Multiple sequence alignment - TraesCS7A01G354500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G354500 chr7A 100.000 2327 0 0 1 2327 519091328 519093654 0.000000e+00 4298.0
1 TraesCS7A01G354500 chr7D 82.055 1577 129 67 319 1836 476759469 476757988 0.000000e+00 1203.0
2 TraesCS7A01G354500 chr7D 90.741 270 17 6 1 270 476759743 476759482 1.020000e-93 353.0
3 TraesCS7A01G354500 chr7D 89.894 188 13 4 1 187 476776842 476776660 1.070000e-58 237.0
4 TraesCS7A01G354500 chr7D 86.175 217 15 8 1852 2063 476758004 476757798 1.080000e-53 220.0
5 TraesCS7A01G354500 chr7B 82.824 1473 108 57 306 1708 501320876 501319479 0.000000e+00 1184.0
6 TraesCS7A01G354500 chr7B 90.370 270 18 5 1 270 501321131 501320870 4.760000e-92 348.0
7 TraesCS7A01G354500 chr7B 84.360 211 21 8 1855 2063 501314093 501313893 1.820000e-46 196.0
8 TraesCS7A01G354500 chr7B 100.000 30 0 0 2119 2148 501310482 501310453 3.230000e-04 56.5
9 TraesCS7A01G354500 chr4D 91.935 62 2 1 2061 2122 493214107 493214049 1.480000e-12 84.2
10 TraesCS7A01G354500 chr1A 100.000 29 0 0 2293 2321 244309925 244309897 1.000000e-03 54.7
11 TraesCS7A01G354500 chr4B 100.000 28 0 0 2293 2320 585640112 585640139 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G354500 chr7A 519091328 519093654 2326 False 4298 4298 100.000000 1 2327 1 chr7A.!!$F1 2326
1 TraesCS7A01G354500 chr7D 476757798 476759743 1945 True 592 1203 86.323667 1 2063 3 chr7D.!!$R2 2062
2 TraesCS7A01G354500 chr7B 501319479 501321131 1652 True 766 1184 86.597000 1 1708 2 chr7B.!!$R2 1707

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
673 704 0.109039 GTCGGTTGCCAGAGAGAGAC 60.109 60.0 0.0 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1729 1811 0.033208 GGCCCATGGATTTGGTCTCA 60.033 55.0 15.22 0.0 34.77 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.643763 CCGATTCCTCTTTACTCCATCG 58.356 50.000 0.00 0.00 33.46 3.84
73 74 2.256461 GCTGAAAAGGGCGCACAG 59.744 61.111 14.57 10.64 0.00 3.66
75 76 1.871772 CTGAAAAGGGCGCACAGAG 59.128 57.895 14.57 0.00 0.00 3.35
82 83 1.889573 GGGCGCACAGAGATTAGCC 60.890 63.158 10.83 0.00 43.47 3.93
87 88 1.576356 GCACAGAGATTAGCCGGAAG 58.424 55.000 5.05 0.00 0.00 3.46
99 100 1.153469 CCGGAAGCTCTCTCTTGGC 60.153 63.158 0.00 0.00 0.00 4.52
104 105 2.125350 GCTCTCTCTTGGCCGTGG 60.125 66.667 0.00 0.00 0.00 4.94
168 169 1.707427 GGATCTAATCAGCCCCACCAT 59.293 52.381 0.00 0.00 0.00 3.55
256 257 1.754803 CTAATGGTAGGTGGCTCACGA 59.245 52.381 0.00 0.00 34.83 4.35
257 258 0.249398 AATGGTAGGTGGCTCACGAC 59.751 55.000 0.00 1.43 34.83 4.34
259 260 2.181021 GTAGGTGGCTCACGACGG 59.819 66.667 0.00 0.00 34.83 4.79
260 261 2.282674 TAGGTGGCTCACGACGGT 60.283 61.111 0.00 0.00 34.83 4.83
261 262 2.632544 TAGGTGGCTCACGACGGTG 61.633 63.158 0.00 0.00 45.78 4.94
262 263 4.295119 GGTGGCTCACGACGGTGT 62.295 66.667 0.00 0.00 44.68 4.16
263 264 2.733593 GTGGCTCACGACGGTGTC 60.734 66.667 0.00 0.00 44.68 3.67
264 265 3.986006 TGGCTCACGACGGTGTCC 61.986 66.667 0.00 0.00 44.68 4.02
265 266 4.736896 GGCTCACGACGGTGTCCC 62.737 72.222 0.00 0.00 44.68 4.46
266 267 3.986006 GCTCACGACGGTGTCCCA 61.986 66.667 0.00 0.00 44.68 4.37
267 268 2.258591 CTCACGACGGTGTCCCAG 59.741 66.667 0.00 0.00 44.68 4.45
268 269 3.916392 CTCACGACGGTGTCCCAGC 62.916 68.421 0.00 0.00 44.68 4.85
275 276 4.643387 GGTGTCCCAGCGTTGCCT 62.643 66.667 0.00 0.00 0.00 4.75
276 277 3.357079 GTGTCCCAGCGTTGCCTG 61.357 66.667 0.00 0.00 0.00 4.85
297 298 4.864334 GCCTGCGGCTGGTAGCAT 62.864 66.667 24.25 0.00 46.69 3.79
298 299 2.590007 CCTGCGGCTGGTAGCATC 60.590 66.667 16.91 0.00 44.75 3.91
299 300 2.590007 CTGCGGCTGGTAGCATCC 60.590 66.667 4.68 4.68 44.75 3.51
300 301 4.175337 TGCGGCTGGTAGCATCCC 62.175 66.667 9.12 5.58 44.75 3.85
301 302 4.937431 GCGGCTGGTAGCATCCCC 62.937 72.222 9.12 0.00 44.75 4.81
302 303 3.164269 CGGCTGGTAGCATCCCCT 61.164 66.667 9.12 0.00 44.75 4.79
303 304 2.746375 CGGCTGGTAGCATCCCCTT 61.746 63.158 9.12 0.00 44.75 3.95
304 305 1.149401 GGCTGGTAGCATCCCCTTC 59.851 63.158 3.33 0.00 44.75 3.46
308 309 2.461739 GGTAGCATCCCCTTCCCCC 61.462 68.421 0.00 0.00 0.00 5.40
312 313 3.015145 CATCCCCTTCCCCCACGT 61.015 66.667 0.00 0.00 0.00 4.49
315 316 4.043100 CCCCTTCCCCCACGTTCC 62.043 72.222 0.00 0.00 0.00 3.62
345 352 0.654683 GCTCGGCTTCATTGCTACTG 59.345 55.000 0.00 0.00 0.00 2.74
347 354 0.250234 TCGGCTTCATTGCTACTGCT 59.750 50.000 0.00 0.00 40.48 4.24
348 355 0.654683 CGGCTTCATTGCTACTGCTC 59.345 55.000 0.00 0.00 40.48 4.26
349 356 1.741732 CGGCTTCATTGCTACTGCTCT 60.742 52.381 0.00 0.00 40.48 4.09
350 357 1.669779 GGCTTCATTGCTACTGCTCTG 59.330 52.381 0.00 0.00 40.48 3.35
351 358 2.354259 GCTTCATTGCTACTGCTCTGT 58.646 47.619 0.00 0.00 40.48 3.41
354 361 5.292765 GCTTCATTGCTACTGCTCTGTATA 58.707 41.667 0.00 0.00 40.48 1.47
360 368 3.753797 TGCTACTGCTCTGTATATCTCGG 59.246 47.826 0.00 0.00 40.48 4.63
418 426 2.314323 TCCGTTCTAATAAACCCGCC 57.686 50.000 0.00 0.00 0.00 6.13
447 455 1.678360 GGCGAATTATGCAGCAATCG 58.322 50.000 15.10 15.10 0.00 3.34
505 516 3.528370 CCCGCCCAGAGAGGTACG 61.528 72.222 0.00 0.00 35.47 3.67
506 517 2.754658 CCGCCCAGAGAGGTACGT 60.755 66.667 0.00 0.00 34.28 3.57
507 518 1.452651 CCGCCCAGAGAGGTACGTA 60.453 63.158 0.00 0.00 34.28 3.57
508 519 1.722636 CCGCCCAGAGAGGTACGTAC 61.723 65.000 17.56 17.56 34.28 3.67
586 609 3.190849 CGCAGCATCGTCCTGGTG 61.191 66.667 9.22 9.22 45.23 4.17
588 611 2.046988 CAGCATCGTCCTGGTGCA 60.047 61.111 9.35 0.00 41.19 4.57
589 612 1.450848 CAGCATCGTCCTGGTGCAT 60.451 57.895 9.35 0.00 41.19 3.96
590 613 1.450848 AGCATCGTCCTGGTGCATG 60.451 57.895 9.35 4.05 41.19 4.06
605 628 1.575576 GCATGAGATGGATGCGAGGC 61.576 60.000 0.00 0.00 37.10 4.70
629 652 3.620427 TGTTATGTTACGTGGAGGCAT 57.380 42.857 0.00 0.00 0.00 4.40
631 654 2.502213 TATGTTACGTGGAGGCATCG 57.498 50.000 0.00 0.00 0.00 3.84
651 674 1.807165 CACATGACGGAGAGGTGCG 60.807 63.158 0.00 0.00 44.37 5.34
673 704 0.109039 GTCGGTTGCCAGAGAGAGAC 60.109 60.000 0.00 0.00 0.00 3.36
711 744 1.864862 CTGTGCTTGTTGCGAGAGG 59.135 57.895 0.00 0.00 46.63 3.69
739 772 1.134946 CTGCCGCCATTAAAGAAAGGG 59.865 52.381 0.00 0.00 42.15 3.95
752 788 1.943860 AGAAAGGGAGGAGGAGGAGAT 59.056 52.381 0.00 0.00 0.00 2.75
787 823 4.838486 CCTCGACGCGGCTGTCTC 62.838 72.222 11.76 0.00 36.71 3.36
788 824 3.805307 CTCGACGCGGCTGTCTCT 61.805 66.667 11.76 0.00 36.71 3.10
789 825 3.329688 CTCGACGCGGCTGTCTCTT 62.330 63.158 11.76 0.00 36.71 2.85
790 826 3.175240 CGACGCGGCTGTCTCTTG 61.175 66.667 11.76 0.00 36.71 3.02
791 827 3.482783 GACGCGGCTGTCTCTTGC 61.483 66.667 12.47 0.00 35.95 4.01
813 849 2.438434 GGCCACGATCCCAACAGG 60.438 66.667 0.00 0.00 0.00 4.00
875 911 1.887707 GGATCCGCGGCGAAATTCT 60.888 57.895 25.92 0.85 0.00 2.40
886 922 4.159120 CGGCGAAATTCTTTCTTCTTTCC 58.841 43.478 0.00 0.00 37.52 3.13
891 927 6.374578 CGAAATTCTTTCTTCTTTCCTGTCC 58.625 40.000 0.00 0.00 37.52 4.02
892 928 5.948992 AATTCTTTCTTCTTTCCTGTCCG 57.051 39.130 0.00 0.00 0.00 4.79
895 931 0.320421 TTCTTCTTTCCTGTCCGCGG 60.320 55.000 22.12 22.12 0.00 6.46
911 947 4.783621 GGACAGGGCGATGCTGCA 62.784 66.667 4.13 4.13 36.28 4.41
912 948 2.747460 GACAGGGCGATGCTGCAA 60.747 61.111 6.36 0.00 36.28 4.08
913 949 2.749044 ACAGGGCGATGCTGCAAG 60.749 61.111 6.36 5.19 36.28 4.01
914 950 2.749044 CAGGGCGATGCTGCAAGT 60.749 61.111 6.36 0.00 35.30 3.16
933 969 4.954970 CAACAGCCCACCAGCCGT 62.955 66.667 0.00 0.00 0.00 5.68
960 996 4.704007 GCGTATTTCTCCGCTCGA 57.296 55.556 0.00 0.00 46.08 4.04
961 997 3.180984 GCGTATTTCTCCGCTCGAT 57.819 52.632 0.00 0.00 46.08 3.59
962 998 1.053811 GCGTATTTCTCCGCTCGATC 58.946 55.000 0.00 0.00 46.08 3.69
963 999 1.599667 GCGTATTTCTCCGCTCGATCA 60.600 52.381 0.00 0.00 46.08 2.92
968 1004 2.271944 TTCTCCGCTCGATCATCCTA 57.728 50.000 0.00 0.00 0.00 2.94
989 1025 4.871910 CTAGCTGCTGCCCTGCCC 62.872 72.222 13.43 0.00 40.80 5.36
