 4.85
1548 1622 3.642778 GAAGACGCCTACGCCTGCA 62.643 63.158 0.00 0.00 45.53 4.41
1549 1623 3.934391 AAGACGCCTACGCCTGCAC 62.934 63.158 0.00 0.00 45.53 4.57
1564 1638 1.999735 CTGCACACACAGGTAATACCG 59.000 52.381 3.47 2.02 44.90 4.02
1575 1653 5.238432 CACAGGTAATACCGTACGTACCATA 59.762 44.000 25.70 12.30 44.90 2.74
1593 1671 3.243168 CCATACTTGCTACGTACGCCTTA 60.243 47.826 16.72 0.00 0.00 2.69
1599 1677 5.471456 ACTTGCTACGTACGCCTTATATACT 59.529 40.000 16.72 0.00 0.00 2.12
1604 1682 3.571401 ACGTACGCCTTATATACTTGCCT 59.429 43.478 16.72 0.00 0.00 4.75
1987 2083 7.790782 ATGTTTTTCATACCATGGGTTAACT 57.209 32.000 18.09 0.00 37.09 2.24
2040 2139 7.043458 GCGGTAATAAGTTAAGCGTGTATGTTA 60.043 37.037 7.72 0.00 36.56 2.41
2041 2140 8.261908 CGGTAATAAGTTAAGCGTGTATGTTAC 58.738 37.037 0.00 0.00 0.00 2.50
2042 2141 9.305925 GGTAATAAGTTAAGCGTGTATGTTACT 57.694 33.333 0.00 0.00 0.00 2.24
2047 2146 8.767478 AAGTTAAGCGTGTATGTTACTATGTT 57.233 30.769 0.00 0.00 0.00 2.71
2140 2239 1.831736 TGCTTGCTTAGTACTCCCTCC 59.168 52.381 0.00 0.00 0.00 4.30
2141 2240 1.202428 GCTTGCTTAGTACTCCCTCCG 60.202 57.143 0.00 0.00 0.00 4.63
2142 2241 2.100989 CTTGCTTAGTACTCCCTCCGT 58.899 52.381 0.00 0.00 0.00 4.69
2144 2243 3.370840 TGCTTAGTACTCCCTCCGTTA 57.629 47.619 0.00 0.00 0.00 3.18
2145 2244 3.019564 TGCTTAGTACTCCCTCCGTTAC 58.980 50.000 0.00 0.00 0.00 2.50
2146 2245 3.286353 GCTTAGTACTCCCTCCGTTACT 58.714 50.000 0.00 0.00 0.00 2.24
2150 2249 6.040278 GCTTAGTACTCCCTCCGTTACTAAAT 59.960 42.308 0.00 0.00 32.02 1.40
2152 2251 9.294614 CTTAGTACTCCCTCCGTTACTAAATAT 57.705 37.037 0.00 0.00 32.02 1.28
2155 2254 9.294614 AGTACTCCCTCCGTTACTAAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
2157 2256 8.175925 ACTCCCTCCGTTACTAAATATAAGTC 57.824 38.462 0.00 0.00 0.00 3.01
2159 2258 8.773033 TCCCTCCGTTACTAAATATAAGTCTT 57.227 34.615 0.00 0.00 0.00 3.01
2161 2260 9.473640 CCCTCCGTTACTAAATATAAGTCTTTC 57.526 37.037 0.00 0.00 0.00 2.62
2193 2292 9.797642 ATTTCAATATGGATTACATACAGAGCA 57.202 29.630 0.00 0.00 44.41 4.26
2194 2293 9.625747 TTTCAATATGGATTACATACAGAGCAA 57.374 29.630 0.00 0.00 44.41 3.91
2195 2294 9.625747 TTCAATATGGATTACATACAGAGCAAA 57.374 29.630 0.00 0.00 44.41 3.68
2196 2295 9.625747 TCAATATGGATTACATACAGAGCAAAA 57.374 29.630 0.00 0.00 44.41 2.44
2199 2298 9.797642 ATATGGATTACATACAGAGCAAAATGA 57.202 29.630 0.00 0.00 44.41 2.57
2200 2299 7.936496 TGGATTACATACAGAGCAAAATGAA 57.064 32.000 0.00 0.00 0.00 2.57
2201 2300 7.761409 TGGATTACATACAGAGCAAAATGAAC 58.239 34.615 0.00 0.00 0.00 3.18
2202 2301 6.907212 GGATTACATACAGAGCAAAATGAACG 59.093 38.462 0.00 0.00 0.00 3.95
2203 2302 7.201609 GGATTACATACAGAGCAAAATGAACGA 60.202 37.037 0.00 0.00 0.00 3.85
2204 2303 5.940192 ACATACAGAGCAAAATGAACGAA 57.060 34.783 0.00 0.00 0.00 3.85
2205 2304 6.500684 ACATACAGAGCAAAATGAACGAAT 57.499 33.333 0.00 0.00 0.00 3.34
2206 2305 6.913170 ACATACAGAGCAAAATGAACGAATT 58.087 32.000 0.00 0.00 0.00 2.17
2207 2306 7.370383 ACATACAGAGCAAAATGAACGAATTT 58.630 30.769 0.00 0.00 0.00 1.82
2208 2307 8.511321 ACATACAGAGCAAAATGAACGAATTTA 58.489 29.630 0.00 0.00 0.00 1.40
2209 2308 8.788813 CATACAGAGCAAAATGAACGAATTTAC 58.211 33.333 0.00 0.00 0.00 2.01
2210 2309 6.734137 ACAGAGCAAAATGAACGAATTTACA 58.266 32.000 0.00 0.00 0.00 2.41
2211 2310 6.636850 ACAGAGCAAAATGAACGAATTTACAC 59.363 34.615 0.00 0.00 0.00 2.90
2212 2311 6.857964 CAGAGCAAAATGAACGAATTTACACT 59.142 34.615 0.00 0.00 0.00 3.55
2213 2312 7.059945 CAGAGCAAAATGAACGAATTTACACTC 59.940 37.037 0.00 1.56 0.00 3.51
2214 2313 6.970484 AGCAAAATGAACGAATTTACACTCT 58.030 32.000 0.00 0.00 0.00 3.24
2215 2314 8.094798 AGCAAAATGAACGAATTTACACTCTA 57.905 30.769 0.00 0.00 0.00 2.43
2216 2315 8.564574 AGCAAAATGAACGAATTTACACTCTAA 58.435 29.630 0.00 0.00 0.00 2.10
2217 2316 9.176181 GCAAAATGAACGAATTTACACTCTAAA 57.824 29.630 0.00 0.00 0.00 1.85
2287 2386 9.549078 GAAAGACTTATATTTAGGAACAGAGGG 57.451 37.037 0.00 0.00 0.00 4.30
2296 2395 7.698163 ATTTAGGAACAGAGGGAGTATCATT 57.302 36.000 0.00 0.00 36.25 2.57
2305 2404 8.567285 ACAGAGGGAGTATCATTTTTAAGTTG 57.433 34.615 0.00 0.00 36.25 3.16
2344 2443 6.717540 TGGTAAGCTAAATGCAACCTTTCTAA 59.282 34.615 0.00 0.00 44.98 2.10
2378 2477 6.159293 TCTAGACTTGTGTTCAGCTTGTATG 58.841 40.000 0.00 0.00 0.00 2.39
2379 2478 4.067896 AGACTTGTGTTCAGCTTGTATGG 58.932 43.478 0.00 0.00 0.00 2.74
2412 2511 5.590145 ACGCATTTGAGCAATTGCAATATA 58.410 33.333 30.89 13.05 43.78 0.86
2413 2512 6.218019 ACGCATTTGAGCAATTGCAATATAT 58.782 32.000 30.89 14.62 43.78 0.86
2414 2513 7.369607 ACGCATTTGAGCAATTGCAATATATA 58.630 30.769 30.89 10.52 43.78 0.86
2415 2514 7.326789 ACGCATTTGAGCAATTGCAATATATAC 59.673 33.333 30.89 13.23 43.78 1.47
2416 2515 7.326547 CGCATTTGAGCAATTGCAATATATACA 59.673 33.333 30.89 14.14 43.78 2.29
2417 2516 9.146984 GCATTTGAGCAATTGCAATATATACAT 57.853 29.630 30.89 7.20 43.35 2.29
2421 2520 9.519191 TTGAGCAATTGCAATATATACATAGGT 57.481 29.630 30.89 5.29 45.16 3.08
2422 2521 9.519191 TGAGCAATTGCAATATATACATAGGTT 57.481 29.630 30.89 4.89 45.16 3.50
2468 2567 8.697292 AGTACTCATTCTGTTCCTAAATACTCC 58.303 37.037 0.00 0.00 0.00 3.85
2469 2568 6.890293 ACTCATTCTGTTCCTAAATACTCCC 58.110 40.000 0.00 0.00 0.00 4.30
2470 2569 6.674419 ACTCATTCTGTTCCTAAATACTCCCT 59.326 38.462 0.00 0.00 0.00 4.20
