Multiple sequence alignment - TraesCS7A01G527800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G527800 chr7A 100.000 3105 0 0 1 3105 708665699 708662595 0.000000e+00 5734
1 TraesCS7A01G527800 chr7D 88.355 2164 152 44 11 2134 615903935 615901832 0.000000e+00 2508
2 TraesCS7A01G527800 chr7D 86.667 135 9 4 11 136 615904171 615904037 1.160000e-29 141
3 TraesCS7A01G527800 chr7B 86.963 2071 142 53 11 2059 708952240 708950276 0.000000e+00 2211
4 TraesCS7A01G527800 chr7B 91.696 289 20 4 2818 3105 708919062 708918777 6.240000e-107 398
5 TraesCS7A01G527800 chr7B 90.234 256 20 3 2526 2780 708919315 708919064 2.310000e-86 329


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G527800 chr7A 708662595 708665699 3104 True 5734.0 5734 100.000 1 3105 1 chr7A.!!$R1 3104
1 TraesCS7A01G527800 chr7D 615901832 615904171 2339 True 1324.5 2508 87.511 11 2134 2 chr7D.!!$R1 2123
2 TraesCS7A01G527800 chr7B 708950276 708952240 1964 True 2211.0 2211 86.963 11 2059 1 chr7B.!!$R1 2048
3 TraesCS7A01G527800 chr7B 708918777 708919315 538 True 363.5 398 90.965 2526 3105 2 chr7B.!!$R2 579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 482 0.036765 TACTTCGCCGCTCCACAAAT 60.037 50.0 0.0 0.0 0.00 2.32 F
1354 1619 0.037605 CACTCCCCAAGGTACGTGTC 60.038 60.0 0.0 0.0 35.66 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1401 1668 0.031585 CCGACCGGCGAAGATAATCA 59.968 55.0 17.96 0.00 44.57 2.57 R
2811 3089 0.030504 CAAAGCATGAACGTGGTGCA 59.969 50.0 18.39 3.53 41.19 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 3.317993 ACTGGATTTGTTCTTCCAAACCG 59.682 43.478 0.00 0.00 41.36 4.44
117 354 9.383519 GTATCAGTATCAGATTTTGGAAAGACA 57.616 33.333 0.00 0.00 0.00 3.41
155 394 1.980772 GCAGCATCCACTTGGCCTT 60.981 57.895 3.32 0.00 34.44 4.35
184 423 9.875708 GATAGAGGGATATCTTGGTATATCAGT 57.124 37.037 2.05 0.00 39.59 3.41
202 441 1.276421 AGTGTAGGCAGCGACAATCTT 59.724 47.619 0.47 0.00 0.00 2.40
243 482 0.036765 TACTTCGCCGCTCCACAAAT 60.037 50.000 0.00 0.00 0.00 2.32
278 517 2.695666 CCCTGATCATACACTCGGAGTT 59.304 50.000 8.18 3.22 0.00 3.01
342 587 4.139859 TGTAAAGAGGAAACCGTGTGAA 57.860 40.909 0.00 0.00 0.00 3.18
347 592 1.880027 GAGGAAACCGTGTGAATTGCT 59.120 47.619 0.00 0.00 0.00 3.91
421 666 0.796312 TTCGTCAGCCATTCTTTCGC 59.204 50.000 0.00 0.00 0.00 4.70
424 673 1.003839 TCAGCCATTCTTTCGCCGT 60.004 52.632 0.00 0.00 0.00 5.68
451 700 7.140048 CGTACATAGGAACCTGTCTAGATTTC 58.860 42.308 3.36 0.00 0.00 2.17
454 703 6.897966 ACATAGGAACCTGTCTAGATTTCTCA 59.102 38.462 3.36 0.00 0.00 3.27
457 706 6.468543 AGGAACCTGTCTAGATTTCTCAAAC 58.531 40.000 0.00 0.00 0.00 2.93
460 709 6.380079 ACCTGTCTAGATTTCTCAAACCAT 57.620 37.500 0.00 0.00 0.00 3.55
461 710 6.410540 ACCTGTCTAGATTTCTCAAACCATC 58.589 40.000 0.00 0.00 0.00 3.51
475 724 6.098409 TCTCAAACCATCTCATACTAGGAACC 59.902 42.308 0.00 0.00 0.00 3.62
476 725 5.964477 TCAAACCATCTCATACTAGGAACCT 59.036 40.000 0.00 0.00 0.00 3.50
478 727 4.884961 ACCATCTCATACTAGGAACCTGT 58.115 43.478 3.36 2.97 0.00 4.00
479 728 4.896482 ACCATCTCATACTAGGAACCTGTC 59.104 45.833 3.36 0.00 0.00 3.51
480 729 5.144100 CCATCTCATACTAGGAACCTGTCT 58.856 45.833 3.36 0.00 0.00 3.41
481 730 6.126156 ACCATCTCATACTAGGAACCTGTCTA 60.126 42.308 3.36 0.00 0.00 2.59
483 732 6.826632 TCTCATACTAGGAACCTGTCTAGA 57.173 41.667 3.36 0.00 37.13 2.43
484 733 7.395525 TCTCATACTAGGAACCTGTCTAGAT 57.604 40.000 3.36 0.00 37.13 1.98
485 734 7.817440 TCTCATACTAGGAACCTGTCTAGATT 58.183 38.462 3.36 0.00 37.13 2.40
487 736 8.466617 TCATACTAGGAACCTGTCTAGATTTC 57.533 38.462 3.36 0.00 37.13 2.17
523 781 1.583495 TTCGTCGATGAGCGGTGAGT 61.583 55.000 7.51 0.00 41.33 3.41
555 813 2.489275 CGGCCTGCCTGTTGTTGTT 61.489 57.895 6.60 0.00 0.00 2.83
556 814 1.067916 GGCCTGCCTGTTGTTGTTG 59.932 57.895 0.00 0.00 0.00 3.33
557 815 1.675720 GGCCTGCCTGTTGTTGTTGT 61.676 55.000 0.00 0.00 0.00 3.32
566 824 2.455032 TGTTGTTGTTGTGCATTACGC 58.545 42.857 0.00 0.00 42.89 4.42
597 855 4.096681 TCTCCTTGTGATTAGGCTTCAGA 58.903 43.478 0.00 0.00 32.59 3.27
615 873 1.276138 AGAGTGGAACATCGATGCACA 59.724 47.619 26.18 19.68 44.52 4.57
645 903 3.009723 TCGATGCCATTGTTCTTCTTCC 58.990 45.455 0.00 0.00 0.00 3.46
678 936 5.356882 TTCGGTTTCATTGTTGAGCTTAG 57.643 39.130 0.00 0.00 32.27 2.18
700 958 5.376625 AGTTAGTTTTGGTTGAGCAGATGA 58.623 37.500 0.00 0.00 0.00 2.92
701 959 6.006449 AGTTAGTTTTGGTTGAGCAGATGAT 58.994 36.000 0.00 0.00 0.00 2.45
702 960 7.168219 AGTTAGTTTTGGTTGAGCAGATGATA 58.832 34.615 0.00 0.00 0.00 2.15
703 961 7.831193 AGTTAGTTTTGGTTGAGCAGATGATAT 59.169 33.333 0.00 0.00 0.00 1.63
704 962 6.446781 AGTTTTGGTTGAGCAGATGATATG 57.553 37.500 0.00 0.00 0.00 1.78
705 963 5.359009 AGTTTTGGTTGAGCAGATGATATGG 59.641 40.000 0.00 0.00 0.00 2.74
706 964 4.508551 TTGGTTGAGCAGATGATATGGT 57.491 40.909 0.00 0.00 0.00 3.55
707 965 4.508551 TGGTTGAGCAGATGATATGGTT 57.491 40.909 0.00 0.00 0.00 3.67
708 966 5.628797 TGGTTGAGCAGATGATATGGTTA 57.371 39.130 0.00 0.00 0.00 2.85
709 967 5.368145 TGGTTGAGCAGATGATATGGTTAC 58.632 41.667 0.00 0.00 0.00 2.50
710 968 4.757149 GGTTGAGCAGATGATATGGTTACC 59.243 45.833 8.14 8.14 0.00 2.85
711 969 5.368145 GTTGAGCAGATGATATGGTTACCA 58.632 41.667 6.53 6.53 38.19 3.25
712 970 5.830799 TGAGCAGATGATATGGTTACCAT 57.169 39.130 21.38 21.38 46.99 3.55
722 980 3.862877 ATGGTTACCATATGAGCTGCA 57.137 42.857 16.17 0.00 43.19 4.41
723 981 3.198409 TGGTTACCATATGAGCTGCAG 57.802 47.619 10.11 10.11 0.00 4.41
724 982 2.771372 TGGTTACCATATGAGCTGCAGA 59.229 45.455 20.43 0.00 0.00 4.26
725 983 3.392285 TGGTTACCATATGAGCTGCAGAT 59.608 43.478 20.43 12.64 0.00 2.90
726 984 3.750130 GGTTACCATATGAGCTGCAGATG 59.250 47.826 20.43 11.62 44.00 2.90
727 985 4.384056 GTTACCATATGAGCTGCAGATGT 58.616 43.478 20.43 6.76 43.11 3.06
728 986 5.511373 GGTTACCATATGAGCTGCAGATGTA 60.511 44.000 20.43 5.64 43.11 2.29
729 987 4.904895 ACCATATGAGCTGCAGATGTAT 57.095 40.909 20.43 10.69 43.11 2.29
730 988 7.323420 GTTACCATATGAGCTGCAGATGTATA 58.677 38.462 20.43 12.64 43.11 1.47
731 989 5.728471 ACCATATGAGCTGCAGATGTATAC 58.272 41.667 20.43 0.00 43.11 1.47
732 990 5.246883 ACCATATGAGCTGCAGATGTATACA 59.753 40.000 20.43 8.27 43.11 2.29
733 991 6.070366 ACCATATGAGCTGCAGATGTATACAT 60.070 38.462 20.43 18.31 43.11 2.29
748 1011 4.469586 TGTATACATTTCAGTGGAGGCTGA 59.530 41.667 0.08 0.00 43.03 4.26
766 1029 4.013050 GCTGAAGCCTCCTGTTAAATCTT 58.987 43.478 0.00 0.00 34.31 2.40
767 1030 4.460731 GCTGAAGCCTCCTGTTAAATCTTT 59.539 41.667 0.00 0.00 34.31 2.52
769 1032 6.151144 GCTGAAGCCTCCTGTTAAATCTTTAA 59.849 38.462 0.00 0.00 34.31 1.52
770 1033 7.309194 GCTGAAGCCTCCTGTTAAATCTTTAAA 60.309 37.037 0.00 0.00 33.19 1.52
772 1035 8.522830 TGAAGCCTCCTGTTAAATCTTTAAATG 58.477 33.333 0.00 0.00 34.71 2.32
816 1080 5.923204 ACCATATGAACTGAGGTCAAGATC 58.077 41.667 3.46 0.00 0.00 2.75
836 1100 0.658244 GTGACATGTTGCTGCACACG 60.658 55.000 0.00 0.00 0.00 4.49
845 1109 2.661537 CTGCACACGTCTCGGCAA 60.662 61.111 0.00 0.00 35.59 4.52
920 1184 0.599558 CTGGACAATGGGCAGTTGTG 59.400 55.000 10.83 0.00 39.72 3.33
926 1190 1.545136 CAATGGGCAGTTGTGTATGCA 59.455 47.619 0.00 0.00 44.37 3.96
927 1191 1.176527 ATGGGCAGTTGTGTATGCAC 58.823 50.000 7.03 7.03 46.24 4.57
937 1201 2.649331 GTGTATGCACGGACAGTACT 57.351 50.000 0.00 0.00 35.75 2.73
938 1202 3.770263 GTGTATGCACGGACAGTACTA 57.230 47.619 0.00 0.00 35.75 1.82
939 1203 3.432782 GTGTATGCACGGACAGTACTAC 58.567 50.000 0.00 0.00 35.75 2.73
940 1204 3.128242 GTGTATGCACGGACAGTACTACT 59.872 47.826 0.00 0.00 35.75 2.57
941 1205 4.964143 GTGTATGCACGGACAGTACTACTG 60.964 50.000 13.77 13.77 42.66 2.74
1042 1306 4.003788 CGGCGTGGTTCCTCTGGT 62.004 66.667 0.00 0.00 0.00 4.00
1101 1365 3.382832 CGCCTCCTCGTCCACCTT 61.383 66.667 0.00 0.00 0.00 3.50
1143 1407 2.521224 GACCTCCGCCGGTCCTAT 60.521 66.667 1.63 0.00 46.19 2.57
1239 1503 3.745803 AACCTCGTCCTCGTCGGC 61.746 66.667 0.00 0.00 38.33 5.54
1280 1544 0.809385 GAGGTCTCCGACACGATCAA 59.191 55.000 0.00 0.00 33.68 2.57
1350 1615 0.613853 TCTCCACTCCCCAAGGTACG 60.614 60.000 0.00 0.00 0.00 3.67
1351 1616 0.903454 CTCCACTCCCCAAGGTACGT 60.903 60.000 0.00 0.00 0.00 3.57
1352 1617 1.189524 TCCACTCCCCAAGGTACGTG 61.190 60.000 0.00 0.00 37.63 4.49
1353 1618 1.477685 CCACTCCCCAAGGTACGTGT 61.478 60.000 0.00 0.00 35.66 4.49
1354 1619 0.037605 CACTCCCCAAGGTACGTGTC 60.038 60.000 0.00 0.00 35.66 3.67
1355 1620 0.178941 ACTCCCCAAGGTACGTGTCT 60.179 55.000 0.00 0.00 35.66 3.41
1370 1635 2.542205 CGTGTCTACGTGGTTCACTCAA 60.542 50.000 19.75 0.00 44.99 3.02
1372 1637 2.035449 TGTCTACGTGGTTCACTCAAGG 59.965 50.000 0.00 0.00 31.34 3.61
1374 1639 2.295349 TCTACGTGGTTCACTCAAGGTC 59.705 50.000 0.00 0.00 31.34 3.85
1375 1640 0.828022 ACGTGGTTCACTCAAGGTCA 59.172 50.000 0.00 0.00 31.34 4.02
1377 1642 1.230324 GTGGTTCACTCAAGGTCAGC 58.770 55.000 0.00 0.00 0.00 4.26
