>input_sequence_64513
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------------------ATGGCGGGAACCTTACGTGCGGCAGTGGCCGCCTCGCCGCCGC---------------CGCC
GTCGCCGCTCCCGCCATCCAGGGGCGCCACCGCGAGCGGCGGCATCCCGTGGCTGCTCAGGAAGCGCGCCAGCAAGGTGC
GCCACGGCCCGCCGCTCGGCGGGCAAGAACCTGACGTCCACGATGAGGTGGAACTGGAAGACGAGGGAGCCACCTTCGTG
CTCTCTACTCCGTCCGCCGCGGACGCTGTTGGGGCCGGAGGAGGAACCCCCGAGCCGTCAGGGAAGCGCCGCGAGGCGCT
CGCGCGGCTCCGGTCCGCGGTCCTGGCCGTGGTGGCGCGCGCGCGGCGCCGGCGCGGGCGTAGGCCGATGGGGTCCAGCG
TCACCGGCACCATCTTCGGTCGGCGCCGGGGGCGCGTGCACCTGGCGCTGCAGACGGACCCGCGCACGCCGCCGGCGCTC
ATGGTGGAGCTGGCCGCGTACTCCACCGGCGCGCTCGTCAGGGAGATGTCCTCCGGCCTCGTCCGCATCGCCCTCGAGTG
CGAGAAGACGCCTACGCCTGCACACACAGGTAATACCGT----ACGTACCATACTTGCTACGTACGCCTTATATACTTGC
CTTTGCGATCGATCGACATCGTACGTG---------------TACATGCATGCAGGCGGCGAGAGGGAGAGGCGGCGGAC
GGCGCTGGTGGAGGAGCCGACGTGGCGAGCATACTGCAACGGGCGCAAGTGCGGGTACGCCGTGCGGAGGGAGTGCGGCG
CGGAGGAGTGGCGGCTGCTCCGGGCCGTCGAGCCCGTCTCCGTCGGCGCTGGCGTCGTCCCGGACGGCGGCGCCGGCGAG
GGGGACCTGATGTACATGAGAGCCAGGTTCGAGAGGGTGGTGGGATCCAGGGACTCTGAAGCGTTCTACATGATAAACCC
CGACGGCAACGGTGGGCCCGAGCTCAGCATCTACCTCCTCAGAGTCTGA-------------------------------
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>chr7B_1_TraesCS7B01G195900
TAATCCTCTGAGAGACTAATCATGATTGGAAGGATTAGCGCACTCGATCAATCTACAATTTCCTATCAATTCAGTGGGGT
ATGGCTGATACACACGCCTTGAGCTAGCTGCTCTATAATTCATTTCTGCATGATTAATCTAGCCGCATCTCATCCCAGTG
TGATGGGATCCAGAGGCACACACAAAAGAAACGGCATCCCACCATTCTGTGCCGATTCCCACAAATTTCCGGGCTCCGCT
AATTAACCGCTGAGGCTGAGGAGCGTTCTGCAAAAGCATCGATCACGTCACCATTTTTTGTCTTTCAGAAAACACTATGT
CAGTGTCCGGCAATGCTACACGTACAATCGATTTACAGGCTTTTACAGGATGGTTAATTTTGATTGGACAATAGGTGAGC
GGGGCGGCCCACCCCCCTGAAAATCAGGGAAGAGAGGTTTGTGATTGGTTGTTAGATGGAAGAAGCGTGTAAAAACGTGT
AAGTCTTTGTATGTCTAGCATTTTTGATGCTCGTCATATGCGCGTCACACGTTCCGCCTCCCAATGCCCTGTCTCCCCCG
---CCTCCTCCTCCCGCGAAAGCGACGGAC-GGGAAGCAGCTAAAATCCACGGCCGTTGCCATCATCGCTGCCCCCTTCT
TCCTTAATCGCTACCAGTTCGGTACGTGTAGGTCTGCCTGCTCTGCCCACCGCCCTCTCTCCCCAGTCTTTCGCTCCGGC
GTGTATGTGCTGCTGTGCCCCCGC-----CAAAGCGCCGAGTATCTCAGCTGGT----------------G-CCCGCTGC
ATGCCAAAAGCGCAGCCCGCACGTCTAAAGCCGACGAAATCCTTCTGCGGCTAAAGGCTAAAGCTGCCACTCTCTGCGT-
------------------------------CTGTCTGGCTCTCTCTCGAGGCGCGCTTTGTTGCTTGTTCATATACTGGC
GTTTGCCATCACG-AAACATAGTACAGATCGACTACAGGTACGCACGCACAGGCCGCGTGTTATCCTGCAGGGCTGAGGA
GTGAAGTGAGCCATCGTCATGGCGGGAACCTTACGTGCGGCAGTGGCCGCCTCGCCGCCGC---------------CGCC
GTCGCCGCTCCCGCCATCCAGGGGCGCCACCGCGAGCGGCGGCATCCCGTGGCTGCTCAGGAAGCGCGCCAGCAAGGTGC
GCCACGGCCCGCCGCTCGGCGGGCAAGAACCTGACGTCCACGATGAGGTGGAACTGGAAGACGAGGGAGCCACCTTCGTG
CTCTCTACTCCGTCCGCCGCGGACGCTGTTGGGGCCGGAGGAGGAACCCCCGAGCCGTCAGGGAAGCGCCGCGAGGCGCT