2471 2570 7.125792 TCATTCTGTTCCTAAATACTCCCTC 57.874 40.000 0.00 0.00 0.00 4.30
2472 2571 5.952347 TTCTGTTCCTAAATACTCCCTCC 57.048 43.478 0.00 0.00 0.00 4.30
2473 2572 4.296056 TCTGTTCCTAAATACTCCCTCCC 58.704 47.826 0.00 0.00 0.00 4.30
2474 2573 4.015541 TCTGTTCCTAAATACTCCCTCCCT 60.016 45.833 0.00 0.00 0.00 4.20
2475 2574 4.296056 TGTTCCTAAATACTCCCTCCCTC 58.704 47.826 0.00 0.00 0.00 4.30
2476 2575 3.632420 TCCTAAATACTCCCTCCCTCC 57.368 52.381 0.00 0.00 0.00 4.30
2477 2576 2.181642 TCCTAAATACTCCCTCCCTCCC 59.818 54.545 0.00 0.00 0.00 4.30
2478 2577 2.090153 CCTAAATACTCCCTCCCTCCCA 60.090 54.545 0.00 0.00 0.00 4.37
2479 2578 2.680439 AAATACTCCCTCCCTCCCAA 57.320 50.000 0.00 0.00 0.00 4.12
2480 2579 2.680439 AATACTCCCTCCCTCCCAAA 57.320 50.000 0.00 0.00 0.00 3.28
2481 2580 2.680439 ATACTCCCTCCCTCCCAAAA 57.320 50.000 0.00 0.00 0.00 2.44
2482 2581 2.680439 TACTCCCTCCCTCCCAAAAT 57.320 50.000 0.00 0.00 0.00 1.82
2483 2582 1.773541 ACTCCCTCCCTCCCAAAATT 58.226 50.000 0.00 0.00 0.00 1.82
2484 2583 1.641192 ACTCCCTCCCTCCCAAAATTC 59.359 52.381 0.00 0.00 0.00 2.17
2485 2584 1.925959 CTCCCTCCCTCCCAAAATTCT 59.074 52.381 0.00 0.00 0.00 2.40
2486 2585 2.313041 CTCCCTCCCTCCCAAAATTCTT 59.687 50.000 0.00 0.00 0.00 2.52
2487 2586 2.042979 TCCCTCCCTCCCAAAATTCTTG 59.957 50.000 0.00 0.00 0.00 3.02
2488 2587 2.225369 CCCTCCCTCCCAAAATTCTTGT 60.225 50.000 0.00 0.00 0.00 3.16
2489 2588 3.092301 CCTCCCTCCCAAAATTCTTGTC 58.908 50.000 0.00 0.00 0.00 3.18
2490 2589 3.245407 CCTCCCTCCCAAAATTCTTGTCT 60.245 47.826 0.00 0.00 0.00 3.41
2491 2590 4.411013 CTCCCTCCCAAAATTCTTGTCTT 58.589 43.478 0.00 0.00 0.00 3.01
2492 2591 5.516591 CCTCCCTCCCAAAATTCTTGTCTTA 60.517 44.000 0.00 0.00 0.00 2.10
2493 2592 5.570320 TCCCTCCCAAAATTCTTGTCTTAG 58.430 41.667 0.00 0.00 0.00 2.18
2494 2593 5.312178 TCCCTCCCAAAATTCTTGTCTTAGA 59.688 40.000 0.00 0.00 0.00 2.10
2495 2594 6.011628 TCCCTCCCAAAATTCTTGTCTTAGAT 60.012 38.462 0.00 0.00 0.00 1.98
2496 2595 6.665248 CCCTCCCAAAATTCTTGTCTTAGATT 59.335 38.462 0.00 0.00 0.00 2.40
2497 2596 7.179160 CCCTCCCAAAATTCTTGTCTTAGATTT 59.821 37.037 0.00 0.00 0.00 2.17
2498 2597 8.031277 CCTCCCAAAATTCTTGTCTTAGATTTG 58.969 37.037 0.00 0.00 29.84 2.32
2499 2598 8.477419 TCCCAAAATTCTTGTCTTAGATTTGT 57.523 30.769 0.00 0.00 28.79 2.83
2500 2599 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2501 2600 7.814587 CCCAAAATTCTTGTCTTAGATTTGTCC 59.185 37.037 0.00 0.00 28.79 4.02
2502 2601 8.359642 CCAAAATTCTTGTCTTAGATTTGTCCA 58.640 33.333 0.00 0.00 28.79 4.02
2503 2602 9.748708 CAAAATTCTTGTCTTAGATTTGTCCAA 57.251 29.630 0.00 0.00 0.00 3.53
2541 2640 9.926158 TCAAGTCACGTTTTAATATTAGGTACA 57.074 29.630 0.00 0.00 0.00 2.90
2544 2643 9.538508 AGTCACGTTTTAATATTAGGTACATCC 57.461 33.333 0.00 0.00 0.00 3.51
2545 2644 8.482429 GTCACGTTTTAATATTAGGTACATCCG 58.518 37.037 0.00 0.00 41.99 4.18
2546 2645 8.196771 TCACGTTTTAATATTAGGTACATCCGT 58.803 33.333 0.00 0.00 41.99 4.69
2547 2646 9.462174 CACGTTTTAATATTAGGTACATCCGTA 57.538 33.333 0.00 0.00 41.99 4.02
2555 2654 9.970553 AATATTAGGTACATCCGTATCTAGACA 57.029 33.333 0.00 0.00 41.33 3.41
2556 2655 9.970553 ATATTAGGTACATCCGTATCTAGACAA 57.029 33.333 0.00 0.00 41.33 3.18
2557 2656 8.701908 ATTAGGTACATCCGTATCTAGACAAA 57.298 34.615 0.00 0.00 41.33 2.83
2558 2657 8.701908 TTAGGTACATCCGTATCTAGACAAAT 57.298 34.615 0.00 0.00 41.33 2.32
2559 2658 7.598759 AGGTACATCCGTATCTAGACAAATT 57.401 36.000 0.00 0.00 37.29 1.82
2560 2659 8.019656 AGGTACATCCGTATCTAGACAAATTT 57.980 34.615 0.00 0.00 37.29 1.82
2561 2660 9.139734 AGGTACATCCGTATCTAGACAAATTTA 57.860 33.333 0.00 0.00 37.29 1.40
2562 2661 9.754382 GGTACATCCGTATCTAGACAAATTTAA 57.246 33.333 0.00 0.00 0.00 1.52
2584 2683 9.699703 TTTAAGATAAAATTTTTGGAACGGAGG 57.300 29.630 9.06 0.00 0.00 4.30
2585 2684 6.280855 AGATAAAATTTTTGGAACGGAGGG 57.719 37.500 9.06 0.00 0.00 4.30
2586 2685 6.014012 AGATAAAATTTTTGGAACGGAGGGA 58.986 36.000 9.06 0.00 0.00 4.20
2587 2686 4.600692 AAAATTTTTGGAACGGAGGGAG 57.399 40.909 0.00 0.00 0.00 4.30
2588 2687 2.971901 ATTTTTGGAACGGAGGGAGT 57.028 45.000 0.00 0.00 0.00 3.85
2589 2688 4.376225 AATTTTTGGAACGGAGGGAGTA 57.624 40.909 0.00 0.00 0.00 2.59
2590 2689 4.586306 ATTTTTGGAACGGAGGGAGTAT 57.414 40.909 0.00 0.00 0.00 2.12
2591 2690 5.703730 ATTTTTGGAACGGAGGGAGTATA 57.296 39.130 0.00 0.00 0.00 1.47
2592 2691 5.502089 TTTTTGGAACGGAGGGAGTATAA 57.498 39.130 0.00 0.00 0.00 0.98
2593 2692 4.748277 TTTGGAACGGAGGGAGTATAAG 57.252 45.455 0.00 0.00 0.00 1.73
2594 2693 3.393426 TGGAACGGAGGGAGTATAAGT 57.607 47.619 0.00 0.00 0.00 2.24
2640 2740 7.291182 AGGACTAGTGGACTAAATATGAAGCAT 59.709 37.037 0.00 0.00 0.00 3.79
2732 2835 8.857694 AAAAAGACTATTTAGAAACGGATGGA 57.142 30.769 0.00 0.00 0.00 3.41
2733 2836 8.494016 AAAAGACTATTTAGAAACGGATGGAG 57.506 34.615 0.00 0.00 0.00 3.86
2734 2837 6.793505 AGACTATTTAGAAACGGATGGAGT 57.206 37.500 0.00 0.00 0.00 3.85
2738 2841 8.757982 ACTATTTAGAAACGGATGGAGTAGTA 57.242 34.615 0.00 0.00 0.00 1.82
2760 2863 6.870439 AGTACCTCCGTACAAAAATACTTGTC 59.130 38.462 3.47 0.00 46.25 3.18
2815 2918 2.332063 AGGTACATCCATTTGAGCGG 57.668 50.000 0.00 0.00 39.02 5.52
2816 2919 0.663153 GGTACATCCATTTGAGCGGC 59.337 55.000 0.00 0.00 35.97 6.53
2817 2920 1.378531 GTACATCCATTTGAGCGGCA 58.621 50.000 1.45 0.00 0.00 5.69
2818 2921 1.742831 GTACATCCATTTGAGCGGCAA 59.257 47.619 1.45 0.00 33.88 4.52
