Multiple sequence alignment - TraesCS7A01G333700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G333700 chr7A 100.000 1339 0 0 1312 2650 487248754 487250092 0.000000e+00 2473.0
1 TraesCS7A01G333700 chr7A 100.000 1036 0 0 1 1036 487247443 487248478 0.000000e+00 1914.0
2 TraesCS7A01G333700 chr7D 86.031 902 54 36 1312 2179 436968282 436969145 0.000000e+00 902.0
3 TraesCS7A01G333700 chr7D 90.572 594 33 8 461 1036 436967633 436968221 0.000000e+00 765.0
4 TraesCS7A01G333700 chr7D 83.860 285 37 4 60 337 436967262 436967544 2.020000e-66 263.0
5 TraesCS7A01G333700 chr7D 89.412 85 4 3 2352 2432 436969995 436970078 4.670000e-18 102.0
6 TraesCS7A01G333700 chr7B 91.980 611 21 14 1312 1908 453758288 453758884 0.000000e+00 832.0
7 TraesCS7A01G333700 chr7B 85.538 567 33 16 478 1036 453757702 453758227 4.990000e-152 547.0
8 TraesCS7A01G333700 chr7B 86.495 311 40 2 1 310 453631866 453632175 9.080000e-90 340.0
9 TraesCS7A01G333700 chr5D 82.609 69 8 4 125 191 249996248 249996182 1.020000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G333700 chr7A 487247443 487250092 2649 False 2193.5 2473 100.00000 1 2650 2 chr7A.!!$F1 2649
1 TraesCS7A01G333700 chr7D 436967262 436970078 2816 False 508.0 902 87.46875 60 2432 4 chr7D.!!$F1 2372
2 TraesCS7A01G333700 chr7B 453757702 453758884 1182 False 689.5 832 88.75900 478 1908 2 chr7B.!!$F2 1430

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
419 426 0.108329 CGCGGACCTGGTCAACTATT 60.108 55.0 26.94 0.0 33.68 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2153 2256 0.987294 TCCTCCTCTTTTGCCTCTGG 59.013 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.587952 AGGTTGTGTTTGCATTTTTATAGAAC 57.412 30.769 0.00 0.00 0.00 3.01
27 28 7.655732 AGGTTGTGTTTGCATTTTTATAGAACC 59.344 33.333 0.00 0.00 0.00 3.62
28 29 7.655732 GGTTGTGTTTGCATTTTTATAGAACCT 59.344 33.333 0.00 0.00 0.00 3.50
29 30 9.040939 GTTGTGTTTGCATTTTTATAGAACCTT 57.959 29.630 0.00 0.00 0.00 3.50
30 31 8.810652 TGTGTTTGCATTTTTATAGAACCTTC 57.189 30.769 0.00 0.00 0.00 3.46
31 32 8.637986 TGTGTTTGCATTTTTATAGAACCTTCT 58.362 29.630 0.00 0.00 41.24 2.85
32 33 9.476202 GTGTTTGCATTTTTATAGAACCTTCTT 57.524 29.630 0.00 0.00 38.70 2.52
37 38 8.739972 TGCATTTTTATAGAACCTTCTTTCTCC 58.260 33.333 0.00 0.00 38.70 3.71
38 39 7.910683 GCATTTTTATAGAACCTTCTTTCTCCG 59.089 37.037 0.00 0.00 38.70 4.63
39 40 6.980051 TTTTATAGAACCTTCTTTCTCCGC 57.020 37.500 0.00 0.00 38.70 5.54
40 41 5.670792 TTATAGAACCTTCTTTCTCCGCA 57.329 39.130 0.00 0.00 38.70 5.69
41 42 2.930826 AGAACCTTCTTTCTCCGCAA 57.069 45.000 0.00 0.00 32.55 4.85
42 43 3.208747 AGAACCTTCTTTCTCCGCAAA 57.791 42.857 0.00 0.00 32.55 3.68
43 44 3.756117 AGAACCTTCTTTCTCCGCAAAT 58.244 40.909 0.00 0.00 32.55 2.32
44 45 3.753797 AGAACCTTCTTTCTCCGCAAATC 59.246 43.478 0.00 0.00 32.55 2.17
45 46 2.437413 ACCTTCTTTCTCCGCAAATCC 58.563 47.619 0.00 0.00 0.00 3.01
46 47 1.745653 CCTTCTTTCTCCGCAAATCCC 59.254 52.381 0.00 0.00 0.00 3.85
47 48 2.619074 CCTTCTTTCTCCGCAAATCCCT 60.619 50.000 0.00 0.00 0.00 4.20
48 49 3.370527 CCTTCTTTCTCCGCAAATCCCTA 60.371 47.826 0.00 0.00 0.00 3.53
49 50 3.992943 TCTTTCTCCGCAAATCCCTAA 57.007 42.857 0.00 0.00 0.00 2.69
50 51 4.295141 TCTTTCTCCGCAAATCCCTAAA 57.705 40.909 0.00 0.00 0.00 1.85
51 52 4.855340 TCTTTCTCCGCAAATCCCTAAAT 58.145 39.130 0.00 0.00 0.00 1.40
52 53 4.881850 TCTTTCTCCGCAAATCCCTAAATC 59.118 41.667 0.00 0.00 0.00 2.17
53 54 4.503714 TTCTCCGCAAATCCCTAAATCT 57.496 40.909 0.00 0.00 0.00 2.40
54 55 5.623956 TTCTCCGCAAATCCCTAAATCTA 57.376 39.130 0.00 0.00 0.00 1.98
55 56 5.825593 TCTCCGCAAATCCCTAAATCTAT 57.174 39.130 0.00 0.00 0.00 1.98
56 57 6.928348 TCTCCGCAAATCCCTAAATCTATA 57.072 37.500 0.00 0.00 0.00 1.31
57 58 7.311092 TCTCCGCAAATCCCTAAATCTATAA 57.689 36.000 0.00 0.00 0.00 0.98
58 59 7.918076 TCTCCGCAAATCCCTAAATCTATAAT 58.082 34.615 0.00 0.00 0.00 1.28
83 84 3.319122 AGCTTAAAGTTTGCAACCTCCTG 59.681 43.478 0.00 0.00 0.00 3.86
92 93 1.302511 CAACCTCCTGTTCACCCCG 60.303 63.158 0.00 0.00 34.00 5.73
110 117 1.575244 CGTCTAGTGGACCGTATCGA 58.425 55.000 0.45 0.00 41.64 3.59
122 129 2.165030 ACCGTATCGATCGTTTCACCTT 59.835 45.455 15.94 0.00 0.00 3.50
133 140 0.196118 TTTCACCTTCCCCTCCTCCT 59.804 55.000 0.00 0.00 0.00 3.69
138 145 1.074850 CTTCCCCTCCTCCTCTCCC 60.075 68.421 0.00 0.00 0.00 4.30
141 148 2.328589 CCCCTCCTCCTCTCCCTCA 61.329 68.421 0.00 0.00 0.00 3.86
142 149 1.075600 CCCTCCTCCTCTCCCTCAC 60.076 68.421 0.00 0.00 0.00 3.51
168 175 1.227089 CGAGGAGGTCATCGGCAAG 60.227 63.158 6.15 0.00 45.11 4.01
169 176 1.144936 GAGGAGGTCATCGGCAAGG 59.855 63.158 0.00 0.00 0.00 3.61
215 222 1.191944 CGATGATCGTGTCACTTCGG 58.808 55.000 6.68 0.00 40.28 4.30
216 223 1.467543 CGATGATCGTGTCACTTCGGT 60.468 52.381 6.68 0.00 40.28 4.69
226 233 3.617263 GTGTCACTTCGGTCCATCATTAC 59.383 47.826 0.00 0.00 0.00 1.89
236 243 4.670735 CGGTCCATCATTACGTTTGAAACC 60.671 45.833 2.00 6.97 0.00 3.27
239 246 4.457603 TCCATCATTACGTTTGAAACCCAG 59.542 41.667 2.00 0.00 0.00 4.45
242 249 6.317642 CCATCATTACGTTTGAAACCCAGATA 59.682 38.462 2.00 0.00 0.00 1.98
243 250 7.013274 CCATCATTACGTTTGAAACCCAGATAT 59.987 37.037 2.00 0.00 0.00 1.63
247 254 7.931578 TTACGTTTGAAACCCAGATATGAAT 57.068 32.000 2.00 0.00 0.00 2.57
251 258 8.405531 ACGTTTGAAACCCAGATATGAATATTG 58.594 33.333 2.00 0.00 0.00 1.90
255 262 6.838090 TGAAACCCAGATATGAATATTGGCAA 59.162 34.615 0.68 0.68 0.00 4.52
256 263 6.906157 AACCCAGATATGAATATTGGCAAG 57.094 37.500 5.96 0.00 0.00 4.01
270 277 8.986477 AATATTGGCAAGTGTGAAGATAAAAC 57.014 30.769 5.96 0.00 0.00 2.43
271 278 6.655078 ATTGGCAAGTGTGAAGATAAAACT 57.345 33.333 5.96 0.00 0.00 2.66
276 283 6.150140 GGCAAGTGTGAAGATAAAACTCAGAT 59.850 38.462 0.00 0.00 0.00 2.90
309 316 8.138074 GCAACATAACTCAGAGTGATATACAGA 58.862 37.037 3.05 0.00 0.00 3.41
310 317 9.676195 CAACATAACTCAGAGTGATATACAGAG 57.324 37.037 3.05 0.00 33.73 3.35
311 318 8.402798 ACATAACTCAGAGTGATATACAGAGG 57.597 38.462 3.05 0.00 32.59 3.69
316 323 7.750655 ACTCAGAGTGATATACAGAGGTATCA 58.249 38.462 0.91 0.00 40.61 2.15
319 326 9.237187 TCAGAGTGATATACAGAGGTATCATTC 57.763 37.037 8.81 8.81 41.01 2.67
348 355 8.825667 TTGAAACTTACCCTAAAATGATTTGC 57.174 30.769 0.00 0.00 0.00 3.68
349 356 7.957002 TGAAACTTACCCTAAAATGATTTGCA 58.043 30.769 0.00 0.00 0.00 4.08
350 357 7.870445 TGAAACTTACCCTAAAATGATTTGCAC 59.130 33.333 0.00 0.00 0.00 4.57
351 358 6.909550 ACTTACCCTAAAATGATTTGCACA 57.090 33.333 0.00 0.00 0.00 4.57
352 359 6.687604 ACTTACCCTAAAATGATTTGCACAC 58.312 36.000 0.00 0.00 0.00 3.82
353 360 6.493458 ACTTACCCTAAAATGATTTGCACACT 59.507 34.615 0.00 0.00 0.00 3.55
354 361 7.668052 ACTTACCCTAAAATGATTTGCACACTA 59.332 33.333 0.00 0.00 0.00 2.74
355 362 6.515272 ACCCTAAAATGATTTGCACACTAG 57.485 37.500 0.00 0.00 0.00 2.57
356 363 5.418840 ACCCTAAAATGATTTGCACACTAGG 59.581 40.000 0.00 4.76 0.00 3.02
357 364 5.418840 CCCTAAAATGATTTGCACACTAGGT 59.581 40.000 9.16 0.00 0.00 3.08
358 365 6.601613 CCCTAAAATGATTTGCACACTAGGTA 59.398 38.462 9.16 0.00 0.00 3.08
359 366 7.415206 CCCTAAAATGATTTGCACACTAGGTAC 60.415 40.741 9.16 0.00 0.00 3.34
360 367 5.545658 AAATGATTTGCACACTAGGTACG 57.454 39.130 0.00 0.00 0.00 3.67
361 368 3.671008 TGATTTGCACACTAGGTACGT 57.329 42.857 0.00 0.00 0.00 3.57
362 369 3.322369 TGATTTGCACACTAGGTACGTG 58.678 45.455 0.00 0.00 38.32 4.49
363 370 2.157834 TTTGCACACTAGGTACGTGG 57.842 50.000 0.00 0.00 36.71 4.94
377 384 2.521105 ACGTGGACTTGGTCAACTAC 57.479 50.000 4.07 0.00 34.57 2.73
379 386 3.225104 ACGTGGACTTGGTCAACTACTA 58.775 45.455 4.07 0.00 34.57 1.82
380 387 3.005155 ACGTGGACTTGGTCAACTACTAC 59.995 47.826 4.07 0.00 34.57 2.73