1044 1083 2.579201 CCGGAGATCACCAGCGTT 59.421 61.111 9.99 0.00 0.00 4.84
1059 1098 1.618640 GCGTTTGCTCTGACTCCGAC 61.619 60.000 0.00 0.00 38.39 4.79
1084 1129 3.356639 GAGCCGTCGCCTGTGATCA 62.357 63.158 0.00 0.00 34.57 2.92
1085 1130 3.188786 GCCGTCGCCTGTGATCAC 61.189 66.667 19.27 19.27 0.00 3.06
1086 1131 2.509336 CCGTCGCCTGTGATCACC 60.509 66.667 22.85 6.94 0.00 4.02
1087 1132 2.261361 CGTCGCCTGTGATCACCA 59.739 61.111 22.85 10.16 0.00 4.17
1088 1133 1.374125 CGTCGCCTGTGATCACCAA 60.374 57.895 22.85 4.51 0.00 3.67
1089 1134 1.626654 CGTCGCCTGTGATCACCAAC 61.627 60.000 22.85 10.71 0.00 3.77
1090 1135 0.602638 GTCGCCTGTGATCACCAACA 60.603 55.000 22.85 3.44 0.00 3.33
1091 1136 0.320683 TCGCCTGTGATCACCAACAG 60.321 55.000 22.85 13.04 0.00 3.16
1092 1137 1.878775 GCCTGTGATCACCAACAGC 59.121 57.895 22.85 13.80 0.00 4.40
1093 1138 1.915614 GCCTGTGATCACCAACAGCG 61.916 60.000 22.85 8.74 0.00 5.18
1094 1139 1.300971 CCTGTGATCACCAACAGCGG 61.301 60.000 22.85 8.01 0.00 5.52
1095 1140 1.915614 CTGTGATCACCAACAGCGGC 61.916 60.000 22.85 0.00 0.00 6.53
1139 1184 1.524863 CTGGTGTCGAGGGACGTCTT 61.525 60.000 16.46 4.01 46.49 3.01
1152 1197 2.266055 GTCTTGGACGGGCTCCTG 59.734 66.667 0.00 0.00 40.26 3.86
1248 1293 3.844090 GAGGTCCTGCTCCTCGCC 61.844 72.222 0.00 0.00 41.36 5.54
1345 1394 0.033366 ACGGCCAAACCTTGCATTTC 59.967 50.000 2.24 0.00 35.61 2.17
1348 1397 1.139163 GCCAAACCTTGCATTTCGTG 58.861 50.000 0.00 0.00 0.00 4.35
1367 1427 1.066071 TGCATGTGATTTGCAATGGGG 60.066 47.619 0.00 0.00 46.48 4.96
1371 1431 0.108041 GTGATTTGCAATGGGGCAGG 60.108 55.000 0.00 0.00 45.88 4.85
1390 1450 4.521146 CAGGCATGGATTTACTTGTCTCT 58.479 43.478 0.00 0.00 0.00 3.10
1391 1451 4.946157 CAGGCATGGATTTACTTGTCTCTT 59.054 41.667 0.00 0.00 0.00 2.85
1392 1452 5.065731 CAGGCATGGATTTACTTGTCTCTTC 59.934 44.000 0.00 0.00 0.00 2.87
1394 1454 5.649831 GGCATGGATTTACTTGTCTCTTCTT 59.350 40.000 0.00 0.00 0.00 2.52
1395 1455 6.183360 GGCATGGATTTACTTGTCTCTTCTTC 60.183 42.308 0.00 0.00 0.00 2.87
1396 1456 6.183360 GCATGGATTTACTTGTCTCTTCTTCC 60.183 42.308 0.00 0.00 0.00 3.46
1397 1457 5.479306 TGGATTTACTTGTCTCTTCTTCCG 58.521 41.667 0.00 0.00 0.00 4.30
1398 1458 4.870991 GGATTTACTTGTCTCTTCTTCCGG 59.129 45.833 0.00 0.00 0.00 5.14
1399 1459 4.950205 TTTACTTGTCTCTTCTTCCGGT 57.050 40.909 0.00 0.00 0.00 5.28
1423 1483 3.497932 GCTCTGCCGCTGCTTCTG 61.498 66.667 0.70 0.00 38.71 3.02
1425 1485 2.047844 TCTGCCGCTGCTTCTGAC 60.048 61.111 0.70 0.00 38.71 3.51
1426 1486 3.485431 CTGCCGCTGCTTCTGACG 61.485 66.667 0.70 0.00 38.71 4.35
1431 1503 3.832171 GCTGCTTCTGACGCGACG 61.832 66.667 15.93 3.31 0.00 5.12
1449 1528 0.519175 CGTTCGCTTTGGATGCTTCG 60.519 55.000 0.00 0.00 0.00 3.79
1452 1531 1.019278 TCGCTTTGGATGCTTCGTCC 61.019 55.000 0.00 0.00 39.80 4.79
1465 1544 0.387929 TTCGTCCGAGAAGCAACTGT 59.612 50.000 0.00 0.00 0.00 3.55
1466 1545 1.241165 TCGTCCGAGAAGCAACTGTA 58.759 50.000 0.00 0.00 0.00 2.74
1467 1546 1.199327 TCGTCCGAGAAGCAACTGTAG 59.801 52.381 0.00 0.00 0.00 2.74
1468 1547 1.068472 CGTCCGAGAAGCAACTGTAGT 60.068 52.381 0.00 0.00 0.00 2.73
1471 1550 2.029290 TCCGAGAAGCAACTGTAGTTCC 60.029 50.000 0.00 0.00 35.83 3.62
1473 1552 3.246619 CGAGAAGCAACTGTAGTTCCTC 58.753 50.000 0.00 0.16 35.83 3.71
1474 1553 3.591023 GAGAAGCAACTGTAGTTCCTCC 58.409 50.000 0.00 0.00 35.83 4.30
1475 1554 2.972713 AGAAGCAACTGTAGTTCCTCCA 59.027 45.455 0.00 0.00 35.83 3.86
1503 1582 0.173481 TCTGCAGACCGCTGTACATC 59.827 55.000 13.74 0.00 44.17 3.06
1505 1584 1.878522 GCAGACCGCTGTACATCCG 60.879 63.158 0.00 2.36 44.17 4.18
1506 1585 1.878522 CAGACCGCTGTACATCCGC 60.879 63.158 0.00 0.00 37.37 5.54
1507 1586 2.183300 GACCGCTGTACATCCGCA 59.817 61.111 0.00 0.00 0.00 5.69
1508 1587 1.227263 GACCGCTGTACATCCGCAT 60.227 57.895 0.00 0.00 0.00 4.73
1509 1588 1.490693 GACCGCTGTACATCCGCATG 61.491 60.000 0.00 0.00 35.92 4.06
1510 1589 1.521457 CCGCTGTACATCCGCATGT 60.521 57.895 0.00 0.00 45.73 3.21
1511 1590 0.249280 CCGCTGTACATCCGCATGTA 60.249 55.000 0.00 0.00 41.81 2.29
1512 1591 1.131771 CGCTGTACATCCGCATGTAG 58.868 55.000 0.00 0.00 44.61 2.74
1513 1592 0.861837 GCTGTACATCCGCATGTAGC 59.138 55.000 0.00 0.00 44.61 3.58
1514 1593 1.806247 GCTGTACATCCGCATGTAGCA 60.806 52.381 8.97 5.72 44.61 3.49
1515 1594 2.759191 CTGTACATCCGCATGTAGCAT 58.241 47.619 0.00 0.00 44.61 3.79
1516 1595 3.860754 GCTGTACATCCGCATGTAGCATA 60.861 47.826 8.97 0.00 44.61 3.14
1517 1596 3.649073 TGTACATCCGCATGTAGCATAC 58.351 45.455 0.00 0.00 44.61 2.39
1518 1597 1.783284 ACATCCGCATGTAGCATACG 58.217 50.000 0.00 0.00 46.99 3.06
1519 1598 1.339929 ACATCCGCATGTAGCATACGA 59.660 47.619 0.00 0.00 46.99 3.43
1520 1599 2.029020 ACATCCGCATGTAGCATACGAT 60.029 45.455 0.00 0.00 46.99 3.73
1528 1607 4.027050 GCATGTAGCATACGATGATGATCG 60.027 45.833 13.25 13.25 46.99 3.69
1550 1629 2.609747 AGACCAACCAGTAGCAAGAGA 58.390 47.619 0.00 0.00 0.00 3.10
1553 1632 1.002430 CCAACCAGTAGCAAGAGAGCA 59.998 52.381 0.00 0.00 36.85 4.26
1559 1638 4.020218 ACCAGTAGCAAGAGAGCATGTAAA 60.020 41.667 0.00 0.00 36.85 2.01
1560 1639 5.121811 CCAGTAGCAAGAGAGCATGTAAAT 58.878 41.667 0.00 0.00 36.85 1.40
1561 1640 6.127054 ACCAGTAGCAAGAGAGCATGTAAATA 60.127 38.462 0.00 0.00 36.85 1.40
1562 1641 6.201806 CCAGTAGCAAGAGAGCATGTAAATAC 59.798 42.308 0.00 0.00 36.85 1.89
1575 1654 5.516339 GCATGTAAATACGTACGTGGTTACT 59.484 40.000 32.80 23.75 40.10 2.24
1576 1655 6.291269 GCATGTAAATACGTACGTGGTTACTC 60.291 42.308 32.80 24.53 40.10 2.59
1578 1657 6.314018 TGTAAATACGTACGTGGTTACTCTG 58.686 40.000 32.80 6.17 33.60 3.35
1581 1660 1.334054 CGTACGTGGTTACTCTGCAC 58.666 55.000 7.22 0.00 0.00 4.57
1582 1661 1.068748 CGTACGTGGTTACTCTGCACT 60.069 52.381 7.22 0.00 0.00 4.40
1583 1662 2.325761 GTACGTGGTTACTCTGCACTG 58.674 52.381 0.00 0.00 0.00 3.66
1584 1663 0.750850 ACGTGGTTACTCTGCACTGT 59.249 50.000 0.00 0.00 0.00 3.55
1585 1664 1.139989 CGTGGTTACTCTGCACTGTG 58.860 55.000 2.76 2.76 0.00 3.66
1614 1693 0.748005 GTGGTTGGTGATGATCCCGG 60.748 60.000 0.00 0.00 0.00 5.73
1668 1750 7.271511 ACAGGATTCTTCTGATGATTGTACTC 58.728 38.462 0.00 0.00 36.22 2.59
1689 1771 3.886505 TCTTGTGGTTGGTAATGTTCCAC 59.113 43.478 5.80 5.80 45.83 4.02
1710 1792 2.245096 GCGATGTTTGTTCATGTGCTC 58.755 47.619 0.00 0.00 0.00 4.26
1713 1795 4.641954 CGATGTTTGTTCATGTGCTCTAC 58.358 43.478 0.00 0.00 0.00 2.59
1717 1799 5.804639 TGTTTGTTCATGTGCTCTACCTAT 58.195 37.500 0.00 0.00 0.00 2.57
1718 1800 6.941857 TGTTTGTTCATGTGCTCTACCTATA 58.058 36.000 0.00 0.00 0.00 1.31
1719 1801 6.816640 TGTTTGTTCATGTGCTCTACCTATAC 59.183 38.462 0.00 0.00 0.00 1.47
1720 1802 5.531122 TGTTCATGTGCTCTACCTATACC 57.469 43.478 0.00 0.00 0.00 2.73
1721 1803 5.208890 TGTTCATGTGCTCTACCTATACCT 58.791 41.667 0.00 0.00 0.00 3.08
1722 1804 6.370453 TGTTCATGTGCTCTACCTATACCTA 58.630 40.000 0.00 0.00 0.00 3.08
1723 1805 6.264744 TGTTCATGTGCTCTACCTATACCTAC 59.735 42.308 0.00 0.00 0.00 3.18
1724 1806 6.202202 TCATGTGCTCTACCTATACCTACT 57.798 41.667 0.00 0.00 0.00 2.57
1725 1807 6.004574 TCATGTGCTCTACCTATACCTACTG 58.995 44.000 0.00 0.00 0.00 2.74
1726 1808 5.641789 TGTGCTCTACCTATACCTACTGA 57.358 43.478 0.00 0.00 0.00 3.41
1727 1809 6.202202 TGTGCTCTACCTATACCTACTGAT 57.798 41.667 0.00 0.00 0.00 2.90
1728 1810 6.611785 TGTGCTCTACCTATACCTACTGATT 58.388 40.000 0.00 0.00 0.00 2.57
1729 1811 7.067421 TGTGCTCTACCTATACCTACTGATTT 58.933 38.462 0.00 0.00 0.00 2.17
1730 1812 7.014326 TGTGCTCTACCTATACCTACTGATTTG 59.986 40.741 0.00 0.00 0.00 2.32
1731 1813 7.230913 GTGCTCTACCTATACCTACTGATTTGA 59.769 40.741 0.00 0.00 0.00 2.69
1732 1814 7.448777 TGCTCTACCTATACCTACTGATTTGAG 59.551 40.741 0.00 0.00 0.00 3.02
1733 1815 7.666388 GCTCTACCTATACCTACTGATTTGAGA 59.334 40.741 0.00 0.00 0.00 3.27
1734 1816 8.921353 TCTACCTATACCTACTGATTTGAGAC 57.079 38.462 0.00 0.00 0.00 3.36
1773 1861 1.282248 CGTGCCTCGTTGTACTGGTG 61.282 60.000 0.00 0.00 34.52 4.17