2819 2922 0.813184 ACATCCATTTGAGCGGCAAG 59.187 50.000 1.45 0.00 37.87 4.01
2820 2923 0.813184 CATCCATTTGAGCGGCAAGT 59.187 50.000 1.45 0.00 37.87 3.16
2821 2924 0.813184 ATCCATTTGAGCGGCAAGTG 59.187 50.000 1.45 9.71 42.11 3.16
2822 2925 0.537143 TCCATTTGAGCGGCAAGTGT 60.537 50.000 1.45 0.00 41.21 3.55
2823 2926 0.314935 CCATTTGAGCGGCAAGTGTT 59.685 50.000 1.45 0.00 41.21 3.32
2824 2927 1.666888 CCATTTGAGCGGCAAGTGTTC 60.667 52.381 1.45 0.00 41.21 3.18
2825 2928 1.267806 CATTTGAGCGGCAAGTGTTCT 59.732 47.619 1.45 0.00 38.84 3.01
2826 2929 2.248280 TTTGAGCGGCAAGTGTTCTA 57.752 45.000 1.45 0.00 37.87 2.10
2827 2930 1.795768 TTGAGCGGCAAGTGTTCTAG 58.204 50.000 1.45 0.00 31.55 2.43
2828 2931 0.966179 TGAGCGGCAAGTGTTCTAGA 59.034 50.000 1.45 0.00 0.00 2.43
2829 2932 1.343142 TGAGCGGCAAGTGTTCTAGAA 59.657 47.619 0.00 0.00 0.00 2.10
2830 2933 2.028112 TGAGCGGCAAGTGTTCTAGAAT 60.028 45.455 8.75 0.00 0.00 2.40
2831 2934 2.349886 GAGCGGCAAGTGTTCTAGAATG 59.650 50.000 8.75 3.94 0.00 2.67
2832 2935 1.398390 GCGGCAAGTGTTCTAGAATGG 59.602 52.381 8.75 0.00 0.00 3.16
2833 2936 2.935238 GCGGCAAGTGTTCTAGAATGGA 60.935 50.000 8.75 0.00 0.00 3.41
2834 2937 2.932614 CGGCAAGTGTTCTAGAATGGAG 59.067 50.000 8.75 0.00 0.00 3.86
2835 2938 3.368427 CGGCAAGTGTTCTAGAATGGAGA 60.368 47.826 8.75 0.00 0.00 3.71
2836 2939 4.187694 GGCAAGTGTTCTAGAATGGAGAG 58.812 47.826 8.75 0.00 0.00 3.20
2837 2940 4.323104 GGCAAGTGTTCTAGAATGGAGAGT 60.323 45.833 8.75 0.00 0.00 3.24
2838 2941 5.105310 GGCAAGTGTTCTAGAATGGAGAGTA 60.105 44.000 8.75 0.00 0.00 2.59
2839 2942 6.407525 GGCAAGTGTTCTAGAATGGAGAGTAT 60.408 42.308 8.75 0.00 0.00 2.12
2840 2943 7.201920 GGCAAGTGTTCTAGAATGGAGAGTATA 60.202 40.741 8.75 0.00 0.00 1.47
2841 2944 8.364142 GCAAGTGTTCTAGAATGGAGAGTATAT 58.636 37.037 8.75 0.00 0.00 0.86
2855 2958 6.652053 GGAGAGTATATAGTACTCCATCCGT 58.348 44.000 20.30 0.00 43.61 4.69
2856 2959 6.762661 GGAGAGTATATAGTACTCCATCCGTC 59.237 46.154 20.30 6.04 43.61 4.79
2857 2960 6.652053 AGAGTATATAGTACTCCATCCGTCC 58.348 44.000 0.00 0.00 43.61 4.79
2858 2961 5.426504 AGTATATAGTACTCCATCCGTCCG 58.573 45.833 0.00 0.00 0.00 4.79
2859 2962 2.945080 ATAGTACTCCATCCGTCCGA 57.055 50.000 0.00 0.00 0.00 4.55
2860 2963 2.715749 TAGTACTCCATCCGTCCGAA 57.284 50.000 0.00 0.00 0.00 4.30
2861 2964 1.843368 AGTACTCCATCCGTCCGAAA 58.157 50.000 0.00 0.00 0.00 3.46
2862 2965 2.173519 AGTACTCCATCCGTCCGAAAA 58.826 47.619 0.00 0.00 0.00 2.29
2863 2966 2.764572 AGTACTCCATCCGTCCGAAAAT 59.235 45.455 0.00 0.00 0.00 1.82
2864 2967 3.956199 AGTACTCCATCCGTCCGAAAATA 59.044 43.478 0.00 0.00 0.00 1.40
2865 2968 3.175109 ACTCCATCCGTCCGAAAATAC 57.825 47.619 0.00 0.00 0.00 1.89
2866 2969 2.764572 ACTCCATCCGTCCGAAAATACT 59.235 45.455 0.00 0.00 0.00 2.12
2867 2970 3.197116 ACTCCATCCGTCCGAAAATACTT 59.803 43.478 0.00 0.00 0.00 2.24
2868 2971 3.527533 TCCATCCGTCCGAAAATACTTG 58.472 45.455 0.00 0.00 0.00 3.16
2869 2972 3.055675 TCCATCCGTCCGAAAATACTTGT 60.056 43.478 0.00 0.00 0.00 3.16
2870 2973 3.308866 CCATCCGTCCGAAAATACTTGTC 59.691 47.826 0.00 0.00 0.00 3.18
2871 2974 2.598589 TCCGTCCGAAAATACTTGTCG 58.401 47.619 0.00 0.00 34.58 4.35
2872 2975 2.228582 TCCGTCCGAAAATACTTGTCGA 59.771 45.455 1.13 0.00 36.92 4.20
2873 2976 2.988493 CCGTCCGAAAATACTTGTCGAA 59.012 45.455 1.13 0.00 36.92 3.71
2874 2977 3.060363 CCGTCCGAAAATACTTGTCGAAG 59.940 47.826 1.13 0.00 36.92 3.79
2875 2978 3.916172 CGTCCGAAAATACTTGTCGAAGA 59.084 43.478 1.13 0.00 36.92 2.87
2876 2979 4.383649 CGTCCGAAAATACTTGTCGAAGAA 59.616 41.667 1.13 0.00 39.69 2.52
2877 2980 5.107760 CGTCCGAAAATACTTGTCGAAGAAA 60.108 40.000 1.13 0.00 39.69 2.52
2878 2981 6.400727 CGTCCGAAAATACTTGTCGAAGAAAT 60.401 38.462 1.13 0.00 39.69 2.17
2879 2982 6.736853 GTCCGAAAATACTTGTCGAAGAAATG 59.263 38.462 1.13 0.00 39.69 2.32
2880 2983 5.508224 CCGAAAATACTTGTCGAAGAAATGC 59.492 40.000 1.13 0.00 39.69 3.56
2881 2984 6.077197 CGAAAATACTTGTCGAAGAAATGCA 58.923 36.000 0.00 0.00 39.69 3.96
2882 2985 6.742718 CGAAAATACTTGTCGAAGAAATGCAT 59.257 34.615 0.00 0.00 39.69 3.96
2883 2986 7.902917 CGAAAATACTTGTCGAAGAAATGCATA 59.097 33.333 0.00 0.00 39.69 3.14
2884 2987 9.554724 GAAAATACTTGTCGAAGAAATGCATAA 57.445 29.630 0.00 0.00 39.69 1.90
2885 2988 9.906660 AAAATACTTGTCGAAGAAATGCATAAA 57.093 25.926 0.00 0.00 39.69 1.40
2886 2989 9.906660 AAATACTTGTCGAAGAAATGCATAAAA 57.093 25.926 0.00 0.00 39.69 1.52
2887 2990 9.906660 AATACTTGTCGAAGAAATGCATAAAAA 57.093 25.926 0.00 0.00 39.69 1.94
2889 2992 8.231304 ACTTGTCGAAGAAATGCATAAAAATG 57.769 30.769 0.00 0.00 39.69 2.32
2890 2993 7.329226 ACTTGTCGAAGAAATGCATAAAAATGG 59.671 33.333 0.00 0.00 39.69 3.16
2891 2994 6.918626 TGTCGAAGAAATGCATAAAAATGGA 58.081 32.000 0.00 0.00 39.69 3.41
2892 2995 7.546358 TGTCGAAGAAATGCATAAAAATGGAT 58.454 30.769 0.00 0.00 39.69 3.41
2893 2996 8.681806 TGTCGAAGAAATGCATAAAAATGGATA 58.318 29.630 0.00 0.00 39.69 2.59
2894 2997 9.683069 GTCGAAGAAATGCATAAAAATGGATAT 57.317 29.630 0.00 0.00 39.69 1.63
2950 3053 2.267188 TCGACAAGTATTTCCGGACG 57.733 50.000 1.83 0.27 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.377346 AGATTGATCGAGTGCGCTAAT 57.623 42.857 9.73 0.00 37.46 1.73
61 62 4.655963 CCATACCCCACTGAATTGATAGG 58.344 47.826 0.00 0.00 0.00 2.57
76 77 1.865865 CGTGTGTATCAGCCATACCC 58.134 55.000 1.84 0.00 37.18 3.69