1412 1679 2.670905 TGGCAACACGTGATTATCTTCG 59.329 45.455 25.01 0.00 46.17 3.79
1413 1680 2.536928 GGCAACACGTGATTATCTTCGC 60.537 50.000 25.01 8.04 0.00 4.70
1417 1694 0.458669 ACGTGATTATCTTCGCCGGT 59.541 50.000 1.90 0.00 0.00 5.28
1819 2096 2.890474 GTGGCGACGGCGATGATT 60.890 61.111 18.90 0.00 41.24 2.57
1821 2098 2.584970 GGCGACGGCGATGATTGA 60.585 61.111 18.90 0.00 41.24 2.57
1824 2101 2.576893 CGACGGCGATGATTGACGG 61.577 63.158 16.62 0.00 43.75 4.79
2075 2352 4.424566 CGTGCCATGCCAGCAACC 62.425 66.667 0.00 0.00 43.02 3.77
2115 2392 2.386249 GAGTGAGTGAAGTGACGTGAC 58.614 52.381 0.00 0.00 0.00 3.67
2122 2399 0.667792 GAAGTGACGTGACTCCTGGC 60.668 60.000 8.48 0.00 0.00 4.85
2141 2418 2.452116 CCCCCACTCTCACTTGTCA 58.548 57.895 0.00 0.00 0.00 3.58
2142 2419 0.035458 CCCCCACTCTCACTTGTCAC 59.965 60.000 0.00 0.00 0.00 3.67
2143 2420 1.051812 CCCCACTCTCACTTGTCACT 58.948 55.000 0.00 0.00 0.00 3.41
2144 2421 1.001406 CCCCACTCTCACTTGTCACTC 59.999 57.143 0.00 0.00 0.00 3.51
2145 2422 1.688735 CCCACTCTCACTTGTCACTCA 59.311 52.381 0.00 0.00 0.00 3.41
2146 2423 2.546795 CCCACTCTCACTTGTCACTCAC 60.547 54.545 0.00 0.00 0.00 3.51
2147 2424 2.389059 CACTCTCACTTGTCACTCACG 58.611 52.381 0.00 0.00 0.00 4.35
2148 2425 2.033424 CACTCTCACTTGTCACTCACGA 59.967 50.000 0.00 0.00 0.00 4.35
2149 2426 2.292016 ACTCTCACTTGTCACTCACGAG 59.708 50.000 0.00 0.00 41.93 4.18
2150 2427 1.609072 TCTCACTTGTCACTCACGAGG 59.391 52.381 0.00 0.00 40.60 4.63
2151 2428 1.609072 CTCACTTGTCACTCACGAGGA 59.391 52.381 0.00 0.00 40.60 3.71
2152 2429 1.337071 TCACTTGTCACTCACGAGGAC 59.663 52.381 0.00 4.27 40.60 3.85
2153 2430 1.338337 CACTTGTCACTCACGAGGACT 59.662 52.381 13.36 0.00 40.60 3.85
2154 2431 1.609555 ACTTGTCACTCACGAGGACTC 59.390 52.381 13.36 0.00 40.60 3.36
2174 2451 4.992688 CTCGATGGAGTGATAGGAATAGC 58.007 47.826 0.00 0.00 35.48 2.97
2175 2452 3.440522 TCGATGGAGTGATAGGAATAGCG 59.559 47.826 0.00 0.00 0.00 4.26
2176 2453 3.516615 GATGGAGTGATAGGAATAGCGC 58.483 50.000 0.00 0.00 0.00 5.92
2177 2454 2.316108 TGGAGTGATAGGAATAGCGCA 58.684 47.619 11.47 0.00 0.00 6.09
2178 2455 2.698274 TGGAGTGATAGGAATAGCGCAA 59.302 45.455 11.47 0.00 0.00 4.85
2179 2456 3.060602 GGAGTGATAGGAATAGCGCAAC 58.939 50.000 11.47 0.00 0.00 4.17
2180 2457 3.060602 GAGTGATAGGAATAGCGCAACC 58.939 50.000 11.47 7.14 0.00 3.77
2181 2458 1.792949 GTGATAGGAATAGCGCAACCG 59.207 52.381 11.47 0.00 37.57 4.44
2182 2459 1.411246 TGATAGGAATAGCGCAACCGT 59.589 47.619 11.47 0.00 36.67 4.83
2183 2460 2.159014 TGATAGGAATAGCGCAACCGTT 60.159 45.455 11.47 0.00 36.67 4.44
2184 2461 2.389962 TAGGAATAGCGCAACCGTTT 57.610 45.000 11.47 0.00 36.67 3.60
2185 2462 1.530323 AGGAATAGCGCAACCGTTTT 58.470 45.000 11.47 0.00 36.67 2.43
2186 2463 1.467342 AGGAATAGCGCAACCGTTTTC 59.533 47.619 11.47 0.00 36.67 2.29
2187 2464 1.198178 GGAATAGCGCAACCGTTTTCA 59.802 47.619 11.47 0.00 36.67 2.69
2188 2465 2.159435 GGAATAGCGCAACCGTTTTCAT 60.159 45.455 11.47 0.00 36.67 2.57
2189 2466 3.498082 GAATAGCGCAACCGTTTTCATT 58.502 40.909 11.47 0.00 36.67 2.57
2190 2467 3.569250 ATAGCGCAACCGTTTTCATTT 57.431 38.095 11.47 0.00 36.67 2.32
2191 2468 2.217429 AGCGCAACCGTTTTCATTTT 57.783 40.000 11.47 0.00 36.67 1.82
2192 2469 1.857837 AGCGCAACCGTTTTCATTTTG 59.142 42.857 11.47 0.00 36.67 2.44
2193 2470 1.855360 GCGCAACCGTTTTCATTTTGA 59.145 42.857 0.30 0.00 36.67 2.69
2194 2471 2.474735 GCGCAACCGTTTTCATTTTGAT 59.525 40.909 0.30 0.00 36.67 2.57
2195 2472 3.059935 GCGCAACCGTTTTCATTTTGATT 60.060 39.130 0.30 0.00 36.67 2.57
2196 2473 4.149046 GCGCAACCGTTTTCATTTTGATTA 59.851 37.500 0.30 0.00 36.67 1.75
2197 2474 5.332656 GCGCAACCGTTTTCATTTTGATTAA 60.333 36.000 0.30 0.00 36.67 1.40
2198 2475 6.288419 CGCAACCGTTTTCATTTTGATTAAG 58.712 36.000 0.00 0.00 0.00 1.85
2199 2476 6.070829 GCAACCGTTTTCATTTTGATTAAGC 58.929 36.000 0.00 0.00 0.00 3.09
2200 2477 6.589454 CAACCGTTTTCATTTTGATTAAGCC 58.411 36.000 0.00 0.00 0.00 4.35
2201 2478 5.848406 ACCGTTTTCATTTTGATTAAGCCA 58.152 33.333 0.00 0.00 0.00 4.75
2202 2479 6.463360 ACCGTTTTCATTTTGATTAAGCCAT 58.537 32.000 0.00 0.00 0.00 4.40
2203 2480 7.607250 ACCGTTTTCATTTTGATTAAGCCATA 58.393 30.769 0.00 0.00 0.00 2.74
2204 2481 8.091449 ACCGTTTTCATTTTGATTAAGCCATAA 58.909 29.630 0.00 0.00 0.00 1.90
2205 2482 8.930760 CCGTTTTCATTTTGATTAAGCCATAAA 58.069 29.630 0.00 0.00 0.00 1.40
2215 2492 8.810652 TTGATTAAGCCATAAAAATATTCGGC 57.189 30.769 0.00 0.00 39.90 5.54
2221 2498 4.681483 GCCATAAAAATATTCGGCTGAAGC 59.319 41.667 14.43 3.71 37.57 3.86
2222 2499 5.735922 GCCATAAAAATATTCGGCTGAAGCA 60.736 40.000 14.43 4.48 44.36 3.91
2223 2500 6.272318 CCATAAAAATATTCGGCTGAAGCAA 58.728 36.000 14.43 2.24 44.36 3.91
2224 2501 6.198966 CCATAAAAATATTCGGCTGAAGCAAC 59.801 38.462 14.43 0.00 44.36 4.17
2225 2502 3.782889 AAATATTCGGCTGAAGCAACC 57.217 42.857 14.43 0.00 44.36 3.77
2226 2503 2.717639 ATATTCGGCTGAAGCAACCT 57.282 45.000 14.43 0.00 44.36 3.50
2227 2504 2.489938 TATTCGGCTGAAGCAACCTT 57.510 45.000 14.43 0.00 44.36 3.50
2228 2505 0.883833 ATTCGGCTGAAGCAACCTTG 59.116 50.000 14.43 0.00 44.36 3.61
2229 2506 0.465460 TTCGGCTGAAGCAACCTTGT 60.465 50.000 3.13 0.00 44.36 3.16
2230 2507 0.394938 TCGGCTGAAGCAACCTTGTA 59.605 50.000 4.43 0.00 44.36 2.41
2231 2508 1.003118 TCGGCTGAAGCAACCTTGTAT 59.997 47.619 4.43 0.00 44.36 2.29
2232 2509 1.131126 CGGCTGAAGCAACCTTGTATG 59.869 52.381 4.43 0.00 44.36 2.39
2233 2510 1.135286 GGCTGAAGCAACCTTGTATGC 60.135 52.381 4.43 0.00 44.36 3.14
2234 2511 1.466360 GCTGAAGCAACCTTGTATGCG 60.466 52.381 0.00 0.00 46.98 4.73
2235 2512 1.131126 CTGAAGCAACCTTGTATGCGG 59.869 52.381 0.00 0.00 46.98 5.69
2236 2513 0.179163 GAAGCAACCTTGTATGCGGC 60.179 55.000 0.00 0.00 46.98 6.53
2237 2514 0.609131 AAGCAACCTTGTATGCGGCT 60.609 50.000 0.00 0.00 46.98 5.52
2238 2515 1.026718 AGCAACCTTGTATGCGGCTC 61.027 55.000 0.00 0.00 46.98 4.70
2239 2516 1.026718 GCAACCTTGTATGCGGCTCT 61.027 55.000 0.00 0.00 32.17 4.09
2240 2517 1.453155 CAACCTTGTATGCGGCTCTT 58.547 50.000 0.00 0.00 0.00 2.85
2241 2518 2.627945 CAACCTTGTATGCGGCTCTTA 58.372 47.619 0.00 0.00 0.00 2.10
2242 2519 3.006940 CAACCTTGTATGCGGCTCTTAA 58.993 45.455 0.00 0.00 0.00 1.85
2243 2520 3.560636 ACCTTGTATGCGGCTCTTAAT 57.439 42.857 0.00 0.00 0.00 1.40
2244 2521 4.682778 ACCTTGTATGCGGCTCTTAATA 57.317 40.909 0.00 0.00 0.00 0.98
2245 2522 5.031066 ACCTTGTATGCGGCTCTTAATAA 57.969 39.130 0.00 0.00 0.00 1.40
2246 2523 5.433526 ACCTTGTATGCGGCTCTTAATAAA 58.566 37.500 0.00 0.00 0.00 1.40
2247 2524 5.883673 ACCTTGTATGCGGCTCTTAATAAAA 59.116 36.000 0.00 0.00 0.00 1.52
2248 2525 6.376018 ACCTTGTATGCGGCTCTTAATAAAAA 59.624 34.615 0.00 0.00 0.00 1.94
2249 2526 6.912591 CCTTGTATGCGGCTCTTAATAAAAAG 59.087 38.462 0.00 0.00 0.00 2.27
2250 2527 6.995511 TGTATGCGGCTCTTAATAAAAAGT 57.004 33.333 0.00 0.00 0.00 2.66
2251 2528 7.385778 TGTATGCGGCTCTTAATAAAAAGTT 57.614 32.000 0.00 0.00 0.00 2.66
2252 2529 7.247728 TGTATGCGGCTCTTAATAAAAAGTTG 58.752 34.615 0.00 0.00 0.00 3.16
2253 2530 4.481463 TGCGGCTCTTAATAAAAAGTTGC 58.519 39.130 0.00 0.00 0.00 4.17
2254 2531 4.217550 TGCGGCTCTTAATAAAAAGTTGCT 59.782 37.500 0.00 0.00 32.19 3.91
2255 2532 5.413213 TGCGGCTCTTAATAAAAAGTTGCTA 59.587 36.000 0.00 0.00 32.19 3.49
2256 2533 6.072397 TGCGGCTCTTAATAAAAAGTTGCTAA 60.072 34.615 0.00 0.00 32.19 3.09
2257 2534 6.804783 GCGGCTCTTAATAAAAAGTTGCTAAA 59.195 34.615 0.00 0.00 32.19 1.85
2258 2535 7.327518 GCGGCTCTTAATAAAAAGTTGCTAAAA 59.672 33.333 0.00 0.00 32.19 1.52
2259 2536 9.353999 CGGCTCTTAATAAAAAGTTGCTAAAAT 57.646 29.630 0.00 0.00 32.19 1.82
2268 2545 9.762933 ATAAAAAGTTGCTAAAATGACATGTGT 57.237 25.926 1.15 0.00 0.00 3.72
2270 2547 8.574196 AAAAGTTGCTAAAATGACATGTGTAC 57.426 30.769 1.15 0.00 0.00 2.90
2271 2548 6.254281 AGTTGCTAAAATGACATGTGTACC 57.746 37.500 1.15 0.00 0.00 3.34
2272 2549 4.937696 TGCTAAAATGACATGTGTACCG 57.062 40.909 1.15 0.00 0.00 4.02
2273 2550 4.320023 TGCTAAAATGACATGTGTACCGT 58.680 39.130 1.15 0.00 0.00 4.83
2274 2551 4.390603 TGCTAAAATGACATGTGTACCGTC 59.609 41.667 1.15 0.00 0.00 4.79
2275 2552 4.491924 GCTAAAATGACATGTGTACCGTCG 60.492 45.833 1.15 0.00 32.17 5.12
2276 2553 3.306917 AAATGACATGTGTACCGTCGA 57.693 42.857 1.15 0.00 32.17 4.20
2277 2554 2.273370 ATGACATGTGTACCGTCGAC 57.727 50.000 1.15 5.18 32.17 4.20
2278 2555 1.241165 TGACATGTGTACCGTCGACT 58.759 50.000 14.70 0.00 32.17 4.18
2279 2556 2.425539 TGACATGTGTACCGTCGACTA 58.574 47.619 14.70 0.00 32.17 2.59
2280 2557 2.813172 TGACATGTGTACCGTCGACTAA 59.187 45.455 14.70 0.00 32.17 2.24
2281 2558 3.441222 TGACATGTGTACCGTCGACTAAT 59.559 43.478 14.70 1.02 32.17 1.73
2282 2559 3.766151 ACATGTGTACCGTCGACTAATG 58.234 45.455 14.70 8.73 0.00 1.90
2283 2560 3.441222 ACATGTGTACCGTCGACTAATGA 59.559 43.478 14.70 0.00 0.00 2.57
2284 2561 4.082625 ACATGTGTACCGTCGACTAATGAA 60.083 41.667 14.70 0.00 0.00 2.57