CGCGCGGCTCCGGTCCGCGGTCCTGGCCGTGGTGGCGCGCGCGCGGCGCCGGCGCGGGCGTAGGCCGATGGGGTCCAGCG
TCACCGGCACCATCTTCGGTCGGCGCCGGGGGCGCGTGCACCTGGCGCTGCAGACGGACCCGCGCACGCCGCCGGCGCTC
ATGGTGGAGCTGGCCGCGTACTCCACCGGCGCGCTCGTCAGGGAGATGTCCTCCGGCCTCGTCCGCATCGCCCTCGAGTG
CGAGAAGACGCCTACGCCTGCACACACAGGTAATACCGT----ACGTACCATACTTGCTACGTACGCCTTATATACTTGC
CTTTGCGATCGATCGACATCGTACGTG---------------TACATGCATGCAGGCGGCGAGAGGGAGAGGCGGCGGAC
GGCGCTGGTGGAGGAGCCGACGTGGCGAGCATACTGCAACGGGCGCAAGTGCGGGTACGCCGTGCGGAGGGAGTGCGGCG
CGGAGGAGTGGCGGCTGCTCCGGGCCGTCGAGCCCGTCTCCGTCGGCGCTGGCGTCGTCCCGGACGGCGGCGCCGGCGAG
GGGGACCTGATGTACATGAGAGCCAGGTTCGAGAGGGTGGTGGGATCCAGGGACTCTGAAGCGTTCTACATGATAAACCC
CGACGGCAACGGTGGGCCCGAGCTCAGCATCTACCTCCTCAGAGTCTGACAATAT---ATGTTTTTCATACCATGGGTTA
ACTCTAAAAAATGGTTATGCGTTT---TTTTTGCGGTAATAAGTTAAGCGTGTATGTTACTATGTTTGATTCTTGGTCAT
GTGAAACTGGCGGTCTGTTGATGCACTGACAATATTCTCACTCGCTTATTTTGGTTTATGCTTGCTTAGTACTCCCTCCG
TTACTAAATATAAGTCTTTCTAGAGATTTCAATATGGATTACATACAGAGCAAAATGAACGAATTTACACTCTAAACTAT
TCTATATATATCTGTATGTAGTTCATATTAAAATCACTAGAAAGACTTATATTTAGGAACAGAGGGAGTATCATTTTTAA
GTTGTTGTGCACTGGTATGGTAAGCTAAATGCAACCTTTCTAATGTTCCCCTTCTAGACTTGTGTTCAGCTTGTATGGTA
AACACCAACGCATTTGAGCAATTGCAATATATACATAGGTTAGGTTATATATAATTAACTAGTACTCATTCTGTTCCTAA
ATACTCCCTCCCTCCCAAAATTCTTGTCTTAGATTTGTCCAAATATGGATATATCAAGTCACGTTTTAATATTAGGTACA
TCCGTATCTAGACAAATTTAAGATAAAATTTTTGGAACGGAGGGAGTATAAGTTTTTTTTAGAGATTTCACTA-GGACTA
GTGGACTAAATATGAAGCATAATAAGTGAATCTACACTCTAAAGTACGTCTATATACATTCATATGTAGTCTGCATTGAA
ATCTCTAAAAAGACT---ATTTAGAAACGGATGGAGTAGTACCTCCGTACAAAAATACTTGTCGCTTAAATTGATGTATC
TAAACATATTTTAGTGTTAGGTACATCCATTTGAGCGGCAAGTGTTCTAGAATGGAGAGTATATAGTACTCCATCCGTCC
GAAAATACTTGTCGAAGAAATGCATAAAAATGGATATATTTAGAATTAAAATATGTCTAGATACATCATTTTTTCGACAA
GTATTTCCGGACGGAGAGA-----------
>chr7D_1
TAATCCTCTGAGAGACTAATCATGATTGGAAGGGTTAGCGCACTCGATCAATCTACAATTTTCTATCAATTCAGTGCGGT
ATGGCTGATACACACACCTTGAGCTAGCTGCTCTATAATTCATTTCTGCATGATTAATCTAGCCACATCTCATCCCAGTG
TGATGGGATCCAGAGGCACACACAAAAGAAACGGCATCCCACCATTCTGTGCCGATTCCCACAAATTTCCGGGTTCCGCT
AATTAACCGCCAAGGCTGAGGAGCGTTCTGCAAAGGCATCGATCACGTCACC-TTTTTTGTCTTTCAGAAAACACTATGT
CAGTGTC-------------------------------------------------------------------------
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-----------------------------------ATATGCGCGTCACACGTTCCGCCTCCCAATGCCCTGTCTCCCCCG
CCTCCTCCTCCTCCCGCGAAAGCGACGGAGGGGGAAGCAGCTAAAATCCACGGGCGTCGCCATCATCGCTGCCCCCTTCT
TCCTTAATCGCTACCAGTTCGGTACGTGTAGGTCTGCCTGCTCTGCCCACCGCCCTCTCTCCCCAGTCTTTCGCTCCGGC
GTGCATGCGCTGCCGTGCCCCCGC-----CAAAGCGCCGAGTATCCACGCAGATATCGCAGCTGGTGGCCG-CCCGCTGC