144 145 2.219458 CATCACACTGGGATGAGATGC 58.781 52.381 15.29 0.00 43.80 3.91
274 275 0.461548 ATGGTGACGTGATCGATGCT 59.538 50.000 0.54 0.00 40.62 3.79
327 328 1.072391 TTGTACGTGTAGCATTGCCG 58.928 50.000 4.70 4.23 0.00 5.69
328 329 2.285602 CGATTGTACGTGTAGCATTGCC 60.286 50.000 4.70 0.00 0.00 4.52
329 330 2.601314 TCGATTGTACGTGTAGCATTGC 59.399 45.455 0.00 0.00 34.70 3.56
330 331 5.389642 AATCGATTGTACGTGTAGCATTG 57.610 39.130 10.50 0.00 34.70 2.82
331 332 6.532302 TGTAAATCGATTGTACGTGTAGCATT 59.468 34.615 12.25 0.00 34.70 3.56
332 333 6.037726 TGTAAATCGATTGTACGTGTAGCAT 58.962 36.000 12.25 0.00 34.70 3.79
333 334 5.400703 TGTAAATCGATTGTACGTGTAGCA 58.599 37.500 12.25 0.00 34.70 3.49
334 335 5.051907 CCTGTAAATCGATTGTACGTGTAGC 60.052 44.000 12.25 0.00 34.70 3.58
335 336 5.051907 GCCTGTAAATCGATTGTACGTGTAG 60.052 44.000 12.25 9.10 34.70 2.74
336 337 4.799949 GCCTGTAAATCGATTGTACGTGTA 59.200 41.667 12.25 0.00 34.70 2.90
337 338 3.615496 GCCTGTAAATCGATTGTACGTGT 59.385 43.478 12.25 0.00 34.70 4.49
338 339 3.863424 AGCCTGTAAATCGATTGTACGTG 59.137 43.478 12.25 11.27 34.70 4.49
339 340 4.119442 AGCCTGTAAATCGATTGTACGT 57.881 40.909 12.25 0.00 34.70 3.57
340 341 5.464965 AAAGCCTGTAAATCGATTGTACG 57.535 39.130 12.25 11.36 0.00 3.67
341 342 7.745015 TGTAAAAGCCTGTAAATCGATTGTAC 58.255 34.615 12.25 15.25 0.00 2.90
342 343 7.065324 CCTGTAAAAGCCTGTAAATCGATTGTA 59.935 37.037 12.25 3.88 0.00 2.41
343 344 6.128007 CCTGTAAAAGCCTGTAAATCGATTGT 60.128 38.462 12.25 4.85 0.00 2.71
344 345 6.093495 TCCTGTAAAAGCCTGTAAATCGATTG 59.907 38.462 12.25 0.00 0.00 2.67
345 346 6.177610 TCCTGTAAAAGCCTGTAAATCGATT 58.822 36.000 4.39 4.39 0.00 3.34
346 347 5.741011 TCCTGTAAAAGCCTGTAAATCGAT 58.259 37.500 0.00 0.00 0.00 3.59
347 348 5.155278 TCCTGTAAAAGCCTGTAAATCGA 57.845 39.130 0.00 0.00 0.00 3.59
348 349 5.220854 CCATCCTGTAAAAGCCTGTAAATCG 60.221 44.000 0.00 0.00 0.00 3.34
349 350 5.652452 ACCATCCTGTAAAAGCCTGTAAATC 59.348 40.000 0.00 0.00 0.00 2.17
350 351 5.580022 ACCATCCTGTAAAAGCCTGTAAAT 58.420 37.500 0.00 0.00 0.00 1.40
351 352 4.993028 ACCATCCTGTAAAAGCCTGTAAA 58.007 39.130 0.00 0.00 0.00 2.01
352 353 4.650972 ACCATCCTGTAAAAGCCTGTAA 57.349 40.909 0.00 0.00 0.00 2.41
353 354 4.650972 AACCATCCTGTAAAAGCCTGTA 57.349 40.909 0.00 0.00 0.00 2.74
354 355 3.525800 AACCATCCTGTAAAAGCCTGT 57.474 42.857 0.00 0.00 0.00 4.00
355 356 6.530019 AATTAACCATCCTGTAAAAGCCTG 57.470 37.500 0.00 0.00 0.00 4.85
356 357 7.234577 TCAAAATTAACCATCCTGTAAAAGCCT 59.765 33.333 0.00 0.00 0.00 4.58
357 358 7.382898 TCAAAATTAACCATCCTGTAAAAGCC 58.617 34.615 0.00 0.00 0.00 4.35
358 359 9.435688 AATCAAAATTAACCATCCTGTAAAAGC 57.564 29.630 0.00 0.00 0.00 3.51
360 361 9.717942 CCAATCAAAATTAACCATCCTGTAAAA 57.282 29.630 0.00 0.00 0.00 1.52
361 362 9.094578 TCCAATCAAAATTAACCATCCTGTAAA 57.905 29.630 0.00 0.00 0.00 2.01
362 363 8.527810 GTCCAATCAAAATTAACCATCCTGTAA 58.472 33.333 0.00 0.00 0.00 2.41
363 364 7.671819 TGTCCAATCAAAATTAACCATCCTGTA 59.328 33.333 0.00 0.00 0.00 2.74
364 365 6.496565 TGTCCAATCAAAATTAACCATCCTGT 59.503 34.615 0.00 0.00 0.00 4.00
365 366 6.934056 TGTCCAATCAAAATTAACCATCCTG 58.066 36.000 0.00 0.00 0.00 3.86
366 367 7.552050 TTGTCCAATCAAAATTAACCATCCT 57.448 32.000 0.00 0.00 0.00 3.24
367 368 9.533253 CTATTGTCCAATCAAAATTAACCATCC 57.467 33.333 0.00 0.00 32.50 3.51
368 369 9.533253 CCTATTGTCCAATCAAAATTAACCATC 57.467 33.333 0.00 0.00 32.50 3.51
369 370 9.045745 ACCTATTGTCCAATCAAAATTAACCAT 57.954 29.630 0.00 0.00 32.50 3.55
370 371 8.310382 CACCTATTGTCCAATCAAAATTAACCA 58.690 33.333 0.00 0.00 32.50 3.67
371 372 8.527810 TCACCTATTGTCCAATCAAAATTAACC 58.472 33.333 0.00 0.00 32.50 2.85
372 373 9.573133 CTCACCTATTGTCCAATCAAAATTAAC 57.427 33.333 0.00 0.00 32.50 2.01
373 374 8.250332 GCTCACCTATTGTCCAATCAAAATTAA 58.750 33.333 0.00 0.00 32.50 1.40
374 375 7.415095 CGCTCACCTATTGTCCAATCAAAATTA 60.415 37.037 0.00 0.00 32.50 1.40
375 376 6.625740 CGCTCACCTATTGTCCAATCAAAATT 60.626 38.462 0.00 0.00 32.50 1.82
376 377 5.163622 CGCTCACCTATTGTCCAATCAAAAT 60.164 40.000 0.00 0.00 32.50 1.82
377 378 4.155826 CGCTCACCTATTGTCCAATCAAAA 59.844 41.667 0.00 0.00 32.50 2.44
378 379 3.689161 CGCTCACCTATTGTCCAATCAAA 59.311 43.478 0.00 0.00 32.50 2.69
379 380 3.270027 CGCTCACCTATTGTCCAATCAA 58.730 45.455 0.00 0.00 32.50 2.57
380 381 2.419990 CCGCTCACCTATTGTCCAATCA 60.420 50.000 0.00 0.00 32.50 2.57
381 382 2.213499 CCGCTCACCTATTGTCCAATC 58.787 52.381 0.00 0.00 32.50 2.67
382 383 1.134098 CCCGCTCACCTATTGTCCAAT 60.134 52.381 0.00 0.00 34.93 3.16
383 384 0.251916 CCCGCTCACCTATTGTCCAA 59.748 55.000 0.00 0.00 0.00 3.53
384 385 1.622607 CCCCGCTCACCTATTGTCCA 61.623 60.000 0.00 0.00 0.00 4.02
385 386 1.146263 CCCCGCTCACCTATTGTCC 59.854 63.158 0.00 0.00 0.00 4.02
386 387 1.523938 GCCCCGCTCACCTATTGTC 60.524 63.158 0.00 0.00 0.00 3.18
387 388 2.590092 GCCCCGCTCACCTATTGT 59.410 61.111 0.00 0.00 0.00 2.71
388 389 2.588877 CGCCCCGCTCACCTATTG 60.589 66.667 0.00 0.00 0.00 1.90
389 390 3.861797 CCGCCCCGCTCACCTATT 61.862 66.667 0.00 0.00 0.00 1.73
416 417 4.566426 ACCTCTCTTCCCTGATTTTCAG 57.434 45.455 0.00 0.00 43.91 3.02
417 418 5.072741 CAAACCTCTCTTCCCTGATTTTCA 58.927 41.667 0.00 0.00 0.00 2.69
418 419 5.048434 CACAAACCTCTCTTCCCTGATTTTC 60.048 44.000 0.00 0.00 0.00 2.29