2285 2562 4.502171 TGTGTACCGTCGACTAATGAAA 57.498 40.909 14.70 0.00 0.00 2.69
2286 2563 4.229096 TGTGTACCGTCGACTAATGAAAC 58.771 43.478 14.70 4.12 0.00 2.78
2287 2564 4.022935 TGTGTACCGTCGACTAATGAAACT 60.023 41.667 14.70 0.00 0.00 2.66
2288 2565 5.181056 TGTGTACCGTCGACTAATGAAACTA 59.819 40.000 14.70 0.00 0.00 2.24
2289 2566 6.086222 GTGTACCGTCGACTAATGAAACTAA 58.914 40.000 14.70 0.00 0.00 2.24
2290 2567 6.582295 GTGTACCGTCGACTAATGAAACTAAA 59.418 38.462 14.70 0.00 0.00 1.85
2291 2568 6.582295 TGTACCGTCGACTAATGAAACTAAAC 59.418 38.462 14.70 0.00 0.00 2.01
2292 2569 4.618489 ACCGTCGACTAATGAAACTAAACG 59.382 41.667 14.70 0.00 0.00 3.60
2293 2570 4.853196 CCGTCGACTAATGAAACTAAACGA 59.147 41.667 14.70 0.00 0.00 3.85
2294 2571 5.003214 CCGTCGACTAATGAAACTAAACGAG 59.997 44.000 14.70 0.00 0.00 4.18
2295 2572 5.003214 CGTCGACTAATGAAACTAAACGAGG 59.997 44.000 14.70 0.00 0.00 4.63
2296 2573 4.860907 TCGACTAATGAAACTAAACGAGGC 59.139 41.667 0.00 0.00 0.00 4.70
2297 2574 4.032558 CGACTAATGAAACTAAACGAGGCC 59.967 45.833 0.00 0.00 0.00 5.19
2298 2575 5.161943 ACTAATGAAACTAAACGAGGCCT 57.838 39.130 3.86 3.86 0.00 5.19
2299 2576 5.557866 ACTAATGAAACTAAACGAGGCCTT 58.442 37.500 6.77 0.00 0.00 4.35
2300 2577 5.642491 ACTAATGAAACTAAACGAGGCCTTC 59.358 40.000 6.77 0.00 0.00 3.46
2301 2578 3.478857 TGAAACTAAACGAGGCCTTCA 57.521 42.857 6.77 0.00 0.00 3.02
2302 2579 4.015872 TGAAACTAAACGAGGCCTTCAT 57.984 40.909 6.77 0.00 0.00 2.57
2303 2580 4.394729 TGAAACTAAACGAGGCCTTCATT 58.605 39.130 6.77 4.80 0.00 2.57
2304 2581 4.215399 TGAAACTAAACGAGGCCTTCATTG 59.785 41.667 6.77 0.00 0.00 2.82
2305 2582 2.711542 ACTAAACGAGGCCTTCATTGG 58.288 47.619 6.77 6.94 0.00 3.16
2306 2583 2.304761 ACTAAACGAGGCCTTCATTGGA 59.695 45.455 6.77 0.00 0.00 3.53
2307 2584 2.514458 AAACGAGGCCTTCATTGGAT 57.486 45.000 6.77 0.00 0.00 3.41
2308 2585 2.514458 AACGAGGCCTTCATTGGATT 57.486 45.000 6.77 0.00 0.00 3.01
2309 2586 2.514458 ACGAGGCCTTCATTGGATTT 57.486 45.000 6.77 0.00 0.00 2.17
2310 2587 2.369394 ACGAGGCCTTCATTGGATTTC 58.631 47.619 6.77 0.00 0.00 2.17
2311 2588 2.290896 ACGAGGCCTTCATTGGATTTCA 60.291 45.455 6.77 0.00 0.00 2.69
2312 2589 2.954318 CGAGGCCTTCATTGGATTTCAT 59.046 45.455 6.77 0.00 0.00 2.57
2313 2590 3.382546 CGAGGCCTTCATTGGATTTCATT 59.617 43.478 6.77 0.00 0.00 2.57
2314 2591 4.142093 CGAGGCCTTCATTGGATTTCATTT 60.142 41.667 6.77 0.00 0.00 2.32
2315 2592 5.349061 AGGCCTTCATTGGATTTCATTTC 57.651 39.130 0.00 0.00 0.00 2.17
2316 2593 4.162888 AGGCCTTCATTGGATTTCATTTCC 59.837 41.667 0.00 0.00 0.00 3.13
2317 2594 4.162888 GGCCTTCATTGGATTTCATTTCCT 59.837 41.667 0.00 0.00 34.17 3.36
2318 2595 5.338626 GGCCTTCATTGGATTTCATTTCCTT 60.339 40.000 0.00 0.00 34.17 3.36
2319 2596 6.127083 GGCCTTCATTGGATTTCATTTCCTTA 60.127 38.462 0.00 0.00 34.17 2.69
2320 2597 6.758416 GCCTTCATTGGATTTCATTTCCTTAC 59.242 38.462 0.00 0.00 34.17 2.34
2321 2598 7.364144 GCCTTCATTGGATTTCATTTCCTTACT 60.364 37.037 0.00 0.00 34.17 2.24
2322 2599 8.534496 CCTTCATTGGATTTCATTTCCTTACTT 58.466 33.333 0.00 0.00 34.17 2.24
2323 2600 9.578439 CTTCATTGGATTTCATTTCCTTACTTC 57.422 33.333 0.00 0.00 34.17 3.01
2324 2601 8.066612 TCATTGGATTTCATTTCCTTACTTCC 57.933 34.615 0.00 0.00 34.17 3.46
2325 2602 6.850752 TTGGATTTCATTTCCTTACTTCCC 57.149 37.500 0.00 0.00 34.17 3.97
2326 2603 5.898120 TGGATTTCATTTCCTTACTTCCCA 58.102 37.500 0.00 0.00 34.17 4.37
2327 2604 6.318913 TGGATTTCATTTCCTTACTTCCCAA 58.681 36.000 0.00 0.00 34.17 4.12
2328 2605 6.437162 TGGATTTCATTTCCTTACTTCCCAAG 59.563 38.462 0.00 0.00 34.17 3.61
2329 2606 6.663523 GGATTTCATTTCCTTACTTCCCAAGA 59.336 38.462 0.00 0.00 0.00 3.02
2330 2607 7.178451 GGATTTCATTTCCTTACTTCCCAAGAA 59.822 37.037 0.00 0.00 0.00 2.52
2331 2608 7.906199 TTTCATTTCCTTACTTCCCAAGAAA 57.094 32.000 0.00 0.00 0.00 2.52
2332 2609 7.906199 TTCATTTCCTTACTTCCCAAGAAAA 57.094 32.000 0.00 0.00 0.00 2.29
2333 2610 7.284919 TCATTTCCTTACTTCCCAAGAAAAC 57.715 36.000 0.00 0.00 0.00 2.43
2334 2611 6.836527 TCATTTCCTTACTTCCCAAGAAAACA 59.163 34.615 0.00 0.00 0.00 2.83
2335 2612 6.459670 TTTCCTTACTTCCCAAGAAAACAC 57.540 37.500 0.00 0.00 0.00 3.32
2336 2613 5.118729 TCCTTACTTCCCAAGAAAACACA 57.881 39.130 0.00 0.00 0.00 3.72
2337 2614 4.885325 TCCTTACTTCCCAAGAAAACACAC 59.115 41.667 0.00 0.00 0.00 3.82
2338 2615 4.261031 CCTTACTTCCCAAGAAAACACACG 60.261 45.833 0.00 0.00 0.00 4.49
2339 2616 2.718563 ACTTCCCAAGAAAACACACGT 58.281 42.857 0.00 0.00 0.00 4.49
2340 2617 2.681344 ACTTCCCAAGAAAACACACGTC 59.319 45.455 0.00 0.00 0.00 4.34
2341 2618 1.292061 TCCCAAGAAAACACACGTCG 58.708 50.000 0.00 0.00 0.00 5.12
2342 2619 0.316689 CCCAAGAAAACACACGTCGC 60.317 55.000 0.00 0.00 0.00 5.19
2343 2620 0.375454 CCAAGAAAACACACGTCGCA 59.625 50.000 0.00 0.00 0.00 5.10
2344 2621 1.452717 CAAGAAAACACACGTCGCAC 58.547 50.000 0.00 0.00 0.00 5.34
2345 2622 0.375803 AAGAAAACACACGTCGCACC 59.624 50.000 0.00 0.00 0.00 5.01
2346 2623 0.741574 AGAAAACACACGTCGCACCA 60.742 50.000 0.00 0.00 0.00 4.17
2347 2624 0.097325 GAAAACACACGTCGCACCAA 59.903 50.000 0.00 0.00 0.00 3.67
2348 2625 0.736053 AAAACACACGTCGCACCAAT 59.264 45.000 0.00 0.00 0.00 3.16
2349 2626 1.584175 AAACACACGTCGCACCAATA 58.416 45.000 0.00 0.00 0.00 1.90
2350 2627 1.803334 AACACACGTCGCACCAATAT 58.197 45.000 0.00 0.00 0.00 1.28
2351 2628 1.803334 ACACACGTCGCACCAATATT 58.197 45.000 0.00 0.00 0.00 1.28
2352 2629 2.962125 ACACACGTCGCACCAATATTA 58.038 42.857 0.00 0.00 0.00 0.98
2353 2630 3.527533 ACACACGTCGCACCAATATTAT 58.472 40.909 0.00 0.00 0.00 1.28
2354 2631 3.936453 ACACACGTCGCACCAATATTATT 59.064 39.130 0.00 0.00 0.00 1.40
2355 2632 5.110598 ACACACGTCGCACCAATATTATTA 58.889 37.500 0.00 0.00 0.00 0.98
2356 2633 5.005971 ACACACGTCGCACCAATATTATTAC 59.994 40.000 0.00 0.00 0.00 1.89
2357 2634 4.508861 ACACGTCGCACCAATATTATTACC 59.491 41.667 0.00 0.00 0.00 2.85
2358 2635 4.508492 CACGTCGCACCAATATTATTACCA 59.492 41.667 0.00 0.00 0.00 3.25
2359 2636 5.006844 CACGTCGCACCAATATTATTACCAA 59.993 40.000 0.00 0.00 0.00 3.67
2360 2637 5.585445 ACGTCGCACCAATATTATTACCAAA 59.415 36.000 0.00 0.00 0.00 3.28
2361 2638 6.093771 ACGTCGCACCAATATTATTACCAAAA 59.906 34.615 0.00 0.00 0.00 2.44
2362 2639 6.412653 CGTCGCACCAATATTATTACCAAAAC 59.587 38.462 0.00 0.00 0.00 2.43
2363 2640 6.693978 GTCGCACCAATATTATTACCAAAACC 59.306 38.462 0.00 0.00 0.00 3.27
2364 2641 6.603997 TCGCACCAATATTATTACCAAAACCT 59.396 34.615 0.00 0.00 0.00 3.50
2365 2642 6.915843 CGCACCAATATTATTACCAAAACCTC 59.084 38.462 0.00 0.00 0.00 3.85
2366 2643 7.415765 CGCACCAATATTATTACCAAAACCTCA 60.416 37.037 0.00 0.00 0.00 3.86
2367 2644 8.254508 GCACCAATATTATTACCAAAACCTCAA 58.745 33.333 0.00 0.00 0.00 3.02
2368 2645 9.581099 CACCAATATTATTACCAAAACCTCAAC 57.419 33.333 0.00 0.00 0.00 3.18
2369 2646 9.541884 ACCAATATTATTACCAAAACCTCAACT 57.458 29.630 0.00 0.00 0.00 3.16
2400 2677 7.987750 AGAAAAATTCTTGTCTTCCTCTACC 57.012 36.000 0.00 0.00 36.36 3.18
2401 2678 6.943146 AGAAAAATTCTTGTCTTCCTCTACCC 59.057 38.462 0.00 0.00 36.36 3.69
2402 2679 5.843019 AAATTCTTGTCTTCCTCTACCCA 57.157 39.130 0.00 0.00 0.00 4.51
2403 2680 6.394345 AAATTCTTGTCTTCCTCTACCCAT 57.606 37.500 0.00 0.00 0.00 4.00
2404 2681 4.826274 TTCTTGTCTTCCTCTACCCATG 57.174 45.455 0.00 0.00 0.00 3.66
2405 2682 2.501723 TCTTGTCTTCCTCTACCCATGC 59.498 50.000 0.00 0.00 0.00 4.06
2406 2683 1.204146 TGTCTTCCTCTACCCATGCC 58.796 55.000 0.00 0.00 0.00 4.40
2407 2684 0.470341 GTCTTCCTCTACCCATGCCC 59.530 60.000 0.00 0.00 0.00 5.36
2408 2685 1.048724 TCTTCCTCTACCCATGCCCG 61.049 60.000 0.00 0.00 0.00 6.13
2409 2686 1.002403 TTCCTCTACCCATGCCCGA 59.998 57.895 0.00 0.00 0.00 5.14
2410 2687 0.619255 TTCCTCTACCCATGCCCGAA 60.619 55.000 0.00 0.00 0.00 4.30
2411 2688 0.399949 TCCTCTACCCATGCCCGAAT 60.400 55.000 0.00 0.00 0.00 3.34
2412 2689 0.035458 CCTCTACCCATGCCCGAATC 59.965 60.000 0.00 0.00 0.00 2.52
2413 2690 0.758734 CTCTACCCATGCCCGAATCA 59.241 55.000 0.00 0.00 0.00 2.57
2414 2691 1.140852 CTCTACCCATGCCCGAATCAA 59.859 52.381 0.00 0.00 0.00 2.57
2415 2692 1.562008 TCTACCCATGCCCGAATCAAA 59.438 47.619 0.00 0.00 0.00 2.69
2416 2693 2.174639 TCTACCCATGCCCGAATCAAAT 59.825 45.455 0.00 0.00 0.00 2.32
2417 2694 1.864669 ACCCATGCCCGAATCAAATT 58.135 45.000 0.00 0.00 0.00 1.82
2418 2695 3.025322 ACCCATGCCCGAATCAAATTA 57.975 42.857 0.00 0.00 0.00 1.40
2419 2696 3.370104 ACCCATGCCCGAATCAAATTAA 58.630 40.909 0.00 0.00 0.00 1.40
2420 2697 3.772025 ACCCATGCCCGAATCAAATTAAA 59.228 39.130 0.00 0.00 0.00 1.52
2421 2698 4.408596 ACCCATGCCCGAATCAAATTAAAT 59.591 37.500 0.00 0.00 0.00 1.40
2422 2699 4.990426 CCCATGCCCGAATCAAATTAAATC 59.010 41.667 0.00 0.00 0.00 2.17
2423 2700 5.221501 CCCATGCCCGAATCAAATTAAATCT 60.222 40.000 0.00 0.00 0.00 2.40
2424 2701 6.282930 CCATGCCCGAATCAAATTAAATCTT 58.717 36.000 0.00 0.00 0.00 2.40
2425 2702 7.432869 CCATGCCCGAATCAAATTAAATCTTA 58.567 34.615 0.00 0.00 0.00 2.10
