Multiple sequence alignment - TraesCS7B01G067400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G067400 chr7B 100.000 2375 0 0 1 2375 72765687 72763313 0.000000e+00 4386.0
1 TraesCS7B01G067400 chr7B 88.542 96 10 1 2281 2375 7245620 7245525 5.360000e-22 115.0
2 TraesCS7B01G067400 chr7A 90.188 1172 56 22 593 1742 118400752 118399618 0.000000e+00 1472.0
3 TraesCS7B01G067400 chr7A 92.814 334 20 4 3 334 118401075 118400744 4.590000e-132 481.0
4 TraesCS7B01G067400 chr7A 95.802 262 11 0 331 592 512766833 512766572 7.850000e-115 424.0
5 TraesCS7B01G067400 chr7A 95.385 260 12 0 334 593 365105039 365105298 4.720000e-112 414.0
6 TraesCS7B01G067400 chr7A 83.923 311 30 7 1826 2134 118399066 118398774 1.800000e-71 279.0
7 TraesCS7B01G067400 chr7D 90.259 1119 50 21 649 1760 113348718 113347652 0.000000e+00 1408.0
8 TraesCS7B01G067400 chr7D 93.798 258 14 2 78 334 113348993 113348737 1.030000e-103 387.0
9 TraesCS7B01G067400 chr5B 96.911 259 8 0 334 592 385190384 385190126 3.630000e-118 435.0
10 TraesCS7B01G067400 chr3A 96.525 259 9 0 334 592 512035755 512035497 1.690000e-116 429.0
11 TraesCS7B01G067400 chr4B 96.047 253 10 0 334 586 22896465 22896717 1.700000e-111 412.0
12 TraesCS7B01G067400 chr4B 95.019 261 13 0 334 594 126595870 126596130 6.110000e-111 411.0
13 TraesCS7B01G067400 chr4B 93.156 263 17 1 334 595 493646255 493646517 3.700000e-103 385.0
14 TraesCS7B01G067400 chr4B 87.179 117 14 1 2260 2375 70572306 70572422 5.330000e-27 132.0
15 TraesCS7B01G067400 chr4B 87.611 113 12 2 2264 2375 28163499 28163388 1.920000e-26 130.0
16 TraesCS7B01G067400 chr2B 95.094 265 8 1 333 592 440826016 440825752 1.700000e-111 412.0
17 TraesCS7B01G067400 chr2B 86.885 122 14 2 2256 2375 790791167 790791288 4.120000e-28 135.0
18 TraesCS7B01G067400 chr2B 93.443 61 2 2 534 593 440825957 440826016 3.250000e-14 89.8
19 TraesCS7B01G067400 chr6B 95.000 260 13 0 333 592 125640136 125640395 2.200000e-110 409.0
20 TraesCS7B01G067400 chr6B 94.231 260 15 0 333 592 442429886 442430145 4.760000e-107 398.0
21 TraesCS7B01G067400 chr6B 93.694 111 7 0 2264 2374 653762595 653762485 1.460000e-37 167.0
22 TraesCS7B01G067400 chr6B 93.443 61 2 2 534 593 125640195 125640136 3.250000e-14 89.8
23 TraesCS7B01G067400 chr1D 81.439 264 42 7 8 268 457539190 457539449 2.390000e-50 209.0
24 TraesCS7B01G067400 chr4A 87.611 113 13 1 2264 2375 660438835 660438723 1.920000e-26 130.0
25 TraesCS7B01G067400 chr2A 87.611 113 13 1 2264 2375 689165164 689165052 1.920000e-26 130.0
26 TraesCS7B01G067400 chr2A 93.443 61 2 2 534 593 233457400 233457459 3.250000e-14 89.8
27 TraesCS7B01G067400 chr1B 76.515 264 47 11 20 270 627148253 627148514 1.920000e-26 130.0
28 TraesCS7B01G067400 chr1B 86.726 113 14 1 2263 2374 685245254 685245366 8.910000e-25 124.0
29 TraesCS7B01G067400 chr2D 80.292 137 23 4 1003 1137 121360507 121360641 1.500000e-17 100.0
30 TraesCS7B01G067400 chr3B 91.803 61 3 2 534 593 534189568 534189627 1.510000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G067400 chr7B 72763313 72765687 2374 True 4386.0 4386 100.0000 1 2375 1 chr7B.!!$R2 2374
1 TraesCS7B01G067400 chr7A 118398774 118401075 2301 True 744.0 1472 88.9750 3 2134 3 chr7A.!!$R2 2131
2 TraesCS7B01G067400 chr7D 113347652 113348993 1341 True 897.5 1408 92.0285 78 1760 2 chr7D.!!$R1 1682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 336 0.032678 CTAGCATCCCCACGCTACTG 59.967 60.0 0.0 0.0 39.7 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2160 2655 0.031585 TGCGTACGACAAGAAGCACT 59.968 50.0 21.65 0.0 0.0 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 4.026052 AGAAAAGTGGCCTTATGATTGGG 58.974 43.478 3.32 0.00 0.00 4.12
60 62 1.834263 CCAACCCAACCCAAGACAAAA 59.166 47.619 0.00 0.00 0.00 2.44
69 71 0.875059 CCAAGACAAAACCGAGGAGC 59.125 55.000 0.00 0.00 0.00 4.70
72 74 0.250338 AGACAAAACCGAGGAGCCAC 60.250 55.000 0.00 0.00 0.00 5.01
73 75 1.566018 GACAAAACCGAGGAGCCACG 61.566 60.000 0.00 0.00 0.00 4.94
104 106 3.247006 ACACTCCTGTCGCGATAAAAT 57.753 42.857 14.06 0.00 0.00 1.82
140 143 2.427410 GGCGCACGAAAACAGCAG 60.427 61.111 10.83 0.00 0.00 4.24
318 323 0.757188 CGTGGACCTCCCTCTAGCAT 60.757 60.000 0.00 0.00 35.38 3.79
324 329 1.124477 CCTCCCTCTAGCATCCCCAC 61.124 65.000 0.00 0.00 0.00 4.61
325 330 1.457643 TCCCTCTAGCATCCCCACG 60.458 63.158 0.00 0.00 0.00 4.94
326 331 2.423446 CCTCTAGCATCCCCACGC 59.577 66.667 0.00 0.00 0.00 5.34
327 332 2.136878 CCTCTAGCATCCCCACGCT 61.137 63.158 0.00 0.00 42.34 5.07
328 333 0.827925 CCTCTAGCATCCCCACGCTA 60.828 60.000 0.00 0.00 39.70 4.26
329 334 0.315568 CTCTAGCATCCCCACGCTAC 59.684 60.000 0.00 0.00 39.70 3.58
330 335 0.106167 TCTAGCATCCCCACGCTACT 60.106 55.000 0.00 0.00 39.70 2.57
331 336 0.032678 CTAGCATCCCCACGCTACTG 59.967 60.000 0.00 0.00 39.70 2.74
332 337 1.399744 TAGCATCCCCACGCTACTGG 61.400 60.000 0.00 0.00 39.70 4.00
337 342 2.267961 CCCACGCTACTGGGGAAC 59.732 66.667 0.76 0.00 46.76 3.62
349 354 2.493501 GGGAACCGGCTCGTCTAC 59.506 66.667 0.00 0.00 40.86 2.59
350 355 2.493501 GGAACCGGCTCGTCTACC 59.506 66.667 0.00 0.00 0.00 3.18
359 364 3.786809 CTCGTCTACCGTGCTGAAA 57.213 52.632 0.00 0.00 37.94 2.69
360 365 1.618861 CTCGTCTACCGTGCTGAAAG 58.381 55.000 0.00 0.00 37.94 2.62
371 376 4.617875 CTGAAAGCACGGTAGGGG 57.382 61.111 0.00 0.00 0.00 4.79
372 377 1.980052 CTGAAAGCACGGTAGGGGA 59.020 57.895 0.00 0.00 0.00 4.81
373 378 0.108138 CTGAAAGCACGGTAGGGGAG 60.108 60.000 0.00 0.00 0.00 4.30
374 379 1.449778 GAAAGCACGGTAGGGGAGC 60.450 63.158 0.00 0.00 0.00 4.70
375 380 1.900545 GAAAGCACGGTAGGGGAGCT 61.901 60.000 0.00 0.00 37.08 4.09
376 381 0.616679 AAAGCACGGTAGGGGAGCTA 60.617 55.000 0.00 0.00 34.66 3.32
377 382 1.328430 AAGCACGGTAGGGGAGCTAC 61.328 60.000 0.00 0.00 34.66 3.58
378 383 2.056223 GCACGGTAGGGGAGCTACA 61.056 63.158 0.00 0.00 0.00 2.74
379 384 1.814527 CACGGTAGGGGAGCTACAC 59.185 63.158 0.00 0.00 0.00 2.90
380 385 0.683504 CACGGTAGGGGAGCTACACT 60.684 60.000 5.70 5.70 0.00 3.55
381 386 0.921896 ACGGTAGGGGAGCTACACTA 59.078 55.000 2.89 2.89 0.00 2.74
382 387 1.133853 ACGGTAGGGGAGCTACACTAG 60.134 57.143 8.64 0.00 0.00 2.57
391 396 3.056628 GCTACACTAGCCTGCAGTG 57.943 57.895 13.81 7.25 45.95 3.66
392 397 1.086634 GCTACACTAGCCTGCAGTGC 61.087 60.000 13.81 15.45 45.96 4.40
393 398 0.460987 CTACACTAGCCTGCAGTGCC 60.461 60.000 19.56 5.97 45.96 5.01
394 399 0.904865 TACACTAGCCTGCAGTGCCT 60.905 55.000 19.56 12.25 45.96 4.75
395 400 1.449246 CACTAGCCTGCAGTGCCTC 60.449 63.158 19.56 1.21 37.22 4.70
396 401 1.611851 ACTAGCCTGCAGTGCCTCT 60.612 57.895 19.56 9.22 0.00 3.69
397 402 1.153409 CTAGCCTGCAGTGCCTCTG 60.153 63.158 19.56 0.00 46.12 3.35
398 403 1.897225 CTAGCCTGCAGTGCCTCTGT 61.897 60.000 19.56 7.16 45.23 3.41
399 404 2.176314 TAGCCTGCAGTGCCTCTGTG 62.176 60.000 19.56 0.64 45.23 3.66
400 405 2.745698 CCTGCAGTGCCTCTGTGA 59.254 61.111 13.72 0.00 45.23 3.58
401 406 1.298993 CCTGCAGTGCCTCTGTGAT 59.701 57.895 13.72 0.00 45.23 3.06
402 407 0.322277 CCTGCAGTGCCTCTGTGATT 60.322 55.000 13.72 0.00 45.23 2.57
403 408 1.531423 CTGCAGTGCCTCTGTGATTT 58.469 50.000 13.72 0.00 45.23 2.17
404 409 1.884579 CTGCAGTGCCTCTGTGATTTT 59.115 47.619 13.72 0.00 45.23 1.82
405 410 2.295349 CTGCAGTGCCTCTGTGATTTTT 59.705 45.455 13.72 0.00 45.23 1.94
406 411 2.294233 TGCAGTGCCTCTGTGATTTTTC 59.706 45.455 13.72 0.00 45.23 2.29
407 412 2.294233 GCAGTGCCTCTGTGATTTTTCA 59.706 45.455 2.85 0.00 45.23 2.69
408 413 3.854784 GCAGTGCCTCTGTGATTTTTCAC 60.855 47.826 2.85 0.00 45.23 3.18
409 414 3.567164 CAGTGCCTCTGTGATTTTTCACT 59.433 43.478 7.55 0.00 40.97 3.41
410 415 3.567164 AGTGCCTCTGTGATTTTTCACTG 59.433 43.478 7.55 7.08 40.97 3.66
411 416 2.294233 TGCCTCTGTGATTTTTCACTGC 59.706 45.455 7.55 5.87 40.97 4.40
412 417 2.666619 GCCTCTGTGATTTTTCACTGCG 60.667 50.000 7.55 2.65 40.97 5.18
413 418 2.578495 CTCTGTGATTTTTCACTGCGC 58.422 47.619 0.00 0.00 40.97 6.09
414 419 1.069973 TCTGTGATTTTTCACTGCGCG 60.070 47.619 0.00 0.00 40.97 6.86