419 420 4.829492 CACAAACCTCTCTTCCCTGATTTT 59.171 41.667 0.00 0.00 0.00 1.82
420 421 4.104738 TCACAAACCTCTCTTCCCTGATTT 59.895 41.667 0.00 0.00 0.00 2.17
421 422 3.652869 TCACAAACCTCTCTTCCCTGATT 59.347 43.478 0.00 0.00 0.00 2.57
422 423 3.251484 TCACAAACCTCTCTTCCCTGAT 58.749 45.455 0.00 0.00 0.00 2.90
423 424 2.689658 TCACAAACCTCTCTTCCCTGA 58.310 47.619 0.00 0.00 0.00 3.86
424 425 3.710209 ATCACAAACCTCTCTTCCCTG 57.290 47.619 0.00 0.00 0.00 4.45
425 426 3.245052 CCAATCACAAACCTCTCTTCCCT 60.245 47.826 0.00 0.00 0.00 4.20
426 427 3.084786 CCAATCACAAACCTCTCTTCCC 58.915 50.000 0.00 0.00 0.00 3.97
427 428 3.756117 ACCAATCACAAACCTCTCTTCC 58.244 45.455 0.00 0.00 0.00 3.46
428 429 4.580580 ACAACCAATCACAAACCTCTCTTC 59.419 41.667 0.00 0.00 0.00 2.87
429 430 4.536765 ACAACCAATCACAAACCTCTCTT 58.463 39.130 0.00 0.00 0.00 2.85
430 431 4.170468 ACAACCAATCACAAACCTCTCT 57.830 40.909 0.00 0.00 0.00 3.10
431 432 4.918810 AACAACCAATCACAAACCTCTC 57.081 40.909 0.00 0.00 0.00 3.20
432 433 5.690865 TCTAACAACCAATCACAAACCTCT 58.309 37.500 0.00 0.00 0.00 3.69
433 434 6.381801 CATCTAACAACCAATCACAAACCTC 58.618 40.000 0.00 0.00 0.00 3.85
434 435 5.243730 CCATCTAACAACCAATCACAAACCT 59.756 40.000 0.00 0.00 0.00 3.50
435 436 5.242838 TCCATCTAACAACCAATCACAAACC 59.757 40.000 0.00 0.00 0.00 3.27
436 437 6.325919 TCCATCTAACAACCAATCACAAAC 57.674 37.500 0.00 0.00 0.00 2.93
437 438 6.775142 TCTTCCATCTAACAACCAATCACAAA 59.225 34.615 0.00 0.00 0.00 2.83
438 439 6.303054 TCTTCCATCTAACAACCAATCACAA 58.697 36.000 0.00 0.00 0.00 3.33
439 440 5.875224 TCTTCCATCTAACAACCAATCACA 58.125 37.500 0.00 0.00 0.00 3.58
440 441 6.623767 GCTTCTTCCATCTAACAACCAATCAC 60.624 42.308 0.00 0.00 0.00 3.06
441 442 5.415701 GCTTCTTCCATCTAACAACCAATCA 59.584 40.000 0.00 0.00 0.00 2.57
442 443 5.447818 CGCTTCTTCCATCTAACAACCAATC 60.448 44.000 0.00 0.00 0.00 2.67
443 444 4.396166 CGCTTCTTCCATCTAACAACCAAT 59.604 41.667 0.00 0.00 0.00 3.16
444 445 3.751175 CGCTTCTTCCATCTAACAACCAA 59.249 43.478 0.00 0.00 0.00 3.67
445 446 3.244422 ACGCTTCTTCCATCTAACAACCA 60.244 43.478 0.00 0.00 0.00 3.67
446 447 3.125316 CACGCTTCTTCCATCTAACAACC 59.875 47.826 0.00 0.00 0.00 3.77
447 448 3.746492 ACACGCTTCTTCCATCTAACAAC 59.254 43.478 0.00 0.00 0.00 3.32
448 449 4.002906 ACACGCTTCTTCCATCTAACAA 57.997 40.909 0.00 0.00 0.00 2.83
449 450 3.678056 ACACGCTTCTTCCATCTAACA 57.322 42.857 0.00 0.00 0.00 2.41
450 451 6.476243 TTTTACACGCTTCTTCCATCTAAC 57.524 37.500 0.00 0.00 0.00 2.34
451 452 6.347079 CGTTTTTACACGCTTCTTCCATCTAA 60.347 38.462 0.00 0.00 32.43 2.10
452 453 5.119588 CGTTTTTACACGCTTCTTCCATCTA 59.880 40.000 0.00 0.00 32.43 1.98
453 454 4.084013 CGTTTTTACACGCTTCTTCCATCT 60.084 41.667 0.00 0.00 32.43 2.90
454 455 4.148891 CGTTTTTACACGCTTCTTCCATC 58.851 43.478 0.00 0.00 32.43 3.51
455 456 3.562557 ACGTTTTTACACGCTTCTTCCAT 59.437 39.130 0.00 0.00 44.37 3.41
456 457 2.937799 ACGTTTTTACACGCTTCTTCCA 59.062 40.909 0.00 0.00 44.37 3.53
457 458 3.242511 ACACGTTTTTACACGCTTCTTCC 60.243 43.478 0.00 0.00 44.37 3.46
458 459 3.931824 ACACGTTTTTACACGCTTCTTC 58.068 40.909 0.00 0.00 44.37 2.87
459 460 5.063817 ACTTACACGTTTTTACACGCTTCTT 59.936 36.000 0.00 0.00 44.37 2.52
460 461 4.567959 ACTTACACGTTTTTACACGCTTCT 59.432 37.500 0.00 0.00 44.37 2.85
461 462 4.825400 ACTTACACGTTTTTACACGCTTC 58.175 39.130 0.00 0.00 44.37 3.86
462 463 4.567959 AGACTTACACGTTTTTACACGCTT 59.432 37.500 0.00 0.00 44.37 4.68
463 464 4.114794 AGACTTACACGTTTTTACACGCT 58.885 39.130 0.00 0.00 44.37 5.07
464 465 4.442350 AGACTTACACGTTTTTACACGC 57.558 40.909 0.00 0.00 44.37 5.34
465 466 6.242829 ACAAAGACTTACACGTTTTTACACG 58.757 36.000 0.00 0.00 46.04 4.49
466 467 9.150653 CATACAAAGACTTACACGTTTTTACAC 57.849 33.333 0.00 0.00 0.00 2.90
467 468 8.881743 ACATACAAAGACTTACACGTTTTTACA 58.118 29.630 0.00 0.00 0.00 2.41
468 469 9.361712 GACATACAAAGACTTACACGTTTTTAC 57.638 33.333 0.00 0.00 0.00 2.01
469 470 9.316730 AGACATACAAAGACTTACACGTTTTTA 57.683 29.630 0.00 0.00 0.00 1.52
470 471 8.205131 AGACATACAAAGACTTACACGTTTTT 57.795 30.769 0.00 0.00 0.00 1.94
471 472 7.781548 AGACATACAAAGACTTACACGTTTT 57.218 32.000 0.00 0.00 0.00 2.43
472 473 7.115947 GCTAGACATACAAAGACTTACACGTTT 59.884 37.037 0.00 0.00 0.00 3.60
473 474 6.585322 GCTAGACATACAAAGACTTACACGTT 59.415 38.462 0.00 0.00 0.00 3.99
474 475 6.091437 GCTAGACATACAAAGACTTACACGT 58.909 40.000 0.00 0.00 0.00 4.49
475 476 6.090783 TGCTAGACATACAAAGACTTACACG 58.909 40.000 0.00 0.00 0.00 4.49
476 477 8.480643 AATGCTAGACATACAAAGACTTACAC 57.519 34.615 0.00 0.00 38.34 2.90
477 478 9.502091 AAAATGCTAGACATACAAAGACTTACA 57.498 29.630 0.00 0.00 38.34 2.41
480 481 9.066892 TCAAAAATGCTAGACATACAAAGACTT 57.933 29.630 0.00 0.00 38.34 3.01
481 482 8.621532 TCAAAAATGCTAGACATACAAAGACT 57.378 30.769 0.00 0.00 38.34 3.24
482 483 9.282247 CATCAAAAATGCTAGACATACAAAGAC 57.718 33.333 0.00 0.00 38.34 3.01
483 484 7.970061 GCATCAAAAATGCTAGACATACAAAGA 59.030 33.333 0.00 0.00 38.34 2.52
484 485 8.112099 GCATCAAAAATGCTAGACATACAAAG 57.888 34.615 0.00 0.00 38.34 2.77
497 498 4.147653 GCATATGACGAGCATCAAAAATGC 59.852 41.667 6.97 1.80 44.85 3.56
498 499 4.377738 CGCATATGACGAGCATCAAAAATG 59.622 41.667 6.97 0.00 38.44 2.32
499 500 4.530388 CGCATATGACGAGCATCAAAAAT 58.470 39.130 6.97 0.00 38.44 1.82
500 501 3.788466 GCGCATATGACGAGCATCAAAAA 60.788 43.478 19.23 0.00 38.44 1.94