2426 2703 7.382218 CCATGCCCGAATCAAATTAAATCTTAC 59.618 37.037 0.00 0.00 0.00 2.34
2427 2704 6.801575 TGCCCGAATCAAATTAAATCTTACC 58.198 36.000 0.00 0.00 0.00 2.85
2428 2705 6.378564 TGCCCGAATCAAATTAAATCTTACCA 59.621 34.615 0.00 0.00 0.00 3.25
2429 2706 7.093727 TGCCCGAATCAAATTAAATCTTACCAA 60.094 33.333 0.00 0.00 0.00 3.67
2430 2707 7.762159 GCCCGAATCAAATTAAATCTTACCAAA 59.238 33.333 0.00 0.00 0.00 3.28
2431 2708 9.646427 CCCGAATCAAATTAAATCTTACCAAAA 57.354 29.630 0.00 0.00 0.00 2.44
2447 2724 8.748412 TCTTACCAAAAATCTGAAATATGGTGG 58.252 33.333 14.83 9.70 39.82 4.61
2448 2725 6.298441 ACCAAAAATCTGAAATATGGTGGG 57.702 37.500 7.48 0.00 38.22 4.61
2449 2726 5.784906 ACCAAAAATCTGAAATATGGTGGGT 59.215 36.000 7.48 0.00 38.22 4.51
2450 2727 6.108015 CCAAAAATCTGAAATATGGTGGGTG 58.892 40.000 0.00 0.00 0.00 4.61
2451 2728 5.343307 AAAATCTGAAATATGGTGGGTGC 57.657 39.130 0.00 0.00 0.00 5.01
2452 2729 3.668141 ATCTGAAATATGGTGGGTGCA 57.332 42.857 0.00 0.00 0.00 4.57
2453 2730 3.448093 TCTGAAATATGGTGGGTGCAA 57.552 42.857 0.00 0.00 0.00 4.08
2454 2731 3.355378 TCTGAAATATGGTGGGTGCAAG 58.645 45.455 0.00 0.00 0.00 4.01
2455 2732 3.010027 TCTGAAATATGGTGGGTGCAAGA 59.990 43.478 0.00 0.00 0.00 3.02
2456 2733 3.956199 CTGAAATATGGTGGGTGCAAGAT 59.044 43.478 0.00 0.00 0.00 2.40
2457 2734 4.352009 TGAAATATGGTGGGTGCAAGATT 58.648 39.130 0.00 0.00 0.00 2.40
2458 2735 4.776837 TGAAATATGGTGGGTGCAAGATTT 59.223 37.500 0.00 0.00 0.00 2.17
2459 2736 5.954752 TGAAATATGGTGGGTGCAAGATTTA 59.045 36.000 0.00 0.00 0.00 1.40
2460 2737 6.610830 TGAAATATGGTGGGTGCAAGATTTAT 59.389 34.615 0.00 0.00 0.00 1.40
2461 2738 6.409524 AATATGGTGGGTGCAAGATTTATG 57.590 37.500 0.00 0.00 0.00 1.90
2462 2739 3.168035 TGGTGGGTGCAAGATTTATGT 57.832 42.857 0.00 0.00 0.00 2.29
2463 2740 3.088532 TGGTGGGTGCAAGATTTATGTC 58.911 45.455 0.00 0.00 0.00 3.06
2464 2741 3.088532 GGTGGGTGCAAGATTTATGTCA 58.911 45.455 0.00 0.00 0.00 3.58
2465 2742 3.119495 GGTGGGTGCAAGATTTATGTCAC 60.119 47.826 0.00 0.00 0.00 3.67
2466 2743 3.505680 GTGGGTGCAAGATTTATGTCACA 59.494 43.478 0.00 0.00 31.12 3.58
2467 2744 3.505680 TGGGTGCAAGATTTATGTCACAC 59.494 43.478 0.00 0.00 32.50 3.82
2468 2745 3.505680 GGGTGCAAGATTTATGTCACACA 59.494 43.478 0.00 0.00 32.30 3.72
2469 2746 4.475944 GGTGCAAGATTTATGTCACACAC 58.524 43.478 0.00 0.00 31.12 3.82
2470 2747 4.151070 GTGCAAGATTTATGTCACACACG 58.849 43.478 0.00 0.00 0.00 4.49
2471 2748 4.061596 TGCAAGATTTATGTCACACACGA 58.938 39.130 0.00 0.00 0.00 4.35
2472 2749 4.694982 TGCAAGATTTATGTCACACACGAT 59.305 37.500 0.00 0.00 0.00 3.73
2473 2750 5.181056 TGCAAGATTTATGTCACACACGATT 59.819 36.000 0.00 0.00 0.00 3.34
2474 2751 5.509272 GCAAGATTTATGTCACACACGATTG 59.491 40.000 0.00 0.00 0.00 2.67
2475 2752 5.801350 AGATTTATGTCACACACGATTGG 57.199 39.130 0.00 0.00 0.00 3.16
2476 2753 5.245531 AGATTTATGTCACACACGATTGGT 58.754 37.500 0.00 0.00 0.00 3.67
2500 2777 8.614994 GTGTTGAACCAGTAAAATATGTATGC 57.385 34.615 0.00 0.00 0.00 3.14
2501 2778 7.700656 GTGTTGAACCAGTAAAATATGTATGCC 59.299 37.037 0.00 0.00 0.00 4.40
2502 2779 6.952773 TGAACCAGTAAAATATGTATGCCC 57.047 37.500 0.00 0.00 0.00 5.36
2503 2780 5.830991 TGAACCAGTAAAATATGTATGCCCC 59.169 40.000 0.00 0.00 0.00 5.80
2504 2781 4.736473 ACCAGTAAAATATGTATGCCCCC 58.264 43.478 0.00 0.00 0.00 5.40
2520 2797 4.764336 CCCGCTGCAATGCACGTG 62.764 66.667 21.52 12.28 33.79 4.49
2544 2821 6.318396 TGCAATTAGCTAGTGATTGTAATGCA 59.682 34.615 14.94 10.01 45.94 3.96
2560 2837 7.320443 TGTAATGCATGAGTTATTGAGGAAC 57.680 36.000 0.00 0.00 0.00 3.62
2562 2839 5.824904 ATGCATGAGTTATTGAGGAACAC 57.175 39.130 0.00 0.00 0.00 3.32
2565 2842 4.436050 GCATGAGTTATTGAGGAACACACG 60.436 45.833 0.00 0.00 31.58 4.49
2572 2849 1.410004 TGAGGAACACACGAAGGACT 58.590 50.000 0.00 0.00 0.00 3.85
2573 2850 1.068588 TGAGGAACACACGAAGGACTG 59.931 52.381 0.00 0.00 0.00 3.51
2574 2851 0.393077 AGGAACACACGAAGGACTGG 59.607 55.000 0.00 0.00 0.00 4.00
2633 2910 4.206375 TGAAACAACGGCATCCATGATAT 58.794 39.130 0.00 0.00 0.00 1.63
2634 2911 5.372373 TGAAACAACGGCATCCATGATATA 58.628 37.500 0.00 0.00 0.00 0.86
2635 2912 6.003326 TGAAACAACGGCATCCATGATATAT 58.997 36.000 0.00 0.00 0.00 0.86
2683 2961 8.788813 GCAAAATAACAACGAATTGAGATAGTG 58.211 33.333 0.00 0.00 39.30 2.74
2689 2967 4.456280 ACGAATTGAGATAGTGCACTGA 57.544 40.909 29.57 13.48 0.00 3.41
2695 2973 2.164422 TGAGATAGTGCACTGACCTTCG 59.836 50.000 29.57 0.00 0.00 3.79
2697 2975 2.164624 AGATAGTGCACTGACCTTCGAC 59.835 50.000 29.57 9.21 0.00 4.20
2730 3008 7.648039 TTTGTACTTGGTTGTTTCACCTAAT 57.352 32.000 0.00 0.00 37.75 1.73
2738 3016 5.582665 TGGTTGTTTCACCTAATTGCAAAAC 59.417 36.000 1.71 0.95 37.75 2.43
2742 3020 7.301068 TGTTTCACCTAATTGCAAAACAAAG 57.699 32.000 1.71 0.00 42.86 2.77
2743 3021 5.982465 TTCACCTAATTGCAAAACAAAGC 57.018 34.783 1.71 0.00 42.86 3.51
2759 3037 2.810852 CAAAGCAGAGAGGAACAACTCC 59.189 50.000 0.00 0.00 45.81 3.85
2771 3049 3.568430 GGAACAACTCCCACAACTTAAGG 59.432 47.826 7.53 0.00 38.44 2.69
2780 3058 3.636764 CCCACAACTTAAGGCTTTGACTT 59.363 43.478 4.45 0.00 34.14 3.01
2781 3059 4.099419 CCCACAACTTAAGGCTTTGACTTT 59.901 41.667 4.45 0.00 31.11 2.66
2782 3060 5.300792 CCCACAACTTAAGGCTTTGACTTTA 59.699 40.000 4.45 0.00 31.11 1.85
2783 3061 6.438763 CCACAACTTAAGGCTTTGACTTTAG 58.561 40.000 4.45 0.00 34.01 1.85
2784 3062 6.262273 CCACAACTTAAGGCTTTGACTTTAGA 59.738 38.462 4.45 0.00 31.89 2.10
2785 3063 7.355778 CACAACTTAAGGCTTTGACTTTAGAG 58.644 38.462 4.45 1.97 31.89 2.43
2786 3064 6.486993 ACAACTTAAGGCTTTGACTTTAGAGG 59.513 38.462 4.45 1.37 31.89 3.69
2787 3065 6.435292 ACTTAAGGCTTTGACTTTAGAGGA 57.565 37.500 4.45 0.00 31.89 3.71
2788 3066 6.468543 ACTTAAGGCTTTGACTTTAGAGGAG 58.531 40.000 4.45 0.00 31.89 3.69
2789 3067 3.990959 AGGCTTTGACTTTAGAGGAGG 57.009 47.619 0.00 0.00 0.00 4.30
2790 3068 3.252351 AGGCTTTGACTTTAGAGGAGGT 58.748 45.455 0.00 0.00 0.00 3.85
2791 3069 3.008485 AGGCTTTGACTTTAGAGGAGGTG 59.992 47.826 0.00 0.00 0.00 4.00
2792 3070 3.008049 GGCTTTGACTTTAGAGGAGGTGA 59.992 47.826 0.00 0.00 0.00 4.02
2793 3071 3.997681 GCTTTGACTTTAGAGGAGGTGAC 59.002 47.826 0.00 0.00 0.00 3.67
2794 3072 4.503296 GCTTTGACTTTAGAGGAGGTGACA 60.503 45.833 0.00 0.00 0.00 3.58
2795 3073 4.602340 TTGACTTTAGAGGAGGTGACAC 57.398 45.455 0.00 0.00 0.00 3.67
2796 3074 2.897969 TGACTTTAGAGGAGGTGACACC 59.102 50.000 17.43 17.43 42.11 4.16
2797 3075 2.897969 GACTTTAGAGGAGGTGACACCA 59.102 50.000 26.30 1.35 44.58 4.17
2798 3076 3.314693 ACTTTAGAGGAGGTGACACCAA 58.685 45.455 26.30 8.01 44.58 3.67
2799 3077 3.071167 ACTTTAGAGGAGGTGACACCAAC 59.929 47.826 26.30 17.50 44.58 3.77
2800 3078 2.391926 TAGAGGAGGTGACACCAACA 57.608 50.000 26.30 2.60 44.58 3.33
2801 3079 1.507140 AGAGGAGGTGACACCAACAA 58.493 50.000 26.30 0.00 44.58 2.83
2802 3080 1.843851 AGAGGAGGTGACACCAACAAA 59.156 47.619 26.30 0.00 44.58 2.83
2803 3081 2.158755 AGAGGAGGTGACACCAACAAAG 60.159 50.000 26.30 0.00 44.58 2.77
2804 3082 0.668535 GGAGGTGACACCAACAAAGC 59.331 55.000 26.30 6.37 41.95 3.51
2805 3083 1.388547 GAGGTGACACCAACAAAGCA 58.611 50.000 26.30 0.00 41.95 3.91
2806 3084 1.065551 GAGGTGACACCAACAAAGCAC 59.934 52.381 26.30 2.91 41.95 4.40
2807 3085 0.814457 GGTGACACCAACAAAGCACA 59.186 50.000 20.14 0.00 38.42 4.57
2808 3086 1.408702 GGTGACACCAACAAAGCACAT 59.591 47.619 20.14 0.00 38.42 3.21
2809 3087 2.462889 GTGACACCAACAAAGCACATG 58.537 47.619 0.00 0.00 0.00 3.21
2810 3088 2.098614 TGACACCAACAAAGCACATGT 58.901 42.857 0.00 0.00 0.00 3.21
2811 3089 2.495270 TGACACCAACAAAGCACATGTT 59.505 40.909 0.00 0.00 41.50 2.71
2834 3112 0.664166 CCACGTTCATGCTTTGCACC 60.664 55.000 0.00 0.00 43.04 5.01
2835 3113 0.311790 CACGTTCATGCTTTGCACCT 59.688 50.000 0.00 0.00 43.04 4.00
2837 3115 1.535462 ACGTTCATGCTTTGCACCTAC 59.465 47.619 0.00 0.00 43.04 3.18
2838 3116 1.535028 CGTTCATGCTTTGCACCTACA 59.465 47.619 0.00 0.00 43.04 2.74
2839 3117 2.665519 CGTTCATGCTTTGCACCTACAC 60.666 50.000 0.00 0.00 43.04 2.90
2860 3138 5.577945 ACACAAAATACATGCAAGCAATAGC 59.422 36.000 0.00 0.00 42.56 2.97
2874 3153 2.518949 CAATAGCGTGACATTGGCAAC 58.481 47.619 0.00 0.00 0.00 4.17
2925 3204 4.883585 GGACATTATGAGAGACCAATTGCA 59.116 41.667 0.00 0.00 0.00 4.08
2979 3258 3.853207 AGGCACGGGATAAGGATAGTAA 58.147 45.455 0.00 0.00 0.00 2.24
3012 3291 6.042093 ACCATCGTATGTTCTATCAAGGTCAT 59.958 38.462 0.00 0.00 0.00 3.06
3023 3302 1.634973 TCAAGGTCATGGAATGGAGCA 59.365 47.619 0.00 0.00 46.73 4.26
3024 3303 2.041485 TCAAGGTCATGGAATGGAGCAA 59.959 45.455 0.00 0.00 46.73 3.91
3027 3306 1.453155 GTCATGGAATGGAGCAACGT 58.547 50.000 0.00 0.00 46.73 3.99
3039 3318 1.134694 GCAACGTTCGGCTTGGATC 59.865 57.895 0.00 0.00 0.00 3.36
3040 3319 1.573829 GCAACGTTCGGCTTGGATCA 61.574 55.000 0.00 0.00 0.00 2.92
3048 3327 1.548973 CGGCTTGGATCACGCGTATC 61.549 60.000 13.44 15.03 29.05 2.24