415 420 0.660005 TGTGATTTTTCACTGCGCGC 60.660 50.000 27.26 27.26 40.97 6.86
416 421 0.385974 GTGATTTTTCACTGCGCGCT 60.386 50.000 33.29 10.46 37.62 5.92
417 422 1.136085 GTGATTTTTCACTGCGCGCTA 60.136 47.619 33.29 17.49 37.62 4.26
418 423 1.136085 TGATTTTTCACTGCGCGCTAC 60.136 47.619 33.29 3.49 0.00 3.58
419 424 0.871722 ATTTTTCACTGCGCGCTACA 59.128 45.000 33.29 11.56 0.00 2.74
420 425 0.871722 TTTTTCACTGCGCGCTACAT 59.128 45.000 33.29 11.99 0.00 2.29
421 426 0.165727 TTTTCACTGCGCGCTACATG 59.834 50.000 33.29 22.82 0.00 3.21
422 427 0.669012 TTTCACTGCGCGCTACATGA 60.669 50.000 33.29 24.62 0.00 3.07
423 428 0.669012 TTCACTGCGCGCTACATGAA 60.669 50.000 33.29 28.24 0.00 2.57
424 429 1.059369 CACTGCGCGCTACATGAAC 59.941 57.895 33.29 0.00 0.00 3.18
425 430 1.079819 ACTGCGCGCTACATGAACT 60.080 52.632 33.29 0.40 0.00 3.01
426 431 1.078759 ACTGCGCGCTACATGAACTC 61.079 55.000 33.29 0.00 0.00 3.01
427 432 1.078201 CTGCGCGCTACATGAACTCA 61.078 55.000 33.29 5.84 0.00 3.41
428 433 0.460109 TGCGCGCTACATGAACTCAT 60.460 50.000 33.29 0.00 36.96 2.90
440 445 3.558931 TGAACTCATGAACAGTGTGGT 57.441 42.857 0.00 0.00 0.00 4.16
441 446 3.205338 TGAACTCATGAACAGTGTGGTG 58.795 45.455 0.00 0.00 0.00 4.17
442 447 1.597742 ACTCATGAACAGTGTGGTGC 58.402 50.000 0.00 0.00 0.00 5.01
443 448 1.141657 ACTCATGAACAGTGTGGTGCT 59.858 47.619 0.00 0.00 0.00 4.40
444 449 2.368548 ACTCATGAACAGTGTGGTGCTA 59.631 45.455 0.00 0.00 0.00 3.49
445 450 2.738846 CTCATGAACAGTGTGGTGCTAC 59.261 50.000 0.00 0.00 0.00 3.58
446 451 2.103941 TCATGAACAGTGTGGTGCTACA 59.896 45.455 0.00 0.00 0.00 2.74
447 452 2.238942 TGAACAGTGTGGTGCTACAG 57.761 50.000 0.00 0.00 0.00 2.74
448 453 1.202639 TGAACAGTGTGGTGCTACAGG 60.203 52.381 0.00 0.00 0.00 4.00
449 454 0.108585 AACAGTGTGGTGCTACAGGG 59.891 55.000 0.00 0.00 0.00 4.45
450 455 1.054406 ACAGTGTGGTGCTACAGGGT 61.054 55.000 0.00 0.00 0.00 4.34
451 456 0.603707 CAGTGTGGTGCTACAGGGTG 60.604 60.000 0.00 0.00 0.00 4.61
452 457 1.966451 GTGTGGTGCTACAGGGTGC 60.966 63.158 0.00 0.00 0.00 5.01
453 458 2.359975 GTGGTGCTACAGGGTGCC 60.360 66.667 0.00 0.00 0.00 5.01
454 459 3.646715 TGGTGCTACAGGGTGCCC 61.647 66.667 0.00 0.00 0.00 5.36
455 460 4.778143 GGTGCTACAGGGTGCCCG 62.778 72.222 0.98 0.00 41.95 6.13
458 463 3.467226 GCTACAGGGTGCCCGCTA 61.467 66.667 0.98 0.00 41.95 4.26
459 464 2.499685 CTACAGGGTGCCCGCTAC 59.500 66.667 0.98 0.00 41.95 3.58
460 465 2.284039 TACAGGGTGCCCGCTACA 60.284 61.111 0.98 0.00 41.95 2.74
461 466 2.298158 CTACAGGGTGCCCGCTACAG 62.298 65.000 0.98 0.00 41.95 2.74
462 467 3.706373 CAGGGTGCCCGCTACAGT 61.706 66.667 0.98 0.00 41.95 3.55
463 468 2.038329 AGGGTGCCCGCTACAGTA 59.962 61.111 0.98 0.00 41.95 2.74
464 469 2.186125 GGGTGCCCGCTACAGTAC 59.814 66.667 0.00 0.00 0.00 2.73
465 470 2.652095 GGGTGCCCGCTACAGTACA 61.652 63.158 0.00 0.00 0.00 2.90
466 471 1.520666 GGTGCCCGCTACAGTACAT 59.479 57.895 0.00 0.00 0.00 2.29
467 472 0.748450 GGTGCCCGCTACAGTACATA 59.252 55.000 0.00 0.00 0.00 2.29
468 473 1.343465 GGTGCCCGCTACAGTACATAT 59.657 52.381 0.00 0.00 0.00 1.78
469 474 2.224209 GGTGCCCGCTACAGTACATATT 60.224 50.000 0.00 0.00 0.00 1.28
470 475 3.463944 GTGCCCGCTACAGTACATATTT 58.536 45.455 0.00 0.00 0.00 1.40
471 476 4.501915 GGTGCCCGCTACAGTACATATTTA 60.502 45.833 0.00 0.00 0.00 1.40
472 477 5.235516 GTGCCCGCTACAGTACATATTTAT 58.764 41.667 0.00 0.00 0.00 1.40
473 478 5.699458 GTGCCCGCTACAGTACATATTTATT 59.301 40.000 0.00 0.00 0.00 1.40
474 479 6.869913 GTGCCCGCTACAGTACATATTTATTA 59.130 38.462 0.00 0.00 0.00 0.98
475 480 6.869913 TGCCCGCTACAGTACATATTTATTAC 59.130 38.462 0.00 0.00 0.00 1.89
476 481 6.869913 GCCCGCTACAGTACATATTTATTACA 59.130 38.462 0.00 0.00 0.00 2.41
477 482 7.063074 GCCCGCTACAGTACATATTTATTACAG 59.937 40.741 0.00 0.00 0.00 2.74
478 483 8.086522 CCCGCTACAGTACATATTTATTACAGT 58.913 37.037 0.00 0.00 0.00 3.55
500 505 3.711086 AGATTCGCTACAGTGCATAGTG 58.289 45.455 4.45 2.59 0.00 2.74
501 506 1.640428 TTCGCTACAGTGCATAGTGC 58.360 50.000 4.45 0.00 45.29 4.40
502 507 0.817654 TCGCTACAGTGCATAGTGCT 59.182 50.000 3.41 0.00 45.31 4.40
503 508 2.021457 TCGCTACAGTGCATAGTGCTA 58.979 47.619 3.41 0.00 45.31 3.49
504 509 2.623416 TCGCTACAGTGCATAGTGCTAT 59.377 45.455 3.41 0.00 45.31 2.97
505 510 3.818773 TCGCTACAGTGCATAGTGCTATA 59.181 43.478 3.41 0.00 45.31 1.31
506 511 4.083271 TCGCTACAGTGCATAGTGCTATAG 60.083 45.833 3.41 0.00 45.31 1.31
507 512 4.489810 GCTACAGTGCATAGTGCTATAGG 58.510 47.826 1.04 0.00 45.31 2.57
508 513 4.619394 GCTACAGTGCATAGTGCTATAGGG 60.619 50.000 1.04 0.00 45.31 3.53
509 514 2.037772 ACAGTGCATAGTGCTATAGGGC 59.962 50.000 1.04 0.00 45.31 5.19
510 515 1.625818 AGTGCATAGTGCTATAGGGCC 59.374 52.381 0.00 0.00 45.31 5.80
511 516 0.984230 TGCATAGTGCTATAGGGCCC 59.016 55.000 16.46 16.46 45.31 5.80
512 517 1.280457 GCATAGTGCTATAGGGCCCT 58.720 55.000 31.35 31.35 40.96 5.19
513 518 1.065854 GCATAGTGCTATAGGGCCCTG 60.066 57.143 35.81 19.39 40.96 4.45
514 519 1.065854 CATAGTGCTATAGGGCCCTGC 60.066 57.143 35.81 28.63 0.00 4.85
515 520 0.105194 TAGTGCTATAGGGCCCTGCA 60.105 55.000 35.81 30.97 0.00 4.41
516 521 1.072159 GTGCTATAGGGCCCTGCAG 59.928 63.158 35.81 28.80 34.15 4.41
517 522 1.384502 TGCTATAGGGCCCTGCAGT 60.385 57.895 35.81 19.10 0.00 4.40
518 523 1.072159 GCTATAGGGCCCTGCAGTG 59.928 63.158 35.81 19.38 0.00 3.66
519 524 1.072159 CTATAGGGCCCTGCAGTGC 59.928 63.158 35.81 13.30 0.00 4.40
524 529 4.357279 GGCCCTGCAGTGCCTTCT 62.357 66.667 30.38 0.00 44.46 2.85
525 530 3.060615 GCCCTGCAGTGCCTTCTG 61.061 66.667 10.40 0.00 38.35 3.02
532 537 2.093216 CAGTGCCTTCTGCGATTCC 58.907 57.895 0.00 0.00 45.60 3.01
533 538 1.078143 AGTGCCTTCTGCGATTCCC 60.078 57.895 0.00 0.00 45.60 3.97
534 539 1.377202 GTGCCTTCTGCGATTCCCA 60.377 57.895 0.00 0.00 45.60 4.37
535 540 1.377202 TGCCTTCTGCGATTCCCAC 60.377 57.895 0.00 0.00 45.60 4.61
536 541 1.078143 GCCTTCTGCGATTCCCACT 60.078 57.895 0.00 0.00 0.00 4.00
537 542 1.372087 GCCTTCTGCGATTCCCACTG 61.372 60.000 0.00 0.00 0.00 3.66
538 543 1.372087 CCTTCTGCGATTCCCACTGC 61.372 60.000 0.00 0.00 0.00 4.40
539 544 1.699656 CTTCTGCGATTCCCACTGCG 61.700 60.000 0.00 0.00 0.00 5.18
540 545 2.434884 CTGCGATTCCCACTGCGT 60.435 61.111 0.00 0.00 0.00 5.24
541 546 2.741985 TGCGATTCCCACTGCGTG 60.742 61.111 0.00 2.27 0.00 5.34
551 556 3.036026 CACTGCGTGGCTACTGTAG 57.964 57.895 10.48 10.48 0.00 2.74
561 566 1.736586 CTACTGTAGCTCCCTGCCG 59.263 63.158 1.26 0.00 44.23 5.69
562 567 1.000019 TACTGTAGCTCCCTGCCGT 60.000 57.895 0.00 0.00 44.23 5.68
563 568 1.320344 TACTGTAGCTCCCTGCCGTG 61.320 60.000 0.00 0.00 44.23 4.94
564 569 4.082523 TGTAGCTCCCTGCCGTGC 62.083 66.667 0.00 0.00 44.23 5.34
565 570 4.840005 GTAGCTCCCTGCCGTGCC 62.840 72.222 0.00 0.00 44.23 5.01
569 574 4.020617 CTCCCTGCCGTGCCTTCA 62.021 66.667 0.00 0.00 0.00 3.02
570 575 3.965539 CTCCCTGCCGTGCCTTCAG 62.966 68.421 0.00 0.00 0.00 3.02
580 585 4.187056 GCCTTCAGCACGGTAGAC 57.813 61.111 0.00 0.00 42.97 2.59
591 596 2.493501 GGTAGACGAGCCGGTTCC 59.506 66.667 13.19 0.00 0.00 3.62
598 603 3.459063 GAGCCGGTTCCCGCTACT 61.459 66.667 7.13 0.00 46.86 2.57
620 625 3.650298 TACGGCCCGTACAGGAGCT 62.650 63.158 12.92 0.00 45.00 4.09
633 638 2.369001 GAGCTACCACCTCCCCCT 59.631 66.667 0.00 0.00 0.00 4.79
635 640 3.798511 GCTACCACCTCCCCCTGC 61.799 72.222 0.00 0.00 0.00 4.85
637 642 4.752594 TACCACCTCCCCCTGCCC 62.753 72.222 0.00 0.00 0.00 5.36
800 805 3.760035 GGAAGCGCGAGGGAGACA 61.760 66.667 12.10 0.00 0.00 3.41
881 886 4.527583 GAGCGAGCAGGCCAGGAG 62.528 72.222 5.01 0.00 0.00 3.69
884 889 4.834453 CGAGCAGGCCAGGAGCAG 62.834 72.222 5.01 0.00 46.50 4.24
885 890 4.486503 GAGCAGGCCAGGAGCAGG 62.487 72.222 5.01 0.00 46.50 4.85
887 892 4.486503 GCAGGCCAGGAGCAGGAG 62.487 72.222 5.01 0.00 46.50 3.69
888 893 3.795041 CAGGCCAGGAGCAGGAGG 61.795 72.222 5.01 0.00 46.50 4.30
889 894 4.016790 AGGCCAGGAGCAGGAGGA 62.017 66.667 5.01 0.00 46.50 3.71
963 968 2.698797 CTGGGAGAAGGAGCGGTAATTA 59.301 50.000 0.00 0.00 0.00 1.40