501 502 2.286359 GCGCATATGACGAGCATCAAAA 60.286 45.455 19.23 0.00 38.44 2.44
502 503 1.261354 GCGCATATGACGAGCATCAAA 59.739 47.619 19.23 0.00 38.44 2.69
503 504 0.861185 GCGCATATGACGAGCATCAA 59.139 50.000 19.23 0.00 38.44 2.57
504 505 1.277495 CGCGCATATGACGAGCATCA 61.277 55.000 19.23 0.00 38.44 3.07
505 506 1.278172 ACGCGCATATGACGAGCATC 61.278 55.000 21.02 5.28 38.44 3.91
506 507 1.278172 GACGCGCATATGACGAGCAT 61.278 55.000 21.02 3.86 41.08 3.79
507 508 1.944184 GACGCGCATATGACGAGCA 60.944 57.895 21.02 0.00 33.36 4.26
508 509 1.944184 TGACGCGCATATGACGAGC 60.944 57.895 21.02 12.36 33.36 5.03
509 510 0.865639 TGTGACGCGCATATGACGAG 60.866 55.000 21.02 18.82 36.35 4.18
510 511 1.137459 GTGTGACGCGCATATGACGA 61.137 55.000 21.02 1.75 0.00 4.20
511 512 1.269810 GTGTGACGCGCATATGACG 59.730 57.895 5.73 11.75 0.00 4.35
512 513 1.269810 CGTGTGACGCGCATATGAC 59.730 57.895 5.73 0.00 33.65 3.06
513 514 3.686863 CGTGTGACGCGCATATGA 58.313 55.556 5.73 0.00 33.65 2.15
586 590 1.401905 GTGGATTTTAGCTGCTTCCCG 59.598 52.381 7.79 0.00 0.00 5.14
613 618 4.881440 GGGGCAGCGATGATGGCA 62.881 66.667 4.02 0.00 46.20 4.92
830 857 1.367659 CAGAGAGTGGCAGCTTTAGC 58.632 55.000 0.00 0.00 42.49 3.09
831 858 1.367659 GCAGAGAGTGGCAGCTTTAG 58.632 55.000 0.00 0.00 0.00 1.85
832 859 0.390340 CGCAGAGAGTGGCAGCTTTA 60.390 55.000 0.00 0.00 0.00 1.85
833 860 1.670406 CGCAGAGAGTGGCAGCTTT 60.670 57.895 0.00 0.00 0.00 3.51
834 861 2.047465 CGCAGAGAGTGGCAGCTT 60.047 61.111 0.00 0.00 0.00 3.74
835 862 3.293901 GACGCAGAGAGTGGCAGCT 62.294 63.158 0.00 0.00 35.19 4.24
836 863 2.813042 GACGCAGAGAGTGGCAGC 60.813 66.667 0.00 0.00 35.19 5.25
840 867 0.109365 CAGACAGACGCAGAGAGTGG 60.109 60.000 0.00 0.00 0.00 4.00
852 879 0.615850 TCGAGAGAGAGCCAGACAGA 59.384 55.000 0.00 0.00 34.84 3.41
913 971 5.814764 AGTCGATCTGTACTATGTTTCGT 57.185 39.130 0.00 0.00 0.00 3.85
915 973 7.133513 CCTGTAGTCGATCTGTACTATGTTTC 58.866 42.308 0.00 0.00 31.25 2.78
937 996 3.112075 CCTGTGCGTGCGTACCTG 61.112 66.667 10.01 3.77 0.00 4.00
961 1020 0.179034 CCTCAGCCCTGCAGGATAAC 60.179 60.000 34.91 19.24 38.24 1.89
963 1022 0.762082 CTCCTCAGCCCTGCAGGATA 60.762 60.000 34.91 14.50 36.79 2.59
965 1024 2.686470 CTCCTCAGCCCTGCAGGA 60.686 66.667 34.91 13.33 38.24 3.86
967 1026 1.834856 TTCACTCCTCAGCCCTGCAG 61.835 60.000 6.78 6.78 0.00 4.41
968 1027 1.834856 CTTCACTCCTCAGCCCTGCA 61.835 60.000 0.00 0.00 0.00 4.41
969 1028 1.078567 CTTCACTCCTCAGCCCTGC 60.079 63.158 0.00 0.00 0.00 4.85
994 1053 1.910580 AAGGTTCCCGCCATGACGAT 61.911 55.000 1.83 0.00 34.06 3.73
1347 1421 2.445845 CTGGACCCCATCGGCCTA 60.446 66.667 0.00 0.00 30.82 3.93
1544 1618 1.999735 CGGTATTACCTGTGTGTGCAG 59.000 52.381 11.05 0.00 35.66 4.41
1545 1619 1.345089 ACGGTATTACCTGTGTGTGCA 59.655 47.619 11.05 0.00 35.66 4.57
1546 1620 2.088950 ACGGTATTACCTGTGTGTGC 57.911 50.000 11.05 0.00 35.66 4.57
1547 1621 3.173599 CGTACGGTATTACCTGTGTGTG 58.826 50.000 7.57 0.00 35.66 3.82
1548 1622 2.819608 ACGTACGGTATTACCTGTGTGT 59.180 45.455 21.06 9.81 35.66 3.72
1549 1623 3.492421 ACGTACGGTATTACCTGTGTG 57.508 47.619 21.06 9.32 35.66 3.82
1575 1653 4.843220 ATATAAGGCGTACGTAGCAAGT 57.157 40.909 17.90 0.43 36.08 3.16
1593 1671 3.990092 TCGATCGCAAAGGCAAGTATAT 58.010 40.909 11.09 0.00 41.24 0.86
1599 1677 2.005995 CGATCGATCGCAAAGGCAA 58.994 52.632 32.34 0.00 43.84 4.52
1620 1698 1.858458 GCATGCATGTACACGTACGAT 59.142 47.619 26.79 12.10 38.85 3.73
1698 1791 2.359354 TTGCGCCCGTTGCAGTAT 60.359 55.556 4.18 0.00 44.28 2.12
1848 1941 2.120718 ACCCTCTCGAACCTGGCT 59.879 61.111 0.00 0.00 0.00 4.75
2040 2139 6.942005 TCACATGACCAAGAATCAAACATAGT 59.058 34.615 0.00 0.00 0.00 2.12
2041 2140 7.381766 TCACATGACCAAGAATCAAACATAG 57.618 36.000 0.00 0.00 0.00 2.23
2042 2141 7.757941 TTCACATGACCAAGAATCAAACATA 57.242 32.000 0.00 0.00 0.00 2.29
2043 2142 6.653526 TTCACATGACCAAGAATCAAACAT 57.346 33.333 0.00 0.00 0.00 2.71
2044 2143 6.096705 AGTTTCACATGACCAAGAATCAAACA 59.903 34.615 0.00 0.00 0.00 2.83
2045 2144 6.418819 CAGTTTCACATGACCAAGAATCAAAC 59.581 38.462 0.00 0.00 0.00 2.93
2046 2145 6.461370 CCAGTTTCACATGACCAAGAATCAAA 60.461 38.462 0.00 0.00 0.00 2.69
2047 2146 5.009911 CCAGTTTCACATGACCAAGAATCAA 59.990 40.000 0.00 0.00 0.00 2.57
2059 2158 0.518636 CAGACCGCCAGTTTCACATG 59.481 55.000 0.00 0.00 0.00 3.21
2168 2267 9.625747 TTGCTCTGTATGTAATCCATATTGAAA 57.374 29.630 0.00 0.00 38.29 2.69
2169 2268 9.625747 TTTGCTCTGTATGTAATCCATATTGAA 57.374 29.630 0.00 0.00 38.29 2.69
2170 2269 9.625747 TTTTGCTCTGTATGTAATCCATATTGA 57.374 29.630 0.00 0.00 38.29 2.57
2174 2273 9.625747 TTCATTTTGCTCTGTATGTAATCCATA 57.374 29.630 0.00 0.00 34.86 2.74
2175 2274 8.408601 GTTCATTTTGCTCTGTATGTAATCCAT 58.591 33.333 0.00 0.00 37.58 3.41
2176 2275 7.413988 CGTTCATTTTGCTCTGTATGTAATCCA 60.414 37.037 0.00 0.00 0.00 3.41
2177 2276 6.907212 CGTTCATTTTGCTCTGTATGTAATCC 59.093 38.462 0.00 0.00 0.00 3.01
2178 2277 7.684670 TCGTTCATTTTGCTCTGTATGTAATC 58.315 34.615 0.00 0.00 0.00 1.75
2179 2278 7.609760 TCGTTCATTTTGCTCTGTATGTAAT 57.390 32.000 0.00 0.00 0.00 1.89
2181 2280 7.609760 ATTCGTTCATTTTGCTCTGTATGTA 57.390 32.000 0.00 0.00 0.00 2.29
2182 2281 5.940192 TTCGTTCATTTTGCTCTGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
2185 2284 7.801315 GTGTAAATTCGTTCATTTTGCTCTGTA 59.199 33.333 0.00 0.00 0.00 2.74