381 388 3.572584 GTGGACTTGGTCAACTACTACG 58.427 50.000 0.14 0.00 33.97 3.51
382 389 2.559668 TGGACTTGGTCAACTACTACGG 59.440 50.000 0.14 0.00 33.68 4.02
383 390 2.821969 GGACTTGGTCAACTACTACGGA 59.178 50.000 0.14 0.00 33.68 4.69
384 391 3.446516 GGACTTGGTCAACTACTACGGAT 59.553 47.826 0.14 0.00 33.68 4.18
385 392 4.081807 GGACTTGGTCAACTACTACGGATT 60.082 45.833 0.14 0.00 33.68 3.01
386 393 5.476614 GACTTGGTCAACTACTACGGATTT 58.523 41.667 0.00 0.00 32.09 2.17
387 394 5.235516 ACTTGGTCAACTACTACGGATTTG 58.764 41.667 0.00 0.00 0.00 2.32
388 395 3.592059 TGGTCAACTACTACGGATTTGC 58.408 45.455 0.00 0.00 0.00 3.68
389 396 3.007074 TGGTCAACTACTACGGATTTGCA 59.993 43.478 0.00 0.00 0.00 4.08
390 397 3.370061 GGTCAACTACTACGGATTTGCAC 59.630 47.826 0.00 0.00 0.00 4.57
391 398 3.991773 GTCAACTACTACGGATTTGCACA 59.008 43.478 0.00 0.00 0.00 4.57
392 399 3.991773 TCAACTACTACGGATTTGCACAC 59.008 43.478 0.00 0.00 0.00 3.82
393 400 2.968675 ACTACTACGGATTTGCACACC 58.031 47.619 0.00 0.00 0.00 4.16
394 401 2.565834 ACTACTACGGATTTGCACACCT 59.434 45.455 0.00 0.00 0.00 4.00
395 402 3.765511 ACTACTACGGATTTGCACACCTA 59.234 43.478 0.00 0.00 0.00 3.08
396 403 3.247006 ACTACGGATTTGCACACCTAG 57.753 47.619 0.00 0.00 0.00 3.02
397 404 2.093658 ACTACGGATTTGCACACCTAGG 60.094 50.000 7.41 7.41 0.00 3.02
398 405 0.690762 ACGGATTTGCACACCTAGGT 59.309 50.000 9.21 9.21 0.00 3.08
399 406 1.903860 ACGGATTTGCACACCTAGGTA 59.096 47.619 15.80 0.00 0.00 3.08
400 407 2.277084 CGGATTTGCACACCTAGGTAC 58.723 52.381 15.80 7.97 0.00 3.34
401 408 2.277084 GGATTTGCACACCTAGGTACG 58.723 52.381 15.80 9.80 0.00 3.67
402 409 1.664151 GATTTGCACACCTAGGTACGC 59.336 52.381 22.21 22.21 0.00 4.42
403 410 0.668096 TTTGCACACCTAGGTACGCG 60.668 55.000 22.96 3.53 0.00 6.01
404 411 2.202703 GCACACCTAGGTACGCGG 60.203 66.667 15.80 4.15 0.00 6.46
405 412 2.703798 GCACACCTAGGTACGCGGA 61.704 63.158 15.80 0.00 0.00 5.54
406 413 1.138247 CACACCTAGGTACGCGGAC 59.862 63.158 15.80 14.70 0.00 4.79
407 414 2.048603 ACACCTAGGTACGCGGACC 61.049 63.158 33.85 33.85 40.08 4.46
413 420 3.376078 GGTACGCGGACCTGGTCA 61.376 66.667 33.55 4.40 36.47 4.02
414 421 2.652530 GTACGCGGACCTGGTCAA 59.347 61.111 26.94 5.22 33.68 3.18
415 422 1.735559 GTACGCGGACCTGGTCAAC 60.736 63.158 26.94 16.99 33.68 3.18
416 423 1.904865 TACGCGGACCTGGTCAACT 60.905 57.895 26.94 9.51 33.68 3.16
417 424 0.608856 TACGCGGACCTGGTCAACTA 60.609 55.000 26.94 8.58 33.68 2.24
418 425 1.255667 ACGCGGACCTGGTCAACTAT 61.256 55.000 26.94 6.60 33.68 2.12
419 426 0.108329 CGCGGACCTGGTCAACTATT 60.108 55.000 26.94 0.00 33.68 1.73
420 427 1.135527 CGCGGACCTGGTCAACTATTA 59.864 52.381 26.94 0.00 33.68 0.98
421 428 2.798499 CGCGGACCTGGTCAACTATTAG 60.798 54.545 26.94 9.15 33.68 1.73
432 439 4.361420 GTCAACTATTAGACGGCTTCCTC 58.639 47.826 0.00 0.00 0.00 3.71
434 441 3.028094 ACTATTAGACGGCTTCCTCCA 57.972 47.619 0.00 0.00 0.00 3.86
444 451 1.900351 CTTCCTCCATCAGCGTGGA 59.100 57.895 8.02 8.02 45.78 4.02
449 456 1.611673 CCTCCATCAGCGTGGACTTTT 60.612 52.381 4.67 0.00 43.20 2.27
450 457 1.466167 CTCCATCAGCGTGGACTTTTG 59.534 52.381 4.67 0.00 43.20 2.44
451 458 0.109597 CCATCAGCGTGGACTTTTGC 60.110 55.000 0.12 0.00 42.02 3.68
452 459 0.109597 CATCAGCGTGGACTTTTGCC 60.110 55.000 0.00 0.00 0.00 4.52
453 460 0.537143 ATCAGCGTGGACTTTTGCCA 60.537 50.000 0.00 0.00 0.00 4.92
459 466 3.529948 TGGACTTTTGCCACATGGT 57.470 47.368 0.00 0.00 37.57 3.55
460 467 2.666272 TGGACTTTTGCCACATGGTA 57.334 45.000 0.00 0.00 37.57 3.25
461 468 2.950781 TGGACTTTTGCCACATGGTAA 58.049 42.857 0.00 0.00 38.03 2.85
462 469 2.625790 TGGACTTTTGCCACATGGTAAC 59.374 45.455 0.36 0.00 39.52 2.50
480 515 5.039333 GGTAACACGTACAGTACATGGATC 58.961 45.833 11.35 1.37 34.01 3.36
518 559 6.467677 TGTTCTAGCAGTTCTCTTTTGCTAT 58.532 36.000 5.95 0.00 46.05 2.97
531 572 5.636123 TCTTTTGCTATTCAACAGGGGTTA 58.364 37.500 0.00 0.00 34.18 2.85
534 575 4.919774 TGCTATTCAACAGGGGTTAGAA 57.080 40.909 0.00 0.00 34.87 2.10
537 578 5.191722 TGCTATTCAACAGGGGTTAGAATCT 59.808 40.000 0.00 0.00 36.75 2.40
679 729 1.216710 CACTTCCCAGAGTCCTCGC 59.783 63.158 0.00 0.00 34.09 5.03
694 744 1.096416 CTCGCGTCCTATCCTATCCC 58.904 60.000 5.77 0.00 0.00 3.85
725 775 2.039137 ACGAACCCCTCCCCTCTC 59.961 66.667 0.00 0.00 0.00 3.20
727 777 2.454941 GAACCCCTCCCCTCTCCA 59.545 66.667 0.00 0.00 0.00 3.86
752 802 2.525877 ACCTGTACACGGCACCCT 60.526 61.111 10.26 0.00 0.00 4.34
764 814 1.069935 GCACCCTAGAGCCGAATCC 59.930 63.158 0.00 0.00 0.00 3.01
766 816 1.048724 CACCCTAGAGCCGAATCCCA 61.049 60.000 0.00 0.00 0.00 4.37
767 817 0.326238 ACCCTAGAGCCGAATCCCAA 60.326 55.000 0.00 0.00 0.00 4.12
770 820 1.123928 CTAGAGCCGAATCCCAACCT 58.876 55.000 0.00 0.00 0.00 3.50
858 908 3.039011 CCCCCTCCACCTATATATTCCG 58.961 54.545 0.00 0.00 0.00 4.30
865 916 2.494471 CACCTATATATTCCGACCCGCA 59.506 50.000 0.00 0.00 0.00 5.69
970 1026 2.742372 CCGCGACCCAAACCAGAG 60.742 66.667 8.23 0.00 0.00 3.35
971 1027 3.423154 CGCGACCCAAACCAGAGC 61.423 66.667 0.00 0.00 0.00 4.09
972 1028 3.056328 GCGACCCAAACCAGAGCC 61.056 66.667 0.00 0.00 0.00 4.70
973 1029 2.359975 CGACCCAAACCAGAGCCC 60.360 66.667 0.00 0.00 0.00 5.19
974 1030 2.359975 GACCCAAACCAGAGCCCG 60.360 66.667 0.00 0.00 0.00 6.13
975 1031 4.660938 ACCCAAACCAGAGCCCGC 62.661 66.667 0.00 0.00 0.00 6.13
1652 1708 3.068873 AGGACATCGACAAGATCTAAGCC 59.931 47.826 0.00 0.00 37.52 4.35
1672 1732 1.683441 TTTTTCCTCCTCCCTCGCC 59.317 57.895 0.00 0.00 0.00 5.54
1707 1770 7.916450 GTGTTCTATTCTGTTCTAATAGCGTCT 59.084 37.037 0.00 0.00 37.02 4.18
1775 1852 0.531974 TCGTTGTGACTTGAGGTGCC 60.532 55.000 0.00 0.00 0.00 5.01
1787 1864 6.719370 TGACTTGAGGTGCCTAAATAATTGTT 59.281 34.615 0.00 0.00 0.00 2.83
1795 1872 8.860088 AGGTGCCTAAATAATTGTTGGATTATC 58.140 33.333 0.00 0.00 32.47 1.75
1833 1910 1.950828 TTGTTTGCAACAAGCCATGG 58.049 45.000 7.63 7.63 45.79 3.66
1834 1911 0.106335 TGTTTGCAACAAGCCATGGG 59.894 50.000 15.13 0.00 44.83 4.00
1835 1912 0.392336 GTTTGCAACAAGCCATGGGA 59.608 50.000 15.13 0.00 44.83 4.37
1840 1917 1.483415 GCAACAAGCCATGGGATGATT 59.517 47.619 15.13 0.00 37.23 2.57
1869 1946 7.710676 TTATGGTGTTAATATTGTGGCTTGT 57.289 32.000 0.00 0.00 0.00 3.16
1870 1947 5.384063 TGGTGTTAATATTGTGGCTTGTG 57.616 39.130 0.00 0.00 0.00 3.33
1871 1948 5.073428 TGGTGTTAATATTGTGGCTTGTGA 58.927 37.500 0.00 0.00 0.00 3.58
1872 1949 5.714333 TGGTGTTAATATTGTGGCTTGTGAT 59.286 36.000 0.00 0.00 0.00 3.06
1873 1950 6.035843 GGTGTTAATATTGTGGCTTGTGATG 58.964 40.000 0.00 0.00 0.00 3.07
1874 1951 6.350110 GGTGTTAATATTGTGGCTTGTGATGT 60.350 38.462 0.00 0.00 0.00 3.06
1875 1952 7.090173 GTGTTAATATTGTGGCTTGTGATGTT 58.910 34.615 0.00 0.00 0.00 2.71
1876 1953 8.240682 GTGTTAATATTGTGGCTTGTGATGTTA 58.759 33.333 0.00 0.00 0.00 2.41
1877 1954 8.965819 TGTTAATATTGTGGCTTGTGATGTTAT 58.034 29.630 0.00 0.00 0.00 1.89
1900 1977 2.420022 CTCCTTGATTGGTTTGCCGTAG 59.580 50.000 0.00 0.00 37.67 3.51
1908 1985 1.202952 TGGTTTGCCGTAGTTTGGGAT 60.203 47.619 0.00 0.00 37.67 3.85
1909 1986 1.471287 GGTTTGCCGTAGTTTGGGATC 59.529 52.381 0.00 0.00 0.00 3.36
1910 1987 2.433436 GTTTGCCGTAGTTTGGGATCT 58.567 47.619 0.00 0.00 0.00 2.75
1912 1989 2.107950 TGCCGTAGTTTGGGATCTTG 57.892 50.000 0.00 0.00 0.00 3.02
1914 1991 1.006832 CCGTAGTTTGGGATCTTGCG 58.993 55.000 0.00 0.00 0.00 4.85
1915 1992 1.006832 CGTAGTTTGGGATCTTGCGG 58.993 55.000 0.00 0.00 0.00 5.69
1948 2041 2.093500 TCTGATTGCACATTAGCGTCCT 60.093 45.455 0.00 0.00 37.31 3.85
1953 2046 4.875544 TTGCACATTAGCGTCCTTTATC 57.124 40.909 0.00 0.00 37.31 1.75
1957 2050 4.448060 GCACATTAGCGTCCTTTATCTACC 59.552 45.833 0.00 0.00 0.00 3.18