ATGCCAAAAGCGCAGCCCGCACGTCTAAAGCCGACGAAATCCTTCTGCGGCTAAAG-------CTGTCACTCTCTGCGG-
------------------------------CTGTCTG--TCTCTCTCGAGGCGCGCTTTGCTGCTTG---ATATACTGCC
GTTTGCCATCGCAAAA-CATAGTACAGATCGACTAGAGATACGCACGCACAGGCCGCGTCTGAGA---CAGGGCTGAGGA
GTGAAGTGAGCCGTCGTCATGGCGGGAACCTTACGTGCGGCAGTGGCCGCCTCGCAGCCGC---------------CGCC
GTC---------------CAGGGGCGCCACCGCCAGTGGCGGCATCCCGTGGCTGCTCAGGAAGCGCGCCGGCAAGGTGC
GCCACGGCCCGACCCTCGGCGGGCAAGAACCTGACGTCCACGATGAGGTGGAACTGGAAGACGAGGGAGCCACCTTCGTC
GTCTCTACTCCGTCCGTCGCGGACGCTGTTGGGGCGGGAGGAGGAACCCCTGAGCCGTCAGGGAAGCGCCGGGAGGCGCT
CGCGCGGCTCCGGTCCGCGGTCCTGGCCGTGGTGGCGCGCGCGCGGCGCCGGCGCGGGCGCAGGCCGATGGGGTCGAGCG
TCACCGGCACCATCTTCGGCCGGCGCCGGGGCCGCGTGCACCTGGCGCTGCAGACGGACCCGCGCGCGCCGCCGGCGCTC
ATGGTGGAGCTGTCCGCGTACTCCACCGGTGCGCTCGTCAGGGAGATGTCCTCCGGCCTCGTCCGCATCGCCCTCGAGTG
CGAGAAGACGCCTGCACACA---ACACAGGTAATACCAT----ACGTACCATGCTTGCTACGTACGCCTTGTATACATGC
CGTTGTGATCGATCGATGTCGTACGTGT---------------ACATGCATGCAGGCGGCGAGA------GGAGGCGGAC
GGCGCTGGTGGAGGAGCCGACGTGGCGAGCGTACTGCAACGGGCGCAAGTGCGGGTACGCCGTGCGGAGGGAGTGCGGCG
CGGAGGAGTGGCGGCTGCTCCGAGCCGTCGAGCCCGTCTCCGTCGGCGCTGGCGTCGTCCCGGACGGCGGCGCCGGCGAG
GGGGACCTGATGTACATGAGGGCCAGGTTCGAGAGGGTGGTGGGATCCAGGGACTCCGAAGCGTTCTACATGATAAACCC
CGACGGCAACGGTGGGCCCGAGCTCAGCATCTACCTCCTCAGAGTCTGACAATAT---ATGTTTTTCATTCCATGGGTTA
ACCCTAAAAAAGTTATGC---TTT---TTTTTTCGGTAATAAGTTAACCGTGTATGTT--------TGATTCTTGGTTAT
GTGAAACTGGCGGTCTGTTGATGCACTGACAATGTTCTCACTCGCTTATTTTGGTTTATGCTTGCTTAGTACTCCCTCAA
GTGTCAAAAACGCATTTATATTATGAGACAGAGGATAGTGTCAAAAACGCT-----------------------------
---------------------------------------------CTCATATTATGGGACAGAAGAAGTATCATCTTTAA
GTTATTGTGCACTGGTATGGTAAGCTAAATGCAACCTTTCTA-TGTTCCCCTTCTAGACTTGTGTTCAGCTTGTATAATA
AACACCAACGCATTTGAGCAATTGCAATATGGGTTAGGT--------TATATAATTAACTAGTACTCCTTTCGTTCCTAA
ATATAAG-------------------------------------------------------------------------
-----------------------------------------------------TTTTTTTAGAGATTTCACTACGGAATA
GTGAACTACATACAGAGCAAAATAAGTGAATCTATAATTTAAAATACGTCTATATATGTTTGTATGTAGTCTGCATTGAA
ATCTCTAATAAGACTTATATTTAGGAACGG-------AGTCCCTCTGTACAGAAATACTTGTGGCTTAAATTGATGTATC
TAAACATATTTCAGCACTAGATATATCTATTTGAGCGAT-----------------------------------------
------------------------------------------------------------------------------AA
GTATTTCCTGACAGAGAGAGTATATAGTAC
>chr7A_1
TAATCCTCTGAGAGACTAATCATGATTGGAAGGGTTAGCGCACTCGATCAATCTGCAATTTTCTATCAATTCAGTGCGGT
ATGGCCGATACACACACCCTGAGCTAGCTGCTCTATAATTCATTTCTGCATGATTAATCTAGCCACATCTCATCC-----
----------------------CAAAAGAAACGGCATCCCACCATTCTGTGCCGATTCCCACAAATTTCCGGGTTCCGCT
AATTAACCGCTGTGGCTGAGCAGCGTTCTGCAAAGGCAACGATCACGTCAC---TTTTTTTCTTTCTGAAAACACTGTGT