2187 2286 6.857964 AGTGTAAATTCGTTCATTTTGCTCTG 59.142 34.615 0.00 0.00 0.00 3.35
2189 2288 7.078228 AGAGTGTAAATTCGTTCATTTTGCTC 58.922 34.615 0.00 0.00 0.00 4.26
2190 2289 6.970484 AGAGTGTAAATTCGTTCATTTTGCT 58.030 32.000 0.00 0.00 0.00 3.91
2191 2290 8.722342 TTAGAGTGTAAATTCGTTCATTTTGC 57.278 30.769 0.00 0.00 0.00 3.68
2261 2360 9.549078 CCCTCTGTTCCTAAATATAAGTCTTTC 57.451 37.037 0.00 0.00 0.00 2.62
2262 2361 9.280456 TCCCTCTGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
2263 2362 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
2264 2363 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
2265 2364 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
2266 2365 9.900112 ATACTCCCTCTGTTCCTAAATATAAGT 57.100 33.333 0.00 0.00 0.00 2.24
2275 2374 7.510675 AAAAATGATACTCCCTCTGTTCCTA 57.489 36.000 0.00 0.00 0.00 2.94
2276 2375 6.394345 AAAAATGATACTCCCTCTGTTCCT 57.606 37.500 0.00 0.00 0.00 3.36
2279 2378 9.014297 CAACTTAAAAATGATACTCCCTCTGTT 57.986 33.333 0.00 0.00 0.00 3.16
2285 2384 7.328493 GCACAACAACTTAAAAATGATACTCCC 59.672 37.037 0.00 0.00 0.00 4.30
2287 2386 8.690840 GTGCACAACAACTTAAAAATGATACTC 58.309 33.333 13.17 0.00 0.00 2.59
2296 2395 4.792521 ACCAGTGCACAACAACTTAAAA 57.207 36.364 21.04 0.00 0.00 1.52
2305 2404 2.161609 GCTTACCATACCAGTGCACAAC 59.838 50.000 21.04 0.00 0.00 3.32
2344 2443 3.910627 ACACAAGTCTAGAAGGGGAACAT 59.089 43.478 0.00 0.00 0.00 2.71
2378 2477 6.797852 TGCTCAAATGCGTTGGTGTTTACC 62.798 45.833 0.00 0.00 40.69 2.85
2379 2478 2.724174 GCTCAAATGCGTTGGTGTTTAC 59.276 45.455 0.00 0.00 37.85 2.01
2449 2548 5.369993 GGGAGGGAGTATTTAGGAACAGAAT 59.630 44.000 0.00 0.00 0.00 2.40
2452 2551 4.299485 AGGGAGGGAGTATTTAGGAACAG 58.701 47.826 0.00 0.00 0.00 3.16
2453 2552 4.296056 GAGGGAGGGAGTATTTAGGAACA 58.704 47.826 0.00 0.00 0.00 3.18
2465 2564 1.925959 AGAATTTTGGGAGGGAGGGAG 59.074 52.381 0.00 0.00 0.00 4.30
2466 2565 2.042979 CAAGAATTTTGGGAGGGAGGGA 59.957 50.000 0.00 0.00 0.00 4.20
2467 2566 2.225369 ACAAGAATTTTGGGAGGGAGGG 60.225 50.000 5.68 0.00 0.00 4.30
2468 2567 3.092301 GACAAGAATTTTGGGAGGGAGG 58.908 50.000 5.68 0.00 0.00 4.30
2469 2568 4.039603 AGACAAGAATTTTGGGAGGGAG 57.960 45.455 5.68 0.00 0.00 4.30
2470 2569 4.469469 AAGACAAGAATTTTGGGAGGGA 57.531 40.909 5.68 0.00 0.00 4.20
2471 2570 5.570320 TCTAAGACAAGAATTTTGGGAGGG 58.430 41.667 5.68 0.00 0.00 4.30
2472 2571 7.709149 AATCTAAGACAAGAATTTTGGGAGG 57.291 36.000 5.68 0.00 0.00 4.30
2473 2572 8.579863 ACAAATCTAAGACAAGAATTTTGGGAG 58.420 33.333 0.00 0.00 33.04 4.30
2474 2573 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2475 2574 7.814587 GGACAAATCTAAGACAAGAATTTTGGG 59.185 37.037 0.00 0.00 33.04 4.12
2476 2575 8.359642 TGGACAAATCTAAGACAAGAATTTTGG 58.640 33.333 0.00 0.00 33.04 3.28
2477 2576 9.748708 TTGGACAAATCTAAGACAAGAATTTTG 57.251 29.630 0.00 0.00 34.13 2.44
2483 2582 9.177608 CCATATTTGGACAAATCTAAGACAAGA 57.822 33.333 13.07 0.00 46.92 3.02
2500 2599 8.777865 ACGTGACTTGATATATCCATATTTGG 57.222 34.615 10.25 0.00 45.15 3.28
2515 2614 9.926158 TGTACCTAATATTAAAACGTGACTTGA 57.074 29.630 0.00 0.00 0.00 3.02
2518 2617 9.538508 GGATGTACCTAATATTAAAACGTGACT 57.461 33.333 0.00 0.00 35.41 3.41
2519 2618 8.482429 CGGATGTACCTAATATTAAAACGTGAC 58.518 37.037 0.00 0.00 36.31 3.67
2520 2619 8.196771 ACGGATGTACCTAATATTAAAACGTGA 58.803 33.333 0.00 0.00 36.31 4.35
2521 2620 8.356533 ACGGATGTACCTAATATTAAAACGTG 57.643 34.615 0.00 0.00 36.31 4.49
2529 2628 9.970553 TGTCTAGATACGGATGTACCTAATATT 57.029 33.333 0.00 0.00 36.31 1.28
2530 2629 9.970553 TTGTCTAGATACGGATGTACCTAATAT 57.029 33.333 0.00 0.00 36.31 1.28
2531 2630 9.797642 TTTGTCTAGATACGGATGTACCTAATA 57.202 33.333 0.00 0.00 36.31 0.98
2532 2631 8.701908 TTTGTCTAGATACGGATGTACCTAAT 57.298 34.615 0.00 0.00 36.31 1.73
2533 2632 8.701908 ATTTGTCTAGATACGGATGTACCTAA 57.298 34.615 0.00 0.00 36.31 2.69
2534 2633 8.701908 AATTTGTCTAGATACGGATGTACCTA 57.298 34.615 0.00 0.00 36.31 3.08
2535 2634 7.598759 AATTTGTCTAGATACGGATGTACCT 57.401 36.000 0.00 0.00 36.31 3.08
2536 2635 9.754382 TTAAATTTGTCTAGATACGGATGTACC 57.246 33.333 0.00 0.00 32.26 3.34
2558 2657 9.699703 CCTCCGTTCCAAAAATTTTATCTTAAA 57.300 29.630 3.34 0.00 0.00 1.52
2559 2658 8.308207 CCCTCCGTTCCAAAAATTTTATCTTAA 58.692 33.333 3.34 0.00 0.00 1.85
2560 2659 7.670559 TCCCTCCGTTCCAAAAATTTTATCTTA 59.329 33.333 3.34 0.00 0.00 2.10
2561 2660 6.495526 TCCCTCCGTTCCAAAAATTTTATCTT 59.504 34.615 3.34 0.00 0.00 2.40
2562 2661 6.014012 TCCCTCCGTTCCAAAAATTTTATCT 58.986 36.000 3.34 0.00 0.00 1.98
2563 2662 6.071560 ACTCCCTCCGTTCCAAAAATTTTATC 60.072 38.462 3.34 0.00 0.00 1.75
2564 2663 5.778241 ACTCCCTCCGTTCCAAAAATTTTAT 59.222 36.000 3.34 0.00 0.00 1.40
2565 2664 5.141910 ACTCCCTCCGTTCCAAAAATTTTA 58.858 37.500 3.34 0.00 0.00 1.52
2566 2665 3.964688 ACTCCCTCCGTTCCAAAAATTTT 59.035 39.130 0.00 0.00 0.00 1.82
2567 2666 3.572642 ACTCCCTCCGTTCCAAAAATTT 58.427 40.909 0.00 0.00 0.00 1.82
2568 2667 3.238788 ACTCCCTCCGTTCCAAAAATT 57.761 42.857 0.00 0.00 0.00 1.82
2569 2668 2.971901 ACTCCCTCCGTTCCAAAAAT 57.028 45.000 0.00 0.00 0.00 1.82
2570 2669 5.013391 ACTTATACTCCCTCCGTTCCAAAAA 59.987 40.000 0.00 0.00 0.00 1.94
2571 2670 4.533311 ACTTATACTCCCTCCGTTCCAAAA 59.467 41.667 0.00 0.00 0.00 2.44
2572 2671 4.098894 ACTTATACTCCCTCCGTTCCAAA 58.901 43.478 0.00 0.00 0.00 3.28