3049 3328 0.529773 GGCTTGGATCACGCGTATCA 60.530 55.000 13.44 5.08 29.05 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.707764 GGTTGAGGCAGAAAAGAACTATTCT 59.292 40.000 0.00 0.00 43.15 2.40
7 8 5.390991 CGGTTGAGGCAGAAAAGAACTATTC 60.391 44.000 0.00 0.00 0.00 1.75
8 9 4.455877 CGGTTGAGGCAGAAAAGAACTATT 59.544 41.667 0.00 0.00 0.00 1.73
9 10 4.003648 CGGTTGAGGCAGAAAAGAACTAT 58.996 43.478 0.00 0.00 0.00 2.12
25 26 1.403679 CCAGTTCAAAACAGCGGTTGA 59.596 47.619 2.10 0.00 37.30 3.18
155 394 9.661954 GATATACCAAGATATCCCTCTATCCAA 57.338 37.037 0.00 0.00 34.12 3.53
184 423 1.550524 AGAAGATTGTCGCTGCCTACA 59.449 47.619 0.00 0.00 0.00 2.74
243 482 1.826054 CAGGGTGTGGTTGGCGAAA 60.826 57.895 0.00 0.00 0.00 3.46
342 587 0.250234 TGCTAAGACTCCGCAGCAAT 59.750 50.000 0.00 0.00 40.87 3.56
347 592 2.181777 CGCTGCTAAGACTCCGCA 59.818 61.111 0.00 0.00 0.00 5.69
421 666 2.684881 ACAGGTTCCTATGTACGTACGG 59.315 50.000 21.06 15.20 0.00 4.02
424 673 6.239217 TCTAGACAGGTTCCTATGTACGTA 57.761 41.667 0.00 0.00 0.00 3.57
451 700 6.098982 AGGTTCCTAGTATGAGATGGTTTGAG 59.901 42.308 0.00 0.00 0.00 3.02
454 703 5.726793 ACAGGTTCCTAGTATGAGATGGTTT 59.273 40.000 0.00 0.00 0.00 3.27
457 706 5.144100 AGACAGGTTCCTAGTATGAGATGG 58.856 45.833 0.00 0.00 0.00 3.51
460 709 6.826632 TCTAGACAGGTTCCTAGTATGAGA 57.173 41.667 0.00 0.00 35.20 3.27
461 710 8.472007 AAATCTAGACAGGTTCCTAGTATGAG 57.528 38.462 0.00 0.00 35.20 2.90
475 724 8.091449 ACTTACAAACTGGAGAAATCTAGACAG 58.909 37.037 0.00 0.00 0.00 3.51
476 725 7.963532 ACTTACAAACTGGAGAAATCTAGACA 58.036 34.615 0.00 0.00 0.00 3.41
478 727 8.429641 ACAACTTACAAACTGGAGAAATCTAGA 58.570 33.333 0.00 0.00 0.00 2.43
479 728 8.608844 ACAACTTACAAACTGGAGAAATCTAG 57.391 34.615 0.00 0.00 0.00 2.43
480 729 8.974060 AACAACTTACAAACTGGAGAAATCTA 57.026 30.769 0.00 0.00 0.00 1.98
481 730 7.254795 CGAACAACTTACAAACTGGAGAAATCT 60.255 37.037 0.00 0.00 0.00 2.40
483 732 6.317893 ACGAACAACTTACAAACTGGAGAAAT 59.682 34.615 0.00 0.00 0.00 2.17
484 733 5.644636 ACGAACAACTTACAAACTGGAGAAA 59.355 36.000 0.00 0.00 0.00 2.52
485 734 5.180271 ACGAACAACTTACAAACTGGAGAA 58.820 37.500 0.00 0.00 0.00 2.87
487 736 4.317839 CGACGAACAACTTACAAACTGGAG 60.318 45.833 0.00 0.00 0.00 3.86
523 781 1.976474 GGCCGACAAATTCAGCCCA 60.976 57.895 0.00 0.00 41.53 5.36
566 824 7.718753 AGCCTAATCACAAGGAGAAATATTCTG 59.281 37.037 0.00 0.00 40.87 3.02
597 855 2.183478 TTGTGCATCGATGTTCCACT 57.817 45.000 25.47 0.00 0.00 4.00
645 903 6.142817 ACAATGAAACCGAAATTTTCTCTCG 58.857 36.000 7.50 0.00 34.58 4.04
678 936 5.689383 TCATCTGCTCAACCAAAACTAAC 57.311 39.130 0.00 0.00 0.00 2.34
702 960 3.392285 TCTGCAGCTCATATGGTAACCAT 59.608 43.478 9.47 0.00 46.99 3.55
703 961 2.771372 TCTGCAGCTCATATGGTAACCA 59.229 45.455 9.47 0.00 38.19 3.67
704 962 3.475566 TCTGCAGCTCATATGGTAACC 57.524 47.619 9.47 0.00 0.00 2.85
705 963 4.384056 ACATCTGCAGCTCATATGGTAAC 58.616 43.478 9.47 0.00 34.61 2.50
706 964 4.694760 ACATCTGCAGCTCATATGGTAA 57.305 40.909 9.47 0.00 34.61 2.85
707 965 6.437162 TGTATACATCTGCAGCTCATATGGTA 59.563 38.462 9.47 2.74 34.61 3.25
708 966 4.904895 ATACATCTGCAGCTCATATGGT 57.095 40.909 9.47 0.00 34.61 3.55
709 967 5.727434 TGTATACATCTGCAGCTCATATGG 58.273 41.667 9.47 0.00 34.61 2.74
710 968 7.845066 AATGTATACATCTGCAGCTCATATG 57.155 36.000 18.52 9.81 35.10 1.78
711 969 8.098912 TGAAATGTATACATCTGCAGCTCATAT 58.901 33.333 18.52 6.82 35.10 1.78
712 970 7.444299 TGAAATGTATACATCTGCAGCTCATA 58.556 34.615 18.52 1.09 35.10 2.15
713 971 6.293698 TGAAATGTATACATCTGCAGCTCAT 58.706 36.000 18.52 2.09 35.10 2.90
714 972 5.673514 TGAAATGTATACATCTGCAGCTCA 58.326 37.500 18.52 9.77 35.10 4.26
715 973 5.757320 ACTGAAATGTATACATCTGCAGCTC 59.243 40.000 26.23 14.31 35.10 4.09
716 974 5.526479 CACTGAAATGTATACATCTGCAGCT 59.474 40.000 26.23 17.55 35.10 4.24
717 975 5.277683 CCACTGAAATGTATACATCTGCAGC 60.278 44.000 26.23 13.25 35.10 5.25
718 976 6.051074 TCCACTGAAATGTATACATCTGCAG 58.949 40.000 25.44 25.44 35.10 4.41
719 977 5.988287 TCCACTGAAATGTATACATCTGCA 58.012 37.500 18.52 14.64 35.10 4.41
720 978 5.468072 CCTCCACTGAAATGTATACATCTGC 59.532 44.000 18.52 11.20 35.10 4.26
721 979 5.468072 GCCTCCACTGAAATGTATACATCTG 59.532 44.000 18.52 13.72 35.10 2.90
722 980 5.367937 AGCCTCCACTGAAATGTATACATCT 59.632 40.000 18.52 4.94 35.10 2.90
723 981 5.468072 CAGCCTCCACTGAAATGTATACATC 59.532 44.000 18.52 9.00 40.25 3.06
724 982 5.130975 TCAGCCTCCACTGAAATGTATACAT 59.869 40.000 12.75 12.75 43.59 2.29
725 983 4.469586 TCAGCCTCCACTGAAATGTATACA 59.530 41.667 8.27 8.27 43.59 2.29
726 984 5.023533 TCAGCCTCCACTGAAATGTATAC 57.976 43.478 0.00 0.00 43.59 1.47
748 1011 8.650143 TCATTTAAAGATTTAACAGGAGGCTT 57.350 30.769 0.00 0.00 32.77 4.35
769 1032 8.362639 GGTAACCATATCATCAGCAATTTCATT 58.637 33.333 0.00 0.00 0.00 2.57
770 1033 7.506599 TGGTAACCATATCATCAGCAATTTCAT 59.493 33.333 0.00 0.00 0.00 2.57
772 1035 7.275888 TGGTAACCATATCATCAGCAATTTC 57.724 36.000 0.00 0.00 0.00 2.17
793 1057 5.452496 CGATCTTGACCTCAGTTCATATGGT 60.452 44.000 2.13 0.00 0.00 3.55
802 1066 2.239400 TGTCACGATCTTGACCTCAGT 58.761 47.619 24.75 0.00 44.63 3.41
816 1080 0.658244 GTGTGCAGCAACATGTCACG 60.658 55.000 0.00 0.00 33.03 4.35
885 1149 1.127567 CCAGGGGACACACTCCAGAA 61.128 60.000 0.00 0.00 42.78 3.02
887 1151 1.536418 TCCAGGGGACACACTCCAG 60.536 63.158 0.00 0.00 42.78 3.86
907 1171 1.545582 GTGCATACACAACTGCCCATT 59.454 47.619 0.00 0.00 46.61 3.16
920 1184 3.692576 CAGTAGTACTGTCCGTGCATAC 58.307 50.000 20.29 0.00 41.19 2.39
932 1196 3.958018 AGCAGCAGTAGACAGTAGTACT 58.042 45.455 0.00 0.00 0.00 2.73
933 1197 4.634883 TGTAGCAGCAGTAGACAGTAGTAC 59.365 45.833 0.00 0.00 0.00 2.73
934 1198 4.840271 TGTAGCAGCAGTAGACAGTAGTA 58.160 43.478 0.00 0.00 0.00 1.82
935 1199 3.687125 TGTAGCAGCAGTAGACAGTAGT 58.313 45.455 0.00 0.00 0.00 2.73
936 1200 4.703645 TTGTAGCAGCAGTAGACAGTAG 57.296 45.455 0.00 0.00 0.00 2.57
937 1201 5.010719 AGTTTTGTAGCAGCAGTAGACAGTA 59.989 40.000 0.00 0.00 0.00 2.74
938 1202 4.058817 GTTTTGTAGCAGCAGTAGACAGT 58.941 43.478 0.00 0.00 0.00 3.55
939 1203 4.151335 CAGTTTTGTAGCAGCAGTAGACAG 59.849 45.833 0.00 0.00 0.00 3.51
940 1204 4.058124 CAGTTTTGTAGCAGCAGTAGACA 58.942 43.478 0.00 0.00 0.00 3.41
941 1205 3.433615 CCAGTTTTGTAGCAGCAGTAGAC 59.566 47.826 0.00 0.00 0.00 2.59
942 1206 3.664107 CCAGTTTTGTAGCAGCAGTAGA 58.336 45.455 0.00 0.00 0.00 2.59
943 1207 2.160417 GCCAGTTTTGTAGCAGCAGTAG 59.840 50.000 0.00 0.00 0.00 2.57
951 1215 2.469826 GTTTGGTGCCAGTTTTGTAGC 58.530 47.619 0.00 0.00 0.00 3.58
1350 1615 2.787601 TGAGTGAACCACGTAGACAC 57.212 50.000 0.00 0.00 39.64 3.67
1351 1616 2.035449 CCTTGAGTGAACCACGTAGACA 59.965 50.000 0.00 0.00 39.64 3.41
1352 1617 2.035576 ACCTTGAGTGAACCACGTAGAC 59.964 50.000 0.00 0.00 39.64 2.59
1353 1618 2.295349 GACCTTGAGTGAACCACGTAGA 59.705 50.000 0.00 0.00 39.64 2.59
1354 1619 2.035449 TGACCTTGAGTGAACCACGTAG 59.965 50.000 0.00 0.00 39.64 3.51
1355 1620 2.033372 TGACCTTGAGTGAACCACGTA 58.967 47.619 0.00 0.00 39.64 3.57
1360 1625 2.191128 ATGCTGACCTTGAGTGAACC 57.809 50.000 0.00 0.00 0.00 3.62
1370 1635 1.662608 CGCTCCGATATGCTGACCT 59.337 57.895 0.00 0.00 0.00 3.85
1372 1637 0.668706 ATGCGCTCCGATATGCTGAC 60.669 55.000 9.73 0.00 0.00 3.51
1374 1639 1.632948 CCATGCGCTCCGATATGCTG 61.633 60.000 9.73 0.00 0.00 4.41
1375 1640 1.375140 CCATGCGCTCCGATATGCT 60.375 57.895 9.73 0.00 0.00 3.79
1377 1642 1.229975 TTGCCATGCGCTCCGATATG 61.230 55.000 9.73 2.08 38.78 1.78
1395 1662 1.924524 CGGCGAAGATAATCACGTGTT 59.075 47.619 16.51 11.56 0.00 3.32
1398 1665 0.458669 ACCGGCGAAGATAATCACGT 59.541 50.000 9.30 0.00 0.00 4.49
1399 1666 1.129326 GACCGGCGAAGATAATCACG 58.871 55.000 9.30 0.00 0.00 4.35
1400 1667 1.129326 CGACCGGCGAAGATAATCAC 58.871 55.000 9.30 0.00 44.57 3.06
1401 1668 0.031585 CCGACCGGCGAAGATAATCA 59.968 55.000 17.96 0.00 44.57 2.57
1402 1669 2.810486 CCGACCGGCGAAGATAATC 58.190 57.895 17.96 0.00 44.57 1.75
1492 1769 2.671619 ATCACCCCGGCGTTGTTG 60.672 61.111 6.01 0.00 0.00 3.33
1766 2043 4.436998 CTGCACGTCGACCCCTCC 62.437 72.222 10.58 0.00 0.00 4.30
2075 2352 2.483106 TCGTGAGACAGTTTCCTACTCG 59.517 50.000 0.00 0.00 31.52 4.18
2126 2403 2.748605 GTGAGTGACAAGTGAGAGTGG 58.251 52.381 0.00 0.00 0.00 4.00
2128 2405 2.292016 CTCGTGAGTGACAAGTGAGAGT 59.708 50.000 0.00 0.00 30.92 3.24
2132 2409 1.337071 GTCCTCGTGAGTGACAAGTGA 59.663 52.381 11.30 0.00 32.51 3.41
2133 2410 1.338337 AGTCCTCGTGAGTGACAAGTG 59.662 52.381 15.89 0.00 33.75 3.16
2134 2411 1.609555 GAGTCCTCGTGAGTGACAAGT 59.390 52.381 15.89 1.99 33.75 3.16
2135 2412 1.400371 CGAGTCCTCGTGAGTGACAAG 60.400 57.143 8.50 8.72 46.99 3.16
2136 2413 0.591659 CGAGTCCTCGTGAGTGACAA 59.408 55.000 8.50 0.00 46.99 3.18
2137 2414 2.244946 CGAGTCCTCGTGAGTGACA 58.755 57.895 8.50 0.00 46.99 3.58
2141 2418 4.583183 ACTCCATCGAGTCCTCGTGAGT 62.583 54.545 21.61 21.61 46.90 3.41
2142 2419 2.014574 ACTCCATCGAGTCCTCGTGAG 61.015 57.143 15.59 18.80 46.90 3.51