1777 1865 0.246635 CCTCGTTGTACTGGTGGAGG 59.753 60.000 0.00 0.00 35.56 4.30
1785 1873 4.884668 TGTACTGGTGGAGGAAAGTAAG 57.115 45.455 0.00 0.00 0.00 2.34
1787 1875 2.702748 ACTGGTGGAGGAAAGTAAGGT 58.297 47.619 0.00 0.00 0.00 3.50
1788 1876 2.372172 ACTGGTGGAGGAAAGTAAGGTG 59.628 50.000 0.00 0.00 0.00 4.00
1790 1878 1.982958 GGTGGAGGAAAGTAAGGTGGA 59.017 52.381 0.00 0.00 0.00 4.02
1791 1879 2.290134 GGTGGAGGAAAGTAAGGTGGAC 60.290 54.545 0.00 0.00 0.00 4.02
1826 1914 2.655044 GCAGCGCGCAACAAAAGT 60.655 55.556 35.10 6.63 41.79 2.66
1827 1915 2.230264 GCAGCGCGCAACAAAAGTT 61.230 52.632 35.10 5.73 41.79 2.66
1828 1916 1.751536 GCAGCGCGCAACAAAAGTTT 61.752 50.000 35.10 4.83 41.79 2.66
1829 1917 0.226984 CAGCGCGCAACAAAAGTTTC 59.773 50.000 35.10 0.00 0.00 2.78
1830 1918 0.179150 AGCGCGCAACAAAAGTTTCA 60.179 45.000 35.10 0.00 0.00 2.69
1831 1919 0.852136 GCGCGCAACAAAAGTTTCAT 59.148 45.000 29.10 0.00 0.00 2.57
1832 1920 1.136911 GCGCGCAACAAAAGTTTCATC 60.137 47.619 29.10 0.00 0.00 2.92
1833 1921 2.384382 CGCGCAACAAAAGTTTCATCT 58.616 42.857 8.75 0.00 0.00 2.90
1834 1922 2.788786 CGCGCAACAAAAGTTTCATCTT 59.211 40.909 8.75 0.00 0.00 2.40
1835 1923 3.242712 CGCGCAACAAAAGTTTCATCTTT 59.757 39.130 8.75 0.00 39.00 2.52
1836 1924 4.259770 CGCGCAACAAAAGTTTCATCTTTT 60.260 37.500 8.75 0.00 44.95 2.27
1837 1925 5.559227 GCGCAACAAAAGTTTCATCTTTTT 58.441 33.333 0.30 0.00 43.09 1.94
1904 1993 4.281688 AGGAATAATGCATTGTGGGTATGC 59.718 41.667 22.27 4.68 46.63 3.14
1966 2055 2.674357 TGACAGCACATTGACATGATCG 59.326 45.455 0.00 0.00 34.11 3.69
1973 2062 4.208047 GCACATTGACATGATCGTCTCTAC 59.792 45.833 0.00 0.00 36.82 2.59
2013 2102 5.237815 TGCAAGACAGACAAATTAGATCGT 58.762 37.500 0.00 0.00 0.00 3.73
2015 2104 5.220491 GCAAGACAGACAAATTAGATCGTCC 60.220 44.000 0.00 0.00 0.00 4.79
2025 2114 7.112779 ACAAATTAGATCGTCCTTCATTCCTT 58.887 34.615 0.00 0.00 0.00 3.36
2072 2165 9.952030 ATAAATCTCCTATTAGCCTAAAGAAGC 57.048 33.333 0.00 0.00 0.00 3.86
2073 2166 7.380423 AATCTCCTATTAGCCTAAAGAAGCA 57.620 36.000 0.00 0.00 0.00 3.91
2074 2167 6.412362 TCTCCTATTAGCCTAAAGAAGCAG 57.588 41.667 0.00 0.00 0.00 4.24
2075 2168 4.962155 TCCTATTAGCCTAAAGAAGCAGC 58.038 43.478 0.00 0.00 0.00 5.25
2076 2169 4.656112 TCCTATTAGCCTAAAGAAGCAGCT 59.344 41.667 0.00 0.00 37.58 4.24
2077 2170 5.839063 TCCTATTAGCCTAAAGAAGCAGCTA 59.161 40.000 0.00 0.00 35.03 3.32
2078 2171 6.326583 TCCTATTAGCCTAAAGAAGCAGCTAA 59.673 38.462 0.00 5.34 46.64 3.09
2095 2188 4.635961 GCTAATGCTTTCAAACAACAGC 57.364 40.909 0.00 0.00 36.03 4.40
2096 2189 3.429881 GCTAATGCTTTCAAACAACAGCC 59.570 43.478 0.00 0.00 36.03 4.85
2097 2190 3.540314 AATGCTTTCAAACAACAGCCA 57.460 38.095 0.00 0.00 0.00 4.75
2098 2191 2.292103 TGCTTTCAAACAACAGCCAC 57.708 45.000 0.00 0.00 0.00 5.01
2099 2192 1.134848 TGCTTTCAAACAACAGCCACC 60.135 47.619 0.00 0.00 0.00 4.61
2100 2193 1.134848 GCTTTCAAACAACAGCCACCA 60.135 47.619 0.00 0.00 0.00 4.17
2101 2194 2.676463 GCTTTCAAACAACAGCCACCAA 60.676 45.455 0.00 0.00 0.00 3.67
2102 2195 2.957491 TTCAAACAACAGCCACCAAG 57.043 45.000 0.00 0.00 0.00 3.61
2103 2196 2.136298 TCAAACAACAGCCACCAAGA 57.864 45.000 0.00 0.00 0.00 3.02
2104 2197 2.451490 TCAAACAACAGCCACCAAGAA 58.549 42.857 0.00 0.00 0.00 2.52
2105 2198 2.828520 TCAAACAACAGCCACCAAGAAA 59.171 40.909 0.00 0.00 0.00 2.52
2106 2199 3.450457 TCAAACAACAGCCACCAAGAAAT 59.550 39.130 0.00 0.00 0.00 2.17
2107 2200 3.457610 AACAACAGCCACCAAGAAATG 57.542 42.857 0.00 0.00 0.00 2.32
2118 2211 1.915141 CAAGAAATGGAGCACTGGGT 58.085 50.000 0.00 0.00 0.00 4.51
2119 2212 2.242043 CAAGAAATGGAGCACTGGGTT 58.758 47.619 0.00 0.00 0.00 4.11
2120 2213 3.420893 CAAGAAATGGAGCACTGGGTTA 58.579 45.455 0.00 0.00 0.00 2.85
2121 2214 4.019174 CAAGAAATGGAGCACTGGGTTAT 58.981 43.478 0.00 0.00 0.00 1.89
2122 2215 3.624777 AGAAATGGAGCACTGGGTTATG 58.375 45.455 0.00 0.00 0.00 1.90
2123 2216 1.767759 AATGGAGCACTGGGTTATGC 58.232 50.000 0.00 0.00 42.39 3.14
2124 2217 0.106519 ATGGAGCACTGGGTTATGCC 60.107 55.000 0.00 0.00 43.12 4.40
2125 2218 1.819632 GGAGCACTGGGTTATGCCG 60.820 63.158 0.00 0.00 43.12 5.69
2126 2219 1.220749 GAGCACTGGGTTATGCCGA 59.779 57.895 0.00 0.00 43.12 5.54
2127 2220 1.078426 AGCACTGGGTTATGCCGAC 60.078 57.895 0.00 0.00 43.12 4.79
2128 2221 1.376683 GCACTGGGTTATGCCGACA 60.377 57.895 0.00 0.00 38.44 4.35
2129 2222 1.644786 GCACTGGGTTATGCCGACAC 61.645 60.000 0.00 0.00 38.44 3.67
2130 2223 0.321210 CACTGGGTTATGCCGACACA 60.321 55.000 0.00 0.00 38.44 3.72
2131 2224 2.767536 CTGGGTTATGCCGACACAG 58.232 57.895 0.00 0.00 41.64 3.66
2132 2225 0.744414 CTGGGTTATGCCGACACAGG 60.744 60.000 5.76 0.00 43.25 4.00
2133 2226 1.195442 TGGGTTATGCCGACACAGGA 61.195 55.000 0.00 0.00 38.44 3.86
2134 2227 0.462047 GGGTTATGCCGACACAGGAG 60.462 60.000 0.00 0.00 38.44 3.69
2135 2228 1.090052 GGTTATGCCGACACAGGAGC 61.090 60.000 0.00 0.00 0.00 4.70
2136 2229 0.391130 GTTATGCCGACACAGGAGCA 60.391 55.000 0.00 0.00 40.00 4.26
2137 2230 0.108186 TTATGCCGACACAGGAGCAG 60.108 55.000 0.00 0.00 38.89 4.24
2138 2231 2.578163 TATGCCGACACAGGAGCAGC 62.578 60.000 0.00 0.00 38.89 5.25
2139 2232 4.385405 GCCGACACAGGAGCAGCT 62.385 66.667 0.00 0.00 0.00 4.24
2140 2233 2.345244 CCGACACAGGAGCAGCTT 59.655 61.111 0.00 0.00 0.00 3.74
2141 2234 1.302033 CCGACACAGGAGCAGCTTT 60.302 57.895 0.00 0.00 0.00 3.51
2142 2235 0.037326 CCGACACAGGAGCAGCTTTA 60.037 55.000 0.00 0.00 0.00 1.85
2143 2236 1.406069 CCGACACAGGAGCAGCTTTAT 60.406 52.381 0.00 0.00 0.00 1.40
2144 2237 2.159099 CCGACACAGGAGCAGCTTTATA 60.159 50.000 0.00 0.00 0.00 0.98
2145 2238 3.521560 CGACACAGGAGCAGCTTTATAA 58.478 45.455 0.00 0.00 0.00 0.98
2146 2239 3.932710 CGACACAGGAGCAGCTTTATAAA 59.067 43.478 0.00 0.00 0.00 1.40
2147 2240 4.391830 CGACACAGGAGCAGCTTTATAAAA 59.608 41.667 0.00 0.00 0.00 1.52
2148 2241 5.629079 ACACAGGAGCAGCTTTATAAAAC 57.371 39.130 0.00 0.00 0.00 2.43
2149 2242 5.070001 ACACAGGAGCAGCTTTATAAAACA 58.930 37.500 0.00 0.00 0.00 2.83
2150 2243 5.048713 ACACAGGAGCAGCTTTATAAAACAC 60.049 40.000 0.00 0.00 0.00 3.32
2151 2244 5.048782 CACAGGAGCAGCTTTATAAAACACA 60.049 40.000 0.00 0.00 0.00 3.72
2152 2245 5.182001 ACAGGAGCAGCTTTATAAAACACAG 59.818 40.000 0.00 0.00 0.00 3.66
2153 2246 5.182001 CAGGAGCAGCTTTATAAAACACAGT 59.818 40.000 0.00 0.00 0.00 3.55
2154 2247 6.371548 CAGGAGCAGCTTTATAAAACACAGTA 59.628 38.462 0.00 0.00 0.00 2.74
2155 2248 6.595716 AGGAGCAGCTTTATAAAACACAGTAG 59.404 38.462 0.00 0.00 0.00 2.57
2156 2249 6.183360 GGAGCAGCTTTATAAAACACAGTAGG 60.183 42.308 0.00 0.00 0.00 3.18
2157 2250 5.648092 AGCAGCTTTATAAAACACAGTAGGG 59.352 40.000 0.00 0.00 0.00 3.53
2158 2251 5.646360 GCAGCTTTATAAAACACAGTAGGGA 59.354 40.000 0.00 0.00 0.00 4.20
2159 2252 6.150474 GCAGCTTTATAAAACACAGTAGGGAA 59.850 38.462 0.00 0.00 0.00 3.97
2160 2253 7.308951 GCAGCTTTATAAAACACAGTAGGGAAA 60.309 37.037 0.00 0.00 0.00 3.13
2161 2254 8.021396 CAGCTTTATAAAACACAGTAGGGAAAC 58.979 37.037 0.00 0.00 0.00 2.78
2177 2270 4.342352 GGAAACCTCATTTGATCACGAC 57.658 45.455 0.00 0.00 0.00 4.34
2178 2271 3.751175 GGAAACCTCATTTGATCACGACA 59.249 43.478 0.00 0.00 0.00 4.35
2179 2272 4.142816 GGAAACCTCATTTGATCACGACAG 60.143 45.833 0.00 0.00 0.00 3.51
2180 2273 3.685139 ACCTCATTTGATCACGACAGT 57.315 42.857 0.00 0.00 0.00 3.55
2181 2274 4.801330 ACCTCATTTGATCACGACAGTA 57.199 40.909 0.00 0.00 0.00 2.74
2182 2275 5.147330 ACCTCATTTGATCACGACAGTAA 57.853 39.130 0.00 0.00 0.00 2.24
2183 2276 5.547465 ACCTCATTTGATCACGACAGTAAA 58.453 37.500 0.00 0.00 0.00 2.01
2184 2277 5.995282 ACCTCATTTGATCACGACAGTAAAA 59.005 36.000 0.00 0.00 0.00 1.52
2185 2278 6.655003 ACCTCATTTGATCACGACAGTAAAAT 59.345 34.615 0.00 0.00 0.00 1.82
2186 2279 7.148407 ACCTCATTTGATCACGACAGTAAAATC 60.148 37.037 0.00 0.00 0.00 2.17
2187 2280 7.148423 CCTCATTTGATCACGACAGTAAAATCA 60.148 37.037 0.00 0.00 0.00 2.57
2188 2281 7.518161 TCATTTGATCACGACAGTAAAATCAC 58.482 34.615 0.00 0.00 0.00 3.06