2573 2672 3.716431 ACTTATACTCCCTCCGTTCCAA 58.284 45.455 0.00 0.00 0.00 3.53
2574 2673 3.393426 ACTTATACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
2575 2674 4.750021 AAACTTATACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
2633 2733 9.534565 GAGTGTAGATTCACTTATTATGCTTCA 57.465 33.333 0.98 0.00 46.81 3.02
2634 2734 9.757227 AGAGTGTAGATTCACTTATTATGCTTC 57.243 33.333 0.98 0.00 46.81 3.86
2677 2777 9.608617 GATTTCAATGCAGACTACATATGAATG 57.391 33.333 10.38 1.46 39.17 2.67
2678 2778 9.570468 AGATTTCAATGCAGACTACATATGAAT 57.430 29.630 10.38 0.00 31.23 2.57
2681 2781 8.604640 AGAGATTTCAATGCAGACTACATATG 57.395 34.615 0.00 0.00 0.00 1.78
2709 2809 7.621796 ACTCCATCCGTTTCTAAATAGTCTTT 58.378 34.615 0.00 0.00 0.00 2.52
2738 2841 4.687483 CGACAAGTATTTTTGTACGGAGGT 59.313 41.667 0.00 0.00 41.15 3.85
2743 2846 8.649810 ATTTAAGCGACAAGTATTTTTGTACG 57.350 30.769 0.00 0.00 41.15 3.67
2789 2892 6.346096 GCTCAAATGGATGTACCTAACACTA 58.654 40.000 0.00 0.00 42.09 2.74
2792 2895 4.188462 CGCTCAAATGGATGTACCTAACA 58.812 43.478 0.00 0.00 43.86 2.41
2793 2896 3.560068 CCGCTCAAATGGATGTACCTAAC 59.440 47.826 0.00 0.00 39.86 2.34
2794 2897 3.804036 CCGCTCAAATGGATGTACCTAA 58.196 45.455 0.00 0.00 39.86 2.69
2798 2901 1.378531 TGCCGCTCAAATGGATGTAC 58.621 50.000 0.00 0.00 0.00 2.90
2801 2904 0.813184 ACTTGCCGCTCAAATGGATG 59.187 50.000 0.00 0.00 33.65 3.51
2805 2908 1.267806 AGAACACTTGCCGCTCAAATG 59.732 47.619 0.00 0.00 37.86 2.32
2815 2918 4.826556 ACTCTCCATTCTAGAACACTTGC 58.173 43.478 7.48 0.00 0.00 4.01
2831 2934 6.652053 ACGGATGGAGTACTATATACTCTCC 58.348 44.000 12.52 11.32 42.54 3.71
2832 2935 6.762661 GGACGGATGGAGTACTATATACTCTC 59.237 46.154 12.52 4.93 42.54 3.20
2833 2936 6.629963 CGGACGGATGGAGTACTATATACTCT 60.630 46.154 12.52 0.00 42.54 3.24
2834 2937 5.523188 CGGACGGATGGAGTACTATATACTC 59.477 48.000 0.00 5.67 42.28 2.59
2835 2938 5.188555 TCGGACGGATGGAGTACTATATACT 59.811 44.000 0.00 0.00 0.00 2.12
2836 2939 5.423015 TCGGACGGATGGAGTACTATATAC 58.577 45.833 0.00 0.00 0.00 1.47
2837 2940 5.682234 TCGGACGGATGGAGTACTATATA 57.318 43.478 0.00 0.00 0.00 0.86
2838 2941 4.564782 TCGGACGGATGGAGTACTATAT 57.435 45.455 0.00 0.00 0.00 0.86
2839 2942 4.356405 TTCGGACGGATGGAGTACTATA 57.644 45.455 0.00 0.00 0.00 1.31
2840 2943 2.945080 TCGGACGGATGGAGTACTAT 57.055 50.000 0.00 0.00 0.00 2.12
2841 2944 2.715749 TTCGGACGGATGGAGTACTA 57.284 50.000 0.00 0.00 0.00 1.82
2842 2945 1.843368 TTTCGGACGGATGGAGTACT 58.157 50.000 0.00 0.00 0.00 2.73
2843 2946 2.660189 TTTTCGGACGGATGGAGTAC 57.340 50.000 0.00 0.00 0.00 2.73
2844 2947 3.956199 AGTATTTTCGGACGGATGGAGTA 59.044 43.478 0.00 0.00 0.00 2.59
2845 2948 2.764572 AGTATTTTCGGACGGATGGAGT 59.235 45.455 0.00 0.00 0.00 3.85
2846 2949 3.454371 AGTATTTTCGGACGGATGGAG 57.546 47.619 0.00 0.00 0.00 3.86
2847 2950 3.055675 ACAAGTATTTTCGGACGGATGGA 60.056 43.478 0.00 0.00 0.00 3.41
2848 2951 3.267483 ACAAGTATTTTCGGACGGATGG 58.733 45.455 0.00 0.00 0.00 3.51
2849 2952 3.000078 CGACAAGTATTTTCGGACGGATG 60.000 47.826 0.00 0.00 0.00 3.51
2850 2953 3.119388 TCGACAAGTATTTTCGGACGGAT 60.119 43.478 0.00 0.00 33.50 4.18
2851 2954 2.228582 TCGACAAGTATTTTCGGACGGA 59.771 45.455 0.00 0.00 33.50 4.69
2852 2955 2.598589 TCGACAAGTATTTTCGGACGG 58.401 47.619 0.00 0.00 33.50 4.79
2853 2956 3.916172 TCTTCGACAAGTATTTTCGGACG 59.084 43.478 0.00 0.00 33.50 4.79
2854 2957 5.834239 TTCTTCGACAAGTATTTTCGGAC 57.166 39.130 0.00 0.00 33.50 4.79
2855 2958 6.619874 GCATTTCTTCGACAAGTATTTTCGGA 60.620 38.462 0.00 0.00 33.50 4.55
2856 2959 5.508224 GCATTTCTTCGACAAGTATTTTCGG 59.492 40.000 0.00 0.00 33.50 4.30
2857 2960 6.077197 TGCATTTCTTCGACAAGTATTTTCG 58.923 36.000 0.00 0.00 0.00 3.46
2858 2961 9.554724 TTATGCATTTCTTCGACAAGTATTTTC 57.445 29.630 3.54 0.00 0.00 2.29
2859 2962 9.906660 TTTATGCATTTCTTCGACAAGTATTTT 57.093 25.926 3.54 0.00 0.00 1.82
2860 2963 9.906660 TTTTATGCATTTCTTCGACAAGTATTT 57.093 25.926 3.54 0.00 0.00 1.40
2861 2964 9.906660 TTTTTATGCATTTCTTCGACAAGTATT 57.093 25.926 3.54 0.00 0.00 1.89
2863 2966 9.340695 CATTTTTATGCATTTCTTCGACAAGTA 57.659 29.630 3.54 0.00 0.00 2.24
2864 2967 7.329226 CCATTTTTATGCATTTCTTCGACAAGT 59.671 33.333 3.54 0.00 0.00 3.16
2865 2968 7.541783 TCCATTTTTATGCATTTCTTCGACAAG 59.458 33.333 3.54 0.00 0.00 3.16
2866 2969 7.374272 TCCATTTTTATGCATTTCTTCGACAA 58.626 30.769 3.54 0.00 0.00 3.18
2867 2970 6.918626 TCCATTTTTATGCATTTCTTCGACA 58.081 32.000 3.54 0.00 0.00 4.35
2868 2971 7.992180 ATCCATTTTTATGCATTTCTTCGAC 57.008 32.000 3.54 0.00 0.00 4.20
2927 3030 4.084433 CGTCCGGAAATACTTGTCGAAAAA 60.084 41.667 5.23 0.00 0.00 1.94
2928 3031 3.429543 CGTCCGGAAATACTTGTCGAAAA 59.570 43.478 5.23 0.00 0.00 2.29
2929 3032 2.988493 CGTCCGGAAATACTTGTCGAAA 59.012 45.455 5.23 0.00 0.00 3.46
2930 3033 2.598589 CGTCCGGAAATACTTGTCGAA 58.401 47.619 5.23 0.00 0.00 3.71
2931 3034 1.135315 CCGTCCGGAAATACTTGTCGA 60.135 52.381 5.23 0.00 37.50 4.20
2932 3035 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
2933 3036 2.165030 TCTCCGTCCGGAAATACTTGTC 59.835 50.000 5.23 0.00 44.66 3.18
2934 3037 2.165845 CTCTCCGTCCGGAAATACTTGT 59.834 50.000 5.23 0.00 44.66 3.16
2935 3038 2.426024 TCTCTCCGTCCGGAAATACTTG 59.574 50.000 5.23 0.00 44.66 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.