1959 2052 6.281405 CACATTAGCGTCCTTTATCTACCTT 58.719 40.000 0.00 0.00 0.00 3.50
1960 2053 6.201044 CACATTAGCGTCCTTTATCTACCTTG 59.799 42.308 0.00 0.00 0.00 3.61
1961 2054 5.927281 TTAGCGTCCTTTATCTACCTTGT 57.073 39.130 0.00 0.00 0.00 3.16
1962 2055 7.069085 ACATTAGCGTCCTTTATCTACCTTGTA 59.931 37.037 0.00 0.00 0.00 2.41
1963 2056 7.592885 TTAGCGTCCTTTATCTACCTTGTAT 57.407 36.000 0.00 0.00 0.00 2.29
1964 2057 5.844004 AGCGTCCTTTATCTACCTTGTATG 58.156 41.667 0.00 0.00 0.00 2.39
1965 2058 5.363005 AGCGTCCTTTATCTACCTTGTATGT 59.637 40.000 0.00 0.00 0.00 2.29
1966 2059 6.548622 AGCGTCCTTTATCTACCTTGTATGTA 59.451 38.462 0.00 0.00 0.00 2.29
1967 2060 7.232941 AGCGTCCTTTATCTACCTTGTATGTAT 59.767 37.037 0.00 0.00 0.00 2.29
1968 2061 8.517878 GCGTCCTTTATCTACCTTGTATGTATA 58.482 37.037 0.00 0.00 0.00 1.47
1981 2074 9.174166 ACCTTGTATGTATAAATTGAGGAACAC 57.826 33.333 6.10 0.00 0.00 3.32
1982 2075 9.396022 CCTTGTATGTATAAATTGAGGAACACT 57.604 33.333 0.00 0.00 0.00 3.55
1985 2078 9.173021 TGTATGTATAAATTGAGGAACACTTGG 57.827 33.333 0.00 0.00 0.00 3.61
1986 2079 9.174166 GTATGTATAAATTGAGGAACACTTGGT 57.826 33.333 0.00 0.00 0.00 3.67
1987 2080 8.650143 ATGTATAAATTGAGGAACACTTGGTT 57.350 30.769 0.00 0.00 44.10 3.67
2001 2094 4.199310 CACTTGGTTCTTTGTCCTCTTCA 58.801 43.478 0.00 0.00 0.00 3.02
2008 2101 6.607198 TGGTTCTTTGTCCTCTTCAAAAGAAT 59.393 34.615 11.34 0.00 37.02 2.40
2034 2127 8.691661 AACAATTATGTTCTGTCTACTGGTTT 57.308 30.769 0.00 0.00 46.78 3.27
2053 2146 7.093068 ACTGGTTTAAGTTCAAGGGACAAAAAT 60.093 33.333 0.00 0.00 0.00 1.82
2055 2148 7.550906 TGGTTTAAGTTCAAGGGACAAAAATTG 59.449 33.333 0.00 0.00 0.00 2.32
2056 2149 7.011950 GGTTTAAGTTCAAGGGACAAAAATTGG 59.988 37.037 0.00 0.00 34.12 3.16
2067 2165 8.893563 AGGGACAAAAATTGGAACTTATGATA 57.106 30.769 0.00 0.00 34.12 2.15
2068 2166 8.971073 AGGGACAAAAATTGGAACTTATGATAG 58.029 33.333 0.00 0.00 34.12 2.08
2069 2167 8.749354 GGGACAAAAATTGGAACTTATGATAGT 58.251 33.333 0.00 0.00 34.12 2.12
2092 2190 8.701908 AGTATAATGTTTCTGATGGCATCATT 57.298 30.769 28.91 20.66 38.85 2.57
2093 2191 9.139734 AGTATAATGTTTCTGATGGCATCATTT 57.860 29.630 28.91 17.02 38.85 2.32
2094 2192 9.188588 GTATAATGTTTCTGATGGCATCATTTG 57.811 33.333 28.91 18.12 38.85 2.32
2125 2226 8.094548 TCATGTTACTAGTTCTATGCTTTGTGT 58.905 33.333 0.00 0.00 0.00 3.72
2140 2241 6.572519 TGCTTTGTGTTCTTTCTGCTAATTT 58.427 32.000 0.00 0.00 0.00 1.82
2141 2242 6.476380 TGCTTTGTGTTCTTTCTGCTAATTTG 59.524 34.615 0.00 0.00 0.00 2.32
2144 2247 4.237724 GTGTTCTTTCTGCTAATTTGCCC 58.762 43.478 9.41 0.00 0.00 5.36
2148 2251 1.173043 TTCTGCTAATTTGCCCACGG 58.827 50.000 9.41 0.00 0.00 4.94
2153 2256 1.802508 GCTAATTTGCCCACGGATTGC 60.803 52.381 0.00 0.00 0.00 3.56
2156 2259 1.606885 ATTTGCCCACGGATTGCCAG 61.607 55.000 0.00 0.00 0.00 4.85
2158 2261 2.825836 GCCCACGGATTGCCAGAG 60.826 66.667 0.00 0.00 0.00 3.35
2175 2278 1.484240 AGAGGCAAAAGAGGAGGATCG 59.516 52.381 0.00 0.00 34.37 3.69
2179 2282 1.661341 CAAAAGAGGAGGATCGGCAG 58.339 55.000 0.00 0.00 34.37 4.85
2180 2283 0.543749 AAAAGAGGAGGATCGGCAGG 59.456 55.000 0.00 0.00 34.37 4.85
2181 2284 0.325671 AAAGAGGAGGATCGGCAGGA 60.326 55.000 0.00 0.00 34.37 3.86
2183 2286 0.325671 AGAGGAGGATCGGCAGGAAA 60.326 55.000 0.00 0.00 34.37 3.13
2185 2288 0.909610 AGGAGGATCGGCAGGAAACA 60.910 55.000 0.00 0.00 34.37 2.83
2186 2289 0.035439 GGAGGATCGGCAGGAAACAA 60.035 55.000 0.00 0.00 34.37 2.83
2189 2292 0.740737 GGATCGGCAGGAAACAATGG 59.259 55.000 0.00 0.00 0.00 3.16
2190 2293 1.681780 GGATCGGCAGGAAACAATGGA 60.682 52.381 0.00 0.00 0.00 3.41
2192 2295 3.476552 GATCGGCAGGAAACAATGGATA 58.523 45.455 0.00 0.00 0.00 2.59
2193 2296 3.358111 TCGGCAGGAAACAATGGATAA 57.642 42.857 0.00 0.00 0.00 1.75
2221 2400 6.893583 AGTTATGACTATCCTGTTGCTGATT 58.106 36.000 0.00 0.00 33.32 2.57
2227 2406 4.885907 ACTATCCTGTTGCTGATTCCATTG 59.114 41.667 0.00 0.00 0.00 2.82
2229 2408 3.499338 TCCTGTTGCTGATTCCATTGTT 58.501 40.909 0.00 0.00 0.00 2.83
2251 2435 3.795877 TGACGATGATCATGCTGCTTAA 58.204 40.909 14.30 0.00 0.00 1.85
2256 2440 5.221322 ACGATGATCATGCTGCTTAAGTCTA 60.221 40.000 14.30 0.00 0.00 2.59
2260 2444 4.392921 TCATGCTGCTTAAGTCTACCTC 57.607 45.455 4.02 0.00 0.00 3.85
2261 2445 4.026744 TCATGCTGCTTAAGTCTACCTCT 58.973 43.478 4.02 0.00 0.00 3.69
2262 2446 4.467795 TCATGCTGCTTAAGTCTACCTCTT 59.532 41.667 4.02 0.00 0.00 2.85
2287 2471 3.888323 TCTTTGTGCAGTTGGATTTGCTA 59.112 39.130 0.00 0.00 40.87 3.49
2289 2473 4.870123 TTGTGCAGTTGGATTTGCTATT 57.130 36.364 0.00 0.00 40.87 1.73
2290 2474 4.870123 TGTGCAGTTGGATTTGCTATTT 57.130 36.364 0.00 0.00 40.87 1.40
2330 2543 2.093973 AGGCAGTGTCCATAAAGAGACG 60.094 50.000 6.40 0.00 35.30 4.18
2347 3105 4.281182 AGAGACGGTGTCTATCAAAACAGT 59.719 41.667 5.94 0.00 43.53 3.55
2348 3106 4.307432 AGACGGTGTCTATCAAAACAGTG 58.693 43.478 0.00 0.00 41.51 3.66
2349 3107 4.038763 AGACGGTGTCTATCAAAACAGTGA 59.961 41.667 0.00 0.00 41.51 3.41
2350 3108 4.056050 ACGGTGTCTATCAAAACAGTGAC 58.944 43.478 0.00 0.00 0.00 3.67
2351 3109 4.055360 CGGTGTCTATCAAAACAGTGACA 58.945 43.478 0.00 0.00 32.91 3.58
2352 3110 4.509970 CGGTGTCTATCAAAACAGTGACAA 59.490 41.667 0.00 0.00 36.42 3.18
2353 3111 5.333339 CGGTGTCTATCAAAACAGTGACAAG 60.333 44.000 0.00 0.00 36.42 3.16
2355 3113 5.758296 GTGTCTATCAAAACAGTGACAAGGA 59.242 40.000 0.00 0.00 36.42 3.36
2356 3114 5.758296 TGTCTATCAAAACAGTGACAAGGAC 59.242 40.000 0.00 0.00 32.50 3.85
2357 3115 5.758296 GTCTATCAAAACAGTGACAAGGACA 59.242 40.000 0.00 0.00 0.00 4.02
2358 3116 6.428159 GTCTATCAAAACAGTGACAAGGACAT 59.572 38.462 0.00 0.00 0.00 3.06
2364 3143 5.443185 AACAGTGACAAGGACATTTGATG 57.557 39.130 0.00 0.00 0.00 3.07
2397 3176 4.739793 TGATTGAAGTTCAGGGGACAAAT 58.260 39.130 5.56 0.00 0.00 2.32
2410 3193 5.648092 CAGGGGACAAATTCTAACTTACTGG 59.352 44.000 0.00 0.00 0.00 4.00
2421 3204 5.123227 TCTAACTTACTGGTGCCATTATGC 58.877 41.667 0.00 0.00 0.00 3.14
2432 3215 2.068519 GCCATTATGCGACGATGATCA 58.931 47.619 0.00 0.00 0.00 2.92
2433 3216 2.480037 GCCATTATGCGACGATGATCAA 59.520 45.455 0.00 0.00 0.00 2.57
2434 3217 3.424039 GCCATTATGCGACGATGATCAAG 60.424 47.826 0.00 0.00 0.00 3.02
2435 3218 3.742882 CCATTATGCGACGATGATCAAGT 59.257 43.478 0.00 2.78 0.00 3.16
2436 3219 4.212004 CCATTATGCGACGATGATCAAGTT 59.788 41.667 0.00 0.00 0.00 2.66
2437 3220 5.405269 CCATTATGCGACGATGATCAAGTTA 59.595 40.000 0.00 0.00 0.00 2.24
2438 3221 5.883328 TTATGCGACGATGATCAAGTTAC 57.117 39.130 0.00 0.78 0.00 2.50
2439 3222 3.224884 TGCGACGATGATCAAGTTACA 57.775 42.857 0.00 3.34 0.00 2.41
2440 3223 2.921121 TGCGACGATGATCAAGTTACAC 59.079 45.455 0.00 0.00 0.00 2.90
2441 3224 3.179830 GCGACGATGATCAAGTTACACT 58.820 45.455 0.00 0.00 0.00 3.55
2442 3225 4.142556 TGCGACGATGATCAAGTTACACTA 60.143 41.667 0.00 0.00 0.00 2.74
2443 3226 4.976731 GCGACGATGATCAAGTTACACTAT 59.023 41.667 0.00 0.00 0.00 2.12
2444 3227 5.459107 GCGACGATGATCAAGTTACACTATT 59.541 40.000 0.00 0.00 0.00 1.73
2445 3228 6.019801 GCGACGATGATCAAGTTACACTATTT 60.020 38.462 0.00 0.00 0.00 1.40
2446 3229 7.464178 GCGACGATGATCAAGTTACACTATTTT 60.464 37.037 0.00 0.00 0.00 1.82
2447 3230 8.380644 CGACGATGATCAAGTTACACTATTTTT 58.619 33.333 0.00 0.00 0.00 1.94
2453 3236 9.461312 TGATCAAGTTACACTATTTTTATGCCT 57.539 29.630 0.00 0.00 0.00 4.75
2454 3237 9.937175 GATCAAGTTACACTATTTTTATGCCTC 57.063 33.333 0.00 0.00 0.00 4.70
2455 3238 8.276252 TCAAGTTACACTATTTTTATGCCTCC 57.724 34.615 0.00 0.00 0.00 4.30
2456 3239 7.338449 TCAAGTTACACTATTTTTATGCCTCCC 59.662 37.037 0.00 0.00 0.00 4.30
2457 3240 6.127101 AGTTACACTATTTTTATGCCTCCCC 58.873 40.000 0.00 0.00 0.00 4.81
2458 3241 4.881157 ACACTATTTTTATGCCTCCCCT 57.119 40.909 0.00 0.00 0.00 4.79