2189 2282 6.852858 TTTGATCACGACAGTAAAATCACA 57.147 33.333 0.00 0.00 0.00 3.58
2190 2283 6.466308 TTGATCACGACAGTAAAATCACAG 57.534 37.500 0.00 0.00 0.00 3.66
2191 2284 4.929211 TGATCACGACAGTAAAATCACAGG 59.071 41.667 0.00 0.00 0.00 4.00
2192 2285 3.064207 TCACGACAGTAAAATCACAGGC 58.936 45.455 0.00 0.00 0.00 4.85
2193 2286 3.067106 CACGACAGTAAAATCACAGGCT 58.933 45.455 0.00 0.00 0.00 4.58
2194 2287 4.021807 TCACGACAGTAAAATCACAGGCTA 60.022 41.667 0.00 0.00 0.00 3.93
2195 2288 4.091509 CACGACAGTAAAATCACAGGCTAC 59.908 45.833 0.00 0.00 0.00 3.58
2196 2289 4.242475 CGACAGTAAAATCACAGGCTACA 58.758 43.478 0.00 0.00 0.00 2.74
2197 2290 4.327357 CGACAGTAAAATCACAGGCTACAG 59.673 45.833 0.00 0.00 0.00 2.74
2198 2291 4.579869 ACAGTAAAATCACAGGCTACAGG 58.420 43.478 0.00 0.00 0.00 4.00
2199 2292 4.286032 ACAGTAAAATCACAGGCTACAGGA 59.714 41.667 0.00 0.00 0.00 3.86
2200 2293 5.045578 ACAGTAAAATCACAGGCTACAGGAT 60.046 40.000 0.00 0.00 0.00 3.24
2201 2294 5.525378 CAGTAAAATCACAGGCTACAGGATC 59.475 44.000 0.00 0.00 0.00 3.36
2202 2295 2.898729 AATCACAGGCTACAGGATCG 57.101 50.000 0.00 0.00 0.00 3.69
2203 2296 0.390860 ATCACAGGCTACAGGATCGC 59.609 55.000 0.00 0.00 0.00 4.58
2204 2297 1.227380 CACAGGCTACAGGATCGCC 60.227 63.158 0.63 0.63 44.09 5.54
2205 2298 1.685765 ACAGGCTACAGGATCGCCA 60.686 57.895 10.66 0.00 46.14 5.69
2206 2299 1.264749 ACAGGCTACAGGATCGCCAA 61.265 55.000 10.66 0.00 46.14 4.52
2207 2300 0.107456 CAGGCTACAGGATCGCCAAT 59.893 55.000 10.66 0.00 46.14 3.16
2208 2301 0.839946 AGGCTACAGGATCGCCAATT 59.160 50.000 10.66 0.00 46.14 2.32
2209 2302 1.212935 AGGCTACAGGATCGCCAATTT 59.787 47.619 10.66 0.00 46.14 1.82
2210 2303 2.438021 AGGCTACAGGATCGCCAATTTA 59.562 45.455 10.66 0.00 46.14 1.40
2211 2304 2.808543 GGCTACAGGATCGCCAATTTAG 59.191 50.000 3.92 0.00 43.25 1.85
2212 2305 2.808543 GCTACAGGATCGCCAATTTAGG 59.191 50.000 0.00 0.00 36.29 2.69
2213 2306 3.494398 GCTACAGGATCGCCAATTTAGGA 60.494 47.826 0.00 0.00 36.29 2.94
2214 2307 3.199880 ACAGGATCGCCAATTTAGGAG 57.800 47.619 0.00 0.00 36.29 3.69
2215 2308 2.505819 ACAGGATCGCCAATTTAGGAGT 59.494 45.455 0.00 0.00 36.29 3.85
2216 2309 3.709653 ACAGGATCGCCAATTTAGGAGTA 59.290 43.478 0.00 0.00 36.29 2.59
2217 2310 4.058817 CAGGATCGCCAATTTAGGAGTAC 58.941 47.826 0.00 0.00 36.29 2.73
2218 2311 3.709653 AGGATCGCCAATTTAGGAGTACA 59.290 43.478 0.00 0.00 36.29 2.90
2219 2312 3.808174 GGATCGCCAATTTAGGAGTACAC 59.192 47.826 0.00 0.00 0.00 2.90
2220 2313 3.965379 TCGCCAATTTAGGAGTACACA 57.035 42.857 0.00 0.00 0.00 3.72
2221 2314 3.592059 TCGCCAATTTAGGAGTACACAC 58.408 45.455 0.00 0.00 0.00 3.82
2222 2315 3.007074 TCGCCAATTTAGGAGTACACACA 59.993 43.478 0.00 0.00 0.00 3.72
2223 2316 3.749088 CGCCAATTTAGGAGTACACACAA 59.251 43.478 0.00 0.00 0.00 3.33
2224 2317 4.378046 CGCCAATTTAGGAGTACACACAAC 60.378 45.833 0.00 0.00 0.00 3.32
2225 2318 4.517453 GCCAATTTAGGAGTACACACAACA 59.483 41.667 0.00 0.00 0.00 3.33
2226 2319 5.009210 GCCAATTTAGGAGTACACACAACAA 59.991 40.000 0.00 0.00 0.00 2.83
2227 2320 6.668323 CCAATTTAGGAGTACACACAACAAG 58.332 40.000 0.00 0.00 0.00 3.16
2228 2321 6.293955 CCAATTTAGGAGTACACACAACAAGG 60.294 42.308 0.00 0.00 0.00 3.61
2229 2322 5.362105 TTTAGGAGTACACACAACAAGGT 57.638 39.130 0.00 0.00 0.00 3.50
2230 2323 3.470645 AGGAGTACACACAACAAGGTC 57.529 47.619 0.00 0.00 0.00 3.85
2231 2324 2.132762 GGAGTACACACAACAAGGTCG 58.867 52.381 0.00 0.00 0.00 4.79
2232 2325 2.223876 GGAGTACACACAACAAGGTCGA 60.224 50.000 0.00 0.00 0.00 4.20
2233 2326 3.450578 GAGTACACACAACAAGGTCGAA 58.549 45.455 0.00 0.00 0.00 3.71
2234 2327 4.056050 GAGTACACACAACAAGGTCGAAT 58.944 43.478 0.00 0.00 0.00 3.34
2235 2328 4.056050 AGTACACACAACAAGGTCGAATC 58.944 43.478 0.00 0.00 0.00 2.52
2236 2329 1.864711 ACACACAACAAGGTCGAATCG 59.135 47.619 0.00 0.00 0.00 3.34
2237 2330 1.864711 CACACAACAAGGTCGAATCGT 59.135 47.619 1.52 0.00 0.00 3.73
2238 2331 3.054166 CACACAACAAGGTCGAATCGTA 58.946 45.455 1.52 0.00 0.00 3.43
2239 2332 3.491639 CACACAACAAGGTCGAATCGTAA 59.508 43.478 1.52 0.00 0.00 3.18
2240 2333 4.025563 CACACAACAAGGTCGAATCGTAAA 60.026 41.667 1.52 0.00 0.00 2.01
2241 2334 4.571580 ACACAACAAGGTCGAATCGTAAAA 59.428 37.500 1.52 0.00 0.00 1.52
2242 2335 4.901881 CACAACAAGGTCGAATCGTAAAAC 59.098 41.667 1.52 0.00 0.00 2.43
2243 2336 4.571580 ACAACAAGGTCGAATCGTAAAACA 59.428 37.500 1.52 0.00 0.00 2.83
2244 2337 5.064962 ACAACAAGGTCGAATCGTAAAACAA 59.935 36.000 1.52 0.00 0.00 2.83
2245 2338 5.738118 ACAAGGTCGAATCGTAAAACAAA 57.262 34.783 1.52 0.00 0.00 2.83
2246 2339 5.744490 ACAAGGTCGAATCGTAAAACAAAG 58.256 37.500 1.52 0.00 0.00 2.77
2247 2340 5.524646 ACAAGGTCGAATCGTAAAACAAAGA 59.475 36.000 1.52 0.00 0.00 2.52
2248 2341 6.037391 ACAAGGTCGAATCGTAAAACAAAGAA 59.963 34.615 1.52 0.00 0.00 2.52
2249 2342 6.224420 AGGTCGAATCGTAAAACAAAGAAG 57.776 37.500 1.52 0.00 0.00 2.85
2250 2343 5.178809 AGGTCGAATCGTAAAACAAAGAAGG 59.821 40.000 1.52 0.00 0.00 3.46
2251 2344 4.844522 GTCGAATCGTAAAACAAAGAAGGC 59.155 41.667 1.52 0.00 0.00 4.35
2252 2345 4.512198 TCGAATCGTAAAACAAAGAAGGCA 59.488 37.500 1.52 0.00 0.00 4.75
2253 2346 4.611366 CGAATCGTAAAACAAAGAAGGCAC 59.389 41.667 0.00 0.00 0.00 5.01
2254 2347 3.595709 TCGTAAAACAAAGAAGGCACG 57.404 42.857 0.00 0.00 0.00 5.34
2255 2348 2.288458 TCGTAAAACAAAGAAGGCACGG 59.712 45.455 0.00 0.00 0.00 4.94
2256 2349 2.603652 CGTAAAACAAAGAAGGCACGGG 60.604 50.000 0.00 0.00 0.00 5.28
2257 2350 0.104120 AAAACAAAGAAGGCACGGGC 59.896 50.000 0.00 0.00 40.13 6.13
2258 2351 2.070654 AAACAAAGAAGGCACGGGCG 62.071 55.000 2.17 0.00 42.47 6.13
2259 2352 4.404654 CAAAGAAGGCACGGGCGC 62.405 66.667 2.17 0.00 42.47 6.53
2273 2366 2.258286 GCGCGGCCAACAGAATTT 59.742 55.556 8.83 0.00 0.00 1.82
2274 2367 1.504446 GCGCGGCCAACAGAATTTA 59.496 52.632 8.83 0.00 0.00 1.40
2275 2368 0.109504 GCGCGGCCAACAGAATTTAA 60.110 50.000 8.83 0.00 0.00 1.52
2276 2369 1.667467 GCGCGGCCAACAGAATTTAAA 60.667 47.619 8.83 0.00 0.00 1.52
2277 2370 2.667137 CGCGGCCAACAGAATTTAAAA 58.333 42.857 2.24 0.00 0.00 1.52
2278 2371 2.661195 CGCGGCCAACAGAATTTAAAAG 59.339 45.455 2.24 0.00 0.00 2.27
2279 2372 2.993220 GCGGCCAACAGAATTTAAAAGG 59.007 45.455 2.24 0.00 0.00 3.11
2280 2373 3.305744 GCGGCCAACAGAATTTAAAAGGA 60.306 43.478 2.24 0.00 0.00 3.36
2281 2374 4.797933 GCGGCCAACAGAATTTAAAAGGAA 60.798 41.667 2.24 0.00 0.00 3.36
2282 2375 5.478407 CGGCCAACAGAATTTAAAAGGAAT 58.522 37.500 2.24 0.00 0.00 3.01
2283 2376 6.626302 CGGCCAACAGAATTTAAAAGGAATA 58.374 36.000 2.24 0.00 0.00 1.75
2284 2377 6.751888 CGGCCAACAGAATTTAAAAGGAATAG 59.248 38.462 2.24 0.00 0.00 1.73
2285 2378 6.535150 GGCCAACAGAATTTAAAAGGAATAGC 59.465 38.462 0.00 0.00 0.00 2.97
2286 2379 7.323420 GCCAACAGAATTTAAAAGGAATAGCT 58.677 34.615 0.00 0.00 0.00 3.32
2287 2380 7.276438 GCCAACAGAATTTAAAAGGAATAGCTG 59.724 37.037 0.00 0.00 0.00 4.24
2288 2381 7.276438 CCAACAGAATTTAAAAGGAATAGCTGC 59.724 37.037 0.00 0.00 0.00 5.25
2289 2382 7.709149 ACAGAATTTAAAAGGAATAGCTGCT 57.291 32.000 7.57 7.57 0.00 4.24
2290 2383 8.807948 ACAGAATTTAAAAGGAATAGCTGCTA 57.192 30.769 12.40 12.40 0.00 3.49
2291 2384 9.413734 ACAGAATTTAAAAGGAATAGCTGCTAT 57.586 29.630 16.19 16.19 0.00 2.97
2297 2390 8.904099 TTAAAAGGAATAGCTGCTATTACTCC 57.096 34.615 35.37 28.87 44.23 3.85
2298 2391 5.491323 AAGGAATAGCTGCTATTACTCCC 57.509 43.478 35.37 28.08 44.23 4.30
2299 2392 4.757692 AGGAATAGCTGCTATTACTCCCT 58.242 43.478 32.02 27.72 42.12 4.20
2300 2393 4.775253 AGGAATAGCTGCTATTACTCCCTC 59.225 45.833 32.02 19.43 42.12 4.30
2301 2394 4.081365 GGAATAGCTGCTATTACTCCCTCC 60.081 50.000 29.10 21.86 36.87 4.30
2302 2395 1.333177 AGCTGCTATTACTCCCTCCG 58.667 55.000 0.00 0.00 0.00 4.63
2303 2396 1.041437 GCTGCTATTACTCCCTCCGT 58.959 55.000 0.00 0.00 0.00 4.69
2304 2397 1.413077 GCTGCTATTACTCCCTCCGTT 59.587 52.381 0.00 0.00 0.00 4.44