964 969 3.109151 TGGGAGAAGGAGCGGTAATTAA 58.891 45.455 0.00 0.00 0.00 1.40
965 970 3.134081 TGGGAGAAGGAGCGGTAATTAAG 59.866 47.826 0.00 0.00 0.00 1.85
967 972 4.383880 GGGAGAAGGAGCGGTAATTAAGTT 60.384 45.833 0.00 0.00 0.00 2.66
968 973 4.809958 GGAGAAGGAGCGGTAATTAAGTTC 59.190 45.833 0.00 0.00 0.00 3.01
974 979 4.444720 GGAGCGGTAATTAAGTTCATCGAG 59.555 45.833 0.00 0.00 0.00 4.04
975 980 5.258456 AGCGGTAATTAAGTTCATCGAGA 57.742 39.130 0.00 0.00 0.00 4.04
1014 1019 3.412624 GAGCATGGAGGTGGAGGCC 62.413 68.421 0.00 0.00 0.00 5.19
1368 1373 4.994201 TGCACGGACGCTGACGAC 62.994 66.667 0.00 0.00 43.93 4.34
1384 1389 3.200887 GACGCCTGATCGATCGCCT 62.201 63.158 20.03 8.45 0.00 5.52
1385 1390 1.853114 GACGCCTGATCGATCGCCTA 61.853 60.000 20.03 1.99 0.00 3.93
1424 1435 0.034337 TAGCTCGTGGTGGGTTGTTC 59.966 55.000 0.00 0.00 0.00 3.18
1449 1465 1.522668 TGATTGGGCAAAGACGTCAG 58.477 50.000 19.50 8.31 0.00 3.51
1504 1524 2.435586 CTTGCCTGCCGTCCTGAG 60.436 66.667 0.00 0.00 0.00 3.35
1529 1549 6.238759 GGAATGAATAATTTGCGTCCTAGCTT 60.239 38.462 0.00 0.00 38.13 3.74
1594 1614 7.043656 TCGAGCATGAAGTTATTACGTAATGTG 60.044 37.037 27.15 15.30 0.00 3.21
1597 1617 7.065803 AGCATGAAGTTATTACGTAATGTGCTT 59.934 33.333 27.15 24.20 0.00 3.91
1712 1739 4.911390 AGTTATGCAGGCTTCTTGTAAGT 58.089 39.130 0.00 0.00 0.00 2.24
1714 1741 6.472887 AGTTATGCAGGCTTCTTGTAAGTTA 58.527 36.000 0.00 0.00 0.00 2.24
1715 1742 6.371825 AGTTATGCAGGCTTCTTGTAAGTTAC 59.628 38.462 6.06 6.06 0.00 2.50
1721 1748 6.402222 CAGGCTTCTTGTAAGTTACTCAGAT 58.598 40.000 14.00 0.00 0.00 2.90
1727 1754 6.936279 TCTTGTAAGTTACTCAGATGGAAGG 58.064 40.000 14.00 0.00 0.00 3.46
1728 1755 6.724441 TCTTGTAAGTTACTCAGATGGAAGGA 59.276 38.462 14.00 0.00 0.00 3.36
1742 1769 6.536582 CAGATGGAAGGACATGTAAAGTAGTG 59.463 42.308 0.00 0.00 0.00 2.74
1743 1770 4.575885 TGGAAGGACATGTAAAGTAGTGC 58.424 43.478 0.00 0.00 0.00 4.40
1750 1777 5.643777 GGACATGTAAAGTAGTGCTCATTGT 59.356 40.000 0.00 0.00 0.00 2.71
1752 1779 7.010552 GGACATGTAAAGTAGTGCTCATTGTAG 59.989 40.741 0.00 0.00 0.00 2.74
1760 1787 9.804758 AAAGTAGTGCTCATTGTAGTAATCTAC 57.195 33.333 0.00 0.00 44.72 2.59
1815 1940 3.760738 TGTTTGTATTGCCATGTCCTCA 58.239 40.909 0.00 0.00 0.00 3.86
1828 1953 1.352017 TGTCCTCACATGGATGCAAGT 59.648 47.619 0.00 0.00 38.52 3.16
1844 2339 7.093377 TGGATGCAAGTAATTAGGCTTGATTTT 60.093 33.333 16.18 2.03 43.29 1.82
1851 2346 8.635765 AGTAATTAGGCTTGATTTTCAACAGA 57.364 30.769 0.00 0.00 32.21 3.41
1852 2347 8.734386 AGTAATTAGGCTTGATTTTCAACAGAG 58.266 33.333 0.00 0.00 32.21 3.35
1853 2348 7.530426 AATTAGGCTTGATTTTCAACAGAGT 57.470 32.000 0.00 0.00 32.21 3.24
1854 2349 6.560253 TTAGGCTTGATTTTCAACAGAGTC 57.440 37.500 0.00 0.00 32.21 3.36
1856 2351 4.518211 AGGCTTGATTTTCAACAGAGTCAG 59.482 41.667 0.00 0.00 32.21 3.51
1859 2354 6.460123 GGCTTGATTTTCAACAGAGTCAGAAA 60.460 38.462 0.00 0.00 32.21 2.52
1866 2361 8.856490 TTTTCAACAGAGTCAGAAAATAAAGC 57.144 30.769 0.00 0.00 35.68 3.51
1867 2362 6.228273 TCAACAGAGTCAGAAAATAAAGCG 57.772 37.500 0.00 0.00 0.00 4.68
1868 2363 5.179368 TCAACAGAGTCAGAAAATAAAGCGG 59.821 40.000 0.00 0.00 0.00 5.52
1869 2364 4.642429 ACAGAGTCAGAAAATAAAGCGGT 58.358 39.130 0.00 0.00 0.00 5.68
1870 2365 5.063880 ACAGAGTCAGAAAATAAAGCGGTT 58.936 37.500 0.00 0.00 0.00 4.44
1886 2381 4.777463 AGCGGTTTTGCTATATAACAGGT 58.223 39.130 0.00 0.00 45.14 4.00
1888 2383 4.788521 GCGGTTTTGCTATATAACAGGTGC 60.789 45.833 0.00 0.00 0.00 5.01
1889 2384 4.261031 CGGTTTTGCTATATAACAGGTGCC 60.261 45.833 0.00 0.00 0.00 5.01
1893 2388 5.567037 TTGCTATATAACAGGTGCCTGAT 57.433 39.130 23.55 14.88 46.30 2.90
1894 2389 5.567037 TGCTATATAACAGGTGCCTGATT 57.433 39.130 23.55 15.47 46.30 2.57
1896 2391 7.257790 TGCTATATAACAGGTGCCTGATTAT 57.742 36.000 23.55 21.07 46.30 1.28
1897 2392 7.689299 TGCTATATAACAGGTGCCTGATTATT 58.311 34.615 23.55 10.45 46.30 1.40
1899 2394 9.838339 GCTATATAACAGGTGCCTGATTATTAT 57.162 33.333 23.55 17.28 46.30 1.28
1913 2408 8.293157 GCCTGATTATTATTTTTAGCTCTCACC 58.707 37.037 0.00 0.00 0.00 4.02
1914 2409 8.787852 CCTGATTATTATTTTTAGCTCTCACCC 58.212 37.037 0.00 0.00 0.00 4.61
1919 2414 7.881775 ATTATTTTTAGCTCTCACCCGAATT 57.118 32.000 0.00 0.00 0.00 2.17
1943 2438 5.008980 TGCAACCATCATTCACATAGTTCA 58.991 37.500 0.00 0.00 0.00 3.18
1959 2454 3.873910 AGTTCATGATTCGTACTTGGGG 58.126 45.455 0.00 0.00 0.00 4.96
1970 2465 1.144298 GTACTTGGGGTCTGTTTGGGT 59.856 52.381 0.00 0.00 0.00 4.51
1971 2466 0.634465 ACTTGGGGTCTGTTTGGGTT 59.366 50.000 0.00 0.00 0.00 4.11
1972 2467 1.854280 ACTTGGGGTCTGTTTGGGTTA 59.146 47.619 0.00 0.00 0.00 2.85
1973 2468 2.449345 ACTTGGGGTCTGTTTGGGTTAT 59.551 45.455 0.00 0.00 0.00 1.89
1974 2469 3.658705 ACTTGGGGTCTGTTTGGGTTATA 59.341 43.478 0.00 0.00 0.00 0.98
1975 2470 4.263771 ACTTGGGGTCTGTTTGGGTTATAG 60.264 45.833 0.00 0.00 0.00 1.31
1976 2471 3.261962 TGGGGTCTGTTTGGGTTATAGT 58.738 45.455 0.00 0.00 0.00 2.12
1977 2472 3.658705 TGGGGTCTGTTTGGGTTATAGTT 59.341 43.478 0.00 0.00 0.00 2.24
1978 2473 4.014406 GGGGTCTGTTTGGGTTATAGTTG 58.986 47.826 0.00 0.00 0.00 3.16
1979 2474 4.263594 GGGGTCTGTTTGGGTTATAGTTGA 60.264 45.833 0.00 0.00 0.00 3.18
1980 2475 4.698780 GGGTCTGTTTGGGTTATAGTTGAC 59.301 45.833 0.00 0.00 0.00 3.18
1981 2476 5.514310 GGGTCTGTTTGGGTTATAGTTGACT 60.514 44.000 0.00 0.00 0.00 3.41
1982 2477 5.411669 GGTCTGTTTGGGTTATAGTTGACTG 59.588 44.000 0.00 0.00 0.00 3.51
1983 2478 5.411669 GTCTGTTTGGGTTATAGTTGACTGG 59.588 44.000 0.00 0.00 0.00 4.00
1984 2479 4.658063 TGTTTGGGTTATAGTTGACTGGG 58.342 43.478 0.00 0.00 0.00 4.45
1985 2480 4.105057 TGTTTGGGTTATAGTTGACTGGGT 59.895 41.667 0.00 0.00 0.00 4.51
1986 2481 5.074804 GTTTGGGTTATAGTTGACTGGGTT 58.925 41.667 0.00 0.00 0.00 4.11
1987 2482 6.183361 TGTTTGGGTTATAGTTGACTGGGTTA 60.183 38.462 0.00 0.00 0.00 2.85
1999 2494 6.213600 AGTTGACTGGGTTATAGTTGACTGAT 59.786 38.462 0.00 0.00 0.00 2.90
2029 2524 7.596995 ACTTTTGTTTTCAGTCGATTTTGTTCA 59.403 29.630 0.00 0.00 0.00 3.18
2032 2527 3.519908 TTCAGTCGATTTTGTTCAGCG 57.480 42.857 0.00 0.00 0.00 5.18
2033 2528 1.798223 TCAGTCGATTTTGTTCAGCGG 59.202 47.619 0.00 0.00 0.00 5.52
2039 2534 2.031157 CGATTTTGTTCAGCGGAAAGGT 60.031 45.455 0.00 0.00 34.13 3.50
2045 2540 1.947456 GTTCAGCGGAAAGGTTTCAGT 59.053 47.619 0.00 0.00 38.92 3.41
2077 2572 0.874607 GGCTAGTGGGTTATGCGTCG 60.875 60.000 0.00 0.00 0.00 5.12
2092 2587 1.432270 CGTCGGTCCGGTAGTAGTCC 61.432 65.000 12.29 0.00 0.00 3.85
2104 2599 5.470777 CCGGTAGTAGTCCATTTGTTTTTCA 59.529 40.000 0.00 0.00 0.00 2.69
2134 2629 2.571212 TGTTGTTGCTTGGGTCACTAG 58.429 47.619 0.00 0.00 0.00 2.57
2135 2630 1.880027 GTTGTTGCTTGGGTCACTAGG 59.120 52.381 0.00 0.00 0.00 3.02
2136 2631 0.400213 TGTTGCTTGGGTCACTAGGG 59.600 55.000 0.00 0.00 0.00 3.53
2137 2632 0.400594 GTTGCTTGGGTCACTAGGGT 59.599 55.000 0.00 0.00 0.00 4.34
2138 2633 1.145571 TTGCTTGGGTCACTAGGGTT 58.854 50.000 0.00 0.00 0.00 4.11
2139 2634 0.690762 TGCTTGGGTCACTAGGGTTC 59.309 55.000 0.00 0.00 0.00 3.62
2140 2635 0.984995 GCTTGGGTCACTAGGGTTCT 59.015 55.000 0.00 0.00 0.00 3.01
2141 2636 1.339151 GCTTGGGTCACTAGGGTTCTG 60.339 57.143 0.00 0.00 0.00 3.02
2142 2637 1.978580 CTTGGGTCACTAGGGTTCTGT 59.021 52.381 0.00 0.00 0.00 3.41
2143 2638 1.348064 TGGGTCACTAGGGTTCTGTG 58.652 55.000 0.00 0.00 0.00 3.66
2144 2639 1.349067 GGGTCACTAGGGTTCTGTGT 58.651 55.000 0.00 0.00 33.82 3.72
2145 2640 1.697982 GGGTCACTAGGGTTCTGTGTT 59.302 52.381 0.00 0.00 33.82 3.32
2146 2641 2.289506 GGGTCACTAGGGTTCTGTGTTC 60.290 54.545 0.00 0.00 33.82 3.18
2147 2642 2.609737 GGTCACTAGGGTTCTGTGTTCG 60.610 54.545 0.00 0.00 33.82 3.95
2148 2643 1.000506 TCACTAGGGTTCTGTGTTCGC 59.999 52.381 0.00 0.00 33.82 4.70
2149 2644 1.045407 ACTAGGGTTCTGTGTTCGCA 58.955 50.000 0.00 0.00 0.00 5.10
2150 2645 1.414919 ACTAGGGTTCTGTGTTCGCAA 59.585 47.619 0.00 0.00 0.00 4.85
2151 2646 2.069273 CTAGGGTTCTGTGTTCGCAAG 58.931 52.381 0.00 0.00 0.00 4.01