2459 3242 4.536765 ACACTATTTTTATGCCTCCCCTG 58.463 43.478 0.00 0.00 0.00 4.45
2460 3243 3.319122 CACTATTTTTATGCCTCCCCTGC 59.681 47.826 0.00 0.00 0.00 4.85
2461 3244 1.402787 ATTTTTATGCCTCCCCTGCG 58.597 50.000 0.00 0.00 0.00 5.18
2462 3245 0.039035 TTTTTATGCCTCCCCTGCGT 59.961 50.000 0.00 0.00 0.00 5.24
2463 3246 0.039035 TTTTATGCCTCCCCTGCGTT 59.961 50.000 0.00 0.00 0.00 4.84
2464 3247 0.393808 TTTATGCCTCCCCTGCGTTC 60.394 55.000 0.00 0.00 0.00 3.95
2465 3248 1.271840 TTATGCCTCCCCTGCGTTCT 61.272 55.000 0.00 0.00 0.00 3.01
2466 3249 1.271840 TATGCCTCCCCTGCGTTCTT 61.272 55.000 0.00 0.00 0.00 2.52
2467 3250 2.034221 GCCTCCCCTGCGTTCTTT 59.966 61.111 0.00 0.00 0.00 2.52
2468 3251 2.041115 GCCTCCCCTGCGTTCTTTC 61.041 63.158 0.00 0.00 0.00 2.62
2469 3252 1.679898 CCTCCCCTGCGTTCTTTCT 59.320 57.895 0.00 0.00 0.00 2.52
2470 3253 0.674895 CCTCCCCTGCGTTCTTTCTG 60.675 60.000 0.00 0.00 0.00 3.02
2471 3254 1.301677 CTCCCCTGCGTTCTTTCTGC 61.302 60.000 0.00 0.00 0.00 4.26
2472 3255 2.335712 CCCCTGCGTTCTTTCTGCC 61.336 63.158 0.00 0.00 0.00 4.85
2473 3256 1.600636 CCCTGCGTTCTTTCTGCCA 60.601 57.895 0.00 0.00 0.00 4.92
2474 3257 1.580845 CCCTGCGTTCTTTCTGCCAG 61.581 60.000 0.00 0.00 0.00 4.85
2475 3258 0.886490 CCTGCGTTCTTTCTGCCAGT 60.886 55.000 0.00 0.00 0.00 4.00
2476 3259 0.947244 CTGCGTTCTTTCTGCCAGTT 59.053 50.000 0.00 0.00 0.00 3.16
2477 3260 0.662619 TGCGTTCTTTCTGCCAGTTG 59.337 50.000 0.00 0.00 0.00 3.16
2478 3261 0.663153 GCGTTCTTTCTGCCAGTTGT 59.337 50.000 0.00 0.00 0.00 3.32
2479 3262 1.597937 GCGTTCTTTCTGCCAGTTGTG 60.598 52.381 0.00 0.00 0.00 3.33
2480 3263 1.597937 CGTTCTTTCTGCCAGTTGTGC 60.598 52.381 0.00 0.00 0.00 4.57
2481 3264 0.662619 TTCTTTCTGCCAGTTGTGCG 59.337 50.000 0.00 0.00 0.00 5.34
2482 3265 1.165907 TCTTTCTGCCAGTTGTGCGG 61.166 55.000 0.00 0.00 36.41 5.69
2483 3266 1.447317 CTTTCTGCCAGTTGTGCGGT 61.447 55.000 0.00 0.00 36.47 5.68
2484 3267 1.034838 TTTCTGCCAGTTGTGCGGTT 61.035 50.000 0.00 0.00 36.47 4.44
2485 3268 1.723608 TTCTGCCAGTTGTGCGGTTG 61.724 55.000 0.00 0.00 36.47 3.77
2486 3269 3.198236 CTGCCAGTTGTGCGGTTGG 62.198 63.158 0.00 0.00 0.00 3.77
2487 3270 2.904866 GCCAGTTGTGCGGTTGGA 60.905 61.111 0.00 0.00 32.34 3.53
2488 3271 2.268076 GCCAGTTGTGCGGTTGGAT 61.268 57.895 0.00 0.00 32.34 3.41
2489 3272 1.805428 GCCAGTTGTGCGGTTGGATT 61.805 55.000 0.00 0.00 32.34 3.01
2490 3273 0.039256 CCAGTTGTGCGGTTGGATTG 60.039 55.000 0.00 0.00 32.34 2.67
2491 3274 0.039256 CAGTTGTGCGGTTGGATTGG 60.039 55.000 0.00 0.00 0.00 3.16
2492 3275 1.372872 GTTGTGCGGTTGGATTGGC 60.373 57.895 0.00 0.00 0.00 4.52
2493 3276 1.530419 TTGTGCGGTTGGATTGGCT 60.530 52.632 0.00 0.00 0.00 4.75
2494 3277 1.804396 TTGTGCGGTTGGATTGGCTG 61.804 55.000 0.00 0.00 0.00 4.85
2495 3278 2.115052 TGCGGTTGGATTGGCTGT 59.885 55.556 0.00 0.00 0.00 4.40
2496 3279 1.530419 TGCGGTTGGATTGGCTGTT 60.530 52.632 0.00 0.00 0.00 3.16
2497 3280 1.112315 TGCGGTTGGATTGGCTGTTT 61.112 50.000 0.00 0.00 0.00 2.83
2498 3281 0.388520 GCGGTTGGATTGGCTGTTTC 60.389 55.000 0.00 0.00 0.00 2.78
2499 3282 0.958091 CGGTTGGATTGGCTGTTTCA 59.042 50.000 0.00 0.00 0.00 2.69
2500 3283 1.335872 CGGTTGGATTGGCTGTTTCAC 60.336 52.381 0.00 0.00 0.00 3.18
2501 3284 1.963515 GGTTGGATTGGCTGTTTCACT 59.036 47.619 0.00 0.00 0.00 3.41
2502 3285 2.029918 GGTTGGATTGGCTGTTTCACTC 60.030 50.000 0.00 0.00 0.00 3.51
2503 3286 2.622942 GTTGGATTGGCTGTTTCACTCA 59.377 45.455 0.00 0.00 0.00 3.41
2504 3287 2.942804 TGGATTGGCTGTTTCACTCAA 58.057 42.857 0.00 0.00 0.00 3.02
2505 3288 3.295093 TGGATTGGCTGTTTCACTCAAA 58.705 40.909 0.00 0.00 0.00 2.69
2506 3289 3.703556 TGGATTGGCTGTTTCACTCAAAA 59.296 39.130 0.00 0.00 0.00 2.44
2507 3290 4.202141 TGGATTGGCTGTTTCACTCAAAAG 60.202 41.667 0.00 0.00 0.00 2.27
2508 3291 4.202151 GGATTGGCTGTTTCACTCAAAAGT 60.202 41.667 0.00 0.00 35.60 2.66
2509 3292 5.009610 GGATTGGCTGTTTCACTCAAAAGTA 59.990 40.000 0.00 0.00 33.25 2.24
2510 3293 5.499139 TTGGCTGTTTCACTCAAAAGTAG 57.501 39.130 0.00 0.00 33.25 2.57
2511 3294 3.315191 TGGCTGTTTCACTCAAAAGTAGC 59.685 43.478 0.00 0.00 33.25 3.58
2512 3295 3.315191 GGCTGTTTCACTCAAAAGTAGCA 59.685 43.478 0.00 0.00 34.03 3.49
2513 3296 4.022849 GGCTGTTTCACTCAAAAGTAGCAT 60.023 41.667 0.00 0.00 34.03 3.79
2514 3297 5.149977 GCTGTTTCACTCAAAAGTAGCATC 58.850 41.667 0.00 0.00 33.25 3.91
2515 3298 5.689383 TGTTTCACTCAAAAGTAGCATCC 57.311 39.130 0.00 0.00 33.25 3.51
2516 3299 5.376625 TGTTTCACTCAAAAGTAGCATCCT 58.623 37.500 0.00 0.00 33.25 3.24
2517 3300 5.470098 TGTTTCACTCAAAAGTAGCATCCTC 59.530 40.000 0.00 0.00 33.25 3.71
2518 3301 4.207891 TCACTCAAAAGTAGCATCCTCC 57.792 45.455 0.00 0.00 33.25 4.30
2519 3302 2.932614 CACTCAAAAGTAGCATCCTCCG 59.067 50.000 0.00 0.00 33.25 4.63
2520 3303 2.567615 ACTCAAAAGTAGCATCCTCCGT 59.432 45.455 0.00 0.00 32.59 4.69
2521 3304 3.190874 CTCAAAAGTAGCATCCTCCGTC 58.809 50.000 0.00 0.00 0.00 4.79
2522 3305 2.093658 TCAAAAGTAGCATCCTCCGTCC 60.094 50.000 0.00 0.00 0.00 4.79
2523 3306 1.568504 AAAGTAGCATCCTCCGTCCA 58.431 50.000 0.00 0.00 0.00 4.02
2524 3307 1.115467 AAGTAGCATCCTCCGTCCAG 58.885 55.000 0.00 0.00 0.00 3.86
2525 3308 0.757188 AGTAGCATCCTCCGTCCAGG 60.757 60.000 0.00 0.00 42.97 4.45
2526 3309 2.134287 TAGCATCCTCCGTCCAGGC 61.134 63.158 0.00 0.00 40.77 4.85
2527 3310 2.589610 TAGCATCCTCCGTCCAGGCT 62.590 60.000 0.00 0.00 40.77 4.58
2528 3311 3.036429 GCATCCTCCGTCCAGGCTT 62.036 63.158 0.00 0.00 40.77 4.35
2529 3312 1.686325 GCATCCTCCGTCCAGGCTTA 61.686 60.000 0.00 0.00 40.77 3.09
2530 3313 0.830648 CATCCTCCGTCCAGGCTTAA 59.169 55.000 0.00 0.00 40.77 1.85
2531 3314 1.417890 CATCCTCCGTCCAGGCTTAAT 59.582 52.381 0.00 0.00 40.77 1.40
2532 3315 0.830648 TCCTCCGTCCAGGCTTAATG 59.169 55.000 0.00 0.00 40.77 1.90
2533 3316 0.541863 CCTCCGTCCAGGCTTAATGT 59.458 55.000 0.00 0.00 40.77 2.71
2534 3317 1.065418 CCTCCGTCCAGGCTTAATGTT 60.065 52.381 0.00 0.00 40.77 2.71
2535 3318 2.169769 CCTCCGTCCAGGCTTAATGTTA 59.830 50.000 0.00 0.00 40.77 2.41
2536 3319 3.181454 CCTCCGTCCAGGCTTAATGTTAT 60.181 47.826 0.00 0.00 40.77 1.89
2537 3320 4.451900 CTCCGTCCAGGCTTAATGTTATT 58.548 43.478 0.00 0.00 40.77 1.40
2538 3321 5.454187 CCTCCGTCCAGGCTTAATGTTATTA 60.454 44.000 0.00 0.00 40.77 0.98
2539 3322 5.991861 TCCGTCCAGGCTTAATGTTATTAA 58.008 37.500 0.00 0.00 40.77 1.40
2540 3323 5.818857 TCCGTCCAGGCTTAATGTTATTAAC 59.181 40.000 0.00 0.00 40.77 2.01
2541 3324 5.008316 CCGTCCAGGCTTAATGTTATTAACC 59.992 44.000 4.17 0.00 0.00 2.85
2542 3325 5.820947 CGTCCAGGCTTAATGTTATTAACCT 59.179 40.000 4.17 0.00 0.00 3.50
2543 3326 6.238374 CGTCCAGGCTTAATGTTATTAACCTG 60.238 42.308 20.93 20.93 42.47 4.00
2547 3330 8.514330 CAGGCTTAATGTTATTAACCTGGTAA 57.486 34.615 20.56 0.00 39.80 2.85
2548 3331 8.962679 CAGGCTTAATGTTATTAACCTGGTAAA 58.037 33.333 20.56 0.00 39.80 2.01
2549 3332 9.709387 AGGCTTAATGTTATTAACCTGGTAAAT 57.291 29.630 0.00 0.00 0.00 1.40
2563 3346 7.297936 ACCTGGTAAATTGAAGTTAAAAGGG 57.702 36.000 14.94 6.53 0.00 3.95
2564 3347 6.269077 ACCTGGTAAATTGAAGTTAAAAGGGG 59.731 38.462 14.94 5.25 0.00 4.79
2565 3348 6.495526 CCTGGTAAATTGAAGTTAAAAGGGGA 59.504 38.462 6.69 0.00 0.00 4.81
2566 3349 7.180229 CCTGGTAAATTGAAGTTAAAAGGGGAT 59.820 37.037 6.69 0.00 0.00 3.85
2567 3350 8.499288 TGGTAAATTGAAGTTAAAAGGGGATT 57.501 30.769 0.00 0.00 0.00 3.01
2568 3351 8.939932 TGGTAAATTGAAGTTAAAAGGGGATTT 58.060 29.630 0.00 0.00 0.00 2.17
2569 3352 9.787435 GGTAAATTGAAGTTAAAAGGGGATTTT 57.213 29.630 0.00 0.00 43.54 1.82
2572 3355 9.693739 AAATTGAAGTTAAAAGGGGATTTTTGT 57.306 25.926 0.00 0.00 41.40 2.83
2573 3356 8.675705 ATTGAAGTTAAAAGGGGATTTTTGTG 57.324 30.769 0.00 0.00 41.40 3.33