2305 2398 2.158943 GCTGCTATTACTCCCTCCGTTT 60.159 50.000 0.00 0.00 0.00 3.60
2306 2399 3.718815 CTGCTATTACTCCCTCCGTTTC 58.281 50.000 0.00 0.00 0.00 2.78
2307 2400 3.101437 TGCTATTACTCCCTCCGTTTCA 58.899 45.455 0.00 0.00 0.00 2.69
2308 2401 3.709653 TGCTATTACTCCCTCCGTTTCAT 59.290 43.478 0.00 0.00 0.00 2.57
2309 2402 4.897076 TGCTATTACTCCCTCCGTTTCATA 59.103 41.667 0.00 0.00 0.00 2.15
2310 2403 5.542635 TGCTATTACTCCCTCCGTTTCATAT 59.457 40.000 0.00 0.00 0.00 1.78
2311 2404 6.042781 TGCTATTACTCCCTCCGTTTCATATT 59.957 38.462 0.00 0.00 0.00 1.28
2312 2405 7.233962 TGCTATTACTCCCTCCGTTTCATATTA 59.766 37.037 0.00 0.00 0.00 0.98
2313 2406 7.544915 GCTATTACTCCCTCCGTTTCATATTAC 59.455 40.741 0.00 0.00 0.00 1.89
2314 2407 7.613551 ATTACTCCCTCCGTTTCATATTACT 57.386 36.000 0.00 0.00 0.00 2.24
2315 2408 5.952347 ACTCCCTCCGTTTCATATTACTT 57.048 39.130 0.00 0.00 0.00 2.24
2316 2409 5.671493 ACTCCCTCCGTTTCATATTACTTG 58.329 41.667 0.00 0.00 0.00 3.16
2317 2410 5.189145 ACTCCCTCCGTTTCATATTACTTGT 59.811 40.000 0.00 0.00 0.00 3.16
2318 2411 5.667466 TCCCTCCGTTTCATATTACTTGTC 58.333 41.667 0.00 0.00 0.00 3.18
2319 2412 5.188163 TCCCTCCGTTTCATATTACTTGTCA 59.812 40.000 0.00 0.00 0.00 3.58
2320 2413 5.293569 CCCTCCGTTTCATATTACTTGTCAC 59.706 44.000 0.00 0.00 0.00 3.67
2321 2414 5.872617 CCTCCGTTTCATATTACTTGTCACA 59.127 40.000 0.00 0.00 0.00 3.58
2322 2415 6.036083 CCTCCGTTTCATATTACTTGTCACAG 59.964 42.308 0.00 0.00 0.00 3.66
2323 2416 6.693466 TCCGTTTCATATTACTTGTCACAGA 58.307 36.000 0.00 0.00 0.00 3.41
2324 2417 7.156000 TCCGTTTCATATTACTTGTCACAGAA 58.844 34.615 0.00 0.00 0.00 3.02
2325 2418 7.658167 TCCGTTTCATATTACTTGTCACAGAAA 59.342 33.333 0.00 0.00 0.00 2.52
2326 2419 8.450964 CCGTTTCATATTACTTGTCACAGAAAT 58.549 33.333 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.029838 AATCCCATCTGTCAACGCTC 57.970 50.000 0.00 0.00 0.00 5.03
82 83 1.153469 GGCCAAGAGAGAGCTTCCG 60.153 63.158 0.00 0.00 0.00 4.30
87 88 2.125350 CCACGGCCAAGAGAGAGC 60.125 66.667 2.24 0.00 0.00 4.09
99 100 4.742201 CTCACCTCACGGCCACGG 62.742 72.222 2.24 0.00 46.48 4.94
106 107 1.517257 GATCACGCCTCACCTCACG 60.517 63.158 0.00 0.00 0.00 4.35
118 119 0.960364 CAGTTTGGGTGGGGATCACG 60.960 60.000 0.00 0.00 46.96 4.35
168 169 0.764890 GGATTGATCGGGTCCATCCA 59.235 55.000 14.74 0.00 44.69 3.41
259 260 3.357079 CAGGCAACGCTGGGACAC 61.357 66.667 0.00 0.00 46.39 3.67
282 283 2.590007 GGATGCTACCAGCCGCAG 60.590 66.667 0.00 0.00 41.51 5.18
286 287 1.149401 GAAGGGGATGCTACCAGCC 59.851 63.158 0.00 0.00 46.80 4.85
287 288 1.149401 GGAAGGGGATGCTACCAGC 59.851 63.158 2.59 0.00 42.82 4.85
288 289 1.709994 GGGGAAGGGGATGCTACCAG 61.710 65.000 2.59 0.00 0.00 4.00
289 290 1.696314 GGGGAAGGGGATGCTACCA 60.696 63.158 2.59 0.00 0.00 3.25
290 291 2.461739 GGGGGAAGGGGATGCTACC 61.462 68.421 0.00 0.00 0.00 3.18
291 292 1.696314 TGGGGGAAGGGGATGCTAC 60.696 63.158 0.00 0.00 0.00 3.58
292 293 1.696314 GTGGGGGAAGGGGATGCTA 60.696 63.158 0.00 0.00 0.00 3.49
293 294 3.023735 GTGGGGGAAGGGGATGCT 61.024 66.667 0.00 0.00 0.00 3.79
294 295 4.506255 CGTGGGGGAAGGGGATGC 62.506 72.222 0.00 0.00 0.00 3.91
295 296 2.552231 GAACGTGGGGGAAGGGGATG 62.552 65.000 0.00 0.00 0.00 3.51
296 297 2.204244 AACGTGGGGGAAGGGGAT 60.204 61.111 0.00 0.00 0.00 3.85
297 298 2.931649 GAACGTGGGGGAAGGGGA 60.932 66.667 0.00 0.00 0.00 4.81
298 299 4.043100 GGAACGTGGGGGAAGGGG 62.043 72.222 0.00 0.00 0.00 4.79
299 300 1.276140 TATGGAACGTGGGGGAAGGG 61.276 60.000 0.00 0.00 0.00 3.95
300 301 0.107361 GTATGGAACGTGGGGGAAGG 60.107 60.000 0.00 0.00 0.00 3.46
301 302 0.461339 CGTATGGAACGTGGGGGAAG 60.461 60.000 0.00 0.00 46.72 3.46
302 303 1.597989 CGTATGGAACGTGGGGGAA 59.402 57.895 0.00 0.00 46.72 3.97
303 304 3.301070 CGTATGGAACGTGGGGGA 58.699 61.111 0.00 0.00 46.72 4.81
315 316 3.065575 AGCCGAGCTTTTCCGTATG 57.934 52.632 0.00 0.00 33.89 2.39
330 337 1.669779 CAGAGCAGTAGCAATGAAGCC 59.330 52.381 0.00 0.00 45.49 4.35
345 352 2.586900 GTTCGCCGAGATATACAGAGC 58.413 52.381 0.00 0.00 0.00 4.09
347 354 2.486918 TCGTTCGCCGAGATATACAGA 58.513 47.619 0.00 0.00 41.60 3.41
348 355 2.963498 TCGTTCGCCGAGATATACAG 57.037 50.000 0.00 0.00 41.60 2.74
382 390 1.227973 GATCTTGATCCGGCACCCC 60.228 63.158 0.00 0.00 0.00 4.95
383 391 1.227973 GGATCTTGATCCGGCACCC 60.228 63.158 13.16 0.00 0.00 4.61
384 392 4.464262 GGATCTTGATCCGGCACC 57.536 61.111 13.16 0.00 0.00 5.01
405 413 4.805219 GCAATTATGGGCGGGTTTATTAG 58.195 43.478 0.00 0.00 0.00 1.73
407 415 3.744238 GCAATTATGGGCGGGTTTATT 57.256 42.857 0.00 0.00 0.00 1.40
430 438 1.603802 ACCCGATTGCTGCATAATTCG 59.396 47.619 1.84 10.09 0.00 3.34
447 455 2.463047 TTATTGGCAACCCCATACCC 57.537 50.000 0.00 0.00 44.89 3.69
488 499 2.898920 TACGTACCTCTCTGGGCGGG 62.899 65.000 0.00 0.00 40.69 6.13
505 516 2.421168 GCAAAAGATCGTGCTCGTAC 57.579 50.000 8.17 3.95 37.78 3.67
549 560 1.738099 CGCAGAGAAGGTTCCGTGG 60.738 63.158 0.00 0.00 0.00 4.94
586 609 1.575576 GCCTCGCATCCATCTCATGC 61.576 60.000 0.00 0.00 42.84 4.06
588 611 1.126329 AGGCCTCGCATCCATCTCAT 61.126 55.000 0.00 0.00 0.00 2.90
589 612 0.469892 TAGGCCTCGCATCCATCTCA 60.470 55.000 9.68 0.00 0.00 3.27
590 613 0.901124 ATAGGCCTCGCATCCATCTC 59.099 55.000 9.68 0.00 0.00 2.75
605 628 4.056050 GCCTCCACGTAACATAACATAGG 58.944 47.826 0.00 0.00 0.00 2.57
631 654 1.448540 CACCTCTCCGTCATGTGGC 60.449 63.158 0.00 0.00 0.00 5.01
651 674 4.373116 TCTCTGGCAACCGACCGC 62.373 66.667 0.00 0.00 0.00 5.68
663 686 3.801114 TCTCTCTCTCGTCTCTCTCTG 57.199 52.381 0.00 0.00 0.00 3.35
665 688 4.302455 CTGATCTCTCTCTCGTCTCTCTC 58.698 52.174 0.00 0.00 0.00 3.20
673 704 0.041047 CGCAGCTGATCTCTCTCTCG 60.041 60.000 20.43 2.99 0.00 4.04
724 757 3.053619 TCCTCCTCCCTTTCTTTAATGGC 60.054 47.826 0.00 0.00 0.00 4.40
739 772 0.485099 TAGGCCATCTCCTCCTCCTC 59.515 60.000 5.01 0.00 37.66 3.71
795 831 2.819595 CTGTTGGGATCGTGGCCG 60.820 66.667 0.00 0.00 0.00 6.13
806 842 4.410400 GGACCCGCTCCCTGTTGG 62.410 72.222 0.00 0.00 31.83 3.77
807 843 2.690653 TTTGGACCCGCTCCCTGTTG 62.691 60.000 0.00 0.00 38.49 3.33
808 844 2.457323 TTTGGACCCGCTCCCTGTT 61.457 57.895 0.00 0.00 38.49 3.16
809 845 2.852075 TTTGGACCCGCTCCCTGT 60.852 61.111 0.00 0.00 38.49 4.00
813 849 3.952628 CTCGGTTTGGACCCGCTCC 62.953 68.421 0.00 0.00 45.09 4.70
815 851 3.236003 GACTCGGTTTGGACCCGCT 62.236 63.158 0.00 0.00 45.09 5.52
817 853 0.321298 AATGACTCGGTTTGGACCCG 60.321 55.000 0.00 0.00 43.42 5.28
834 870 2.041755 GTGGAGGTTGGAGGGAGAAAAT 59.958 50.000 0.00 0.00 0.00 1.82
875 911 1.508632 CGCGGACAGGAAAGAAGAAA 58.491 50.000 0.00 0.00 0.00 2.52
895 931 2.747460 TTGCAGCATCGCCCTGTC 60.747 61.111 0.00 0.00 32.93 3.51
899 935 4.487412 GCACTTGCAGCATCGCCC 62.487 66.667 0.00 0.00 41.59 6.13
911 947 1.829533 CTGGTGGGCTGTTGCACTT 60.830 57.895 0.00 0.00 44.40 3.16
912 948 2.203394 CTGGTGGGCTGTTGCACT 60.203 61.111 0.00 0.00 44.40 4.40
913 949 3.982241 GCTGGTGGGCTGTTGCAC 61.982 66.667 0.00 0.00 44.33 4.57
933 969 1.519898 GAAATACGCGGCCGGAGAA 60.520 57.895 29.38 8.65 39.22 2.87
947 983 1.967066 AGGATGATCGAGCGGAGAAAT 59.033 47.619 0.00 0.00 0.00 2.17
960 996 3.055240 GCAGCAGCTAGGAATAGGATGAT 60.055 47.826 0.00 0.00 37.91 2.45
961 997 2.301296 GCAGCAGCTAGGAATAGGATGA 59.699 50.000 0.00 0.00 37.91 2.92
962 998 2.614987 GGCAGCAGCTAGGAATAGGATG 60.615 54.545 0.00 0.00 41.70 3.51
963 999 1.627834 GGCAGCAGCTAGGAATAGGAT 59.372 52.381 0.00 0.00 41.70 3.24
968 1004 1.530771 CAGGGCAGCAGCTAGGAAT 59.469 57.895 0.00 0.00 41.70 3.01
1044 1083 1.587043 CGGAGTCGGAGTCAGAGCAA 61.587 60.000 14.42 0.00 0.00 3.91
1152 1197 3.723348 GTGTCCGCGAACTTGCCC 61.723 66.667 8.23 0.00 0.00 5.36
1329 1377 1.139163 CACGAAATGCAAGGTTTGGC 58.861 50.000 0.00 0.00 0.00 4.52
1348 1397 1.658994 CCCCATTGCAAATCACATGC 58.341 50.000 1.71 0.00 44.08 4.06
1349 1398 1.066071 TGCCCCATTGCAAATCACATG 60.066 47.619 1.71 0.00 38.56 3.21
1350 1399 1.208535 CTGCCCCATTGCAAATCACAT 59.791 47.619 1.71 0.00 41.51 3.21