2164 2659 0.790207 TCGCAAGATTGTCGAAGTGC 59.210 50.000 8.81 0.00 45.01 4.40
2165 2660 0.792640 CGCAAGATTGTCGAAGTGCT 59.207 50.000 0.00 0.00 43.02 4.40
2166 2661 1.195448 CGCAAGATTGTCGAAGTGCTT 59.805 47.619 0.00 0.00 43.02 3.91
2167 2662 2.723010 CGCAAGATTGTCGAAGTGCTTC 60.723 50.000 2.04 2.04 43.02 3.86
2168 2663 2.481952 GCAAGATTGTCGAAGTGCTTCT 59.518 45.455 9.84 0.00 37.44 2.85
2169 2664 3.058639 GCAAGATTGTCGAAGTGCTTCTT 60.059 43.478 9.84 0.00 37.44 2.52
2170 2665 4.461405 CAAGATTGTCGAAGTGCTTCTTG 58.539 43.478 9.84 0.00 37.44 3.02
2171 2666 3.733337 AGATTGTCGAAGTGCTTCTTGT 58.267 40.909 9.84 0.00 37.44 3.16
2172 2667 3.743396 AGATTGTCGAAGTGCTTCTTGTC 59.257 43.478 9.84 2.44 37.44 3.18
2173 2668 1.487482 TGTCGAAGTGCTTCTTGTCG 58.513 50.000 9.84 0.00 37.44 4.35
2174 2669 1.202371 TGTCGAAGTGCTTCTTGTCGT 60.202 47.619 9.84 0.00 37.44 4.34
2175 2670 2.033675 TGTCGAAGTGCTTCTTGTCGTA 59.966 45.455 9.84 0.00 37.44 3.43
2176 2671 2.404361 GTCGAAGTGCTTCTTGTCGTAC 59.596 50.000 9.84 0.00 37.44 3.67
2177 2672 1.382419 CGAAGTGCTTCTTGTCGTACG 59.618 52.381 9.53 9.53 37.44 3.67
2178 2673 1.124477 GAAGTGCTTCTTGTCGTACGC 59.876 52.381 11.24 6.57 36.40 4.42
2179 2674 0.031585 AGTGCTTCTTGTCGTACGCA 59.968 50.000 11.24 9.37 0.00 5.24
2180 2675 0.161024 GTGCTTCTTGTCGTACGCAC 59.839 55.000 11.24 10.40 40.53 5.34
2195 2690 5.697848 GTACGCACGAAATAAATGAGACT 57.302 39.130 0.00 0.00 0.00 3.24
2196 2691 4.842139 ACGCACGAAATAAATGAGACTC 57.158 40.909 0.00 0.00 0.00 3.36
2197 2692 4.242475 ACGCACGAAATAAATGAGACTCA 58.758 39.130 7.80 7.80 0.00 3.41
2198 2693 4.688879 ACGCACGAAATAAATGAGACTCAA 59.311 37.500 9.70 0.00 0.00 3.02
2199 2694 5.351465 ACGCACGAAATAAATGAGACTCAAT 59.649 36.000 9.70 0.00 0.00 2.57
2200 2695 6.128282 ACGCACGAAATAAATGAGACTCAATT 60.128 34.615 9.70 10.17 0.00 2.32
2201 2696 6.409185 CGCACGAAATAAATGAGACTCAATTC 59.591 38.462 9.70 8.33 0.00 2.17
2202 2697 7.243487 GCACGAAATAAATGAGACTCAATTCA 58.757 34.615 9.70 0.00 0.00 2.57
2203 2698 7.912250 GCACGAAATAAATGAGACTCAATTCAT 59.088 33.333 9.70 0.00 35.63 2.57
2204 2699 9.778993 CACGAAATAAATGAGACTCAATTCATT 57.221 29.630 9.70 6.24 43.79 2.57
2210 2705 9.994432 ATAAATGAGACTCAATTCATTTTCGTC 57.006 29.630 9.70 0.00 46.41 4.20
2211 2706 7.439157 AATGAGACTCAATTCATTTTCGTCA 57.561 32.000 9.70 0.00 40.19 4.35
2212 2707 7.621428 ATGAGACTCAATTCATTTTCGTCAT 57.379 32.000 9.70 0.00 30.06 3.06
2213 2708 6.834876 TGAGACTCAATTCATTTTCGTCATG 58.165 36.000 1.64 0.00 0.00 3.07
2214 2709 6.427853 TGAGACTCAATTCATTTTCGTCATGT 59.572 34.615 1.64 0.00 0.00 3.21
2215 2710 7.041167 TGAGACTCAATTCATTTTCGTCATGTT 60.041 33.333 1.64 0.00 0.00 2.71
2216 2711 7.651808 AGACTCAATTCATTTTCGTCATGTTT 58.348 30.769 0.00 0.00 0.00 2.83
2217 2712 7.592533 AGACTCAATTCATTTTCGTCATGTTTG 59.407 33.333 0.00 0.00 0.00 2.93
2218 2713 7.202526 ACTCAATTCATTTTCGTCATGTTTGT 58.797 30.769 0.00 0.00 0.00 2.83
2219 2714 7.167968 ACTCAATTCATTTTCGTCATGTTTGTG 59.832 33.333 0.00 0.00 0.00 3.33
2220 2715 6.977502 TCAATTCATTTTCGTCATGTTTGTGT 59.022 30.769 0.00 0.00 0.00 3.72
2221 2716 8.131731 TCAATTCATTTTCGTCATGTTTGTGTA 58.868 29.630 0.00 0.00 0.00 2.90
2222 2717 8.914654 CAATTCATTTTCGTCATGTTTGTGTAT 58.085 29.630 0.00 0.00 0.00 2.29
2223 2718 7.850268 TTCATTTTCGTCATGTTTGTGTATG 57.150 32.000 0.00 0.00 0.00 2.39
2224 2719 5.855925 TCATTTTCGTCATGTTTGTGTATGC 59.144 36.000 0.00 0.00 0.00 3.14
2225 2720 4.820284 TTTCGTCATGTTTGTGTATGCA 57.180 36.364 0.00 0.00 0.00 3.96
2226 2721 3.804518 TCGTCATGTTTGTGTATGCAC 57.195 42.857 7.03 7.03 45.44 4.57
2227 2722 3.398406 TCGTCATGTTTGTGTATGCACT 58.602 40.909 15.25 0.00 45.44 4.40
2228 2723 3.812609 TCGTCATGTTTGTGTATGCACTT 59.187 39.130 15.25 0.00 45.44 3.16
2229 2724 4.084066 TCGTCATGTTTGTGTATGCACTTC 60.084 41.667 15.25 6.15 45.44 3.01
2230 2725 4.151070 GTCATGTTTGTGTATGCACTTCG 58.849 43.478 15.25 0.00 45.44 3.79
2231 2726 3.188254 TCATGTTTGTGTATGCACTTCGG 59.812 43.478 15.25 0.85 45.44 4.30
2232 2727 2.839975 TGTTTGTGTATGCACTTCGGA 58.160 42.857 15.25 0.00 45.44 4.55
2233 2728 2.805671 TGTTTGTGTATGCACTTCGGAG 59.194 45.455 15.25 0.00 45.44 4.63
2234 2729 2.093306 TTGTGTATGCACTTCGGAGG 57.907 50.000 15.25 0.00 45.44 4.30
2235 2730 0.391130 TGTGTATGCACTTCGGAGGC 60.391 55.000 15.25 0.00 45.44 4.70
2236 2731 1.153647 TGTATGCACTTCGGAGGCG 60.154 57.895 0.00 0.00 0.00 5.52
2237 2732 1.141019 GTATGCACTTCGGAGGCGA 59.859 57.895 0.00 0.00 0.00 5.54
2238 2733 0.249489 GTATGCACTTCGGAGGCGAT 60.249 55.000 0.00 0.00 0.00 4.58
2239 2734 1.000607 GTATGCACTTCGGAGGCGATA 60.001 52.381 0.00 0.00 0.00 2.92
2240 2735 0.464036 ATGCACTTCGGAGGCGATAA 59.536 50.000 0.00 0.00 0.00 1.75
2241 2736 0.459585 TGCACTTCGGAGGCGATAAC 60.460 55.000 0.00 0.00 0.00 1.89
2242 2737 0.459585 GCACTTCGGAGGCGATAACA 60.460 55.000 0.00 0.00 0.00 2.41
2243 2738 1.806623 GCACTTCGGAGGCGATAACAT 60.807 52.381 0.00 0.00 0.00 2.71
2244 2739 2.550978 CACTTCGGAGGCGATAACATT 58.449 47.619 0.00 0.00 0.00 2.71
2245 2740 2.285220 CACTTCGGAGGCGATAACATTG 59.715 50.000 0.00 0.00 0.00 2.82
2246 2741 1.867233 CTTCGGAGGCGATAACATTGG 59.133 52.381 0.00 0.00 0.00 3.16
2247 2742 0.531974 TCGGAGGCGATAACATTGGC 60.532 55.000 0.00 0.00 39.40 4.52
2248 2743 0.813610 CGGAGGCGATAACATTGGCA 60.814 55.000 3.13 0.00 41.44 4.92
2249 2744 1.609208 GGAGGCGATAACATTGGCAT 58.391 50.000 0.00 0.00 41.44 4.40
2250 2745 1.267806 GGAGGCGATAACATTGGCATG 59.732 52.381 0.00 0.00 41.44 4.06
2251 2746 2.221169 GAGGCGATAACATTGGCATGA 58.779 47.619 0.00 0.00 41.44 3.07
2252 2747 2.224606 AGGCGATAACATTGGCATGAG 58.775 47.619 0.00 0.00 41.44 2.90
2253 2748 1.949525 GGCGATAACATTGGCATGAGT 59.050 47.619 0.00 0.00 38.97 3.41
2254 2749 3.138304 GGCGATAACATTGGCATGAGTA 58.862 45.455 0.00 0.00 38.97 2.59
2255 2750 3.563808 GGCGATAACATTGGCATGAGTAA 59.436 43.478 0.00 0.00 38.97 2.24
2256 2751 4.319766 GGCGATAACATTGGCATGAGTAAG 60.320 45.833 0.00 0.00 38.97 2.34
2257 2752 4.511454 GCGATAACATTGGCATGAGTAAGA 59.489 41.667 0.00 0.00 34.11 2.10
2258 2753 5.559035 GCGATAACATTGGCATGAGTAAGAC 60.559 44.000 0.00 0.00 34.11 3.01
2259 2754 5.523552 CGATAACATTGGCATGAGTAAGACA 59.476 40.000 0.00 0.00 34.11 3.41
2260 2755 6.510157 CGATAACATTGGCATGAGTAAGACAC 60.510 42.308 0.00 0.00 34.11 3.67
2261 2756 4.292186 ACATTGGCATGAGTAAGACACT 57.708 40.909 0.00 0.00 41.47 3.55
2262 2757 4.655963 ACATTGGCATGAGTAAGACACTT 58.344 39.130 0.00 0.00 37.72 3.16
2263 2758 5.804639 ACATTGGCATGAGTAAGACACTTA 58.195 37.500 0.00 0.00 37.72 2.24
2264 2759 5.877012 ACATTGGCATGAGTAAGACACTTAG 59.123 40.000 0.00 0.00 37.72 2.18
2265 2760 4.471904 TGGCATGAGTAAGACACTTAGG 57.528 45.455 0.00 0.00 37.72 2.69
2266 2761 3.197766 TGGCATGAGTAAGACACTTAGGG 59.802 47.826 0.00 0.00 37.72 3.53
2267 2762 3.432326 GGCATGAGTAAGACACTTAGGGG 60.432 52.174 0.00 0.00 37.72 4.79
2268 2763 3.798202 CATGAGTAAGACACTTAGGGGC 58.202 50.000 0.00 0.00 37.72 5.80
2269 2764 3.185880 TGAGTAAGACACTTAGGGGCT 57.814 47.619 0.00 0.00 37.72 5.19
2270 2765 2.832129 TGAGTAAGACACTTAGGGGCTG 59.168 50.000 0.00 0.00 37.72 4.85
2271 2766 2.832733 GAGTAAGACACTTAGGGGCTGT 59.167 50.000 0.00 0.00 37.72 4.40
2272 2767 3.248888 AGTAAGACACTTAGGGGCTGTT 58.751 45.455 0.00 0.00 31.59 3.16
2273 2768 2.861147 AAGACACTTAGGGGCTGTTC 57.139 50.000 0.00 0.00 0.00 3.18
2274 2769 0.608640 AGACACTTAGGGGCTGTTCG 59.391 55.000 0.00 0.00 0.00 3.95
2275 2770 0.391263 GACACTTAGGGGCTGTTCGG 60.391 60.000 0.00 0.00 0.00 4.30
2276 2771 1.745489 CACTTAGGGGCTGTTCGGC 60.745 63.158 0.00 0.00 37.49 5.54
2277 2772 2.511600 CTTAGGGGCTGTTCGGCG 60.512 66.667 0.00 0.00 39.52 6.46
2278 2773 4.090588 TTAGGGGCTGTTCGGCGG 62.091 66.667 7.21 0.00 39.52 6.13
2307 2802 4.373348 GCTCCGCGGTATATAAGAATCT 57.627 45.455 27.15 0.00 0.00 2.40
2308 2803 4.106197 GCTCCGCGGTATATAAGAATCTG 58.894 47.826 27.15 0.00 0.00 2.90
2309 2804 4.106029 TCCGCGGTATATAAGAATCTGC 57.894 45.455 27.15 0.00 0.00 4.26
2310 2805 3.508402 TCCGCGGTATATAAGAATCTGCA 59.492 43.478 27.15 0.00 0.00 4.41