2574 3357 6.052360 TGAAGTTAAAAGGGGATTTTTGTGC 58.948 36.000 0.00 0.00 41.40 4.57
2575 3358 5.622346 AGTTAAAAGGGGATTTTTGTGCA 57.378 34.783 0.00 0.00 41.40 4.57
2576 3359 6.186420 AGTTAAAAGGGGATTTTTGTGCAT 57.814 33.333 0.00 0.00 41.40 3.96
2577 3360 7.309770 AGTTAAAAGGGGATTTTTGTGCATA 57.690 32.000 0.00 0.00 41.40 3.14
2578 3361 7.917003 AGTTAAAAGGGGATTTTTGTGCATAT 58.083 30.769 0.00 0.00 41.40 1.78
2579 3362 8.040727 AGTTAAAAGGGGATTTTTGTGCATATC 58.959 33.333 0.00 0.00 41.40 1.63
2580 3363 4.654091 AAGGGGATTTTTGTGCATATCG 57.346 40.909 0.00 0.00 0.00 2.92
2581 3364 3.897239 AGGGGATTTTTGTGCATATCGA 58.103 40.909 0.00 0.00 0.00 3.59
2582 3365 4.277476 AGGGGATTTTTGTGCATATCGAA 58.723 39.130 0.00 0.00 0.00 3.71
2583 3366 4.709397 AGGGGATTTTTGTGCATATCGAAA 59.291 37.500 0.00 0.00 0.00 3.46
2584 3367 5.043248 GGGGATTTTTGTGCATATCGAAAG 58.957 41.667 0.00 0.00 0.00 2.62
2603 3386 8.251750 TCGAAAGAACAATCCATTACTACTTG 57.748 34.615 0.00 0.00 37.03 3.16
2604 3387 7.333423 TCGAAAGAACAATCCATTACTACTTGG 59.667 37.037 0.00 0.00 37.03 3.61
2605 3388 7.119262 CGAAAGAACAATCCATTACTACTTGGT 59.881 37.037 0.00 0.00 34.48 3.67
2606 3389 8.706322 AAAGAACAATCCATTACTACTTGGTT 57.294 30.769 0.00 0.00 34.48 3.67
2607 3390 7.923414 AGAACAATCCATTACTACTTGGTTC 57.077 36.000 0.00 0.00 34.48 3.62
2608 3391 7.458397 AGAACAATCCATTACTACTTGGTTCA 58.542 34.615 0.00 0.00 34.48 3.18
2609 3392 7.607991 AGAACAATCCATTACTACTTGGTTCAG 59.392 37.037 0.00 0.00 34.48 3.02
2610 3393 6.180472 ACAATCCATTACTACTTGGTTCAGG 58.820 40.000 0.00 0.00 34.48 3.86
2611 3394 4.837093 TCCATTACTACTTGGTTCAGGG 57.163 45.455 0.00 0.00 34.48 4.45
2612 3395 4.431378 TCCATTACTACTTGGTTCAGGGA 58.569 43.478 0.00 0.00 34.48 4.20
2613 3396 4.469945 TCCATTACTACTTGGTTCAGGGAG 59.530 45.833 0.00 0.00 34.48 4.30
2614 3397 3.975168 TTACTACTTGGTTCAGGGAGC 57.025 47.619 0.00 0.00 0.00 4.70
2615 3398 1.729586 ACTACTTGGTTCAGGGAGCA 58.270 50.000 0.00 0.00 0.00 4.26
2616 3399 1.348036 ACTACTTGGTTCAGGGAGCAC 59.652 52.381 0.00 0.00 0.00 4.40
2617 3400 1.347707 CTACTTGGTTCAGGGAGCACA 59.652 52.381 0.00 0.00 0.00 4.57
2618 3401 0.550914 ACTTGGTTCAGGGAGCACAA 59.449 50.000 0.00 0.00 0.00 3.33
2619 3402 1.242076 CTTGGTTCAGGGAGCACAAG 58.758 55.000 0.00 0.00 0.00 3.16
2620 3403 0.843309 TTGGTTCAGGGAGCACAAGA 59.157 50.000 0.00 0.00 0.00 3.02
2621 3404 1.067295 TGGTTCAGGGAGCACAAGAT 58.933 50.000 0.00 0.00 0.00 2.40
2622 3405 2.265367 TGGTTCAGGGAGCACAAGATA 58.735 47.619 0.00 0.00 0.00 1.98
2623 3406 2.642311 TGGTTCAGGGAGCACAAGATAA 59.358 45.455 0.00 0.00 0.00 1.75
2624 3407 3.010420 GGTTCAGGGAGCACAAGATAAC 58.990 50.000 0.00 0.00 0.00 1.89
2625 3408 3.307762 GGTTCAGGGAGCACAAGATAACT 60.308 47.826 0.00 0.00 0.00 2.24
2626 3409 4.081087 GGTTCAGGGAGCACAAGATAACTA 60.081 45.833 0.00 0.00 0.00 2.24
2627 3410 4.737855 TCAGGGAGCACAAGATAACTAC 57.262 45.455 0.00 0.00 0.00 2.73
2628 3411 4.093743 TCAGGGAGCACAAGATAACTACA 58.906 43.478 0.00 0.00 0.00 2.74
2629 3412 4.716784 TCAGGGAGCACAAGATAACTACAT 59.283 41.667 0.00 0.00 0.00 2.29
2630 3413 5.897250 TCAGGGAGCACAAGATAACTACATA 59.103 40.000 0.00 0.00 0.00 2.29
2631 3414 6.554982 TCAGGGAGCACAAGATAACTACATAT 59.445 38.462 0.00 0.00 0.00 1.78
2632 3415 7.071196 TCAGGGAGCACAAGATAACTACATATT 59.929 37.037 0.00 0.00 0.00 1.28
2633 3416 8.367911 CAGGGAGCACAAGATAACTACATATTA 58.632 37.037 0.00 0.00 0.00 0.98
2634 3417 8.368668 AGGGAGCACAAGATAACTACATATTAC 58.631 37.037 0.00 0.00 0.00 1.89
2635 3418 8.368668 GGGAGCACAAGATAACTACATATTACT 58.631 37.037 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.685828 GTTCTATAAAAATGCAAACACAACCTA 57.314 29.630 0.00 0.00 0.00 3.08
1 2 7.655732 GGTTCTATAAAAATGCAAACACAACCT 59.344 33.333 0.00 0.00 0.00 3.50
2 3 7.655732 AGGTTCTATAAAAATGCAAACACAACC 59.344 33.333 0.00 0.00 0.00 3.77
3 4 8.587952 AGGTTCTATAAAAATGCAAACACAAC 57.412 30.769 0.00 0.00 0.00 3.32
4 5 9.255304 GAAGGTTCTATAAAAATGCAAACACAA 57.745 29.630 0.00 0.00 0.00 3.33
5 6 8.637986 AGAAGGTTCTATAAAAATGCAAACACA 58.362 29.630 0.00 0.00 35.34 3.72
6 7 9.476202 AAGAAGGTTCTATAAAAATGCAAACAC 57.524 29.630 0.00 0.00 36.28 3.32
11 12 8.739972 GGAGAAAGAAGGTTCTATAAAAATGCA 58.260 33.333 0.00 0.00 37.98 3.96
12 13 7.910683 CGGAGAAAGAAGGTTCTATAAAAATGC 59.089 37.037 0.00 0.00 37.98 3.56
13 14 7.910683 GCGGAGAAAGAAGGTTCTATAAAAATG 59.089 37.037 0.00 0.00 37.98 2.32
14 15 7.610305 TGCGGAGAAAGAAGGTTCTATAAAAAT 59.390 33.333 0.00 0.00 37.98 1.82
15 16 6.938030 TGCGGAGAAAGAAGGTTCTATAAAAA 59.062 34.615 0.00 0.00 37.98 1.94
16 17 6.469410 TGCGGAGAAAGAAGGTTCTATAAAA 58.531 36.000 0.00 0.00 37.98 1.52
17 18 6.045072 TGCGGAGAAAGAAGGTTCTATAAA 57.955 37.500 0.00 0.00 37.98 1.40
18 19 5.670792 TGCGGAGAAAGAAGGTTCTATAA 57.329 39.130 0.00 0.00 37.98 0.98
19 20 5.670792 TTGCGGAGAAAGAAGGTTCTATA 57.329 39.130 0.00 0.00 37.98 1.31
20 21 4.553330 TTGCGGAGAAAGAAGGTTCTAT 57.447 40.909 0.00 0.00 37.98 1.98
21 22 4.345859 TTTGCGGAGAAAGAAGGTTCTA 57.654 40.909 0.00 0.00 37.98 2.10
22 23 2.930826 TTGCGGAGAAAGAAGGTTCT 57.069 45.000 0.00 0.00 40.62 3.01
23 24 3.119814 GGATTTGCGGAGAAAGAAGGTTC 60.120 47.826 0.00 0.00 0.00 3.62
24 25 2.820197 GGATTTGCGGAGAAAGAAGGTT 59.180 45.455 0.00 0.00 0.00 3.50
25 26 2.437413 GGATTTGCGGAGAAAGAAGGT 58.563 47.619 0.00 0.00 0.00 3.50
26 27 1.745653 GGGATTTGCGGAGAAAGAAGG 59.254 52.381 0.00 0.00 0.00 3.46
27 28 2.716217 AGGGATTTGCGGAGAAAGAAG 58.284 47.619 0.00 0.00 0.00 2.85
28 29 2.879103 AGGGATTTGCGGAGAAAGAA 57.121 45.000 0.00 0.00 0.00 2.52
29 30 3.992943 TTAGGGATTTGCGGAGAAAGA 57.007 42.857 0.00 0.00 0.00 2.52
30 31 4.884164 AGATTTAGGGATTTGCGGAGAAAG 59.116 41.667 0.00 0.00 0.00 2.62
31 32 4.855340 AGATTTAGGGATTTGCGGAGAAA 58.145 39.130 0.00 0.00 0.00 2.52
32 33 4.503714 AGATTTAGGGATTTGCGGAGAA 57.496 40.909 0.00 0.00 0.00 2.87
33 34 5.825593 ATAGATTTAGGGATTTGCGGAGA 57.174 39.130 0.00 0.00 0.00 3.71
34 35 8.567285 AATTATAGATTTAGGGATTTGCGGAG 57.433 34.615 0.00 0.00 0.00 4.63
37 38 9.774742 GCTTAATTATAGATTTAGGGATTTGCG 57.225 33.333 0.00 0.00 0.00 4.85
83 84 0.245813 GTCCACTAGACGGGGTGAAC 59.754 60.000 0.00 0.00 35.30 3.18
92 93 2.157279 CGATCGATACGGTCCACTAGAC 59.843 54.545 10.26 0.00 45.51 2.59
110 117 0.618981 GGAGGGGAAGGTGAAACGAT 59.381 55.000 0.00 0.00 38.12 3.73
122 129 2.015726 GAGGGAGAGGAGGAGGGGA 61.016 68.421 0.00 0.00 0.00 4.81
150 157 1.227089 CTTGCCGATGACCTCCTCG 60.227 63.158 0.00 0.00 34.73 4.63
179 186 2.700347 CGTCGTTACCGTCACGCAC 61.700 63.158 0.22 0.42 37.57 5.34
180 187 2.186350 ATCGTCGTTACCGTCACGCA 62.186 55.000 0.22 0.00 37.57 5.24
181 188 1.512734 ATCGTCGTTACCGTCACGC 60.513 57.895 0.22 0.00 37.57 5.34
204 211 2.386661 ATGATGGACCGAAGTGACAC 57.613 50.000 0.00 0.00 0.00 3.67
212 219 3.596310 TCAAACGTAATGATGGACCGA 57.404 42.857 0.00 0.00 0.00 4.69
213 220 4.399978 GTTTCAAACGTAATGATGGACCG 58.600 43.478 4.96 0.00 0.00 4.79
214 221 4.380128 GGGTTTCAAACGTAATGATGGACC 60.380 45.833 15.84 15.84 0.00 4.46
215 222 4.216687 TGGGTTTCAAACGTAATGATGGAC 59.783 41.667 4.96 5.15 0.00 4.02
216 223 4.399219 TGGGTTTCAAACGTAATGATGGA 58.601 39.130 4.96 0.00 0.00 3.41
226 233 7.862372 CCAATATTCATATCTGGGTTTCAAACG 59.138 37.037 0.00 0.00 0.00 3.60
236 243 6.487668 TCACACTTGCCAATATTCATATCTGG 59.512 38.462 0.00 0.00 0.00 3.86
239 246 8.158169 TCTTCACACTTGCCAATATTCATATC 57.842 34.615 0.00 0.00 0.00 1.63
242 249 8.523915 TTATCTTCACACTTGCCAATATTCAT 57.476 30.769 0.00 0.00 0.00 2.57
243 250 7.936496 TTATCTTCACACTTGCCAATATTCA 57.064 32.000 0.00 0.00 0.00 2.57
247 254 7.446931 TGAGTTTTATCTTCACACTTGCCAATA 59.553 33.333 0.00 0.00 0.00 1.90
251 258 5.470098 TCTGAGTTTTATCTTCACACTTGCC 59.530 40.000 0.00 0.00 0.00 4.52