1351 1400 0.609151 CTGCCCCATTGCAAATCACA 59.391 50.000 1.71 0.00 41.51 3.58
1352 1401 0.108041 CCTGCCCCATTGCAAATCAC 60.108 55.000 1.71 0.00 41.51 3.06
1353 1402 1.901654 GCCTGCCCCATTGCAAATCA 61.902 55.000 1.71 0.00 41.51 2.57
1354 1403 1.153309 GCCTGCCCCATTGCAAATC 60.153 57.895 1.71 0.00 41.51 2.17
1357 1417 2.284773 ATGCCTGCCCCATTGCAA 60.285 55.556 0.00 0.00 41.51 4.08
1362 1422 0.562177 TAAATCCATGCCTGCCCCAT 59.438 50.000 0.00 0.00 0.00 4.00
1367 1427 3.019564 AGACAAGTAAATCCATGCCTGC 58.980 45.455 0.00 0.00 0.00 4.85
1371 1431 6.183360 GGAAGAAGAGACAAGTAAATCCATGC 60.183 42.308 0.00 0.00 0.00 4.06
1390 1450 0.391661 GAGCATCTGCACCGGAAGAA 60.392 55.000 9.46 0.00 45.16 2.52
1391 1451 1.219124 GAGCATCTGCACCGGAAGA 59.781 57.895 9.46 8.74 45.16 2.87
1392 1452 3.805267 GAGCATCTGCACCGGAAG 58.195 61.111 9.46 2.31 45.16 3.46
1427 1487 1.225745 GCATCCAAAGCGAACGTCG 60.226 57.895 0.00 0.00 43.89 5.12
1431 1503 0.517316 ACGAAGCATCCAAAGCGAAC 59.483 50.000 0.00 0.00 37.01 3.95
1449 1528 2.726832 ACTACAGTTGCTTCTCGGAC 57.273 50.000 0.00 0.00 0.00 4.79
1465 1544 2.912956 AGAGCAAACCATGGAGGAACTA 59.087 45.455 21.47 0.00 41.55 2.24
1467 1546 1.815003 CAGAGCAAACCATGGAGGAAC 59.185 52.381 21.47 3.49 41.22 3.62
1468 1547 1.887956 GCAGAGCAAACCATGGAGGAA 60.888 52.381 21.47 0.00 41.22 3.36
1471 1550 0.809385 CTGCAGAGCAAACCATGGAG 59.191 55.000 21.47 9.02 38.41 3.86
1473 1552 0.524862 GTCTGCAGAGCAAACCATGG 59.475 55.000 18.89 11.19 38.41 3.66
1493 1572 1.131771 CTACATGCGGATGTACAGCG 58.868 55.000 23.87 11.87 41.27 5.18
1503 1582 2.064573 TCATCGTATGCTACATGCGG 57.935 50.000 16.09 3.73 46.63 5.69
1505 1584 4.027050 CGATCATCATCGTATGCTACATGC 60.027 45.833 0.00 0.00 45.90 4.06
1506 1585 5.617028 CGATCATCATCGTATGCTACATG 57.383 43.478 0.00 0.00 45.90 3.21
1518 1597 3.797039 TGGTTGGTCTTCGATCATCATC 58.203 45.455 0.00 0.00 0.00 2.92
1519 1598 3.198635 ACTGGTTGGTCTTCGATCATCAT 59.801 43.478 0.00 0.00 0.00 2.45
1520 1599 2.567169 ACTGGTTGGTCTTCGATCATCA 59.433 45.455 0.00 0.00 0.00 3.07
1528 1607 3.006967 TCTCTTGCTACTGGTTGGTCTTC 59.993 47.826 0.00 0.00 0.00 2.87
1550 1629 4.114058 ACCACGTACGTATTTACATGCT 57.886 40.909 22.34 0.00 0.00 3.79
1553 1632 6.968904 CAGAGTAACCACGTACGTATTTACAT 59.031 38.462 32.06 23.99 31.90 2.29
1559 1638 2.749076 TGCAGAGTAACCACGTACGTAT 59.251 45.455 22.34 12.77 0.00 3.06
1560 1639 2.095768 GTGCAGAGTAACCACGTACGTA 60.096 50.000 22.34 1.84 0.00 3.57
1561 1640 0.953727 TGCAGAGTAACCACGTACGT 59.046 50.000 16.72 16.72 0.00 3.57
1562 1641 1.068748 AGTGCAGAGTAACCACGTACG 60.069 52.381 15.01 15.01 34.79 3.67
1581 1660 0.457035 AACCACAAAGCAGTGCACAG 59.543 50.000 21.04 12.97 38.18 3.66
1582 1661 0.173029 CAACCACAAAGCAGTGCACA 59.827 50.000 21.04 0.00 38.18 4.57
1583 1662 0.528249 CCAACCACAAAGCAGTGCAC 60.528 55.000 19.20 9.40 38.18 4.57
1584 1663 0.969917 ACCAACCACAAAGCAGTGCA 60.970 50.000 19.20 0.00 38.18 4.57
1585 1664 0.528249 CACCAACCACAAAGCAGTGC 60.528 55.000 7.13 7.13 38.18 4.40
1594 1673 0.035534 CGGGATCATCACCAACCACA 60.036 55.000 0.00 0.00 0.00 4.17
1651 1733 6.169094 ACCACAAGAGTACAATCATCAGAAG 58.831 40.000 0.00 0.00 0.00 2.85
1653 1735 5.745312 ACCACAAGAGTACAATCATCAGA 57.255 39.130 0.00 0.00 0.00 3.27
1668 1750 4.237349 GTGGAACATTACCAACCACAAG 57.763 45.455 0.00 0.00 46.75 3.16
1689 1771 0.976963 GCACATGAACAAACATCGCG 59.023 50.000 0.00 0.00 0.00 5.87
1710 1792 7.724506 TGGTCTCAAATCAGTAGGTATAGGTAG 59.275 40.741 0.00 0.00 0.00 3.18
1713 1795 6.978674 TGGTCTCAAATCAGTAGGTATAGG 57.021 41.667 0.00 0.00 0.00 2.57
1727 1809 2.178580 GCCCATGGATTTGGTCTCAAA 58.821 47.619 15.22 0.00 45.61 2.69
1728 1810 1.619432 GGCCCATGGATTTGGTCTCAA 60.619 52.381 15.22 0.00 34.77 3.02
1729 1811 0.033208 GGCCCATGGATTTGGTCTCA 60.033 55.000 15.22 0.00 34.77 3.27
1730 1812 0.033208 TGGCCCATGGATTTGGTCTC 60.033 55.000 15.22 0.00 34.77 3.36
1731 1813 0.638292 ATGGCCCATGGATTTGGTCT 59.362 50.000 15.22 0.00 34.77 3.85
1732 1814 0.754472 CATGGCCCATGGATTTGGTC 59.246 55.000 16.33 0.00 38.11 4.02
1733 1815 2.919255 CATGGCCCATGGATTTGGT 58.081 52.632 16.33 0.00 38.11 3.67
1758 1840 0.246635 CCTCCACCAGTACAACGAGG 59.753 60.000 0.00 0.00 0.00 4.63
1759 1841 1.254026 TCCTCCACCAGTACAACGAG 58.746 55.000 0.00 0.00 0.00 4.18
1760 1842 1.707106 TTCCTCCACCAGTACAACGA 58.293 50.000 0.00 0.00 0.00 3.85
1761 1843 2.224209 ACTTTCCTCCACCAGTACAACG 60.224 50.000 0.00 0.00 0.00 4.10
1773 1861 2.267192 AGGTCCACCTTACTTTCCTCC 58.733 52.381 0.00 0.00 46.09 4.30
1785 1873 5.639506 CACATGATCGATAATAAGGTCCACC 59.360 44.000 0.00 0.00 0.00 4.61
1787 1875 5.221621 TGCACATGATCGATAATAAGGTCCA 60.222 40.000 0.00 0.00 0.00 4.02
1788 1876 5.237815 TGCACATGATCGATAATAAGGTCC 58.762 41.667 0.00 0.00 0.00 4.46
1790 1878 4.692625 GCTGCACATGATCGATAATAAGGT 59.307 41.667 0.00 0.00 0.00 3.50
1791 1879 4.201656 CGCTGCACATGATCGATAATAAGG 60.202 45.833 0.00 0.00 0.00 2.69
1794 1882 2.667969 GCGCTGCACATGATCGATAATA 59.332 45.455 0.00 0.00 0.00 0.98
1795 1883 1.462283 GCGCTGCACATGATCGATAAT 59.538 47.619 0.00 0.00 0.00 1.28
1836 1924 9.757227 TGAAACTTTTCTGTCTCAAAAGAAAAA 57.243 25.926 11.00 0.00 46.36 1.94
1837 1925 9.927668 ATGAAACTTTTCTGTCTCAAAAGAAAA 57.072 25.926 11.00 9.50 45.48 2.29
1838 1926 9.573133 GATGAAACTTTTCTGTCTCAAAAGAAA 57.427 29.630 11.00 0.00 41.52 2.52
1839 1927 8.960591 AGATGAAACTTTTCTGTCTCAAAAGAA 58.039 29.630 11.00 0.00 41.52 2.52
1840 1928 8.511604 AGATGAAACTTTTCTGTCTCAAAAGA 57.488 30.769 11.00 0.00 41.52 2.52
1841 1929 9.578439 AAAGATGAAACTTTTCTGTCTCAAAAG 57.422 29.630 3.48 3.84 43.63 2.27
1842 1930 9.357652 CAAAGATGAAACTTTTCTGTCTCAAAA 57.642 29.630 3.48 0.00 37.91 2.44
1843 1931 8.739039 TCAAAGATGAAACTTTTCTGTCTCAAA 58.261 29.630 3.48 0.00 37.91 2.69
1844 1932 8.279970 TCAAAGATGAAACTTTTCTGTCTCAA 57.720 30.769 3.48 0.00 37.91 3.02
1845 1933 7.864108 TCAAAGATGAAACTTTTCTGTCTCA 57.136 32.000 3.48 0.00 37.91 3.27
1923 2012 5.318889 TCAGTCACCTCCCTTCCCTATATAT 59.681 44.000 0.00 0.00 0.00 0.86
1924 2013 4.673132 TCAGTCACCTCCCTTCCCTATATA 59.327 45.833 0.00 0.00 0.00 0.86
1925 2014 3.471306 TCAGTCACCTCCCTTCCCTATAT 59.529 47.826 0.00 0.00 0.00 0.86
1926 2015 2.863238 TCAGTCACCTCCCTTCCCTATA 59.137 50.000 0.00 0.00 0.00 1.31
1927 2016 1.651770 TCAGTCACCTCCCTTCCCTAT 59.348 52.381 0.00 0.00 0.00 2.57
1928 2017 1.089978 TCAGTCACCTCCCTTCCCTA 58.910 55.000 0.00 0.00 0.00 3.53
1929 2018 0.545548 GTCAGTCACCTCCCTTCCCT 60.546 60.000 0.00 0.00 0.00 4.20
1930 2019 0.836400 TGTCAGTCACCTCCCTTCCC 60.836 60.000 0.00 0.00 0.00 3.97
1931 2020 0.610687 CTGTCAGTCACCTCCCTTCC 59.389 60.000 0.00 0.00 0.00 3.46
1966 2055 8.331742 GCAGCTGAATTAATTAGTTGTAGAGAC 58.668 37.037 20.43 0.00 0.00 3.36
1973 2062 7.307694 TGTCTTGCAGCTGAATTAATTAGTTG 58.692 34.615 20.43 8.41 0.00 3.16
2005 2094 4.469945 ACCAAGGAATGAAGGACGATCTAA 59.530 41.667 0.00 0.00 0.00 2.10
2006 2095 4.030913 ACCAAGGAATGAAGGACGATCTA 58.969 43.478 0.00 0.00 0.00 1.98
2010 2099 1.003118 CCACCAAGGAATGAAGGACGA 59.997 52.381 0.00 0.00 41.22 4.20
2013 2102 1.075374 CACCCACCAAGGAATGAAGGA 59.925 52.381 0.00 0.00 41.22 3.36
2015 2104 0.890683 GCACCCACCAAGGAATGAAG 59.109 55.000 0.00 0.00 41.22 3.02
2025 2114 9.821240 ATTTATTCAATATTATAGCACCCACCA 57.179 29.630 0.00 0.00 0.00 4.17
2074 2167 3.429881 GGCTGTTGTTTGAAAGCATTAGC 59.570 43.478 0.00 7.10 37.40 3.09
2075 2168 4.445385 GTGGCTGTTGTTTGAAAGCATTAG 59.555 41.667 0.00 0.00 37.40 1.73
2076 2169 4.367450 GTGGCTGTTGTTTGAAAGCATTA 58.633 39.130 0.00 0.00 37.40 1.90
2077 2170 3.197265 GTGGCTGTTGTTTGAAAGCATT 58.803 40.909 0.00 0.00 37.40 3.56
2078 2171 2.483538 GGTGGCTGTTGTTTGAAAGCAT 60.484 45.455 0.00 0.00 37.40 3.79
2079 2172 1.134848 GGTGGCTGTTGTTTGAAAGCA 60.135 47.619 0.00 0.00 37.40 3.91
2080 2173 1.134848 TGGTGGCTGTTGTTTGAAAGC 60.135 47.619 0.00 0.00 34.86 3.51
2081 2174 2.957491 TGGTGGCTGTTGTTTGAAAG 57.043 45.000 0.00 0.00 0.00 2.62