2311 2806 3.859961 CCGCGGTATATAAGAATCTGCAG 59.140 47.826 19.50 7.63 0.00 4.41
2312 2807 4.380550 CCGCGGTATATAAGAATCTGCAGA 60.381 45.833 20.79 20.79 0.00 4.26
2313 2808 4.795795 CGCGGTATATAAGAATCTGCAGAG 59.204 45.833 22.96 4.50 0.00 3.35
2314 2809 5.620205 CGCGGTATATAAGAATCTGCAGAGT 60.620 44.000 22.96 20.63 0.00 3.24
2315 2810 6.403309 CGCGGTATATAAGAATCTGCAGAGTA 60.403 42.308 22.96 11.50 0.00 2.59
2316 2811 6.748198 GCGGTATATAAGAATCTGCAGAGTAC 59.252 42.308 22.96 12.07 0.00 2.73
2317 2812 7.251994 CGGTATATAAGAATCTGCAGAGTACC 58.748 42.308 22.96 19.13 0.00 3.34
2318 2813 7.251994 GGTATATAAGAATCTGCAGAGTACCG 58.748 42.308 22.96 0.00 0.00 4.02
2319 2814 6.902771 ATATAAGAATCTGCAGAGTACCGT 57.097 37.500 22.96 9.34 0.00 4.83
2320 2815 3.963428 AAGAATCTGCAGAGTACCGTT 57.037 42.857 22.96 10.19 0.00 4.44
2321 2816 3.963428 AGAATCTGCAGAGTACCGTTT 57.037 42.857 22.96 9.41 0.00 3.60
2322 2817 3.851098 AGAATCTGCAGAGTACCGTTTC 58.149 45.455 22.96 17.58 0.00 2.78
2323 2818 3.511934 AGAATCTGCAGAGTACCGTTTCT 59.488 43.478 22.96 19.45 0.00 2.52
2324 2819 3.512033 ATCTGCAGAGTACCGTTTCTC 57.488 47.619 22.96 0.00 0.00 2.87
2325 2820 2.515854 TCTGCAGAGTACCGTTTCTCT 58.484 47.619 13.74 0.00 41.04 3.10
2326 2821 2.488545 TCTGCAGAGTACCGTTTCTCTC 59.511 50.000 13.74 0.00 38.74 3.20
2327 2822 1.199327 TGCAGAGTACCGTTTCTCTCG 59.801 52.381 0.00 0.00 38.74 4.04
2328 2823 1.897641 CAGAGTACCGTTTCTCTCGC 58.102 55.000 0.00 0.00 38.74 5.03
2329 2824 1.469308 CAGAGTACCGTTTCTCTCGCT 59.531 52.381 0.00 0.00 38.74 4.93
2330 2825 1.738908 AGAGTACCGTTTCTCTCGCTC 59.261 52.381 0.00 0.00 36.45 5.03
2331 2826 0.810016 AGTACCGTTTCTCTCGCTCC 59.190 55.000 0.00 0.00 0.00 4.70
2332 2827 0.524862 GTACCGTTTCTCTCGCTCCA 59.475 55.000 0.00 0.00 0.00 3.86
2333 2828 0.524862 TACCGTTTCTCTCGCTCCAC 59.475 55.000 0.00 0.00 0.00 4.02
2334 2829 1.289066 CCGTTTCTCTCGCTCCACA 59.711 57.895 0.00 0.00 0.00 4.17
2335 2830 1.009389 CCGTTTCTCTCGCTCCACAC 61.009 60.000 0.00 0.00 0.00 3.82
2336 2831 0.039074 CGTTTCTCTCGCTCCACACT 60.039 55.000 0.00 0.00 0.00 3.55
2337 2832 1.603172 CGTTTCTCTCGCTCCACACTT 60.603 52.381 0.00 0.00 0.00 3.16
2338 2833 2.484889 GTTTCTCTCGCTCCACACTTT 58.515 47.619 0.00 0.00 0.00 2.66
2339 2834 2.872858 GTTTCTCTCGCTCCACACTTTT 59.127 45.455 0.00 0.00 0.00 2.27
2340 2835 2.910688 TCTCTCGCTCCACACTTTTT 57.089 45.000 0.00 0.00 0.00 1.94
2341 2836 4.330944 TTCTCTCGCTCCACACTTTTTA 57.669 40.909 0.00 0.00 0.00 1.52
2342 2837 4.330944 TCTCTCGCTCCACACTTTTTAA 57.669 40.909 0.00 0.00 0.00 1.52
2343 2838 4.056050 TCTCTCGCTCCACACTTTTTAAC 58.944 43.478 0.00 0.00 0.00 2.01
2344 2839 4.058817 CTCTCGCTCCACACTTTTTAACT 58.941 43.478 0.00 0.00 0.00 2.24
2345 2840 3.807622 TCTCGCTCCACACTTTTTAACTG 59.192 43.478 0.00 0.00 0.00 3.16
2346 2841 2.875933 TCGCTCCACACTTTTTAACTGG 59.124 45.455 0.00 0.00 0.00 4.00
2347 2842 2.875933 CGCTCCACACTTTTTAACTGGA 59.124 45.455 0.00 0.00 0.00 3.86
2348 2843 3.314080 CGCTCCACACTTTTTAACTGGAA 59.686 43.478 0.00 0.00 30.54 3.53
2349 2844 4.607955 GCTCCACACTTTTTAACTGGAAC 58.392 43.478 0.00 0.00 30.54 3.62
2350 2845 4.338400 GCTCCACACTTTTTAACTGGAACT 59.662 41.667 0.00 0.00 30.54 3.01
2351 2846 5.163550 GCTCCACACTTTTTAACTGGAACTT 60.164 40.000 0.00 0.00 30.54 2.66
2352 2847 6.445357 TCCACACTTTTTAACTGGAACTTC 57.555 37.500 0.00 0.00 0.00 3.01
2353 2848 5.065474 TCCACACTTTTTAACTGGAACTTCG 59.935 40.000 0.00 0.00 0.00 3.79
2354 2849 5.163693 CCACACTTTTTAACTGGAACTTCGT 60.164 40.000 0.00 0.00 0.00 3.85
2355 2850 5.963586 CACACTTTTTAACTGGAACTTCGTC 59.036 40.000 0.00 0.00 0.00 4.20
2356 2851 5.195379 CACTTTTTAACTGGAACTTCGTCG 58.805 41.667 0.00 0.00 0.00 5.12
2357 2852 5.005971 CACTTTTTAACTGGAACTTCGTCGA 59.994 40.000 0.00 0.00 0.00 4.20
2358 2853 5.006068 ACTTTTTAACTGGAACTTCGTCGAC 59.994 40.000 5.18 5.18 0.00 4.20
2359 2854 3.996150 TTAACTGGAACTTCGTCGACT 57.004 42.857 14.70 0.00 0.00 4.18
2360 2855 2.418983 AACTGGAACTTCGTCGACTC 57.581 50.000 14.70 3.47 0.00 3.36
2361 2856 0.597072 ACTGGAACTTCGTCGACTCC 59.403 55.000 14.70 13.50 0.00 3.85
2362 2857 0.454620 CTGGAACTTCGTCGACTCCG 60.455 60.000 14.70 0.00 37.07 4.63
2363 2858 1.154073 GGAACTTCGTCGACTCCGG 60.154 63.158 14.70 0.00 36.24 5.14
2364 2859 1.154073 GAACTTCGTCGACTCCGGG 60.154 63.158 14.70 0.00 36.24 5.73
2365 2860 1.580845 GAACTTCGTCGACTCCGGGA 61.581 60.000 14.70 0.00 36.24 5.14
2366 2861 1.584380 AACTTCGTCGACTCCGGGAG 61.584 60.000 22.40 22.40 36.24 4.30
2367 2862 3.398353 CTTCGTCGACTCCGGGAGC 62.398 68.421 23.84 14.97 36.24 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 23 1.115326 GTGCCCCCAATCATAAGGCC 61.115 60.000 0.00 0.00 43.18 5.19
23 25 0.261402 TGGTGCCCCCAATCATAAGG 59.739 55.000 0.00 0.00 41.50 2.69
48 50 0.841289 TCCTCGGTTTTGTCTTGGGT 59.159 50.000 0.00 0.00 0.00 4.51
69 71 1.298788 GTGTTTTTGTCGCCCGTGG 60.299 57.895 0.00 0.00 0.00 4.94
72 74 1.164041 AGGAGTGTTTTTGTCGCCCG 61.164 55.000 0.00 0.00 0.00 6.13
73 75 0.310854 CAGGAGTGTTTTTGTCGCCC 59.689 55.000 0.00 0.00 0.00 6.13
107 109 2.202362 CCTGACACGTCGCTCTCG 60.202 66.667 0.00 0.00 0.00 4.04
129 132 3.737172 CCCCGCCTGCTGTTTTCG 61.737 66.667 0.00 0.00 0.00 3.46
231 236 0.390472 GTGAGTACTGACAGCTGGCC 60.390 60.000 19.23 9.36 0.00 5.36
324 329 4.832608 GCCGGTTCCCCAGTAGCG 62.833 72.222 1.90 0.00 34.51 4.26
325 330 3.387225 GAGCCGGTTCCCCAGTAGC 62.387 68.421 7.13 0.00 0.00 3.58
326 331 2.901042 GAGCCGGTTCCCCAGTAG 59.099 66.667 7.13 0.00 0.00 2.57
327 332 3.072468 CGAGCCGGTTCCCCAGTA 61.072 66.667 13.19 0.00 0.00 2.74
329 334 4.452733 GACGAGCCGGTTCCCCAG 62.453 72.222 13.19 0.86 0.00 4.45
330 335 3.588817 TAGACGAGCCGGTTCCCCA 62.589 63.158 13.19 0.00 0.00 4.96
331 336 2.757099 TAGACGAGCCGGTTCCCC 60.757 66.667 13.19 4.64 0.00 4.81
332 337 2.493501 GTAGACGAGCCGGTTCCC 59.506 66.667 13.19 5.01 0.00 3.97
333 338 2.493501 GGTAGACGAGCCGGTTCC 59.506 66.667 13.19 0.00 0.00 3.62
353 358 1.745489 CCCCTACCGTGCTTTCAGC 60.745 63.158 0.00 0.00 42.82 4.26
354 359 0.108138 CTCCCCTACCGTGCTTTCAG 60.108 60.000 0.00 0.00 0.00 3.02
355 360 1.980052 CTCCCCTACCGTGCTTTCA 59.020 57.895 0.00 0.00 0.00 2.69
356 361 1.449778 GCTCCCCTACCGTGCTTTC 60.450 63.158 0.00 0.00 0.00 2.62
357 362 0.616679 TAGCTCCCCTACCGTGCTTT 60.617 55.000 0.00 0.00 35.47 3.51
358 363 1.001248 TAGCTCCCCTACCGTGCTT 59.999 57.895 0.00 0.00 35.47 3.91
359 364 1.757340 GTAGCTCCCCTACCGTGCT 60.757 63.158 0.00 0.00 40.47 4.40
360 365 2.056223 TGTAGCTCCCCTACCGTGC 61.056 63.158 0.00 0.00 44.77 5.34
361 366 0.683504 AGTGTAGCTCCCCTACCGTG 60.684 60.000 0.00 0.00 44.77 4.94
362 367 0.921896 TAGTGTAGCTCCCCTACCGT 59.078 55.000 0.00 0.00 44.77 4.83
363 368 1.606903 CTAGTGTAGCTCCCCTACCG 58.393 60.000 0.00 0.00 44.77 4.02
374 379 0.460987 GGCACTGCAGGCTAGTGTAG 60.461 60.000 19.93 4.34 45.60 2.74
375 380 0.904865 AGGCACTGCAGGCTAGTGTA 60.905 55.000 19.93 0.00 45.60 2.90
376 381 2.177594 GAGGCACTGCAGGCTAGTGT 62.178 60.000 19.93 0.65 45.60 3.55
377 382 1.449246 GAGGCACTGCAGGCTAGTG 60.449 63.158 19.93 12.16 45.32 2.74
378 383 1.611851 AGAGGCACTGCAGGCTAGT 60.612 57.895 19.93 7.64 45.32 2.57
379 384 1.153409 CAGAGGCACTGCAGGCTAG 60.153 63.158 19.93 6.02 45.32 3.42
380 385 2.984623 CAGAGGCACTGCAGGCTA 59.015 61.111 19.93 0.00 45.32 3.93
388 393 3.567164 CAGTGAAAAATCACAGAGGCACT 59.433 43.478 11.17 0.00 42.41 4.40
389 394 3.854784 GCAGTGAAAAATCACAGAGGCAC 60.855 47.826 11.17 0.00 42.68 5.01
390 395 2.294233 GCAGTGAAAAATCACAGAGGCA 59.706 45.455 11.17 0.00 42.68 4.75
391 396 2.666619 CGCAGTGAAAAATCACAGAGGC 60.667 50.000 11.17 7.89 42.68 4.70
392 397 2.666619 GCGCAGTGAAAAATCACAGAGG 60.667 50.000 0.30 1.40 42.68 3.69
393 398 2.578495 GCGCAGTGAAAAATCACAGAG 58.422 47.619 0.30 6.29 42.68 3.35
394 399 1.069973 CGCGCAGTGAAAAATCACAGA 60.070 47.619 8.75 0.00 43.07 3.41
395 400 1.321016 CGCGCAGTGAAAAATCACAG 58.679 50.000 8.75 4.59 43.07 3.66
396 401 0.660005 GCGCGCAGTGAAAAATCACA 60.660 50.000 29.10 0.00 43.07 3.58
397 402 0.385974 AGCGCGCAGTGAAAAATCAC 60.386 50.000 35.10 0.76 43.07 3.06