2143 2420 0.035343 ACTCCATCGAGTCCTCGTGA 60.035 55.000 15.59 10.23 46.90 4.35
2144 2421 0.099613 CACTCCATCGAGTCCTCGTG 59.900 60.000 15.59 12.57 46.90 4.35
2145 2422 0.035343 TCACTCCATCGAGTCCTCGT 60.035 55.000 15.59 1.91 46.90 4.18
2146 2423 1.313772 ATCACTCCATCGAGTCCTCG 58.686 55.000 10.36 10.36 46.90 4.63
2147 2424 2.817258 CCTATCACTCCATCGAGTCCTC 59.183 54.545 0.00 0.00 46.90 3.71
2148 2425 2.443632 TCCTATCACTCCATCGAGTCCT 59.556 50.000 0.00 0.00 46.90 3.85
2149 2426 2.865079 TCCTATCACTCCATCGAGTCC 58.135 52.381 0.00 0.00 46.90 3.85
2150 2427 5.392595 GCTATTCCTATCACTCCATCGAGTC 60.393 48.000 0.00 0.00 46.90 3.36
2152 2429 4.438065 CGCTATTCCTATCACTCCATCGAG 60.438 50.000 0.00 0.00 42.32 4.04
2153 2430 3.440522 CGCTATTCCTATCACTCCATCGA 59.559 47.826 0.00 0.00 0.00 3.59
2154 2431 3.763902 CGCTATTCCTATCACTCCATCG 58.236 50.000 0.00 0.00 0.00 3.84
2155 2432 3.056536 TGCGCTATTCCTATCACTCCATC 60.057 47.826 9.73 0.00 0.00 3.51
2156 2433 2.899900 TGCGCTATTCCTATCACTCCAT 59.100 45.455 9.73 0.00 0.00 3.41
2157 2434 2.316108 TGCGCTATTCCTATCACTCCA 58.684 47.619 9.73 0.00 0.00 3.86
2158 2435 3.060602 GTTGCGCTATTCCTATCACTCC 58.939 50.000 9.73 0.00 0.00 3.85
2159 2436 3.060602 GGTTGCGCTATTCCTATCACTC 58.939 50.000 9.73 0.00 0.00 3.51
2160 2437 2.545952 CGGTTGCGCTATTCCTATCACT 60.546 50.000 9.73 0.00 0.00 3.41
2161 2438 1.792949 CGGTTGCGCTATTCCTATCAC 59.207 52.381 9.73 0.00 0.00 3.06
2162 2439 1.411246 ACGGTTGCGCTATTCCTATCA 59.589 47.619 9.73 0.00 0.00 2.15
2163 2440 2.150397 ACGGTTGCGCTATTCCTATC 57.850 50.000 9.73 0.00 0.00 2.08
2164 2441 2.614829 AACGGTTGCGCTATTCCTAT 57.385 45.000 9.73 0.00 0.00 2.57
2165 2442 2.389962 AAACGGTTGCGCTATTCCTA 57.610 45.000 9.73 0.00 0.00 2.94
2166 2443 1.467342 GAAAACGGTTGCGCTATTCCT 59.533 47.619 9.73 0.00 0.00 3.36
2167 2444 1.198178 TGAAAACGGTTGCGCTATTCC 59.802 47.619 9.73 4.81 0.00 3.01
2168 2445 2.604969 TGAAAACGGTTGCGCTATTC 57.395 45.000 9.73 1.82 0.00 1.75
2169 2446 3.569250 AATGAAAACGGTTGCGCTATT 57.431 38.095 9.73 0.00 0.00 1.73
2170 2447 3.569250 AAATGAAAACGGTTGCGCTAT 57.431 38.095 9.73 0.00 0.00 2.97
2171 2448 3.046390 CAAAATGAAAACGGTTGCGCTA 58.954 40.909 9.73 0.00 0.00 4.26
2172 2449 1.857837 CAAAATGAAAACGGTTGCGCT 59.142 42.857 9.73 0.00 0.00 5.92
2173 2450 1.855360 TCAAAATGAAAACGGTTGCGC 59.145 42.857 0.00 0.00 0.00 6.09
2174 2451 4.707210 AATCAAAATGAAAACGGTTGCG 57.293 36.364 0.00 0.00 0.00 4.85
2175 2452 6.070829 GCTTAATCAAAATGAAAACGGTTGC 58.929 36.000 0.00 0.00 0.00 4.17
2176 2453 6.201806 TGGCTTAATCAAAATGAAAACGGTTG 59.798 34.615 0.00 0.00 0.00 3.77
2177 2454 6.284459 TGGCTTAATCAAAATGAAAACGGTT 58.716 32.000 0.00 0.00 0.00 4.44
2178 2455 5.848406 TGGCTTAATCAAAATGAAAACGGT 58.152 33.333 0.00 0.00 0.00 4.83
2179 2456 6.966435 ATGGCTTAATCAAAATGAAAACGG 57.034 33.333 0.00 0.00 0.00 4.44
2189 2466 9.255304 GCCGAATATTTTTATGGCTTAATCAAA 57.745 29.630 8.47 0.00 39.38 2.69
2190 2467 8.810652 GCCGAATATTTTTATGGCTTAATCAA 57.189 30.769 8.47 0.00 39.38 2.57
2198 2475 4.681483 GCTTCAGCCGAATATTTTTATGGC 59.319 41.667 7.93 7.93 42.76 4.40
2199 2476 5.830912 TGCTTCAGCCGAATATTTTTATGG 58.169 37.500 0.00 0.00 41.18 2.74
2200 2477 6.198966 GGTTGCTTCAGCCGAATATTTTTATG 59.801 38.462 0.00 0.00 41.18 1.90
2201 2478 6.096846 AGGTTGCTTCAGCCGAATATTTTTAT 59.903 34.615 0.00 0.00 39.74 1.40
2202 2479 5.417580 AGGTTGCTTCAGCCGAATATTTTTA 59.582 36.000 0.00 0.00 39.74 1.52
2203 2480 4.220602 AGGTTGCTTCAGCCGAATATTTTT 59.779 37.500 0.00 0.00 39.74 1.94
2204 2481 3.763897 AGGTTGCTTCAGCCGAATATTTT 59.236 39.130 0.00 0.00 39.74 1.82
2205 2482 3.356290 AGGTTGCTTCAGCCGAATATTT 58.644 40.909 0.00 0.00 39.74 1.40
2206 2483 3.004752 AGGTTGCTTCAGCCGAATATT 57.995 42.857 0.00 0.00 39.74 1.28
2207 2484 2.684881 CAAGGTTGCTTCAGCCGAATAT 59.315 45.455 0.00 0.00 39.74 1.28
2208 2485 2.083774 CAAGGTTGCTTCAGCCGAATA 58.916 47.619 0.00 0.00 39.74 1.75
2209 2486 0.883833 CAAGGTTGCTTCAGCCGAAT 59.116 50.000 0.00 0.00 39.74 3.34
2210 2487 0.465460 ACAAGGTTGCTTCAGCCGAA 60.465 50.000 0.00 0.00 39.74 4.30
2211 2488 0.394938 TACAAGGTTGCTTCAGCCGA 59.605 50.000 0.00 0.00 39.74 5.54
2212 2489 1.131126 CATACAAGGTTGCTTCAGCCG 59.869 52.381 0.00 0.00 39.74 5.52
2213 2490 1.135286 GCATACAAGGTTGCTTCAGCC 60.135 52.381 0.00 0.00 41.18 4.85
2214 2491 1.466360 CGCATACAAGGTTGCTTCAGC 60.466 52.381 0.00 0.00 42.50 4.26
2215 2492 1.131126 CCGCATACAAGGTTGCTTCAG 59.869 52.381 0.00 0.00 36.71 3.02
2216 2493 1.164411 CCGCATACAAGGTTGCTTCA 58.836 50.000 0.00 0.00 36.71 3.02
2217 2494 0.179163 GCCGCATACAAGGTTGCTTC 60.179 55.000 0.00 0.00 36.71 3.86
2218 2495 0.609131 AGCCGCATACAAGGTTGCTT 60.609 50.000 0.00 0.00 36.71 3.91
2219 2496 1.002134 AGCCGCATACAAGGTTGCT 60.002 52.632 0.00 0.00 36.71 3.91
2220 2497 1.026718 AGAGCCGCATACAAGGTTGC 61.027 55.000 0.00 0.00 35.50 4.17
2221 2498 1.453155 AAGAGCCGCATACAAGGTTG 58.547 50.000 0.00 0.00 0.00 3.77
2222 2499 3.343941 TTAAGAGCCGCATACAAGGTT 57.656 42.857 0.00 0.00 0.00 3.50
2223 2500 3.560636 ATTAAGAGCCGCATACAAGGT 57.439 42.857 0.00 0.00 0.00 3.50
2224 2501 6.371809 TTTTATTAAGAGCCGCATACAAGG 57.628 37.500 0.00 0.00 0.00 3.61
2225 2502 7.472543 ACTTTTTATTAAGAGCCGCATACAAG 58.527 34.615 0.00 0.00 0.00 3.16
2226 2503 7.385778 ACTTTTTATTAAGAGCCGCATACAA 57.614 32.000 0.00 0.00 0.00 2.41
2227 2504 6.995511 ACTTTTTATTAAGAGCCGCATACA 57.004 33.333 0.00 0.00 0.00 2.29
2228 2505 6.196538 GCAACTTTTTATTAAGAGCCGCATAC 59.803 38.462 0.00 0.00 0.00 2.39
2229 2506 6.094881 AGCAACTTTTTATTAAGAGCCGCATA 59.905 34.615 0.00 0.00 33.45 3.14
2230 2507 5.102313 GCAACTTTTTATTAAGAGCCGCAT 58.898 37.500 0.00 0.00 0.00 4.73
2231 2508 4.217550 AGCAACTTTTTATTAAGAGCCGCA 59.782 37.500 0.00 0.00 33.45 5.69
2232 2509 4.733850 AGCAACTTTTTATTAAGAGCCGC 58.266 39.130 0.00 0.00 33.45 6.53
2233 2510 8.736751 TTTTAGCAACTTTTTATTAAGAGCCG 57.263 30.769 0.00 0.00 33.45 5.52
2242 2519 9.762933 ACACATGTCATTTTAGCAACTTTTTAT 57.237 25.926 0.00 0.00 0.00 1.40
2244 2521 9.030301 GTACACATGTCATTTTAGCAACTTTTT 57.970 29.630 0.00 0.00 0.00 1.94
2245 2522 7.651704 GGTACACATGTCATTTTAGCAACTTTT 59.348 33.333 0.00 0.00 0.00 2.27
2246 2523 7.145323 GGTACACATGTCATTTTAGCAACTTT 58.855 34.615 0.00 0.00 0.00 2.66
2247 2524 6.567701 CGGTACACATGTCATTTTAGCAACTT 60.568 38.462 0.00 0.00 0.00 2.66
2248 2525 5.106712 CGGTACACATGTCATTTTAGCAACT 60.107 40.000 0.00 0.00 0.00 3.16
2249 2526 5.086058 CGGTACACATGTCATTTTAGCAAC 58.914 41.667 0.00 0.00 0.00 4.17
2250 2527 4.757657 ACGGTACACATGTCATTTTAGCAA 59.242 37.500 0.00 0.00 0.00 3.91
2251 2528 4.320023 ACGGTACACATGTCATTTTAGCA 58.680 39.130 0.00 0.00 0.00 3.49
2252 2529 4.491924 CGACGGTACACATGTCATTTTAGC 60.492 45.833 0.00 0.00 32.91 3.09
2253 2530 4.860352 TCGACGGTACACATGTCATTTTAG 59.140 41.667 0.00 0.00 32.91 1.85
2254 2531 4.622313 GTCGACGGTACACATGTCATTTTA 59.378 41.667 0.00 0.00 32.91 1.52
2255 2532 3.430895 GTCGACGGTACACATGTCATTTT 59.569 43.478 0.00 0.00 32.91 1.82
2256 2533 2.991190 GTCGACGGTACACATGTCATTT 59.009 45.455 0.00 0.00 32.91 2.32
2257 2534 2.230508 AGTCGACGGTACACATGTCATT 59.769 45.455 10.46 0.00 32.91 2.57
2258 2535 1.816835 AGTCGACGGTACACATGTCAT 59.183 47.619 10.46 0.00 32.91 3.06
2259 2536 1.241165 AGTCGACGGTACACATGTCA 58.759 50.000 10.46 0.00 32.91 3.58
2260 2537 3.476295 TTAGTCGACGGTACACATGTC 57.524 47.619 10.46 0.00 0.00 3.06
2261 2538 3.441222 TCATTAGTCGACGGTACACATGT 59.559 43.478 10.46 0.00 0.00 3.21
2262 2539 4.023739 TCATTAGTCGACGGTACACATG 57.976 45.455 10.46 6.17 0.00 3.21
2263 2540 4.707030 TTCATTAGTCGACGGTACACAT 57.293 40.909 10.46 0.00 0.00 3.21
2264 2541 4.022935 AGTTTCATTAGTCGACGGTACACA 60.023 41.667 10.46 0.00 0.00 3.72
2265 2542 4.479619 AGTTTCATTAGTCGACGGTACAC 58.520 43.478 10.46 2.82 0.00 2.90
2266 2543 4.771590 AGTTTCATTAGTCGACGGTACA 57.228 40.909 10.46 0.00 0.00 2.90
2267 2544 6.237045 CGTTTAGTTTCATTAGTCGACGGTAC 60.237 42.308 10.46 3.24 0.00 3.34
2268 2545 5.794945 CGTTTAGTTTCATTAGTCGACGGTA 59.205 40.000 10.46 0.00 0.00 4.02
2269 2546 4.618489 CGTTTAGTTTCATTAGTCGACGGT 59.382 41.667 10.46 0.00 0.00 4.83
2270 2547 4.853196 TCGTTTAGTTTCATTAGTCGACGG 59.147 41.667 10.46 1.54 0.00 4.79
2271 2548 5.003214 CCTCGTTTAGTTTCATTAGTCGACG 59.997 44.000 10.46 0.00 0.00 5.12
2272 2549 5.220172 GCCTCGTTTAGTTTCATTAGTCGAC 60.220 44.000 7.70 7.70 0.00 4.20
2273 2550 4.860907 GCCTCGTTTAGTTTCATTAGTCGA 59.139 41.667 0.00 0.00 0.00 4.20
2274 2551 4.032558 GGCCTCGTTTAGTTTCATTAGTCG 59.967 45.833 0.00 0.00 0.00 4.18
2275 2552 5.176592 AGGCCTCGTTTAGTTTCATTAGTC 58.823 41.667 0.00 0.00 0.00 2.59
2276 2553 5.161943 AGGCCTCGTTTAGTTTCATTAGT 57.838 39.130 0.00 0.00 0.00 2.24
2277 2554 5.642063 TGAAGGCCTCGTTTAGTTTCATTAG 59.358 40.000 5.23 0.00 0.00 1.73
2278 2555 5.553123 TGAAGGCCTCGTTTAGTTTCATTA 58.447 37.500 5.23 0.00 0.00 1.90