255 262 6.652481 CCACATCTGAGTTTTATCTTCACACT 59.348 38.462 0.00 0.00 0.00 3.55
256 263 6.650807 TCCACATCTGAGTTTTATCTTCACAC 59.349 38.462 0.00 0.00 0.00 3.82
270 277 4.940046 AGTTATGTTGCTTCCACATCTGAG 59.060 41.667 0.00 0.00 0.00 3.35
271 278 4.910195 AGTTATGTTGCTTCCACATCTGA 58.090 39.130 0.00 0.00 0.00 3.27
276 283 4.202357 ACTCTGAGTTATGTTGCTTCCACA 60.202 41.667 4.06 0.00 0.00 4.17
309 316 9.628500 GGGTAAGTTTCAAATAGAATGATACCT 57.372 33.333 0.00 0.00 37.63 3.08
310 317 9.628500 AGGGTAAGTTTCAAATAGAATGATACC 57.372 33.333 0.00 0.00 37.23 2.73
329 336 6.924111 AGTGTGCAAATCATTTTAGGGTAAG 58.076 36.000 0.00 0.00 0.00 2.34
337 344 5.472137 ACGTACCTAGTGTGCAAATCATTTT 59.528 36.000 0.00 0.00 0.00 1.82
338 345 5.001232 ACGTACCTAGTGTGCAAATCATTT 58.999 37.500 0.00 0.00 0.00 2.32
340 347 3.932710 CACGTACCTAGTGTGCAAATCAT 59.067 43.478 0.00 0.00 35.08 2.45
345 352 1.000060 GTCCACGTACCTAGTGTGCAA 60.000 52.381 0.00 0.00 37.88 4.08
346 353 0.599558 GTCCACGTACCTAGTGTGCA 59.400 55.000 0.00 0.00 37.88 4.57
347 354 0.886563 AGTCCACGTACCTAGTGTGC 59.113 55.000 0.00 0.00 37.88 4.57
348 355 2.352421 CCAAGTCCACGTACCTAGTGTG 60.352 54.545 0.00 0.00 37.88 3.82
349 356 1.891150 CCAAGTCCACGTACCTAGTGT 59.109 52.381 0.00 0.00 37.88 3.55
350 357 1.891150 ACCAAGTCCACGTACCTAGTG 59.109 52.381 0.00 0.00 39.19 2.74
351 358 2.165998 GACCAAGTCCACGTACCTAGT 58.834 52.381 0.00 0.00 0.00 2.57
352 359 2.165167 TGACCAAGTCCACGTACCTAG 58.835 52.381 0.00 0.00 0.00 3.02
353 360 2.291209 TGACCAAGTCCACGTACCTA 57.709 50.000 0.00 0.00 0.00 3.08
354 361 1.069668 GTTGACCAAGTCCACGTACCT 59.930 52.381 0.00 0.00 0.00 3.08
355 362 1.069668 AGTTGACCAAGTCCACGTACC 59.930 52.381 0.00 0.00 34.10 3.34
356 363 2.521105 AGTTGACCAAGTCCACGTAC 57.479 50.000 0.00 0.00 34.10 3.67
357 364 3.225104 AGTAGTTGACCAAGTCCACGTA 58.775 45.455 0.00 0.00 34.10 3.57
358 365 2.037144 AGTAGTTGACCAAGTCCACGT 58.963 47.619 0.00 0.00 34.10 4.49
359 366 2.814280 AGTAGTTGACCAAGTCCACG 57.186 50.000 0.00 0.00 34.10 4.94
360 367 3.572584 CGTAGTAGTTGACCAAGTCCAC 58.427 50.000 0.00 0.00 0.00 4.02
361 368 2.559668 CCGTAGTAGTTGACCAAGTCCA 59.440 50.000 0.00 0.00 0.00 4.02
362 369 2.821969 TCCGTAGTAGTTGACCAAGTCC 59.178 50.000 0.00 0.00 0.00 3.85
363 370 4.715527 ATCCGTAGTAGTTGACCAAGTC 57.284 45.455 0.00 0.00 0.00 3.01
377 384 2.093658 ACCTAGGTGTGCAAATCCGTAG 60.094 50.000 15.42 0.00 0.00 3.51
379 386 0.690762 ACCTAGGTGTGCAAATCCGT 59.309 50.000 15.42 0.00 0.00 4.69
380 387 2.277084 GTACCTAGGTGTGCAAATCCG 58.723 52.381 25.33 0.00 0.00 4.18
381 388 2.277084 CGTACCTAGGTGTGCAAATCC 58.723 52.381 25.33 0.00 0.00 3.01
382 389 1.664151 GCGTACCTAGGTGTGCAAATC 59.336 52.381 25.33 1.29 32.42 2.17
383 390 1.734163 GCGTACCTAGGTGTGCAAAT 58.266 50.000 25.33 0.00 32.42 2.32
384 391 0.668096 CGCGTACCTAGGTGTGCAAA 60.668 55.000 28.86 8.14 32.42 3.68
385 392 1.080366 CGCGTACCTAGGTGTGCAA 60.080 57.895 28.86 8.80 32.42 4.08
386 393 2.569657 CGCGTACCTAGGTGTGCA 59.430 61.111 28.86 9.15 32.42 4.57
387 394 2.202703 CCGCGTACCTAGGTGTGC 60.203 66.667 25.33 24.15 0.00 4.57
388 395 1.138247 GTCCGCGTACCTAGGTGTG 59.862 63.158 25.33 16.86 0.00 3.82
389 396 2.048603 GGTCCGCGTACCTAGGTGT 61.049 63.158 25.33 0.02 36.53 4.16
390 397 2.803479 GGTCCGCGTACCTAGGTG 59.197 66.667 25.33 9.89 36.53 4.00
396 403 2.934570 TTGACCAGGTCCGCGTACC 61.935 63.158 13.76 13.76 40.06 3.34
397 404 1.735559 GTTGACCAGGTCCGCGTAC 60.736 63.158 17.59 0.00 0.00 3.67
398 405 0.608856 TAGTTGACCAGGTCCGCGTA 60.609 55.000 17.59 0.81 0.00 4.42
399 406 1.255667 ATAGTTGACCAGGTCCGCGT 61.256 55.000 17.59 1.79 0.00 6.01
400 407 0.108329 AATAGTTGACCAGGTCCGCG 60.108 55.000 17.59 0.00 0.00 6.46
401 408 2.429610 TCTAATAGTTGACCAGGTCCGC 59.570 50.000 17.59 9.57 0.00 5.54
402 409 3.488721 CGTCTAATAGTTGACCAGGTCCG 60.489 52.174 17.59 5.22 0.00 4.79
403 410 3.181478 CCGTCTAATAGTTGACCAGGTCC 60.181 52.174 17.59 2.24 0.00 4.46
404 411 3.737355 GCCGTCTAATAGTTGACCAGGTC 60.737 52.174 13.35 13.35 0.00 3.85
405 412 2.167900 GCCGTCTAATAGTTGACCAGGT 59.832 50.000 0.00 0.00 0.00 4.00
406 413 2.431057 AGCCGTCTAATAGTTGACCAGG 59.569 50.000 0.00 0.00 0.00 4.45
407 414 3.802948 AGCCGTCTAATAGTTGACCAG 57.197 47.619 0.00 0.00 0.00 4.00
408 415 3.118884 GGAAGCCGTCTAATAGTTGACCA 60.119 47.826 0.00 0.00 0.00 4.02
409 416 3.132467 AGGAAGCCGTCTAATAGTTGACC 59.868 47.826 0.00 0.00 0.00 4.02
410 417 4.361420 GAGGAAGCCGTCTAATAGTTGAC 58.639 47.826 0.00 0.00 0.00 3.18
411 418 3.383825 GGAGGAAGCCGTCTAATAGTTGA 59.616 47.826 0.00 0.00 0.00 3.18
412 419 3.132289 TGGAGGAAGCCGTCTAATAGTTG 59.868 47.826 0.00 0.00 0.00 3.16
413 420 3.371965 TGGAGGAAGCCGTCTAATAGTT 58.628 45.455 0.00 0.00 0.00 2.24
414 421 3.028094 TGGAGGAAGCCGTCTAATAGT 57.972 47.619 0.00 0.00 0.00 2.12
415 422 3.574396 TGATGGAGGAAGCCGTCTAATAG 59.426 47.826 0.00 0.00 43.08 1.73
416 423 3.572642 TGATGGAGGAAGCCGTCTAATA 58.427 45.455 0.00 0.00 43.08 0.98
417 424 2.366916 CTGATGGAGGAAGCCGTCTAAT 59.633 50.000 0.00 0.00 43.08 1.73
418 425 1.757118 CTGATGGAGGAAGCCGTCTAA 59.243 52.381 0.00 0.00 43.08 2.10
419 426 1.403814 CTGATGGAGGAAGCCGTCTA 58.596 55.000 0.00 0.00 43.08 2.59
420 427 1.965754 GCTGATGGAGGAAGCCGTCT 61.966 60.000 0.00 0.00 43.08 4.18
421 428 1.522580 GCTGATGGAGGAAGCCGTC 60.523 63.158 0.00 0.00 42.99 4.79
432 439 0.109597 GCAAAAGTCCACGCTGATGG 60.110 55.000 0.00 0.00 41.57 3.51
434 441 0.537143 TGGCAAAAGTCCACGCTGAT 60.537 50.000 0.00 0.00 0.00 2.90
444 451 2.034053 CGTGTTACCATGTGGCAAAAGT 59.966 45.455 0.00 0.00 39.32 2.66
449 456 1.070289 TGTACGTGTTACCATGTGGCA 59.930 47.619 0.00 0.00 40.96 4.92
450 457 1.730064 CTGTACGTGTTACCATGTGGC 59.270 52.381 0.00 0.00 40.96 5.01
451 458 3.034721 ACTGTACGTGTTACCATGTGG 57.965 47.619 0.00 0.00 40.96 4.17
452 459 4.548494 TGTACTGTACGTGTTACCATGTG 58.452 43.478 12.87 0.00 40.96 3.21
453 460 4.852134 TGTACTGTACGTGTTACCATGT 57.148 40.909 12.87 0.00 43.24 3.21
454 461 4.565166 CCATGTACTGTACGTGTTACCATG 59.435 45.833 28.75 16.91 42.68 3.66
456 463 3.825585 TCCATGTACTGTACGTGTTACCA 59.174 43.478 28.75 11.78 42.68 3.25
457 464 4.439305 TCCATGTACTGTACGTGTTACC 57.561 45.455 28.75 1.10 42.68 2.85
458 465 5.039333 GGATCCATGTACTGTACGTGTTAC 58.961 45.833 28.75 20.70 42.68 2.50
459 466 4.201940 CGGATCCATGTACTGTACGTGTTA 60.202 45.833 28.75 20.44 42.68 2.41
460 467 3.428452 CGGATCCATGTACTGTACGTGTT 60.428 47.826 28.75 19.87 42.68 3.32
461 468 2.098607 CGGATCCATGTACTGTACGTGT 59.901 50.000 28.75 17.31 42.68 4.49
462 469 2.098607 ACGGATCCATGTACTGTACGTG 59.901 50.000 26.00 26.00 43.59 4.49
463 470 2.372264 ACGGATCCATGTACTGTACGT 58.628 47.619 13.41 9.99 0.00 3.57
464 471 3.431922 AACGGATCCATGTACTGTACG 57.568 47.619 13.41 1.63 0.00 3.67
465 472 3.308866 GCAAACGGATCCATGTACTGTAC 59.691 47.826 13.41 10.98 0.00 2.90
474 509 1.005924 AGGAAAGGCAAACGGATCCAT 59.994 47.619 13.41 0.00 0.00 3.41
480 515 1.318576 AGAACAGGAAAGGCAAACGG 58.681 50.000 0.00 0.00 0.00 4.44
518 559 7.116736 GGAATAAGATTCTAACCCCTGTTGAA 58.883 38.462 0.00 0.00 35.87 2.69
534 575 7.976175 GCCTTCTTTTCGATTTTGGAATAAGAT 59.024 33.333 0.00 0.00 0.00 2.40
537 578 7.090173 CAGCCTTCTTTTCGATTTTGGAATAA 58.910 34.615 0.00 0.00 0.00 1.40
679 729 1.321074 GGGCGGGATAGGATAGGACG 61.321 65.000 0.00 0.00 0.00 4.79
725 775 1.918293 TGTACAGGTGGGCCTCTGG 60.918 63.158 23.94 12.10 44.97 3.86
727 777 2.283529 CGTGTACAGGTGGGCCTCT 61.284 63.158 4.53 0.00 44.97 3.69
738 788 1.601419 GCTCTAGGGTGCCGTGTACA 61.601 60.000 0.00 0.00 0.00 2.90
740 790 2.056223 GGCTCTAGGGTGCCGTGTA 61.056 63.158 6.58 0.00 41.35 2.90
752 802 1.485066 GAAGGTTGGGATTCGGCTCTA 59.515 52.381 0.00 0.00 0.00 2.43