398 403 1.136085 GTAGCGCGCAGTGAAAAATCA 60.136 47.619 35.10 0.00 43.07 2.57
399 404 1.136085 TGTAGCGCGCAGTGAAAAATC 60.136 47.619 35.10 10.39 43.07 2.17
400 405 0.871722 TGTAGCGCGCAGTGAAAAAT 59.128 45.000 35.10 11.76 43.07 1.82
401 406 0.871722 ATGTAGCGCGCAGTGAAAAA 59.128 45.000 35.10 9.74 43.07 1.94
402 407 0.165727 CATGTAGCGCGCAGTGAAAA 59.834 50.000 35.10 11.46 43.07 2.29
403 408 0.669012 TCATGTAGCGCGCAGTGAAA 60.669 50.000 35.10 10.91 43.07 2.69
404 409 0.669012 TTCATGTAGCGCGCAGTGAA 60.669 50.000 35.10 29.16 43.07 3.18
405 410 1.080161 TTCATGTAGCGCGCAGTGA 60.080 52.632 35.10 25.58 43.07 3.41
406 411 1.059369 GTTCATGTAGCGCGCAGTG 59.941 57.895 35.10 23.78 43.41 3.66
407 412 1.078759 GAGTTCATGTAGCGCGCAGT 61.079 55.000 35.10 16.87 0.00 4.40
408 413 1.078201 TGAGTTCATGTAGCGCGCAG 61.078 55.000 35.10 16.90 0.00 5.18
409 414 0.460109 ATGAGTTCATGTAGCGCGCA 60.460 50.000 35.10 16.82 34.83 6.09
410 415 0.042708 CATGAGTTCATGTAGCGCGC 60.043 55.000 26.66 26.66 46.40 6.86
419 424 3.817084 CACCACACTGTTCATGAGTTCAT 59.183 43.478 0.00 0.00 36.96 2.57
420 425 3.205338 CACCACACTGTTCATGAGTTCA 58.795 45.455 0.00 0.00 0.00 3.18
421 426 2.031682 GCACCACACTGTTCATGAGTTC 60.032 50.000 0.00 0.00 0.00 3.01
422 427 1.949525 GCACCACACTGTTCATGAGTT 59.050 47.619 0.00 0.00 0.00 3.01
423 428 1.141657 AGCACCACACTGTTCATGAGT 59.858 47.619 0.00 0.00 0.00 3.41
424 429 1.888215 AGCACCACACTGTTCATGAG 58.112 50.000 0.00 0.00 0.00 2.90
425 430 2.103941 TGTAGCACCACACTGTTCATGA 59.896 45.455 0.00 0.00 0.00 3.07
426 431 2.481568 CTGTAGCACCACACTGTTCATG 59.518 50.000 0.00 0.00 0.00 3.07
427 432 2.550855 CCTGTAGCACCACACTGTTCAT 60.551 50.000 0.00 0.00 0.00 2.57
428 433 1.202639 CCTGTAGCACCACACTGTTCA 60.203 52.381 0.00 0.00 0.00 3.18
429 434 1.512926 CCTGTAGCACCACACTGTTC 58.487 55.000 0.00 0.00 0.00 3.18
430 435 0.108585 CCCTGTAGCACCACACTGTT 59.891 55.000 0.00 0.00 0.00 3.16
431 436 1.054406 ACCCTGTAGCACCACACTGT 61.054 55.000 0.00 0.00 0.00 3.55
432 437 0.603707 CACCCTGTAGCACCACACTG 60.604 60.000 0.00 0.00 0.00 3.66
433 438 1.754745 CACCCTGTAGCACCACACT 59.245 57.895 0.00 0.00 0.00 3.55
434 439 1.966451 GCACCCTGTAGCACCACAC 60.966 63.158 0.00 0.00 0.00 3.82
435 440 2.429930 GCACCCTGTAGCACCACA 59.570 61.111 0.00 0.00 0.00 4.17
436 441 2.359975 GGCACCCTGTAGCACCAC 60.360 66.667 0.00 0.00 0.00 4.16
449 454 2.814280 ATATGTACTGTAGCGGGCAC 57.186 50.000 0.00 0.00 0.00 5.01
450 455 3.830744 AAATATGTACTGTAGCGGGCA 57.169 42.857 0.00 0.00 0.00 5.36
451 456 6.869913 TGTAATAAATATGTACTGTAGCGGGC 59.130 38.462 0.00 0.00 0.00 6.13
452 457 8.086522 ACTGTAATAAATATGTACTGTAGCGGG 58.913 37.037 0.00 0.00 30.84 6.13
475 480 3.150848 TGCACTGTAGCGAATCTACTG 57.849 47.619 7.22 7.22 46.15 2.74
476 481 4.580995 ACTATGCACTGTAGCGAATCTACT 59.419 41.667 0.00 0.00 46.15 2.57
477 482 4.677378 CACTATGCACTGTAGCGAATCTAC 59.323 45.833 0.00 0.00 46.17 2.59
478 483 4.793028 GCACTATGCACTGTAGCGAATCTA 60.793 45.833 0.00 0.00 44.26 1.98
479 484 3.711086 CACTATGCACTGTAGCGAATCT 58.289 45.455 0.00 0.00 37.31 2.40
480 485 2.219674 GCACTATGCACTGTAGCGAATC 59.780 50.000 0.00 0.00 44.26 2.52
481 486 2.205074 GCACTATGCACTGTAGCGAAT 58.795 47.619 0.00 0.00 44.26 3.34
482 487 1.640428 GCACTATGCACTGTAGCGAA 58.360 50.000 0.00 0.00 44.26 4.70
483 488 3.345737 GCACTATGCACTGTAGCGA 57.654 52.632 0.00 0.00 44.26 4.93
493 498 3.863407 GGGCCCTATAGCACTATGC 57.137 57.895 17.04 0.00 45.46 3.14
498 503 1.072159 CTGCAGGGCCCTATAGCAC 59.928 63.158 27.10 12.87 35.96 4.40
499 504 1.384502 ACTGCAGGGCCCTATAGCA 60.385 57.895 28.37 28.37 0.00 3.49
500 505 1.072159 CACTGCAGGGCCCTATAGC 59.928 63.158 28.13 24.96 0.00 2.97
501 506 1.072159 GCACTGCAGGGCCCTATAG 59.928 63.158 31.20 26.52 0.00 1.31
502 507 2.452064 GGCACTGCAGGGCCCTATA 61.452 63.158 44.46 15.86 44.53 1.31
503 508 3.813724 GGCACTGCAGGGCCCTAT 61.814 66.667 44.46 6.85 44.53 2.57
508 513 3.060615 CAGAAGGCACTGCAGGGC 61.061 66.667 33.26 33.26 40.86 5.19
514 519 1.372087 GGGAATCGCAGAAGGCACTG 61.372 60.000 7.23 7.23 43.58 3.66
515 520 1.078143 GGGAATCGCAGAAGGCACT 60.078 57.895 0.00 0.00 43.58 4.40
516 521 1.377202 TGGGAATCGCAGAAGGCAC 60.377 57.895 0.00 0.00 43.58 5.01
517 522 1.377202 GTGGGAATCGCAGAAGGCA 60.377 57.895 0.00 0.00 43.58 4.75
518 523 1.078143 AGTGGGAATCGCAGAAGGC 60.078 57.895 0.00 0.00 43.58 4.35
519 524 1.372087 GCAGTGGGAATCGCAGAAGG 61.372 60.000 0.00 0.00 43.58 3.46
520 525 1.699656 CGCAGTGGGAATCGCAGAAG 61.700 60.000 0.00 0.00 43.58 2.85
521 526 1.741401 CGCAGTGGGAATCGCAGAA 60.741 57.895 0.00 0.00 43.58 3.02
522 527 2.125552 CGCAGTGGGAATCGCAGA 60.126 61.111 0.00 0.00 45.75 4.26
523 528 2.434884 ACGCAGTGGGAATCGCAG 60.435 61.111 14.98 0.00 42.51 5.18
534 539 1.215647 GCTACAGTAGCCACGCAGT 59.784 57.895 20.53 0.00 45.95 4.40
535 540 4.094684 GCTACAGTAGCCACGCAG 57.905 61.111 20.53 0.00 45.95 5.18
543 548 1.038130 ACGGCAGGGAGCTACAGTAG 61.038 60.000 0.00 2.85 44.79 2.57
544 549 1.000019 ACGGCAGGGAGCTACAGTA 60.000 57.895 0.00 0.00 44.79 2.74
545 550 2.283966 ACGGCAGGGAGCTACAGT 60.284 61.111 0.00 0.00 44.79 3.55
546 551 2.185350 CACGGCAGGGAGCTACAG 59.815 66.667 0.00 0.00 44.79 2.74
547 552 4.082523 GCACGGCAGGGAGCTACA 62.083 66.667 0.00 0.00 44.79 2.74
548 553 4.840005 GGCACGGCAGGGAGCTAC 62.840 72.222 0.00 0.00 44.79 3.58
552 557 3.965539 CTGAAGGCACGGCAGGGAG 62.966 68.421 0.00 0.00 32.37 4.30
553 558 4.020617 CTGAAGGCACGGCAGGGA 62.021 66.667 0.00 0.00 32.37 4.20
563 568 1.805945 CGTCTACCGTGCTGAAGGC 60.806 63.158 0.00 0.00 42.22 4.35
564 569 0.179161 CTCGTCTACCGTGCTGAAGG 60.179 60.000 0.00 0.00 37.94 3.46
565 570 3.314339 CTCGTCTACCGTGCTGAAG 57.686 57.895 0.00 0.00 37.94 3.02
574 579 2.493501 GGAACCGGCTCGTCTACC 59.506 66.667 0.00 0.00 0.00 3.18
575 580 2.493501 GGGAACCGGCTCGTCTAC 59.506 66.667 0.00 0.00 40.86 2.59
620 625 4.752594 GGGCAGGGGGAGGTGGTA 62.753 72.222 0.00 0.00 0.00 3.25
695 700 1.681264 GCCAGGTGGTATTTATGCACC 59.319 52.381 0.00 0.00 37.57 5.01
734 739 2.347490 GCCCTGAACTTCTCCGCA 59.653 61.111 0.00 0.00 0.00 5.69
963 968 1.403679 CCGCTCTCTCTCGATGAACTT 59.596 52.381 0.00 0.00 0.00 2.66
964 969 1.021202 CCGCTCTCTCTCGATGAACT 58.979 55.000 0.00 0.00 0.00 3.01
965 970 1.002900 CTCCGCTCTCTCTCGATGAAC 60.003 57.143 0.00 0.00 0.00 3.18
967 972 1.163420 GCTCCGCTCTCTCTCGATGA 61.163 60.000 0.00 0.00 0.00 2.92
968 973 1.282570 GCTCCGCTCTCTCTCGATG 59.717 63.158 0.00 0.00 0.00 3.84
974 979 4.244802 CGTCCGCTCCGCTCTCTC 62.245 72.222 0.00 0.00 0.00 3.20
987 992 4.492160 TCCATGCTCGCGACGTCC 62.492 66.667 3.71 1.77 0.00 4.79
988 993 2.951745 CTCCATGCTCGCGACGTC 60.952 66.667 3.71 5.18 0.00 4.34
989 994 4.498520 CCTCCATGCTCGCGACGT 62.499 66.667 3.71 0.51 0.00 4.34
990 995 4.498520 ACCTCCATGCTCGCGACG 62.499 66.667 3.71 2.50 0.00 5.12
991 996 2.887568 CACCTCCATGCTCGCGAC 60.888 66.667 3.71 2.83 0.00 5.19
992 997 4.147449 CCACCTCCATGCTCGCGA 62.147 66.667 9.26 9.26 0.00 5.87
993 998 4.147449 TCCACCTCCATGCTCGCG 62.147 66.667 0.00 0.00 0.00 5.87
1362 1367 1.355563 GATCGATCAGGCGTCGTCA 59.644 57.895 20.52 0.00 39.91 4.35
1365 1370 3.094058 GCGATCGATCAGGCGTCG 61.094 66.667 24.40 11.76 40.30 5.12
1368 1373 1.154131 CTAGGCGATCGATCAGGCG 60.154 63.158 24.40 12.57 33.60 5.52
1371 1376 1.154131 CGGCTAGGCGATCGATCAG 60.154 63.158 32.94 17.27 0.00 2.90
1504 1524 5.239525 AGCTAGGACGCAAATTATTCATTCC 59.760 40.000 0.00 0.00 0.00 3.01
1529 1549 3.998099 CTCCTGTCTCGAGCAATCATA 57.002 47.619 7.81 0.00 0.00 2.15
1551 1571 3.497118 CTCGATCATACGGAGCTTGATC 58.503 50.000 13.21 13.21 41.40 2.92
1597 1617 5.049198 CCGGATACTACTACAAATGCTACGA 60.049 44.000 0.00 0.00 0.00 3.43
1712 1739 6.867519 TTACATGTCCTTCCATCTGAGTAA 57.132 37.500 0.00 0.00 0.00 2.24
1714 1741 5.249393 ACTTTACATGTCCTTCCATCTGAGT 59.751 40.000 0.00 0.00 0.00 3.41
1715 1742 5.738909 ACTTTACATGTCCTTCCATCTGAG 58.261 41.667 0.00 0.00 0.00 3.35
1721 1748 4.286032 AGCACTACTTTACATGTCCTTCCA 59.714 41.667 0.00 0.00 0.00 3.53