2279 2556 4.394729 TGAAGGCCTCGTTTAGTTTCATT 58.605 39.130 5.23 0.00 0.00 2.57
2280 2557 4.015872 TGAAGGCCTCGTTTAGTTTCAT 57.984 40.909 5.23 0.00 0.00 2.57
2281 2558 3.478857 TGAAGGCCTCGTTTAGTTTCA 57.521 42.857 5.23 0.00 0.00 2.69
2282 2559 4.379499 CCAATGAAGGCCTCGTTTAGTTTC 60.379 45.833 5.23 0.00 30.36 2.78
2283 2560 3.506067 CCAATGAAGGCCTCGTTTAGTTT 59.494 43.478 5.23 0.00 30.36 2.66
2284 2561 3.081804 CCAATGAAGGCCTCGTTTAGTT 58.918 45.455 5.23 0.00 30.36 2.24
2285 2562 2.304761 TCCAATGAAGGCCTCGTTTAGT 59.695 45.455 5.23 0.00 30.36 2.24
2286 2563 2.985896 TCCAATGAAGGCCTCGTTTAG 58.014 47.619 5.23 2.14 30.36 1.85
2287 2564 3.644966 ATCCAATGAAGGCCTCGTTTA 57.355 42.857 5.23 0.00 30.36 2.01
2288 2565 2.514458 ATCCAATGAAGGCCTCGTTT 57.486 45.000 5.23 0.00 30.36 3.60
2289 2566 2.514458 AATCCAATGAAGGCCTCGTT 57.486 45.000 5.23 4.68 33.24 3.85
2290 2567 2.290896 TGAAATCCAATGAAGGCCTCGT 60.291 45.455 5.23 0.00 0.00 4.18
2291 2568 2.368439 TGAAATCCAATGAAGGCCTCG 58.632 47.619 5.23 0.00 0.00 4.63
2292 2569 5.349061 AAATGAAATCCAATGAAGGCCTC 57.651 39.130 5.23 0.00 0.00 4.70
2293 2570 4.162888 GGAAATGAAATCCAATGAAGGCCT 59.837 41.667 0.00 0.00 36.92 5.19
2294 2571 4.162888 AGGAAATGAAATCCAATGAAGGCC 59.837 41.667 0.00 0.00 39.55 5.19
2295 2572 5.349061 AGGAAATGAAATCCAATGAAGGC 57.651 39.130 0.00 0.00 39.55 4.35
2296 2573 8.071177 AGTAAGGAAATGAAATCCAATGAAGG 57.929 34.615 0.00 0.00 39.55 3.46
2297 2574 9.578439 GAAGTAAGGAAATGAAATCCAATGAAG 57.422 33.333 0.00 0.00 39.55 3.02
2298 2575 8.531146 GGAAGTAAGGAAATGAAATCCAATGAA 58.469 33.333 0.00 0.00 39.55 2.57
2299 2576 7.124147 GGGAAGTAAGGAAATGAAATCCAATGA 59.876 37.037 0.00 0.00 39.55 2.57
2300 2577 7.093377 TGGGAAGTAAGGAAATGAAATCCAATG 60.093 37.037 0.00 0.00 39.55 2.82
2301 2578 6.959366 TGGGAAGTAAGGAAATGAAATCCAAT 59.041 34.615 0.00 0.00 39.55 3.16
2302 2579 6.318913 TGGGAAGTAAGGAAATGAAATCCAA 58.681 36.000 0.00 0.00 39.55 3.53
2303 2580 5.898120 TGGGAAGTAAGGAAATGAAATCCA 58.102 37.500 0.00 0.00 39.55 3.41
2304 2581 6.663523 TCTTGGGAAGTAAGGAAATGAAATCC 59.336 38.462 0.00 0.00 37.22 3.01
2305 2582 7.703058 TCTTGGGAAGTAAGGAAATGAAATC 57.297 36.000 0.00 0.00 0.00 2.17
2306 2583 8.491045 TTTCTTGGGAAGTAAGGAAATGAAAT 57.509 30.769 0.00 0.00 32.61 2.17
2307 2584 7.906199 TTTCTTGGGAAGTAAGGAAATGAAA 57.094 32.000 0.00 0.00 32.61 2.69
2308 2585 7.343316 TGTTTTCTTGGGAAGTAAGGAAATGAA 59.657 33.333 0.00 0.00 35.66 2.57
2309 2586 6.836527 TGTTTTCTTGGGAAGTAAGGAAATGA 59.163 34.615 0.00 0.00 35.66 2.57
2310 2587 6.923508 GTGTTTTCTTGGGAAGTAAGGAAATG 59.076 38.462 0.00 0.00 35.66 2.32
2311 2588 6.609616 TGTGTTTTCTTGGGAAGTAAGGAAAT 59.390 34.615 0.00 0.00 35.66 2.17
2312 2589 5.952947 TGTGTTTTCTTGGGAAGTAAGGAAA 59.047 36.000 0.00 0.00 31.83 3.13
2313 2590 5.358725 GTGTGTTTTCTTGGGAAGTAAGGAA 59.641 40.000 0.00 0.00 32.61 3.36
2314 2591 4.885325 GTGTGTTTTCTTGGGAAGTAAGGA 59.115 41.667 0.00 0.00 32.61 3.36
2315 2592 4.261031 CGTGTGTTTTCTTGGGAAGTAAGG 60.261 45.833 0.00 0.00 32.61 2.69
2316 2593 4.334481 ACGTGTGTTTTCTTGGGAAGTAAG 59.666 41.667 0.00 0.00 32.61 2.34
2317 2594 4.263435 ACGTGTGTTTTCTTGGGAAGTAA 58.737 39.130 0.00 0.00 32.61 2.24
2318 2595 3.872771 GACGTGTGTTTTCTTGGGAAGTA 59.127 43.478 0.00 0.00 32.61 2.24
2319 2596 2.681344 GACGTGTGTTTTCTTGGGAAGT 59.319 45.455 0.00 0.00 32.61 3.01
2320 2597 2.286184 CGACGTGTGTTTTCTTGGGAAG 60.286 50.000 0.00 0.00 32.61 3.46
2321 2598 1.666700 CGACGTGTGTTTTCTTGGGAA 59.333 47.619 0.00 0.00 0.00 3.97
2322 2599 1.292061 CGACGTGTGTTTTCTTGGGA 58.708 50.000 0.00 0.00 0.00 4.37
2323 2600 0.316689 GCGACGTGTGTTTTCTTGGG 60.317 55.000 0.00 0.00 0.00 4.12
2324 2601 0.375454 TGCGACGTGTGTTTTCTTGG 59.625 50.000 0.00 0.00 0.00 3.61
2325 2602 1.452717 GTGCGACGTGTGTTTTCTTG 58.547 50.000 0.00 0.00 0.00 3.02
2326 2603 0.375803 GGTGCGACGTGTGTTTTCTT 59.624 50.000 0.00 0.00 0.00 2.52
2327 2604 0.741574 TGGTGCGACGTGTGTTTTCT 60.742 50.000 0.00 0.00 0.00 2.52
2328 2605 0.097325 TTGGTGCGACGTGTGTTTTC 59.903 50.000 0.00 0.00 0.00 2.29
2329 2606 0.736053 ATTGGTGCGACGTGTGTTTT 59.264 45.000 0.00 0.00 0.00 2.43
2330 2607 1.584175 TATTGGTGCGACGTGTGTTT 58.416 45.000 0.00 0.00 0.00 2.83
2331 2608 1.803334 ATATTGGTGCGACGTGTGTT 58.197 45.000 0.00 0.00 0.00 3.32
2332 2609 1.803334 AATATTGGTGCGACGTGTGT 58.197 45.000 0.00 0.00 0.00 3.72
2333 2610 4.530094 AATAATATTGGTGCGACGTGTG 57.470 40.909 0.00 0.00 0.00 3.82
2334 2611 4.508861 GGTAATAATATTGGTGCGACGTGT 59.491 41.667 0.00 0.00 0.00 4.49
2335 2612 4.508492 TGGTAATAATATTGGTGCGACGTG 59.492 41.667 0.00 0.00 0.00 4.49
2336 2613 4.695396 TGGTAATAATATTGGTGCGACGT 58.305 39.130 0.00 0.00 0.00 4.34
2337 2614 5.660629 TTGGTAATAATATTGGTGCGACG 57.339 39.130 0.00 0.00 0.00 5.12
2338 2615 6.693978 GGTTTTGGTAATAATATTGGTGCGAC 59.306 38.462 0.00 0.00 0.00 5.19
2339 2616 6.603997 AGGTTTTGGTAATAATATTGGTGCGA 59.396 34.615 0.00 0.00 0.00 5.10
2340 2617 6.801575 AGGTTTTGGTAATAATATTGGTGCG 58.198 36.000 0.00 0.00 0.00 5.34
2341 2618 7.777095 TGAGGTTTTGGTAATAATATTGGTGC 58.223 34.615 0.00 0.00 0.00 5.01
2342 2619 9.581099 GTTGAGGTTTTGGTAATAATATTGGTG 57.419 33.333 0.00 0.00 0.00 4.17
2343 2620 9.541884 AGTTGAGGTTTTGGTAATAATATTGGT 57.458 29.630 0.00 0.00 0.00 3.67
2376 2653 6.943146 GGGTAGAGGAAGACAAGAATTTTTCT 59.057 38.462 0.00 0.00 43.15 2.52
2377 2654 6.715264 TGGGTAGAGGAAGACAAGAATTTTTC 59.285 38.462 0.00 0.00 0.00 2.29
2378 2655 6.610830 TGGGTAGAGGAAGACAAGAATTTTT 58.389 36.000 0.00 0.00 0.00 1.94
2379 2656 6.200878 TGGGTAGAGGAAGACAAGAATTTT 57.799 37.500 0.00 0.00 0.00 1.82
2380 2657 5.843019 TGGGTAGAGGAAGACAAGAATTT 57.157 39.130 0.00 0.00 0.00 1.82
2381 2658 5.749462 CATGGGTAGAGGAAGACAAGAATT 58.251 41.667 0.00 0.00 0.00 2.17
2382 2659 4.384647 GCATGGGTAGAGGAAGACAAGAAT 60.385 45.833 0.00 0.00 0.00 2.40
2383 2660 3.055094 GCATGGGTAGAGGAAGACAAGAA 60.055 47.826 0.00 0.00 0.00 2.52
2384 2661 2.501723 GCATGGGTAGAGGAAGACAAGA 59.498 50.000 0.00 0.00 0.00 3.02
2385 2662 2.420687 GGCATGGGTAGAGGAAGACAAG 60.421 54.545 0.00 0.00 0.00 3.16
2386 2663 1.559682 GGCATGGGTAGAGGAAGACAA 59.440 52.381 0.00 0.00 0.00 3.18
2387 2664 1.204146 GGCATGGGTAGAGGAAGACA 58.796 55.000 0.00 0.00 0.00 3.41
2388 2665 0.470341 GGGCATGGGTAGAGGAAGAC 59.530 60.000 0.00 0.00 0.00 3.01
2389 2666 1.048724 CGGGCATGGGTAGAGGAAGA 61.049 60.000 0.00 0.00 0.00 2.87
2390 2667 1.048724 TCGGGCATGGGTAGAGGAAG 61.049 60.000 0.00 0.00 0.00 3.46
2391 2668 0.619255 TTCGGGCATGGGTAGAGGAA 60.619 55.000 0.00 0.00 0.00 3.36
2392 2669 0.399949 ATTCGGGCATGGGTAGAGGA 60.400 55.000 0.00 0.00 0.00 3.71
2393 2670 0.035458 GATTCGGGCATGGGTAGAGG 59.965 60.000 0.00 0.00 0.00 3.69
2394 2671 0.758734 TGATTCGGGCATGGGTAGAG 59.241 55.000 0.00 0.00 0.00 2.43
2395 2672 1.208706 TTGATTCGGGCATGGGTAGA 58.791 50.000 0.00 0.00 0.00 2.59
2396 2673 2.051334 TTTGATTCGGGCATGGGTAG 57.949 50.000 0.00 0.00 0.00 3.18
2397 2674 2.746279 ATTTGATTCGGGCATGGGTA 57.254 45.000 0.00 0.00 0.00 3.69
2398 2675 1.864669 AATTTGATTCGGGCATGGGT 58.135 45.000 0.00 0.00 0.00 4.51
2399 2676 4.399004 TTTAATTTGATTCGGGCATGGG 57.601 40.909 0.00 0.00 0.00 4.00
2400 2677 5.846203 AGATTTAATTTGATTCGGGCATGG 58.154 37.500 0.00 0.00 0.00 3.66
2401 2678 7.382218 GGTAAGATTTAATTTGATTCGGGCATG 59.618 37.037 0.00 0.00 0.00 4.06
2402 2679 7.069331 TGGTAAGATTTAATTTGATTCGGGCAT 59.931 33.333 0.00 0.00 0.00 4.40
2403 2680 6.378564 TGGTAAGATTTAATTTGATTCGGGCA 59.621 34.615 0.00 0.00 0.00 5.36
2404 2681 6.801575 TGGTAAGATTTAATTTGATTCGGGC 58.198 36.000 0.00 0.00 0.00 6.13
2405 2682 9.646427 TTTTGGTAAGATTTAATTTGATTCGGG 57.354 29.630 0.00 0.00 0.00 5.14
2421 2698 8.748412 CCACCATATTTCAGATTTTTGGTAAGA 58.252 33.333 0.00 0.00 34.37 2.10
2422 2699 7.981225 CCCACCATATTTCAGATTTTTGGTAAG 59.019 37.037 0.00 0.00 34.37 2.34
2423 2700 7.456269 ACCCACCATATTTCAGATTTTTGGTAA 59.544 33.333 0.00 0.00 34.37 2.85
2424 2701 6.957020 ACCCACCATATTTCAGATTTTTGGTA 59.043 34.615 0.00 0.00 34.37 3.25
2425 2702 5.784906 ACCCACCATATTTCAGATTTTTGGT 59.215 36.000 0.00 0.00 36.46 3.67
2426 2703 6.108015 CACCCACCATATTTCAGATTTTTGG 58.892 40.000 0.00 0.00 0.00 3.28
2427 2704 5.581874 GCACCCACCATATTTCAGATTTTTG 59.418 40.000 0.00 0.00 0.00 2.44
2428 2705 5.248020 TGCACCCACCATATTTCAGATTTTT 59.752 36.000 0.00 0.00 0.00 1.94
2429 2706 4.776837 TGCACCCACCATATTTCAGATTTT 59.223 37.500 0.00 0.00 0.00 1.82
2430 2707 4.352009 TGCACCCACCATATTTCAGATTT 58.648 39.130 0.00 0.00 0.00 2.17
2431 2708 3.979911 TGCACCCACCATATTTCAGATT 58.020 40.909 0.00 0.00 0.00 2.40
2432 2709 3.668141 TGCACCCACCATATTTCAGAT 57.332 42.857 0.00 0.00 0.00 2.90
2433 2710 3.010027 TCTTGCACCCACCATATTTCAGA 59.990 43.478 0.00 0.00 0.00 3.27
2434 2711 3.355378 TCTTGCACCCACCATATTTCAG 58.645 45.455 0.00 0.00 0.00 3.02
2435 2712 3.448093 TCTTGCACCCACCATATTTCA 57.552 42.857 0.00 0.00 0.00 2.69
2436 2713 5.343307 AAATCTTGCACCCACCATATTTC 57.657 39.130 0.00 0.00 0.00 2.17