764 814 1.214305 TGGGAGGGATGGAAGGTTGG 61.214 60.000 0.00 0.00 0.00 3.77
766 816 0.704664 GTTGGGAGGGATGGAAGGTT 59.295 55.000 0.00 0.00 0.00 3.50
767 817 1.214992 GGTTGGGAGGGATGGAAGGT 61.215 60.000 0.00 0.00 0.00 3.50
770 820 0.423956 TAGGGTTGGGAGGGATGGAA 59.576 55.000 0.00 0.00 0.00 3.53
901 952 4.554036 GAGATGGGGAGCGGTGGC 62.554 72.222 0.00 0.00 40.37 5.01
1765 1842 6.152661 TCCAACAATTATTTAGGCACCTCAAG 59.847 38.462 0.00 0.00 0.00 3.02
1787 1864 2.925578 ACGACGAACACGATAATCCA 57.074 45.000 0.00 0.00 34.70 3.41
1795 1872 7.098126 GCAAACAATAATAATACGACGAACACG 60.098 37.037 0.00 0.00 0.00 4.49
1855 1932 8.752005 AGTATAACATCACAAGCCACAATATT 57.248 30.769 0.00 0.00 0.00 1.28
1862 1939 5.045942 TCAAGGAGTATAACATCACAAGCCA 60.046 40.000 0.00 0.00 0.00 4.75
1863 1940 5.428253 TCAAGGAGTATAACATCACAAGCC 58.572 41.667 0.00 0.00 0.00 4.35
1864 1941 7.412853 CAATCAAGGAGTATAACATCACAAGC 58.587 38.462 0.00 0.00 0.00 4.01
1865 1942 7.554118 ACCAATCAAGGAGTATAACATCACAAG 59.446 37.037 0.00 0.00 0.00 3.16
1866 1943 7.402054 ACCAATCAAGGAGTATAACATCACAA 58.598 34.615 0.00 0.00 0.00 3.33
1868 1945 7.865706 AACCAATCAAGGAGTATAACATCAC 57.134 36.000 0.00 0.00 0.00 3.06
1869 1946 7.148086 GCAAACCAATCAAGGAGTATAACATCA 60.148 37.037 0.00 0.00 0.00 3.07
1870 1947 7.196331 GCAAACCAATCAAGGAGTATAACATC 58.804 38.462 0.00 0.00 0.00 3.06
1871 1948 6.096846 GGCAAACCAATCAAGGAGTATAACAT 59.903 38.462 0.00 0.00 35.26 2.71
1872 1949 5.417580 GGCAAACCAATCAAGGAGTATAACA 59.582 40.000 0.00 0.00 35.26 2.41
1873 1950 5.448632 CGGCAAACCAATCAAGGAGTATAAC 60.449 44.000 0.00 0.00 34.57 1.89
1874 1951 4.638421 CGGCAAACCAATCAAGGAGTATAA 59.362 41.667 0.00 0.00 34.57 0.98
1875 1952 4.196193 CGGCAAACCAATCAAGGAGTATA 58.804 43.478 0.00 0.00 34.57 1.47
1876 1953 3.016736 CGGCAAACCAATCAAGGAGTAT 58.983 45.455 0.00 0.00 34.57 2.12
1877 1954 2.224670 ACGGCAAACCAATCAAGGAGTA 60.225 45.455 0.00 0.00 34.57 2.59
1878 1955 1.247567 CGGCAAACCAATCAAGGAGT 58.752 50.000 0.00 0.00 34.57 3.85
1900 1977 1.657751 GCTCCCGCAAGATCCCAAAC 61.658 60.000 0.00 0.00 43.02 2.93
1908 1985 3.031736 AGATTAGTAAGCTCCCGCAAGA 58.968 45.455 0.00 0.00 43.02 3.02
1909 1986 3.126831 CAGATTAGTAAGCTCCCGCAAG 58.873 50.000 0.00 0.00 39.10 4.01
1910 1987 2.764010 TCAGATTAGTAAGCTCCCGCAA 59.236 45.455 0.00 0.00 39.10 4.85
1912 1989 3.669251 ATCAGATTAGTAAGCTCCCGC 57.331 47.619 0.00 0.00 0.00 6.13
1914 1991 4.513318 GTGCAATCAGATTAGTAAGCTCCC 59.487 45.833 0.00 0.00 0.00 4.30
1915 1992 5.118990 TGTGCAATCAGATTAGTAAGCTCC 58.881 41.667 0.00 0.00 0.00 4.70
1931 2024 5.126067 AGATAAAGGACGCTAATGTGCAAT 58.874 37.500 0.00 0.00 31.86 3.56
1959 2052 9.173021 CCAAGTGTTCCTCAATTTATACATACA 57.827 33.333 0.00 0.00 31.76 2.29
1960 2053 9.174166 ACCAAGTGTTCCTCAATTTATACATAC 57.826 33.333 0.00 0.00 31.76 2.39
1961 2054 9.747898 AACCAAGTGTTCCTCAATTTATACATA 57.252 29.630 0.00 0.00 31.76 2.29
1962 2055 8.650143 AACCAAGTGTTCCTCAATTTATACAT 57.350 30.769 0.00 0.00 31.76 2.29
1963 2056 8.106247 GAACCAAGTGTTCCTCAATTTATACA 57.894 34.615 0.00 0.00 46.35 2.29
1977 2070 4.236527 AGAGGACAAAGAACCAAGTGTT 57.763 40.909 0.00 0.00 40.81 3.32
1978 2071 3.933861 AGAGGACAAAGAACCAAGTGT 57.066 42.857 0.00 0.00 0.00 3.55
1979 2072 4.199310 TGAAGAGGACAAAGAACCAAGTG 58.801 43.478 0.00 0.00 0.00 3.16
1980 2073 4.503714 TGAAGAGGACAAAGAACCAAGT 57.496 40.909 0.00 0.00 0.00 3.16
1981 2074 5.835113 TTTGAAGAGGACAAAGAACCAAG 57.165 39.130 0.00 0.00 34.03 3.61
1982 2075 5.949354 TCTTTTGAAGAGGACAAAGAACCAA 59.051 36.000 0.00 0.00 38.25 3.67
1983 2076 5.505780 TCTTTTGAAGAGGACAAAGAACCA 58.494 37.500 0.00 0.00 38.25 3.67
1984 2077 6.451064 TTCTTTTGAAGAGGACAAAGAACC 57.549 37.500 2.53 0.00 39.03 3.62
1985 2078 9.452065 GTTATTCTTTTGAAGAGGACAAAGAAC 57.548 33.333 7.83 0.00 42.30 3.01
1986 2079 9.184523 TGTTATTCTTTTGAAGAGGACAAAGAA 57.815 29.630 8.05 8.05 42.30 2.52
1987 2080 8.746052 TGTTATTCTTTTGAAGAGGACAAAGA 57.254 30.769 0.00 0.00 42.30 2.52
1988 2081 9.971922 ATTGTTATTCTTTTGAAGAGGACAAAG 57.028 29.630 13.97 0.00 42.30 2.77
2008 2101 9.787435 AAACCAGTAGACAGAACATAATTGTTA 57.213 29.630 0.00 0.00 46.01 2.41
2025 2118 5.617252 TGTCCCTTGAACTTAAACCAGTAG 58.383 41.667 0.00 0.00 0.00 2.57
2031 2124 7.766738 TCCAATTTTTGTCCCTTGAACTTAAAC 59.233 33.333 0.00 0.00 0.00 2.01
2034 2127 7.125053 AGTTCCAATTTTTGTCCCTTGAACTTA 59.875 33.333 0.00 0.00 0.00 2.24
2067 2165 8.701908 AATGATGCCATCAGAAACATTATACT 57.298 30.769 13.60 0.00 43.53 2.12
2068 2166 9.188588 CAAATGATGCCATCAGAAACATTATAC 57.811 33.333 13.60 0.00 43.53 1.47
2069 2167 9.134055 TCAAATGATGCCATCAGAAACATTATA 57.866 29.630 13.60 0.00 43.53 0.98
2070 2168 8.014070 TCAAATGATGCCATCAGAAACATTAT 57.986 30.769 13.60 0.00 43.53 1.28
2071 2169 7.407393 TCAAATGATGCCATCAGAAACATTA 57.593 32.000 13.60 0.00 43.53 1.90
2072 2170 6.288941 TCAAATGATGCCATCAGAAACATT 57.711 33.333 13.60 0.00 43.53 2.71
2092 2190 9.481340 GCATAGAACTAGTAACATGATCATCAA 57.519 33.333 4.86 0.00 0.00 2.57
2093 2191 8.864087 AGCATAGAACTAGTAACATGATCATCA 58.136 33.333 4.86 0.00 0.00 3.07
2094 2192 9.703892 AAGCATAGAACTAGTAACATGATCATC 57.296 33.333 4.86 0.00 0.00 2.92
2113 2214 5.368256 AGCAGAAAGAACACAAAGCATAG 57.632 39.130 0.00 0.00 0.00 2.23
2121 2222 4.261994 GGGCAAATTAGCAGAAAGAACACA 60.262 41.667 0.00 0.00 35.83 3.72
2125 2226 3.057596 CGTGGGCAAATTAGCAGAAAGAA 60.058 43.478 0.00 0.00 35.83 2.52
2140 2241 3.626996 CTCTGGCAATCCGTGGGCA 62.627 63.158 0.00 0.00 38.00 5.36
2141 2242 2.825836 CTCTGGCAATCCGTGGGC 60.826 66.667 0.00 0.00 34.14 5.36
2153 2256 0.987294 TCCTCCTCTTTTGCCTCTGG 59.013 55.000 0.00 0.00 0.00 3.86
2156 2259 1.474143 CCGATCCTCCTCTTTTGCCTC 60.474 57.143 0.00 0.00 0.00 4.70
2158 2261 1.098129 GCCGATCCTCCTCTTTTGCC 61.098 60.000 0.00 0.00 0.00 4.52
2168 2271 1.672881 CATTGTTTCCTGCCGATCCTC 59.327 52.381 0.00 0.00 0.00 3.71
2175 2278 5.652452 ACTAAGTTATCCATTGTTTCCTGCC 59.348 40.000 0.00 0.00 0.00 4.85
2190 2293 9.765795 GCAACAGGATAGTCATAACTAAGTTAT 57.234 33.333 0.00 0.00 41.25 1.89
2192 2295 7.766278 CAGCAACAGGATAGTCATAACTAAGTT 59.234 37.037 0.00 0.00 41.25 2.66
2193 2296 7.124298 TCAGCAACAGGATAGTCATAACTAAGT 59.876 37.037 0.00 0.00 41.25 2.24
2205 2384 4.885907 ACAATGGAATCAGCAACAGGATAG 59.114 41.667 0.00 0.00 0.00 2.08
2210 2389 4.682860 GTCAAACAATGGAATCAGCAACAG 59.317 41.667 0.00 0.00 0.00 3.16
2221 2400 4.201940 GCATGATCATCGTCAAACAATGGA 60.202 41.667 4.86 0.00 0.00 3.41
2227 2406 2.353889 AGCAGCATGATCATCGTCAAAC 59.646 45.455 4.86 0.00 39.69 2.93
2229 2408 2.320745 AGCAGCATGATCATCGTCAA 57.679 45.000 4.86 0.00 39.69 3.18
2251 2435 4.141711 TGCACAAAGAACAAGAGGTAGACT 60.142 41.667 0.00 0.00 0.00 3.24
2256 2440 3.004752 ACTGCACAAAGAACAAGAGGT 57.995 42.857 0.00 0.00 0.00 3.85
2260 2444 3.781079 TCCAACTGCACAAAGAACAAG 57.219 42.857 0.00 0.00 0.00 3.16
2261 2445 4.734398 AATCCAACTGCACAAAGAACAA 57.266 36.364 0.00 0.00 0.00 2.83
2262 2446 4.431809 CAAATCCAACTGCACAAAGAACA 58.568 39.130 0.00 0.00 0.00 3.18
2287 2471 8.999895 TGCCTAGGGTTAAATTAGACTAGAAAT 58.000 33.333 11.72 0.00 31.86 2.17
2289 2473 7.622479 ACTGCCTAGGGTTAAATTAGACTAGAA 59.378 37.037 11.72 0.00 31.86 2.10
2290 2474 7.069578 CACTGCCTAGGGTTAAATTAGACTAGA 59.930 40.741 11.72 0.00 31.86 2.43
2307 2520 4.688021 GTCTCTTTATGGACACTGCCTAG 58.312 47.826 0.00 0.00 33.19 3.02
2310 2523 2.271800 CGTCTCTTTATGGACACTGCC 58.728 52.381 0.00 0.00 33.19 4.85
2312 2525 3.254060 CACCGTCTCTTTATGGACACTG 58.746 50.000 0.00 0.00 33.19 3.66
2330 2543 5.049405 CCTTGTCACTGTTTTGATAGACACC 60.049 44.000 0.00 0.00 35.92 4.16
2347 3105 5.132502 ACAGAACATCAAATGTCCTTGTCA 58.867 37.500 0.00 0.00 44.07 3.58