1727 1754 6.727824 ACAATGAGCACTACTTTACATGTC 57.272 37.500 0.00 0.00 0.00 3.06
1728 1755 7.386851 ACTACAATGAGCACTACTTTACATGT 58.613 34.615 2.69 2.69 0.00 3.21
1797 1922 3.431673 TGTGAGGACATGGCAATACAA 57.568 42.857 0.00 0.00 0.00 2.41
1815 1940 4.796606 AGCCTAATTACTTGCATCCATGT 58.203 39.130 0.00 0.00 34.23 3.21
1821 1946 7.839907 TGAAAATCAAGCCTAATTACTTGCAT 58.160 30.769 9.80 4.20 42.41 3.96
1828 1953 8.635765 ACTCTGTTGAAAATCAAGCCTAATTA 57.364 30.769 0.00 0.00 37.00 1.40
1844 2339 5.179368 CCGCTTTATTTTCTGACTCTGTTGA 59.821 40.000 0.00 0.00 0.00 3.18
1851 2346 4.982295 GCAAAACCGCTTTATTTTCTGACT 59.018 37.500 0.00 0.00 0.00 3.41
1852 2347 4.982295 AGCAAAACCGCTTTATTTTCTGAC 59.018 37.500 0.00 0.00 39.99 3.51
1853 2348 5.195001 AGCAAAACCGCTTTATTTTCTGA 57.805 34.783 0.00 0.00 39.99 3.27
1854 2349 8.856490 ATATAGCAAAACCGCTTTATTTTCTG 57.144 30.769 0.00 0.00 43.56 3.02
1859 2354 8.349983 CCTGTTATATAGCAAAACCGCTTTATT 58.650 33.333 0.71 0.00 43.56 1.40
1861 2356 6.824704 ACCTGTTATATAGCAAAACCGCTTTA 59.175 34.615 0.71 0.00 43.56 1.85
1863 2358 5.065988 CACCTGTTATATAGCAAAACCGCTT 59.934 40.000 0.71 0.00 43.56 4.68
1864 2359 4.574828 CACCTGTTATATAGCAAAACCGCT 59.425 41.667 0.71 0.00 46.26 5.52
1866 2361 4.261031 GGCACCTGTTATATAGCAAAACCG 60.261 45.833 0.71 0.00 0.00 4.44
1867 2362 4.887655 AGGCACCTGTTATATAGCAAAACC 59.112 41.667 0.71 1.25 0.00 3.27
1868 2363 5.588648 TCAGGCACCTGTTATATAGCAAAAC 59.411 40.000 16.12 0.00 43.96 2.43
1869 2364 5.750524 TCAGGCACCTGTTATATAGCAAAA 58.249 37.500 16.12 0.00 43.96 2.44
1870 2365 5.366482 TCAGGCACCTGTTATATAGCAAA 57.634 39.130 16.12 0.00 43.96 3.68
1886 2381 8.840321 GTGAGAGCTAAAAATAATAATCAGGCA 58.160 33.333 0.00 0.00 0.00 4.75
1888 2383 8.787852 GGGTGAGAGCTAAAAATAATAATCAGG 58.212 37.037 0.00 0.00 0.00 3.86
1889 2384 8.499162 CGGGTGAGAGCTAAAAATAATAATCAG 58.501 37.037 0.00 0.00 0.00 2.90
1893 2388 8.974060 ATTCGGGTGAGAGCTAAAAATAATAA 57.026 30.769 0.00 0.00 0.00 1.40
1894 2389 8.974060 AATTCGGGTGAGAGCTAAAAATAATA 57.026 30.769 0.00 0.00 0.00 0.98
1896 2391 7.535139 CAAATTCGGGTGAGAGCTAAAAATAA 58.465 34.615 0.00 0.00 0.00 1.40
1897 2392 6.404293 GCAAATTCGGGTGAGAGCTAAAAATA 60.404 38.462 0.00 0.00 0.00 1.40
1899 2394 4.320935 GCAAATTCGGGTGAGAGCTAAAAA 60.321 41.667 0.00 0.00 0.00 1.94
1901 2396 2.747446 GCAAATTCGGGTGAGAGCTAAA 59.253 45.455 0.00 0.00 0.00 1.85
1902 2397 2.290008 TGCAAATTCGGGTGAGAGCTAA 60.290 45.455 0.00 0.00 0.00 3.09
1913 2408 3.613737 GTGAATGATGGTTGCAAATTCGG 59.386 43.478 0.00 0.00 31.33 4.30
1914 2409 4.236147 TGTGAATGATGGTTGCAAATTCG 58.764 39.130 0.00 0.00 31.33 3.34
1919 2414 5.476254 TGAACTATGTGAATGATGGTTGCAA 59.524 36.000 0.00 0.00 0.00 4.08
1943 2438 2.838202 ACAGACCCCAAGTACGAATCAT 59.162 45.455 0.00 0.00 0.00 2.45
1959 2454 5.411669 CCAGTCAACTATAACCCAAACAGAC 59.588 44.000 0.00 0.00 0.00 3.51
1970 2465 9.263446 AGTCAACTATAACCCAGTCAACTATAA 57.737 33.333 0.00 0.00 0.00 0.98
1971 2466 8.692710 CAGTCAACTATAACCCAGTCAACTATA 58.307 37.037 0.00 0.00 0.00 1.31
1972 2467 7.399191 TCAGTCAACTATAACCCAGTCAACTAT 59.601 37.037 0.00 0.00 0.00 2.12
1973 2468 6.722590 TCAGTCAACTATAACCCAGTCAACTA 59.277 38.462 0.00 0.00 0.00 2.24
1974 2469 5.542635 TCAGTCAACTATAACCCAGTCAACT 59.457 40.000 0.00 0.00 0.00 3.16
1975 2470 5.790593 TCAGTCAACTATAACCCAGTCAAC 58.209 41.667 0.00 0.00 0.00 3.18
1976 2471 6.013725 ACATCAGTCAACTATAACCCAGTCAA 60.014 38.462 0.00 0.00 0.00 3.18
1977 2472 5.483937 ACATCAGTCAACTATAACCCAGTCA 59.516 40.000 0.00 0.00 0.00 3.41
1978 2473 5.978814 ACATCAGTCAACTATAACCCAGTC 58.021 41.667 0.00 0.00 0.00 3.51
1979 2474 7.180408 AGTTACATCAGTCAACTATAACCCAGT 59.820 37.037 0.00 0.00 30.89 4.00
1980 2475 7.556844 AGTTACATCAGTCAACTATAACCCAG 58.443 38.462 0.00 0.00 30.89 4.45
1981 2476 7.490657 AGTTACATCAGTCAACTATAACCCA 57.509 36.000 0.00 0.00 30.89 4.51
1982 2477 8.788325 AAAGTTACATCAGTCAACTATAACCC 57.212 34.615 0.00 0.00 32.35 4.11
1999 2494 8.855279 CAAAATCGACTGAAAACAAAAGTTACA 58.145 29.630 0.00 0.00 0.00 2.41
2029 2524 0.602905 CGGACTGAAACCTTTCCGCT 60.603 55.000 0.00 0.00 44.16 5.52
2032 2527 3.736720 ACTAACGGACTGAAACCTTTCC 58.263 45.455 0.00 0.00 36.36 3.13
2033 2528 4.629092 AGACTAACGGACTGAAACCTTTC 58.371 43.478 0.00 0.00 37.69 2.62
2039 2534 3.830755 AGCCTAAGACTAACGGACTGAAA 59.169 43.478 0.00 0.00 0.00 2.69
2045 2540 3.285484 CCACTAGCCTAAGACTAACGGA 58.715 50.000 0.00 0.00 0.00 4.69
2077 2572 2.498885 ACAAATGGACTACTACCGGACC 59.501 50.000 9.46 0.05 0.00 4.46
2092 2587 7.007313 ACAAGCATCAACTGAAAAACAAATG 57.993 32.000 0.00 0.00 0.00 2.32
2104 2599 3.450578 CAAGCAACAACAAGCATCAACT 58.549 40.909 0.00 0.00 0.00 3.16
2134 2629 1.523758 ATCTTGCGAACACAGAACCC 58.476 50.000 0.00 0.00 0.00 4.11
2135 2630 2.290641 ACAATCTTGCGAACACAGAACC 59.709 45.455 0.00 0.00 0.00 3.62
2136 2631 3.545633 GACAATCTTGCGAACACAGAAC 58.454 45.455 0.00 0.00 0.00 3.01
2137 2632 2.220824 CGACAATCTTGCGAACACAGAA 59.779 45.455 0.00 0.00 32.28 3.02
2138 2633 1.792367 CGACAATCTTGCGAACACAGA 59.208 47.619 0.00 0.00 32.28 3.41
2139 2634 1.792367 TCGACAATCTTGCGAACACAG 59.208 47.619 6.88 0.00 35.17 3.66
2140 2635 1.859383 TCGACAATCTTGCGAACACA 58.141 45.000 6.88 0.00 35.17 3.72
2141 2636 2.221055 ACTTCGACAATCTTGCGAACAC 59.779 45.455 13.96 0.00 39.68 3.32
2142 2637 2.220824 CACTTCGACAATCTTGCGAACA 59.779 45.455 13.96 1.90 39.68 3.18
2143 2638 2.827555 CACTTCGACAATCTTGCGAAC 58.172 47.619 13.96 0.00 39.68 3.95
2144 2639 1.194547 GCACTTCGACAATCTTGCGAA 59.805 47.619 15.83 15.83 41.05 4.70
2145 2640 0.790207 GCACTTCGACAATCTTGCGA 59.210 50.000 0.00 5.69 35.87 5.10
2146 2641 0.792640 AGCACTTCGACAATCTTGCG 59.207 50.000 0.00 0.00 35.10 4.85
2147 2642 2.481952 AGAAGCACTTCGACAATCTTGC 59.518 45.455 4.81 0.00 43.97 4.01
2148 2643 4.024556 ACAAGAAGCACTTCGACAATCTTG 60.025 41.667 15.36 15.36 44.73 3.02
2149 2644 4.130118 ACAAGAAGCACTTCGACAATCTT 58.870 39.130 4.81 0.00 43.97 2.40
2150 2645 3.733337 ACAAGAAGCACTTCGACAATCT 58.267 40.909 4.81 0.00 43.97 2.40
2151 2646 3.422343 CGACAAGAAGCACTTCGACAATC 60.422 47.826 4.81 0.48 43.97 2.67
2152 2647 2.476619 CGACAAGAAGCACTTCGACAAT 59.523 45.455 4.81 0.00 43.97 2.71
2153 2648 1.858458 CGACAAGAAGCACTTCGACAA 59.142 47.619 4.81 0.00 43.97 3.18
2154 2649 1.202371 ACGACAAGAAGCACTTCGACA 60.202 47.619 4.81 0.00 43.97 4.35
2155 2650 1.488527 ACGACAAGAAGCACTTCGAC 58.511 50.000 4.81 0.00 43.97 4.20
2156 2651 2.658285 GTACGACAAGAAGCACTTCGA 58.342 47.619 4.81 0.00 43.97 3.71
2157 2652 1.382419 CGTACGACAAGAAGCACTTCG 59.618 52.381 10.44 0.00 43.97 3.79
2158 2653 1.124477 GCGTACGACAAGAAGCACTTC 59.876 52.381 21.65 2.04 36.61 3.01
2159 2654 1.137513 GCGTACGACAAGAAGCACTT 58.862 50.000 21.65 0.00 39.70 3.16
2160 2655 0.031585 TGCGTACGACAAGAAGCACT 59.968 50.000 21.65 0.00 0.00 4.40
2161 2656 0.161024 GTGCGTACGACAAGAAGCAC 59.839 55.000 21.65 10.89 46.03 4.40
2162 2657 2.513159 GTGCGTACGACAAGAAGCA 58.487 52.632 21.65 0.97 0.00 3.91
2173 2668 5.287752 TGAGTCTCATTTATTTCGTGCGTAC 59.712 40.000 0.00 0.00 0.00 3.67
2174 2669 5.404096 TGAGTCTCATTTATTTCGTGCGTA 58.596 37.500 0.00 0.00 0.00 4.42
2175 2670 4.242475 TGAGTCTCATTTATTTCGTGCGT 58.758 39.130 0.00 0.00 0.00 5.24
2176 2671 4.840401 TGAGTCTCATTTATTTCGTGCG 57.160 40.909 0.00 0.00 0.00 5.34
2177 2672 7.243487 TGAATTGAGTCTCATTTATTTCGTGC 58.757 34.615 2.68 0.00 0.00 5.34
2178 2673 9.778993 AATGAATTGAGTCTCATTTATTTCGTG 57.221 29.630 2.68 0.00 38.79 4.35
2184 2679 9.994432 GACGAAAATGAATTGAGTCTCATTTAT 57.006 29.630 15.40 8.76 46.52 1.40
2185 2680 8.998377 TGACGAAAATGAATTGAGTCTCATTTA 58.002 29.630 15.40 0.00 46.52 1.40
2187 2682 7.439157 TGACGAAAATGAATTGAGTCTCATT 57.561 32.000 2.68 0.00 42.67 2.57
2188 2683 7.120285 ACATGACGAAAATGAATTGAGTCTCAT 59.880 33.333 2.68 0.00 33.66 2.90
2189 2684 6.427853 ACATGACGAAAATGAATTGAGTCTCA 59.572 34.615 0.00 0.00 32.58 3.27
2190 2685 6.835914 ACATGACGAAAATGAATTGAGTCTC 58.164 36.000 0.00 0.00 32.58 3.36
2191 2686 6.808008 ACATGACGAAAATGAATTGAGTCT 57.192 33.333 0.00 0.00 32.58 3.24