CAGTGTC-------------------------------------------------------------------------
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-----------------------------------ATATGCACGTCACACGTTCCGCCTCCCAATGCCCTGTCTCCCCCG
---GCTCCTCCTCCCGCGAAAGCGACGGAGGGGGAAGCAGCTAAAATCCACGGCCGTCGCCATCGTGGCTGCCCCCTTCT
TCCTTAATCGCTGCCAGTTCGGTACGTGTAGGTCTGCCTGCTCTGCCCACCGCCCTCTCTCCCCAGTCTTTCGCCCCGGC
GTGTATGCGCAGCCGTGCATGCCCCCGCTCAAAGCGCCGAGTATCCACGCAGATATCGCAGCTGGTGCCCGCCCCGCTGC
ATGCCAAAAGCGCAGCCCGCACGTCTAAAGCCGACGAAATCCTTCTGCGGCTAAAG-------CTGTCACTCTCTGCGGC
CTGCGGCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTC--TCTCTCTCTCGGCGCGCTTTGTTGCTTGTTCATATACTGGC
GTTTGCCGTCGCAAAAACATAGTACAGATCGACTAGAGATACGCACGCATAGGCCGCTTCTGAGC---CAGGGCTGAGGA
GTGAAGTGAGCCGTCGTCATGGCGGGAACCTTACGTGAGGCGGTGGCCGCCTCGCAGCCGCCGCCGTCGCCGCTCCCGCC
GTC---------------CAGGGGTGCCACGGCGAGCGGCGGCATCCCCTGGCTGCTCAGGAAGCGCCCCGGCAAGGTGC
GCCACGGCCCGCCGCTCGGCGGGCAAGAACCTGACGTCCACGATGAGGTGGAACTGGAAGACGAGGGAGCCACCTTCGTC
GTCTCTACTCCGTCCGTCGCGGATGCTGTTG---CCGGAGGAGGAACCCTTGAGCCATCAGGGAAGCGCCGCGAGGCGCT
CGCGCGGCTCCGGTCCGCGGTCCTGGCCGTGGTGGCGCGCGCGCGGCGCCGGCGCGGGCGCAGGCCGATGGGGTCCAGCG
TCACCGGCACCATCTTCGGCCGGCGCCGGGGCCGCGTGCACCTGGCTCTGCAGACCGACCCGCGCGCGCCGCCGGCGCTC
ATGGTGGAGCTGGCCGCGTACTCCACCGGCGCGCTCGTCAGGGAGATGTCCTCCGGCCTCGTCCGCATCGCCCTCGAGTG
CGAGAAGACGCCTGCACACA---ACACAGGTAATACCATACGTACGTACCATGCTTTCTACGTACGCCTTGTATACATGC
CGTTGCGATCGATCGACGTCGTACGTGTCTCCACGTGACGTATACATGCATGCAGGCGGCGAGA------GGCGGCGGAC
GGCGCTGGTGGAGGAGCCGACGTGGCGAGCGTACTGCAACGGGCGCAAGTGCGGGTACGCCGTGCGGAGGGAGTGCGGCG
CGGAGGAGTGGCGGCTGCTCCGAGCCGTCGAGCCCGTCTCCGTCGGCGCTGGCGTCGTCCCGGACGGCGGCGCCGGCGAG
GGGGACCTGATGTACATGAGGGCCAGGTTCGAGAGGGTGGTGGGATCCAGGGACTCTGAAGCGTTCTACATGATAAACCC
CGACGGCAACGGTGGGCCCGAGCTCAGCATCTACCTCCTCAGAGTCTGACAATATCCTATGTTTTTCATCCCATGGGTTA
ACCCTAAAAAAA-GTTATGCGTTTTTCTTTTTGCGGTAATAAGTTAAGCGTGTATGTT--------TGATTCTTGGTTAT
GTGAAACTGGCGGTCTGTTGATGCACTGACAATATTCTCACTGGCTTATTTTGGTTTATGCT------------------
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>SNPs
---------------------------------S---------------------------S--------------S---
---------------S------------------------------------------------S---------------
-------------------------------------------------------------------------S------
----------------------------------S-----------------S---------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
-----------------------------S---------------------------S----------------------
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-------S-----S-------------------------------SSS--S-S---------------------------