2082 2175 2.828520 TCTTGGTGGCTGTTGTTTGAAA 59.171 40.909 0.00 0.00 0.00 2.69
2083 2176 2.451490 TCTTGGTGGCTGTTGTTTGAA 58.549 42.857 0.00 0.00 0.00 2.69
2084 2177 2.136298 TCTTGGTGGCTGTTGTTTGA 57.864 45.000 0.00 0.00 0.00 2.69
2085 2178 2.957491 TTCTTGGTGGCTGTTGTTTG 57.043 45.000 0.00 0.00 0.00 2.93
2086 2179 3.432046 CCATTTCTTGGTGGCTGTTGTTT 60.432 43.478 0.00 0.00 40.99 2.83
2087 2180 2.102925 CCATTTCTTGGTGGCTGTTGTT 59.897 45.455 0.00 0.00 40.99 2.83
2088 2181 1.688197 CCATTTCTTGGTGGCTGTTGT 59.312 47.619 0.00 0.00 40.99 3.32
2089 2182 1.962807 TCCATTTCTTGGTGGCTGTTG 59.037 47.619 0.00 0.00 46.52 3.33
2090 2183 2.242043 CTCCATTTCTTGGTGGCTGTT 58.758 47.619 0.00 0.00 46.52 3.16
2091 2184 1.915141 CTCCATTTCTTGGTGGCTGT 58.085 50.000 0.00 0.00 46.52 4.40
2092 2185 0.529378 GCTCCATTTCTTGGTGGCTG 59.471 55.000 0.00 0.00 46.52 4.85
2093 2186 0.112995 TGCTCCATTTCTTGGTGGCT 59.887 50.000 11.26 0.00 46.52 4.75
2094 2187 0.244721 GTGCTCCATTTCTTGGTGGC 59.755 55.000 0.00 0.00 46.52 5.01
2095 2188 1.542915 CAGTGCTCCATTTCTTGGTGG 59.457 52.381 0.00 0.00 46.52 4.61
2096 2189 1.542915 CCAGTGCTCCATTTCTTGGTG 59.457 52.381 0.00 0.00 46.52 4.17
2097 2190 1.548582 CCCAGTGCTCCATTTCTTGGT 60.549 52.381 0.00 0.00 46.52 3.67
2099 2192 1.915141 ACCCAGTGCTCCATTTCTTG 58.085 50.000 0.00 0.00 0.00 3.02
2100 2193 2.683211 AACCCAGTGCTCCATTTCTT 57.317 45.000 0.00 0.00 0.00 2.52
2101 2194 3.624777 CATAACCCAGTGCTCCATTTCT 58.375 45.455 0.00 0.00 0.00 2.52
2102 2195 2.099756 GCATAACCCAGTGCTCCATTTC 59.900 50.000 0.00 0.00 38.30 2.17
2103 2196 2.102578 GCATAACCCAGTGCTCCATTT 58.897 47.619 0.00 0.00 38.30 2.32
2104 2197 1.686115 GGCATAACCCAGTGCTCCATT 60.686 52.381 0.00 0.00 41.04 3.16
2105 2198 0.106519 GGCATAACCCAGTGCTCCAT 60.107 55.000 0.00 0.00 41.04 3.41
2106 2199 1.302949 GGCATAACCCAGTGCTCCA 59.697 57.895 0.00 0.00 41.04 3.86
2107 2200 1.819632 CGGCATAACCCAGTGCTCC 60.820 63.158 0.00 0.00 41.04 4.70
2108 2201 1.090052 GTCGGCATAACCCAGTGCTC 61.090 60.000 0.00 0.00 41.04 4.26
2109 2202 1.078426 GTCGGCATAACCCAGTGCT 60.078 57.895 0.00 0.00 41.04 4.40
2110 2203 1.376683 TGTCGGCATAACCCAGTGC 60.377 57.895 0.00 0.00 40.55 4.40
2111 2204 0.321210 TGTGTCGGCATAACCCAGTG 60.321 55.000 0.00 0.00 33.26 3.66
2112 2205 0.036388 CTGTGTCGGCATAACCCAGT 60.036 55.000 0.00 0.00 33.26 4.00
2113 2206 0.744414 CCTGTGTCGGCATAACCCAG 60.744 60.000 0.00 0.00 33.26 4.45
2114 2207 1.195442 TCCTGTGTCGGCATAACCCA 61.195 55.000 0.00 0.00 33.26 4.51
2115 2208 0.462047 CTCCTGTGTCGGCATAACCC 60.462 60.000 0.00 0.00 33.26 4.11
2116 2209 1.090052 GCTCCTGTGTCGGCATAACC 61.090 60.000 0.00 0.00 0.00 2.85
2117 2210 0.391130 TGCTCCTGTGTCGGCATAAC 60.391 55.000 0.00 0.00 0.00 1.89
2118 2211 0.108186 CTGCTCCTGTGTCGGCATAA 60.108 55.000 0.00 0.00 34.12 1.90
2119 2212 1.517361 CTGCTCCTGTGTCGGCATA 59.483 57.895 0.00 0.00 34.12 3.14
2120 2213 2.267006 CTGCTCCTGTGTCGGCAT 59.733 61.111 0.00 0.00 34.12 4.40
2121 2214 4.687215 GCTGCTCCTGTGTCGGCA 62.687 66.667 0.00 0.00 32.64 5.69
2122 2215 3.890936 AAGCTGCTCCTGTGTCGGC 62.891 63.158 1.00 0.00 0.00 5.54
2123 2216 0.037326 TAAAGCTGCTCCTGTGTCGG 60.037 55.000 1.00 0.00 0.00 4.79
2124 2217 2.015736 ATAAAGCTGCTCCTGTGTCG 57.984 50.000 1.00 0.00 0.00 4.35
2125 2218 5.181245 TGTTTTATAAAGCTGCTCCTGTGTC 59.819 40.000 12.51 0.00 0.00 3.67
2126 2219 5.048713 GTGTTTTATAAAGCTGCTCCTGTGT 60.049 40.000 12.51 0.00 0.00 3.72
2127 2220 5.048782 TGTGTTTTATAAAGCTGCTCCTGTG 60.049 40.000 12.51 0.00 0.00 3.66
2128 2221 5.070001 TGTGTTTTATAAAGCTGCTCCTGT 58.930 37.500 12.51 0.00 0.00 4.00
2129 2222 5.182001 ACTGTGTTTTATAAAGCTGCTCCTG 59.818 40.000 12.51 3.86 0.00 3.86
2130 2223 5.316987 ACTGTGTTTTATAAAGCTGCTCCT 58.683 37.500 12.51 0.00 0.00 3.69
2131 2224 5.629079 ACTGTGTTTTATAAAGCTGCTCC 57.371 39.130 12.51 0.00 0.00 4.70
2132 2225 6.183360 CCCTACTGTGTTTTATAAAGCTGCTC 60.183 42.308 12.51 3.12 0.00 4.26
2133 2226 5.648092 CCCTACTGTGTTTTATAAAGCTGCT 59.352 40.000 12.51 0.00 0.00 4.24
2134 2227 5.646360 TCCCTACTGTGTTTTATAAAGCTGC 59.354 40.000 12.51 6.85 0.00 5.25
2135 2228 7.681939 TTCCCTACTGTGTTTTATAAAGCTG 57.318 36.000 12.51 7.42 0.00 4.24
2136 2229 7.176165 GGTTTCCCTACTGTGTTTTATAAAGCT 59.824 37.037 12.51 0.00 0.00 3.74
2137 2230 7.176165 AGGTTTCCCTACTGTGTTTTATAAAGC 59.824 37.037 5.19 5.19 40.19 3.51
2138 2231 8.631480 AGGTTTCCCTACTGTGTTTTATAAAG 57.369 34.615 0.00 0.00 40.19 1.85
2139 2232 8.219178 TGAGGTTTCCCTACTGTGTTTTATAAA 58.781 33.333 0.00 0.00 42.86 1.40
2140 2233 7.747690 TGAGGTTTCCCTACTGTGTTTTATAA 58.252 34.615 0.00 0.00 42.86 0.98
2141 2234 7.319052 TGAGGTTTCCCTACTGTGTTTTATA 57.681 36.000 0.00 0.00 42.86 0.98
2142 2235 6.195600 TGAGGTTTCCCTACTGTGTTTTAT 57.804 37.500 0.00 0.00 42.86 1.40
2143 2236 5.633655 TGAGGTTTCCCTACTGTGTTTTA 57.366 39.130 0.00 0.00 42.86 1.52
2144 2237 4.513406 TGAGGTTTCCCTACTGTGTTTT 57.487 40.909 0.00 0.00 42.86 2.43
2145 2238 4.724279 ATGAGGTTTCCCTACTGTGTTT 57.276 40.909 0.00 0.00 42.86 2.83
2146 2239 4.724279 AATGAGGTTTCCCTACTGTGTT 57.276 40.909 0.00 0.00 42.86 3.32
2147 2240 4.104102 TCAAATGAGGTTTCCCTACTGTGT 59.896 41.667 0.00 0.00 42.86 3.72
2148 2241 4.651778 TCAAATGAGGTTTCCCTACTGTG 58.348 43.478 0.00 0.00 42.86 3.66
2149 2242 4.993705 TCAAATGAGGTTTCCCTACTGT 57.006 40.909 0.00 0.00 42.86 3.55
2150 2243 5.355350 GTGATCAAATGAGGTTTCCCTACTG 59.645 44.000 0.00 0.00 42.86 2.74
2151 2244 5.501156 GTGATCAAATGAGGTTTCCCTACT 58.499 41.667 0.00 0.00 42.86 2.57
2152 2245 4.332819 CGTGATCAAATGAGGTTTCCCTAC 59.667 45.833 0.00 0.00 42.86 3.18
2153 2246 4.224147 TCGTGATCAAATGAGGTTTCCCTA 59.776 41.667 0.00 0.00 42.86 3.53
2154 2247 3.009033 TCGTGATCAAATGAGGTTTCCCT 59.991 43.478 0.00 0.00 46.66 4.20
2155 2248 3.127030 GTCGTGATCAAATGAGGTTTCCC 59.873 47.826 0.00 0.00 0.00 3.97
2156 2249 3.751175 TGTCGTGATCAAATGAGGTTTCC 59.249 43.478 0.00 0.00 0.00 3.13
2157 2250 4.452455 ACTGTCGTGATCAAATGAGGTTTC 59.548 41.667 0.00 0.00 0.00 2.78
2158 2251 4.389374 ACTGTCGTGATCAAATGAGGTTT 58.611 39.130 0.00 0.00 0.00 3.27
2159 2252 4.008074 ACTGTCGTGATCAAATGAGGTT 57.992 40.909 0.00 0.00 0.00 3.50
2160 2253 3.685139 ACTGTCGTGATCAAATGAGGT 57.315 42.857 0.00 0.00 0.00 3.85
2161 2254 6.480524 TTTTACTGTCGTGATCAAATGAGG 57.519 37.500 0.00 0.00 0.00 3.86
2162 2255 7.689812 GTGATTTTACTGTCGTGATCAAATGAG 59.310 37.037 0.00 0.00 0.00 2.90
2163 2256 7.172361 TGTGATTTTACTGTCGTGATCAAATGA 59.828 33.333 0.00 0.00 0.00 2.57
2164 2257 7.297391 TGTGATTTTACTGTCGTGATCAAATG 58.703 34.615 0.00 0.00 0.00 2.32
2165 2258 7.361201 CCTGTGATTTTACTGTCGTGATCAAAT 60.361 37.037 0.00 0.00 0.00 2.32
2166 2259 6.073276 CCTGTGATTTTACTGTCGTGATCAAA 60.073 38.462 0.00 0.00 0.00 2.69
2167 2260 5.408299 CCTGTGATTTTACTGTCGTGATCAA 59.592 40.000 0.00 0.00 0.00 2.57
2168 2261 4.929211 CCTGTGATTTTACTGTCGTGATCA 59.071 41.667 0.00 0.00 0.00 2.92
2169 2262 4.201724 GCCTGTGATTTTACTGTCGTGATC 60.202 45.833 0.00 0.00 0.00 2.92
2170 2263 3.684788 GCCTGTGATTTTACTGTCGTGAT 59.315 43.478 0.00 0.00 0.00 3.06
2171 2264 3.064207 GCCTGTGATTTTACTGTCGTGA 58.936 45.455 0.00 0.00 0.00 4.35
2172 2265 3.067106 AGCCTGTGATTTTACTGTCGTG 58.933 45.455 0.00 0.00 0.00 4.35
2173 2266 3.402628 AGCCTGTGATTTTACTGTCGT 57.597 42.857 0.00 0.00 0.00 4.34
2174 2267 4.242475 TGTAGCCTGTGATTTTACTGTCG 58.758 43.478 0.00 0.00 0.00 4.35
2175 2268 4.631813 CCTGTAGCCTGTGATTTTACTGTC 59.368 45.833 0.00 0.00 0.00 3.51
2176 2269 4.286032 TCCTGTAGCCTGTGATTTTACTGT 59.714 41.667 0.00 0.00 0.00 3.55
2177 2270 4.832248 TCCTGTAGCCTGTGATTTTACTG 58.168 43.478 0.00 0.00 0.00 2.74
2178 2271 5.675538 GATCCTGTAGCCTGTGATTTTACT 58.324 41.667 0.00 0.00 0.00 2.24
2179 2272 4.508124 CGATCCTGTAGCCTGTGATTTTAC 59.492 45.833 0.00 0.00 0.00 2.01
2180 2273 4.693283 CGATCCTGTAGCCTGTGATTTTA 58.307 43.478 0.00 0.00 0.00 1.52
2181 2274 3.535561 CGATCCTGTAGCCTGTGATTTT 58.464 45.455 0.00 0.00 0.00 1.82