2192 2687 7.379529 ACAAACATGACGAAAATGAATTGAGTC 59.620 33.333 0.00 0.00 33.58 3.36
2193 2688 7.167968 CACAAACATGACGAAAATGAATTGAGT 59.832 33.333 0.00 0.00 33.58 3.41
2194 2689 7.167968 ACACAAACATGACGAAAATGAATTGAG 59.832 33.333 0.00 14.01 33.58 3.02
2195 2690 6.977502 ACACAAACATGACGAAAATGAATTGA 59.022 30.769 0.00 0.00 33.58 2.57
2196 2691 7.164226 ACACAAACATGACGAAAATGAATTG 57.836 32.000 0.00 4.40 34.53 2.32
2197 2692 8.914654 CATACACAAACATGACGAAAATGAATT 58.085 29.630 0.00 0.00 0.00 2.17
2198 2693 7.062138 GCATACACAAACATGACGAAAATGAAT 59.938 33.333 0.00 0.00 0.00 2.57
2199 2694 6.362016 GCATACACAAACATGACGAAAATGAA 59.638 34.615 0.00 0.00 0.00 2.57
2200 2695 5.855925 GCATACACAAACATGACGAAAATGA 59.144 36.000 0.00 0.00 0.00 2.57
2201 2696 5.628606 TGCATACACAAACATGACGAAAATG 59.371 36.000 0.00 0.00 0.00 2.32
2202 2697 5.629020 GTGCATACACAAACATGACGAAAAT 59.371 36.000 0.00 0.00 46.61 1.82
2203 2698 4.973051 GTGCATACACAAACATGACGAAAA 59.027 37.500 0.00 0.00 46.61 2.29
2204 2699 4.532276 GTGCATACACAAACATGACGAAA 58.468 39.130 0.00 0.00 46.61 3.46
2205 2700 4.140518 GTGCATACACAAACATGACGAA 57.859 40.909 0.00 0.00 46.61 3.85
2206 2701 3.804518 GTGCATACACAAACATGACGA 57.195 42.857 0.00 0.00 46.61 4.20
2217 2712 1.421410 CGCCTCCGAAGTGCATACAC 61.421 60.000 0.00 0.00 41.35 2.90
2218 2713 1.153647 CGCCTCCGAAGTGCATACA 60.154 57.895 0.00 0.00 36.29 2.29
2219 2714 1.141019 TCGCCTCCGAAGTGCATAC 59.859 57.895 0.00 0.00 41.17 2.39
2220 2715 3.610976 TCGCCTCCGAAGTGCATA 58.389 55.556 0.00 0.00 41.17 3.14
2229 2724 0.813610 TGCCAATGTTATCGCCTCCG 60.814 55.000 0.00 0.00 0.00 4.63
2230 2725 1.267806 CATGCCAATGTTATCGCCTCC 59.732 52.381 0.00 0.00 0.00 4.30
2231 2726 2.221169 TCATGCCAATGTTATCGCCTC 58.779 47.619 0.00 0.00 35.15 4.70
2232 2727 2.224606 CTCATGCCAATGTTATCGCCT 58.775 47.619 0.00 0.00 35.15 5.52
2233 2728 1.949525 ACTCATGCCAATGTTATCGCC 59.050 47.619 0.00 0.00 35.15 5.54
2234 2729 4.511454 TCTTACTCATGCCAATGTTATCGC 59.489 41.667 0.00 0.00 35.15 4.58
2235 2730 5.523552 TGTCTTACTCATGCCAATGTTATCG 59.476 40.000 0.00 0.00 35.15 2.92
2236 2731 6.540189 AGTGTCTTACTCATGCCAATGTTATC 59.460 38.462 0.00 0.00 33.17 1.75
2237 2732 6.418101 AGTGTCTTACTCATGCCAATGTTAT 58.582 36.000 0.00 0.00 33.17 1.89
2238 2733 5.804639 AGTGTCTTACTCATGCCAATGTTA 58.195 37.500 0.00 0.00 33.17 2.41
2239 2734 4.655963 AGTGTCTTACTCATGCCAATGTT 58.344 39.130 0.00 0.00 33.17 2.71
2240 2735 4.292186 AGTGTCTTACTCATGCCAATGT 57.708 40.909 0.00 0.00 33.17 2.71
2241 2736 5.295292 CCTAAGTGTCTTACTCATGCCAATG 59.705 44.000 0.00 0.00 39.18 2.82
2242 2737 5.431765 CCTAAGTGTCTTACTCATGCCAAT 58.568 41.667 0.00 0.00 39.18 3.16
2243 2738 4.323485 CCCTAAGTGTCTTACTCATGCCAA 60.323 45.833 0.00 0.00 39.18 4.52
2244 2739 3.197766 CCCTAAGTGTCTTACTCATGCCA 59.802 47.826 0.00 0.00 39.18 4.92
2245 2740 3.432326 CCCCTAAGTGTCTTACTCATGCC 60.432 52.174 0.00 0.00 39.18 4.40
2246 2741 3.798202 CCCCTAAGTGTCTTACTCATGC 58.202 50.000 0.00 0.00 39.18 4.06
2247 2742 3.452627 AGCCCCTAAGTGTCTTACTCATG 59.547 47.826 0.00 0.00 39.18 3.07
2248 2743 3.452627 CAGCCCCTAAGTGTCTTACTCAT 59.547 47.826 0.00 0.00 39.18 2.90
2249 2744 2.832129 CAGCCCCTAAGTGTCTTACTCA 59.168 50.000 0.00 0.00 39.18 3.41
2250 2745 2.832733 ACAGCCCCTAAGTGTCTTACTC 59.167 50.000 0.00 0.00 39.18 2.59
2251 2746 2.903926 ACAGCCCCTAAGTGTCTTACT 58.096 47.619 0.00 0.00 42.89 2.24
2252 2747 3.597255 GAACAGCCCCTAAGTGTCTTAC 58.403 50.000 0.00 0.00 0.00 2.34
2253 2748 2.232941 CGAACAGCCCCTAAGTGTCTTA 59.767 50.000 0.00 0.00 0.00 2.10
2254 2749 1.002087 CGAACAGCCCCTAAGTGTCTT 59.998 52.381 0.00 0.00 0.00 3.01
2255 2750 0.608640 CGAACAGCCCCTAAGTGTCT 59.391 55.000 0.00 0.00 0.00 3.41
2256 2751 0.391263 CCGAACAGCCCCTAAGTGTC 60.391 60.000 0.00 0.00 0.00 3.67
2257 2752 1.677552 CCGAACAGCCCCTAAGTGT 59.322 57.895 0.00 0.00 0.00 3.55
2258 2753 1.745489 GCCGAACAGCCCCTAAGTG 60.745 63.158 0.00 0.00 0.00 3.16
2259 2754 2.669240 GCCGAACAGCCCCTAAGT 59.331 61.111 0.00 0.00 0.00 2.24
2260 2755 2.511600 CGCCGAACAGCCCCTAAG 60.512 66.667 0.00 0.00 0.00 2.18
2261 2756 4.090588 CCGCCGAACAGCCCCTAA 62.091 66.667 0.00 0.00 0.00 2.69
2287 2782 4.106197 GCAGATTCTTATATACCGCGGAG 58.894 47.826 35.90 18.21 0.00 4.63
2288 2783 3.508402 TGCAGATTCTTATATACCGCGGA 59.492 43.478 35.90 16.57 0.00 5.54
2289 2784 3.845178 TGCAGATTCTTATATACCGCGG 58.155 45.455 26.86 26.86 0.00 6.46
2290 2785 4.733850 TCTGCAGATTCTTATATACCGCG 58.266 43.478 13.74 0.00 0.00 6.46
2291 2786 5.715070 ACTCTGCAGATTCTTATATACCGC 58.285 41.667 18.63 0.00 0.00 5.68
2292 2787 7.251994 GGTACTCTGCAGATTCTTATATACCG 58.748 42.308 18.63 2.91 0.00 4.02
2293 2788 7.094291 ACGGTACTCTGCAGATTCTTATATACC 60.094 40.741 18.63 12.67 0.00 2.73
2294 2789 7.818642 ACGGTACTCTGCAGATTCTTATATAC 58.181 38.462 18.63 4.65 0.00 1.47
2295 2790 7.997773 ACGGTACTCTGCAGATTCTTATATA 57.002 36.000 18.63 0.00 0.00 0.86
2296 2791 6.902771 ACGGTACTCTGCAGATTCTTATAT 57.097 37.500 18.63 0.00 0.00 0.86
2297 2792 6.710597 AACGGTACTCTGCAGATTCTTATA 57.289 37.500 18.63 0.66 0.00 0.98
2298 2793 5.599999 AACGGTACTCTGCAGATTCTTAT 57.400 39.130 18.63 0.00 0.00 1.73
2299 2794 5.185249 AGAAACGGTACTCTGCAGATTCTTA 59.815 40.000 18.63 3.70 0.00 2.10
2300 2795 3.963428 AACGGTACTCTGCAGATTCTT 57.037 42.857 18.63 4.72 0.00 2.52
2301 2796 3.511934 AGAAACGGTACTCTGCAGATTCT 59.488 43.478 18.63 17.59 0.00 2.40
2302 2797 3.851098 AGAAACGGTACTCTGCAGATTC 58.149 45.455 18.63 15.58 0.00 2.52
2303 2798 3.511934 AGAGAAACGGTACTCTGCAGATT 59.488 43.478 18.63 14.83 41.19 2.40
2304 2799 3.093057 AGAGAAACGGTACTCTGCAGAT 58.907 45.455 18.63 10.18 41.19 2.90
2305 2800 2.488545 GAGAGAAACGGTACTCTGCAGA 59.511 50.000 17.19 17.19 42.51 4.26
2306 2801 2.729467 CGAGAGAAACGGTACTCTGCAG 60.729 54.545 17.99 7.63 42.51 4.41
2307 2802 1.199327 CGAGAGAAACGGTACTCTGCA 59.801 52.381 17.99 0.00 42.51 4.41
2308 2803 1.897641 CGAGAGAAACGGTACTCTGC 58.102 55.000 17.99 10.95 42.51 4.26
2309 2804 1.469308 AGCGAGAGAAACGGTACTCTG 59.531 52.381 17.99 12.68 42.51 3.35
2310 2805 1.738908 GAGCGAGAGAAACGGTACTCT 59.261 52.381 14.57 14.57 44.68 3.24
2311 2806 1.202166 GGAGCGAGAGAAACGGTACTC 60.202 57.143 0.00 7.02 41.38 2.59
2312 2807 0.810016 GGAGCGAGAGAAACGGTACT 59.190 55.000 0.00 0.00 41.38 2.73
2313 2808 0.524862 TGGAGCGAGAGAAACGGTAC 59.475 55.000 0.00 0.00 41.38 3.34
2314 2809 0.524862 GTGGAGCGAGAGAAACGGTA 59.475 55.000 0.00 0.00 41.38 4.02
2315 2810 1.289380 GTGGAGCGAGAGAAACGGT 59.711 57.895 0.00 0.00 43.87 4.83
2316 2811 1.009389 GTGTGGAGCGAGAGAAACGG 61.009 60.000 0.00 0.00 0.00 4.44
2317 2812 0.039074 AGTGTGGAGCGAGAGAAACG 60.039 55.000 0.00 0.00 0.00 3.60
2318 2813 2.156343 AAGTGTGGAGCGAGAGAAAC 57.844 50.000 0.00 0.00 0.00 2.78
2319 2814 2.910688 AAAGTGTGGAGCGAGAGAAA 57.089 45.000 0.00 0.00 0.00 2.52
2320 2815 2.910688 AAAAGTGTGGAGCGAGAGAA 57.089 45.000 0.00 0.00 0.00 2.87
2321 2816 2.910688 AAAAAGTGTGGAGCGAGAGA 57.089 45.000 0.00 0.00 0.00 3.10
2322 2817 4.058817 AGTTAAAAAGTGTGGAGCGAGAG 58.941 43.478 0.00 0.00 0.00 3.20
2323 2818 3.807622 CAGTTAAAAAGTGTGGAGCGAGA 59.192 43.478 0.00 0.00 0.00 4.04
2324 2819 3.058914 CCAGTTAAAAAGTGTGGAGCGAG 60.059 47.826 0.00 0.00 0.00 5.03
2325 2820 2.875933 CCAGTTAAAAAGTGTGGAGCGA 59.124 45.455 0.00 0.00 0.00 4.93
2326 2821 2.875933 TCCAGTTAAAAAGTGTGGAGCG 59.124 45.455 0.00 0.00 32.21 5.03
2327 2822 4.338400 AGTTCCAGTTAAAAAGTGTGGAGC 59.662 41.667 0.00 0.00 38.53 4.70
2328 2823 6.451064 AAGTTCCAGTTAAAAAGTGTGGAG 57.549 37.500 0.00 0.00 38.53 3.86
2329 2824 5.065474 CGAAGTTCCAGTTAAAAAGTGTGGA 59.935 40.000 0.00 0.00 35.45 4.02
2330 2825 5.163693 ACGAAGTTCCAGTTAAAAAGTGTGG 60.164 40.000 0.00 0.00 37.78 4.17
2331 2826 5.875930 ACGAAGTTCCAGTTAAAAAGTGTG 58.124 37.500 0.00 0.00 37.78 3.82
2349 2844 2.792599 CTCCCGGAGTCGACGAAG 59.207 66.667 10.46 5.09 39.00 3.79
2350 2845 3.437795 GCTCCCGGAGTCGACGAA 61.438 66.667 16.09 0.00 39.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.