--------------------------------------------------------SSSSSSS---S-----------S-
-------------------------------------SS-----------------------------------------
----------S-S----------------------S--S--------------------S-S-S-SSS------------
------------S------------------------------------------S------------------------
---SSSSSSSSSSSSSSS----------------------------------------------------S---------
-------------------------------------------------------------------------------S
S---------------S---------------------------------S-----------------------------
------------------------------------------------------------S-------------------
-------------------S-----------S---------------------------------S--------------
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-------------S-S-SSSSSS--------------S--------------S-----------------S-----S---
-S---------------S----------------------------------------------SSSSSS----------
------------------------------S-------------------------------------------------
----------------------S---------------------------------------------------------
--------------------S-----------------------------------------------------------
---------------------------------------------------------------------S----------
--S--------SS---------------------------------------------SSSSSSSS-----------S--
------------------------------------------------------------------------------SS
S-SSS---S-SSSS-S-S-S-SSS--SSSSS-SSSSSS-SS--S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----SS--S-----S-S--------S-----
---S--------------------------------------S---------------------------------SS--
------------------------------SSSSSSS-SSSSSSSSS--------------------S--SS--------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S--
---S----S---SSS----S--------------S-S-S----S------------SS--SS------------------
--------S---------------S-----SSSSSSS---S----S-----S----------S-----------------
-----------S--SSS---S--S---S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
--------S---S-----------------
>forward_918
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------------------CACTCTCTGCGTCTGTCTGG------------------------------------------
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>reverse_2158
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-----------------------------------------------------------------------------CAT
GTGAAACTGGCGGTCTG---------------------------------------------------------------
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