2182 2275 2.743183 GCGATCCTGTAGCCTGTGATTT 60.743 50.000 0.00 0.00 0.00 2.17
2183 2276 1.202580 GCGATCCTGTAGCCTGTGATT 60.203 52.381 0.00 0.00 0.00 2.57
2184 2277 0.390860 GCGATCCTGTAGCCTGTGAT 59.609 55.000 0.00 0.00 0.00 3.06
2185 2278 1.676678 GGCGATCCTGTAGCCTGTGA 61.677 60.000 1.67 0.00 44.42 3.58
2186 2279 1.227380 GGCGATCCTGTAGCCTGTG 60.227 63.158 1.67 0.00 44.42 3.66
2187 2280 3.221222 GGCGATCCTGTAGCCTGT 58.779 61.111 1.67 0.00 44.42 4.00
2191 2284 2.808543 CCTAAATTGGCGATCCTGTAGC 59.191 50.000 0.00 0.00 0.00 3.58
2192 2285 4.202264 ACTCCTAAATTGGCGATCCTGTAG 60.202 45.833 0.00 0.00 0.00 2.74
2193 2286 3.709653 ACTCCTAAATTGGCGATCCTGTA 59.290 43.478 0.00 0.00 0.00 2.74
2194 2287 2.505819 ACTCCTAAATTGGCGATCCTGT 59.494 45.455 0.00 0.00 0.00 4.00
2195 2288 3.199880 ACTCCTAAATTGGCGATCCTG 57.800 47.619 0.00 0.00 0.00 3.86
2196 2289 3.709653 TGTACTCCTAAATTGGCGATCCT 59.290 43.478 0.00 0.00 0.00 3.24
2197 2290 3.808174 GTGTACTCCTAAATTGGCGATCC 59.192 47.826 0.00 0.00 0.00 3.36
2198 2291 4.270325 GTGTGTACTCCTAAATTGGCGATC 59.730 45.833 0.00 0.00 0.00 3.69
2199 2292 4.189231 GTGTGTACTCCTAAATTGGCGAT 58.811 43.478 0.00 0.00 0.00 4.58
2200 2293 3.007074 TGTGTGTACTCCTAAATTGGCGA 59.993 43.478 0.00 0.00 0.00 5.54
2201 2294 3.331150 TGTGTGTACTCCTAAATTGGCG 58.669 45.455 0.00 0.00 0.00 5.69
2202 2295 4.517453 TGTTGTGTGTACTCCTAAATTGGC 59.483 41.667 0.00 0.00 0.00 4.52
2203 2296 6.293955 CCTTGTTGTGTGTACTCCTAAATTGG 60.294 42.308 0.00 0.00 0.00 3.16
2204 2297 6.262273 ACCTTGTTGTGTGTACTCCTAAATTG 59.738 38.462 0.00 0.00 0.00 2.32
2205 2298 6.362248 ACCTTGTTGTGTGTACTCCTAAATT 58.638 36.000 0.00 0.00 0.00 1.82
2206 2299 5.937111 ACCTTGTTGTGTGTACTCCTAAAT 58.063 37.500 0.00 0.00 0.00 1.40
2207 2300 5.362105 ACCTTGTTGTGTGTACTCCTAAA 57.638 39.130 0.00 0.00 0.00 1.85
2208 2301 4.500205 CGACCTTGTTGTGTGTACTCCTAA 60.500 45.833 0.00 0.00 0.00 2.69
2209 2302 3.005050 CGACCTTGTTGTGTGTACTCCTA 59.995 47.826 0.00 0.00 0.00 2.94
2210 2303 2.223971 CGACCTTGTTGTGTGTACTCCT 60.224 50.000 0.00 0.00 0.00 3.69
2211 2304 2.132762 CGACCTTGTTGTGTGTACTCC 58.867 52.381 0.00 0.00 0.00 3.85
2212 2305 3.088194 TCGACCTTGTTGTGTGTACTC 57.912 47.619 0.00 0.00 0.00 2.59
2213 2306 3.530265 TTCGACCTTGTTGTGTGTACT 57.470 42.857 0.00 0.00 0.00 2.73
2214 2307 3.121126 CGATTCGACCTTGTTGTGTGTAC 60.121 47.826 0.00 0.00 0.00 2.90
2215 2308 3.054166 CGATTCGACCTTGTTGTGTGTA 58.946 45.455 0.00 0.00 0.00 2.90
2216 2309 1.864711 CGATTCGACCTTGTTGTGTGT 59.135 47.619 0.00 0.00 0.00 3.72
2217 2310 1.864711 ACGATTCGACCTTGTTGTGTG 59.135 47.619 13.95 0.00 0.00 3.82
2218 2311 2.234300 ACGATTCGACCTTGTTGTGT 57.766 45.000 13.95 0.00 0.00 3.72
2219 2312 4.718858 TTTACGATTCGACCTTGTTGTG 57.281 40.909 13.95 0.00 0.00 3.33
2220 2313 4.571580 TGTTTTACGATTCGACCTTGTTGT 59.428 37.500 13.95 0.00 0.00 3.32
2221 2314 5.085636 TGTTTTACGATTCGACCTTGTTG 57.914 39.130 13.95 0.00 0.00 3.33
2222 2315 5.738118 TTGTTTTACGATTCGACCTTGTT 57.262 34.783 13.95 0.00 0.00 2.83
2223 2316 5.524646 TCTTTGTTTTACGATTCGACCTTGT 59.475 36.000 13.95 0.00 0.00 3.16
2224 2317 5.981174 TCTTTGTTTTACGATTCGACCTTG 58.019 37.500 13.95 0.00 0.00 3.61
2225 2318 6.293244 CCTTCTTTGTTTTACGATTCGACCTT 60.293 38.462 13.95 0.00 0.00 3.50
2226 2319 5.178809 CCTTCTTTGTTTTACGATTCGACCT 59.821 40.000 13.95 0.00 0.00 3.85
2227 2320 5.379827 CCTTCTTTGTTTTACGATTCGACC 58.620 41.667 13.95 0.00 0.00 4.79
2228 2321 4.844522 GCCTTCTTTGTTTTACGATTCGAC 59.155 41.667 13.95 0.66 0.00 4.20
2229 2322 4.512198 TGCCTTCTTTGTTTTACGATTCGA 59.488 37.500 13.95 0.00 0.00 3.71
2230 2323 4.611366 GTGCCTTCTTTGTTTTACGATTCG 59.389 41.667 4.14 4.14 0.00 3.34
2231 2324 4.611366 CGTGCCTTCTTTGTTTTACGATTC 59.389 41.667 0.00 0.00 32.58 2.52
2232 2325 4.533222 CGTGCCTTCTTTGTTTTACGATT 58.467 39.130 0.00 0.00 32.58 3.34
2233 2326 3.058501 CCGTGCCTTCTTTGTTTTACGAT 60.059 43.478 0.00 0.00 32.58 3.73
2234 2327 2.288458 CCGTGCCTTCTTTGTTTTACGA 59.712 45.455 0.00 0.00 32.58 3.43
2235 2328 2.603652 CCCGTGCCTTCTTTGTTTTACG 60.604 50.000 0.00 0.00 0.00 3.18
2236 2329 2.860971 GCCCGTGCCTTCTTTGTTTTAC 60.861 50.000 0.00 0.00 0.00 2.01
2237 2330 1.338655 GCCCGTGCCTTCTTTGTTTTA 59.661 47.619 0.00 0.00 0.00 1.52
2238 2331 0.104120 GCCCGTGCCTTCTTTGTTTT 59.896 50.000 0.00 0.00 0.00 2.43
2239 2332 1.739667 GCCCGTGCCTTCTTTGTTT 59.260 52.632 0.00 0.00 0.00 2.83
2240 2333 2.551912 CGCCCGTGCCTTCTTTGTT 61.552 57.895 0.00 0.00 0.00 2.83
2241 2334 2.978010 CGCCCGTGCCTTCTTTGT 60.978 61.111 0.00 0.00 0.00 2.83
2242 2335 4.404654 GCGCCCGTGCCTTCTTTG 62.405 66.667 0.00 0.00 0.00 2.77
2256 2349 0.109504 TTAAATTCTGTTGGCCGCGC 60.110 50.000 0.00 0.00 0.00 6.86
2257 2350 2.339728 TTTAAATTCTGTTGGCCGCG 57.660 45.000 0.00 0.00 0.00 6.46
2258 2351 2.993220 CCTTTTAAATTCTGTTGGCCGC 59.007 45.455 0.00 0.00 0.00 6.53
2259 2352 4.513198 TCCTTTTAAATTCTGTTGGCCG 57.487 40.909 0.00 0.00 0.00 6.13
2260 2353 6.535150 GCTATTCCTTTTAAATTCTGTTGGCC 59.465 38.462 0.00 0.00 0.00 5.36
2261 2354 7.276438 CAGCTATTCCTTTTAAATTCTGTTGGC 59.724 37.037 0.00 0.00 0.00 4.52
2262 2355 7.276438 GCAGCTATTCCTTTTAAATTCTGTTGG 59.724 37.037 0.00 0.00 0.00 3.77
2263 2356 8.031277 AGCAGCTATTCCTTTTAAATTCTGTTG 58.969 33.333 0.00 0.00 0.00 3.33
2264 2357 8.127150 AGCAGCTATTCCTTTTAAATTCTGTT 57.873 30.769 0.00 0.00 0.00 3.16
2265 2358 7.709149 AGCAGCTATTCCTTTTAAATTCTGT 57.291 32.000 0.00 0.00 0.00 3.41
2271 2364 9.338622 GGAGTAATAGCAGCTATTCCTTTTAAA 57.661 33.333 27.67 8.21 37.72 1.52
2272 2365 7.937394 GGGAGTAATAGCAGCTATTCCTTTTAA 59.063 37.037 27.67 8.89 37.72 1.52
2273 2366 7.292591 AGGGAGTAATAGCAGCTATTCCTTTTA 59.707 37.037 27.67 9.57 37.72 1.52
2274 2367 6.101881 AGGGAGTAATAGCAGCTATTCCTTTT 59.898 38.462 27.67 9.58 37.72 2.27
2275 2368 5.608860 AGGGAGTAATAGCAGCTATTCCTTT 59.391 40.000 27.67 14.28 37.72 3.11
2276 2369 5.158889 AGGGAGTAATAGCAGCTATTCCTT 58.841 41.667 27.67 17.96 37.72 3.36
2277 2370 4.757692 AGGGAGTAATAGCAGCTATTCCT 58.242 43.478 27.67 22.65 37.72 3.36
2278 2371 4.081365 GGAGGGAGTAATAGCAGCTATTCC 60.081 50.000 27.67 22.52 37.72 3.01
2279 2372 4.381079 CGGAGGGAGTAATAGCAGCTATTC 60.381 50.000 27.67 19.22 37.72 1.75
2280 2373 3.511934 CGGAGGGAGTAATAGCAGCTATT 59.488 47.826 27.13 27.13 39.58 1.73
2281 2374 3.093057 CGGAGGGAGTAATAGCAGCTAT 58.907 50.000 9.33 9.33 0.00 2.97
2282 2375 2.158505 ACGGAGGGAGTAATAGCAGCTA 60.159 50.000 4.10 4.10 0.00 3.32
2283 2376 1.333177 CGGAGGGAGTAATAGCAGCT 58.667 55.000 0.00 0.00 0.00 4.24
2284 2377 1.041437 ACGGAGGGAGTAATAGCAGC 58.959 55.000 0.00 0.00 0.00 5.25
2285 2378 3.132289 TGAAACGGAGGGAGTAATAGCAG 59.868 47.826 0.00 0.00 0.00 4.24
2286 2379 3.101437 TGAAACGGAGGGAGTAATAGCA 58.899 45.455 0.00 0.00 0.00 3.49
2287 2380 3.814005 TGAAACGGAGGGAGTAATAGC 57.186 47.619 0.00 0.00 0.00 2.97
2288 2381 8.804204 AGTAATATGAAACGGAGGGAGTAATAG 58.196 37.037 0.00 0.00 0.00 1.73
2289 2382 8.716674 AGTAATATGAAACGGAGGGAGTAATA 57.283 34.615 0.00 0.00 0.00 0.98
2290 2383 7.613551 AGTAATATGAAACGGAGGGAGTAAT 57.386 36.000 0.00 0.00 0.00 1.89
2291 2384 7.093201 ACAAGTAATATGAAACGGAGGGAGTAA 60.093 37.037 0.00 0.00 0.00 2.24
2292 2385 6.381994 ACAAGTAATATGAAACGGAGGGAGTA 59.618 38.462 0.00 0.00 0.00 2.59
2293 2386 5.189145 ACAAGTAATATGAAACGGAGGGAGT 59.811 40.000 0.00 0.00 0.00 3.85
2294 2387 5.671493 ACAAGTAATATGAAACGGAGGGAG 58.329 41.667 0.00 0.00 0.00 4.30
2295 2388 5.188163 TGACAAGTAATATGAAACGGAGGGA 59.812 40.000 0.00 0.00 0.00 4.20
2296 2389 5.293569 GTGACAAGTAATATGAAACGGAGGG 59.706 44.000 0.00 0.00 0.00 4.30
2297 2390 5.872617 TGTGACAAGTAATATGAAACGGAGG 59.127 40.000 0.00 0.00 0.00 4.30
2298 2391 6.811665 TCTGTGACAAGTAATATGAAACGGAG 59.188 38.462 0.00 0.00 0.00 4.63
2299 2392 6.693466 TCTGTGACAAGTAATATGAAACGGA 58.307 36.000 0.00 0.00 0.00 4.69
2300 2393 6.961359 TCTGTGACAAGTAATATGAAACGG 57.039 37.500 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.