2437 2714 6.383726 ACATAAATCTTGCACCCACCATATTT 59.616 34.615 0.00 0.00 0.00 1.40
2438 2715 5.898972 ACATAAATCTTGCACCCACCATATT 59.101 36.000 0.00 0.00 0.00 1.28
2439 2716 5.457686 ACATAAATCTTGCACCCACCATAT 58.542 37.500 0.00 0.00 0.00 1.78
2440 2717 4.865905 ACATAAATCTTGCACCCACCATA 58.134 39.130 0.00 0.00 0.00 2.74
2441 2718 3.701040 GACATAAATCTTGCACCCACCAT 59.299 43.478 0.00 0.00 0.00 3.55
2442 2719 3.088532 GACATAAATCTTGCACCCACCA 58.911 45.455 0.00 0.00 0.00 4.17
2443 2720 3.088532 TGACATAAATCTTGCACCCACC 58.911 45.455 0.00 0.00 0.00 4.61
2444 2721 3.505680 TGTGACATAAATCTTGCACCCAC 59.494 43.478 0.00 0.00 0.00 4.61
2445 2722 3.505680 GTGTGACATAAATCTTGCACCCA 59.494 43.478 0.00 0.00 0.00 4.51
2446 2723 3.505680 TGTGTGACATAAATCTTGCACCC 59.494 43.478 0.00 0.00 0.00 4.61
2447 2724 4.475944 GTGTGTGACATAAATCTTGCACC 58.524 43.478 0.00 0.00 0.00 5.01
2448 2725 4.084066 TCGTGTGTGACATAAATCTTGCAC 60.084 41.667 0.00 0.00 0.00 4.57
2449 2726 4.061596 TCGTGTGTGACATAAATCTTGCA 58.938 39.130 0.00 0.00 0.00 4.08
2450 2727 4.661993 TCGTGTGTGACATAAATCTTGC 57.338 40.909 0.00 0.00 0.00 4.01
2451 2728 6.023435 CCAATCGTGTGTGACATAAATCTTG 58.977 40.000 0.00 0.00 0.00 3.02
2452 2729 5.705441 ACCAATCGTGTGTGACATAAATCTT 59.295 36.000 0.00 0.00 0.00 2.40
2453 2730 5.122239 CACCAATCGTGTGTGACATAAATCT 59.878 40.000 0.00 0.00 37.73 2.40
2454 2731 5.323900 CACCAATCGTGTGTGACATAAATC 58.676 41.667 0.00 0.00 37.73 2.17
2455 2732 5.295431 CACCAATCGTGTGTGACATAAAT 57.705 39.130 0.00 0.00 37.73 1.40
2456 2733 4.740741 CACCAATCGTGTGTGACATAAA 57.259 40.909 0.00 0.00 37.73 1.40
2475 2752 7.700656 GGCATACATATTTTACTGGTTCAACAC 59.299 37.037 0.00 0.00 0.00 3.32
2476 2753 7.147983 GGGCATACATATTTTACTGGTTCAACA 60.148 37.037 0.00 0.00 0.00 3.33
2477 2754 7.200455 GGGCATACATATTTTACTGGTTCAAC 58.800 38.462 0.00 0.00 0.00 3.18
2478 2755 6.322712 GGGGCATACATATTTTACTGGTTCAA 59.677 38.462 0.00 0.00 0.00 2.69
2479 2756 5.830991 GGGGCATACATATTTTACTGGTTCA 59.169 40.000 0.00 0.00 0.00 3.18
2480 2757 5.243060 GGGGGCATACATATTTTACTGGTTC 59.757 44.000 0.00 0.00 0.00 3.62
2481 2758 5.144832 GGGGGCATACATATTTTACTGGTT 58.855 41.667 0.00 0.00 0.00 3.67
2482 2759 4.736473 GGGGGCATACATATTTTACTGGT 58.264 43.478 0.00 0.00 0.00 4.00
2503 2780 4.764336 CACGTGCATTGCAGCGGG 62.764 66.667 25.86 21.82 40.08 6.13
2514 2791 1.999735 TCACTAGCTAATTGCACGTGC 59.000 47.619 33.11 33.11 45.94 5.34
2515 2792 4.093408 ACAATCACTAGCTAATTGCACGTG 59.907 41.667 12.28 12.28 45.94 4.49
2516 2793 4.253685 ACAATCACTAGCTAATTGCACGT 58.746 39.130 14.01 0.00 45.94 4.49
2517 2794 4.864916 ACAATCACTAGCTAATTGCACG 57.135 40.909 14.01 0.00 45.94 5.34
2518 2795 6.634436 GCATTACAATCACTAGCTAATTGCAC 59.366 38.462 14.01 0.40 45.94 4.57
2519 2796 6.318396 TGCATTACAATCACTAGCTAATTGCA 59.682 34.615 14.01 9.02 45.94 4.08
2520 2797 6.728200 TGCATTACAATCACTAGCTAATTGC 58.272 36.000 14.01 7.00 43.29 3.56
2521 2798 8.562052 TCATGCATTACAATCACTAGCTAATTG 58.438 33.333 12.93 12.93 36.64 2.32
2522 2799 8.681486 TCATGCATTACAATCACTAGCTAATT 57.319 30.769 0.00 0.00 0.00 1.40
2523 2800 7.935755 ACTCATGCATTACAATCACTAGCTAAT 59.064 33.333 0.00 0.00 0.00 1.73
2524 2801 7.275183 ACTCATGCATTACAATCACTAGCTAA 58.725 34.615 0.00 0.00 0.00 3.09
2529 2806 9.612066 TCAATAACTCATGCATTACAATCACTA 57.388 29.630 0.00 0.00 0.00 2.74
2544 2821 5.147330 TCGTGTGTTCCTCAATAACTCAT 57.853 39.130 0.00 0.00 34.14 2.90
2560 2837 2.519377 TGTTACCAGTCCTTCGTGTG 57.481 50.000 0.00 0.00 0.00 3.82
2562 2839 3.107642 ACTTGTTACCAGTCCTTCGTG 57.892 47.619 0.00 0.00 0.00 4.35
2565 2842 4.081322 TGGAACTTGTTACCAGTCCTTC 57.919 45.455 0.00 0.00 0.00 3.46
2598 2875 4.023279 CCGTTGTTTCATCAAGTCCATTCA 60.023 41.667 0.00 0.00 0.00 2.57
2604 2881 3.492313 GATGCCGTTGTTTCATCAAGTC 58.508 45.455 0.00 0.00 37.23 3.01
2609 2886 2.423185 TCATGGATGCCGTTGTTTCATC 59.577 45.455 0.00 0.00 36.71 2.92
2633 2910 8.093307 TGCTTACCTTTGAATTTTGCATTGATA 58.907 29.630 0.00 0.00 0.00 2.15
2634 2911 6.935771 TGCTTACCTTTGAATTTTGCATTGAT 59.064 30.769 0.00 0.00 0.00 2.57
2635 2912 6.286758 TGCTTACCTTTGAATTTTGCATTGA 58.713 32.000 0.00 0.00 0.00 2.57
2649 2927 8.760569 CAATTCGTTGTTATTTTGCTTACCTTT 58.239 29.630 0.00 0.00 0.00 3.11
2683 2961 1.954146 TTGCGTCGAAGGTCAGTGC 60.954 57.895 0.00 0.00 0.00 4.40
2689 2967 2.098443 ACAAATTTGTTGCGTCGAAGGT 59.902 40.909 18.13 0.00 38.47 3.50
2695 2973 4.356289 ACCAAGTACAAATTTGTTGCGTC 58.644 39.130 27.66 13.47 42.35 5.19
2697 2975 4.564769 ACAACCAAGTACAAATTTGTTGCG 59.435 37.500 27.66 15.57 42.35 4.85
2730 3008 3.023119 TCCTCTCTGCTTTGTTTTGCAA 58.977 40.909 0.00 0.00 38.81 4.08
2738 3016 2.810852 GGAGTTGTTCCTCTCTGCTTTG 59.189 50.000 0.00 0.00 43.16 2.77
2742 3020 0.687354 TGGGAGTTGTTCCTCTCTGC 59.313 55.000 0.00 0.00 45.98 4.26
2743 3021 1.694150 TGTGGGAGTTGTTCCTCTCTG 59.306 52.381 0.00 0.00 45.98 3.35
2759 3037 4.918810 AAGTCAAAGCCTTAAGTTGTGG 57.081 40.909 0.97 0.00 0.00 4.17
2771 3049 3.997681 GTCACCTCCTCTAAAGTCAAAGC 59.002 47.826 0.00 0.00 0.00 3.51
2780 3058 2.684943 TGTTGGTGTCACCTCCTCTAA 58.315 47.619 22.56 4.89 39.58 2.10
2781 3059 2.391926 TGTTGGTGTCACCTCCTCTA 57.608 50.000 22.56 0.00 39.58 2.43
2782 3060 1.507140 TTGTTGGTGTCACCTCCTCT 58.493 50.000 22.56 0.00 39.58 3.69
2783 3061 2.222027 CTTTGTTGGTGTCACCTCCTC 58.778 52.381 22.56 10.55 39.58 3.71
2784 3062 1.750682 GCTTTGTTGGTGTCACCTCCT 60.751 52.381 22.56 0.00 39.58 3.69
2785 3063 0.668535 GCTTTGTTGGTGTCACCTCC 59.331 55.000 22.56 13.05 39.58 4.30
2786 3064 1.065551 GTGCTTTGTTGGTGTCACCTC 59.934 52.381 22.56 15.35 39.58 3.85
2787 3065 1.102978 GTGCTTTGTTGGTGTCACCT 58.897 50.000 22.56 0.00 39.58 4.00
2788 3066 0.814457 TGTGCTTTGTTGGTGTCACC 59.186 50.000 15.64 15.64 39.22 4.02
2789 3067 2.159254 ACATGTGCTTTGTTGGTGTCAC 60.159 45.455 0.00 0.00 0.00 3.67
2790 3068 2.098614 ACATGTGCTTTGTTGGTGTCA 58.901 42.857 0.00 0.00 0.00 3.58
2791 3069 2.859538 CAACATGTGCTTTGTTGGTGTC 59.140 45.455 0.00 0.00 46.46 3.67
2792 3070 2.891112 CAACATGTGCTTTGTTGGTGT 58.109 42.857 0.00 0.00 46.46 4.16
2804 3082 0.380024 TGAACGTGGTGCAACATGTG 59.620 50.000 29.48 14.66 40.29 3.21
2805 3083 1.001487 CATGAACGTGGTGCAACATGT 60.001 47.619 23.96 23.96 42.10 3.21
2806 3084 1.688793 CATGAACGTGGTGCAACATG 58.311 50.000 22.45 22.45 39.98 3.21
2807 3085 0.039256 GCATGAACGTGGTGCAACAT 60.039 50.000 8.20 0.00 39.98 2.71
2808 3086 1.100463 AGCATGAACGTGGTGCAACA 61.100 50.000 18.39 0.00 41.19 3.33
2809 3087 0.030638 AAGCATGAACGTGGTGCAAC 59.969 50.000 18.39 0.00 41.19 4.17
2810 3088 0.743688 AAAGCATGAACGTGGTGCAA 59.256 45.000 18.39 0.00 41.19 4.08
2811 3089 0.030504 CAAAGCATGAACGTGGTGCA 59.969 50.000 18.39 3.53 41.19 4.57
2812 3090 1.277495 GCAAAGCATGAACGTGGTGC 61.277 55.000 10.93 10.93 39.10 5.01
2813 3091 0.030504 TGCAAAGCATGAACGTGGTG 59.969 50.000 0.00 0.00 31.71 4.17
2814 3092 0.030638 GTGCAAAGCATGAACGTGGT 59.969 50.000 0.00 0.00 41.91 4.16
2815 3093 0.664166 GGTGCAAAGCATGAACGTGG 60.664 55.000 0.00 0.00 41.91 4.94
2816 3094 0.311790 AGGTGCAAAGCATGAACGTG 59.688 50.000 0.00 0.00 41.91 4.49
2834 3112 7.043854 GCTATTGCTTGCATGTATTTTGTGTAG 60.044 37.037 1.14 0.00 36.03 2.74
2835 3113 6.751425 GCTATTGCTTGCATGTATTTTGTGTA 59.249 34.615 1.14 0.00 36.03 2.90
2837 3115 5.276020 CGCTATTGCTTGCATGTATTTTGTG 60.276 40.000 1.14 0.00 36.97 3.33
2838 3116 4.799949 CGCTATTGCTTGCATGTATTTTGT 59.200 37.500 1.14 0.00 36.97 2.83
2839 3117 4.799949 ACGCTATTGCTTGCATGTATTTTG 59.200 37.500 1.14 0.00 36.97 2.44
2860 3138 0.109179 CCATGGTTGCCAATGTCACG 60.109 55.000 2.57 0.00 36.95 4.35
2862 3140 0.178938 ACCCATGGTTGCCAATGTCA 60.179 50.000 11.73 0.00 36.95 3.58
2874 3153 7.287466 TCATTCTAATGATTTTGGTACCCATGG 59.713 37.037 10.07 4.14 40.32 3.66
2908 3187 6.602803 TGCTATTTTGCAATTGGTCTCTCATA 59.397 34.615 7.72 0.00 40.29 2.15
2910 3189 4.766373 TGCTATTTTGCAATTGGTCTCTCA 59.234 37.500 7.72 0.00 40.29 3.27
2925 3204 2.081462 CGGTCCTCGGTTTGCTATTTT 58.919 47.619 0.00 0.00 34.75 1.82
2954 3233 1.580059 TCCTTATCCCGTGCCTTCTT 58.420 50.000 0.00 0.00 0.00 2.52
2985 3264 7.068962 TGACCTTGATAGAACATACGATGGTTA 59.931 37.037 0.00 0.00 33.60 2.85
2993 3272 7.173907 CCATTCCATGACCTTGATAGAACATAC 59.826 40.741 0.00 0.00 0.00 2.39
3012 3291 0.953471 CCGAACGTTGCTCCATTCCA 60.953 55.000 5.00 0.00 0.00 3.53
3023 3302 1.289109 CGTGATCCAAGCCGAACGTT 61.289 55.000 0.00 0.00 0.00 3.99
3024 3303 1.736645 CGTGATCCAAGCCGAACGT 60.737 57.895 0.00 0.00 0.00 3.99
3027 3306 2.215465 TACGCGTGATCCAAGCCGAA 62.215 55.000 24.59 0.00 35.58 4.30
3039 3318 2.581409 GTCGGGGTGATACGCGTG 60.581 66.667 24.59 1.60 45.53 5.34
3040 3319 2.552585 CTTGTCGGGGTGATACGCGT 62.553 60.000 19.17 19.17 45.53 6.01
3048 3327 0.179029 AGTTGTTCCTTGTCGGGGTG 60.179 55.000 0.00 0.00 0.00 4.61
3049 3328 0.179029 CAGTTGTTCCTTGTCGGGGT 60.179 55.000 0.00 0.00 0.00 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.