2348 3106 5.695851 ACAGAACATCAAATGTCCTTGTC 57.304 39.130 0.00 0.00 44.07 3.18
2349 3107 6.469782 AAACAGAACATCAAATGTCCTTGT 57.530 33.333 0.00 0.00 44.07 3.16
2350 3108 7.592533 CAGTAAACAGAACATCAAATGTCCTTG 59.407 37.037 0.00 0.00 44.07 3.61
2351 3109 7.502226 TCAGTAAACAGAACATCAAATGTCCTT 59.498 33.333 0.00 0.00 44.07 3.36
2352 3110 6.998074 TCAGTAAACAGAACATCAAATGTCCT 59.002 34.615 0.00 0.00 44.07 3.85
2353 3111 7.202016 TCAGTAAACAGAACATCAAATGTCC 57.798 36.000 0.00 0.00 44.07 4.02
2356 3114 9.681692 TTCAATCAGTAAACAGAACATCAAATG 57.318 29.630 0.00 0.00 0.00 2.32
2357 3115 9.903682 CTTCAATCAGTAAACAGAACATCAAAT 57.096 29.630 0.00 0.00 0.00 2.32
2358 3116 8.902806 ACTTCAATCAGTAAACAGAACATCAAA 58.097 29.630 0.00 0.00 0.00 2.69
2364 3143 7.355778 CCTGAACTTCAATCAGTAAACAGAAC 58.644 38.462 0.00 0.00 42.19 3.01
2397 3176 5.588648 GCATAATGGCACCAGTAAGTTAGAA 59.411 40.000 0.36 0.00 30.22 2.10
2410 3193 1.217001 TCATCGTCGCATAATGGCAC 58.783 50.000 0.00 0.00 0.00 5.01
2434 3217 6.039382 CAGGGGAGGCATAAAAATAGTGTAAC 59.961 42.308 0.00 0.00 0.00 2.50
2435 3218 6.126409 CAGGGGAGGCATAAAAATAGTGTAA 58.874 40.000 0.00 0.00 0.00 2.41
2436 3219 5.690865 CAGGGGAGGCATAAAAATAGTGTA 58.309 41.667 0.00 0.00 0.00 2.90
2437 3220 4.536765 CAGGGGAGGCATAAAAATAGTGT 58.463 43.478 0.00 0.00 0.00 3.55
2438 3221 3.319122 GCAGGGGAGGCATAAAAATAGTG 59.681 47.826 0.00 0.00 0.00 2.74
2439 3222 3.566351 GCAGGGGAGGCATAAAAATAGT 58.434 45.455 0.00 0.00 0.00 2.12
2440 3223 2.554032 CGCAGGGGAGGCATAAAAATAG 59.446 50.000 0.00 0.00 0.00 1.73
2441 3224 2.092103 ACGCAGGGGAGGCATAAAAATA 60.092 45.455 0.00 0.00 0.00 1.40
2442 3225 1.341976 ACGCAGGGGAGGCATAAAAAT 60.342 47.619 0.00 0.00 0.00 1.82
2443 3226 0.039035 ACGCAGGGGAGGCATAAAAA 59.961 50.000 0.00 0.00 0.00 1.94
2444 3227 0.039035 AACGCAGGGGAGGCATAAAA 59.961 50.000 0.00 0.00 0.00 1.52
2445 3228 0.393808 GAACGCAGGGGAGGCATAAA 60.394 55.000 0.00 0.00 0.00 1.40
2446 3229 1.223487 GAACGCAGGGGAGGCATAA 59.777 57.895 0.00 0.00 0.00 1.90
2447 3230 1.271840 AAGAACGCAGGGGAGGCATA 61.272 55.000 0.00 0.00 0.00 3.14
2448 3231 2.142292 AAAGAACGCAGGGGAGGCAT 62.142 55.000 0.00 0.00 0.00 4.40
2449 3232 2.748058 GAAAGAACGCAGGGGAGGCA 62.748 60.000 0.00 0.00 0.00 4.75
2450 3233 2.034221 AAAGAACGCAGGGGAGGC 59.966 61.111 0.00 0.00 0.00 4.70
2451 3234 0.674895 CAGAAAGAACGCAGGGGAGG 60.675 60.000 0.00 0.00 0.00 4.30
2452 3235 1.301677 GCAGAAAGAACGCAGGGGAG 61.302 60.000 0.00 0.00 0.00 4.30
2453 3236 1.302511 GCAGAAAGAACGCAGGGGA 60.303 57.895 0.00 0.00 0.00 4.81
2454 3237 2.335712 GGCAGAAAGAACGCAGGGG 61.336 63.158 0.00 0.00 0.00 4.79
2455 3238 1.580845 CTGGCAGAAAGAACGCAGGG 61.581 60.000 9.42 0.00 0.00 4.45
2456 3239 0.886490 ACTGGCAGAAAGAACGCAGG 60.886 55.000 23.66 0.00 0.00 4.85
2457 3240 0.947244 AACTGGCAGAAAGAACGCAG 59.053 50.000 23.66 0.00 0.00 5.18
2458 3241 0.662619 CAACTGGCAGAAAGAACGCA 59.337 50.000 23.66 0.00 0.00 5.24
2459 3242 0.663153 ACAACTGGCAGAAAGAACGC 59.337 50.000 23.66 0.00 0.00 4.84
2460 3243 1.597937 GCACAACTGGCAGAAAGAACG 60.598 52.381 23.66 3.71 0.00 3.95
2461 3244 1.597937 CGCACAACTGGCAGAAAGAAC 60.598 52.381 23.66 4.87 0.00 3.01
2462 3245 0.662619 CGCACAACTGGCAGAAAGAA 59.337 50.000 23.66 0.00 0.00 2.52
2463 3246 1.165907 CCGCACAACTGGCAGAAAGA 61.166 55.000 23.66 0.00 0.00 2.52
2464 3247 1.283793 CCGCACAACTGGCAGAAAG 59.716 57.895 23.66 12.43 0.00 2.62
2465 3248 1.034838 AACCGCACAACTGGCAGAAA 61.035 50.000 23.66 0.00 0.00 2.52
2466 3249 1.453015 AACCGCACAACTGGCAGAA 60.453 52.632 23.66 0.00 0.00 3.02
2467 3250 2.186160 CAACCGCACAACTGGCAGA 61.186 57.895 23.66 0.00 0.00 4.26
2468 3251 2.332514 CAACCGCACAACTGGCAG 59.667 61.111 14.16 14.16 0.00 4.85
2469 3252 2.974692 ATCCAACCGCACAACTGGCA 62.975 55.000 0.00 0.00 0.00 4.92
2470 3253 1.805428 AATCCAACCGCACAACTGGC 61.805 55.000 0.00 0.00 0.00 4.85
2471 3254 0.039256 CAATCCAACCGCACAACTGG 60.039 55.000 0.00 0.00 0.00 4.00
2472 3255 0.039256 CCAATCCAACCGCACAACTG 60.039 55.000 0.00 0.00 0.00 3.16
2473 3256 1.805428 GCCAATCCAACCGCACAACT 61.805 55.000 0.00 0.00 0.00 3.16
2474 3257 1.372872 GCCAATCCAACCGCACAAC 60.373 57.895 0.00 0.00 0.00 3.32
2475 3258 1.530419 AGCCAATCCAACCGCACAA 60.530 52.632 0.00 0.00 0.00 3.33
2476 3259 2.115052 AGCCAATCCAACCGCACA 59.885 55.556 0.00 0.00 0.00 4.57
2477 3260 1.805428 AACAGCCAATCCAACCGCAC 61.805 55.000 0.00 0.00 0.00 5.34
2478 3261 1.112315 AAACAGCCAATCCAACCGCA 61.112 50.000 0.00 0.00 0.00 5.69
2479 3262 0.388520 GAAACAGCCAATCCAACCGC 60.389 55.000 0.00 0.00 0.00 5.68
2480 3263 0.958091 TGAAACAGCCAATCCAACCG 59.042 50.000 0.00 0.00 0.00 4.44
2481 3264 1.963515 AGTGAAACAGCCAATCCAACC 59.036 47.619 0.00 0.00 41.43 3.77
2482 3265 2.622942 TGAGTGAAACAGCCAATCCAAC 59.377 45.455 0.00 0.00 41.43 3.77
2483 3266 2.942804 TGAGTGAAACAGCCAATCCAA 58.057 42.857 0.00 0.00 41.43 3.53
2484 3267 2.655090 TGAGTGAAACAGCCAATCCA 57.345 45.000 0.00 0.00 41.43 3.41
2485 3268 4.202151 ACTTTTGAGTGAAACAGCCAATCC 60.202 41.667 0.00 0.00 41.43 3.01
2486 3269 4.936891 ACTTTTGAGTGAAACAGCCAATC 58.063 39.130 0.00 0.00 41.43 2.67
2487 3270 5.507985 GCTACTTTTGAGTGAAACAGCCAAT 60.508 40.000 0.00 0.00 41.43 3.16
2488 3271 4.202010 GCTACTTTTGAGTGAAACAGCCAA 60.202 41.667 0.00 0.00 41.43 4.52
2489 3272 3.315191 GCTACTTTTGAGTGAAACAGCCA 59.685 43.478 0.00 0.00 41.43 4.75
2490 3273 3.315191 TGCTACTTTTGAGTGAAACAGCC 59.685 43.478 0.00 0.00 41.43 4.85
2491 3274 4.552166 TGCTACTTTTGAGTGAAACAGC 57.448 40.909 0.00 0.00 41.43 4.40
2492 3275 5.471456 AGGATGCTACTTTTGAGTGAAACAG 59.529 40.000 0.00 0.00 41.43 3.16
2493 3276 5.376625 AGGATGCTACTTTTGAGTGAAACA 58.623 37.500 0.00 0.00 41.43 2.83
2494 3277 5.106515 GGAGGATGCTACTTTTGAGTGAAAC 60.107 44.000 0.00 0.00 0.00 2.78
2495 3278 5.003804 GGAGGATGCTACTTTTGAGTGAAA 58.996 41.667 0.00 0.00 0.00 2.69
2496 3279 4.579869 GGAGGATGCTACTTTTGAGTGAA 58.420 43.478 0.00 0.00 0.00 3.18
2497 3280 3.368427 CGGAGGATGCTACTTTTGAGTGA 60.368 47.826 0.00 0.00 0.00 3.41
2498 3281 2.932614 CGGAGGATGCTACTTTTGAGTG 59.067 50.000 0.00 0.00 0.00 3.51
2499 3282 2.567615 ACGGAGGATGCTACTTTTGAGT 59.432 45.455 0.00 0.00 0.00 3.41
2500 3283 3.190874 GACGGAGGATGCTACTTTTGAG 58.809 50.000 0.00 0.00 0.00 3.02
2501 3284 2.093658 GGACGGAGGATGCTACTTTTGA 60.094 50.000 0.00 0.00 0.00 2.69
2502 3285 2.280628 GGACGGAGGATGCTACTTTTG 58.719 52.381 0.00 0.00 0.00 2.44
2503 3286 1.906574 TGGACGGAGGATGCTACTTTT 59.093 47.619 0.00 0.00 0.00 2.27
2504 3287 1.482593 CTGGACGGAGGATGCTACTTT 59.517 52.381 0.00 0.00 0.00 2.66
2505 3288 1.115467 CTGGACGGAGGATGCTACTT 58.885 55.000 0.00 0.00 0.00 2.24
2506 3289 0.757188 CCTGGACGGAGGATGCTACT 60.757 60.000 0.00 0.00 34.69 2.57
2507 3290 1.742768 CCTGGACGGAGGATGCTAC 59.257 63.158 0.00 0.00 34.69 3.58
2508 3291 2.134287 GCCTGGACGGAGGATGCTA 61.134 63.158 0.00 0.00 34.69 3.49
2509 3292 3.474570 GCCTGGACGGAGGATGCT 61.475 66.667 0.00 0.00 34.69 3.79
2510 3293 1.686325 TAAGCCTGGACGGAGGATGC 61.686 60.000 0.00 0.00 34.69 3.91
2511 3294 0.830648 TTAAGCCTGGACGGAGGATG 59.169 55.000 0.00 0.00 34.69 3.51
2512 3295 1.417890 CATTAAGCCTGGACGGAGGAT 59.582 52.381 0.00 0.00 34.69 3.24
2513 3296 0.830648 CATTAAGCCTGGACGGAGGA 59.169 55.000 0.00 0.00 34.69 3.71
2514 3297 0.541863 ACATTAAGCCTGGACGGAGG 59.458 55.000 0.00 0.00 36.03 4.30
2515 3298 2.403252 AACATTAAGCCTGGACGGAG 57.597 50.000 0.00 0.00 33.16 4.63
2516 3299 4.497291 AATAACATTAAGCCTGGACGGA 57.503 40.909 0.00 0.00 33.16 4.69
2517 3300 5.008316 GGTTAATAACATTAAGCCTGGACGG 59.992 44.000 5.45 0.00 0.00 4.79
2518 3301 5.820947 AGGTTAATAACATTAAGCCTGGACG 59.179 40.000 14.14 0.00 34.06 4.79
2519 3302 7.027778 CAGGTTAATAACATTAAGCCTGGAC 57.972 40.000 19.51 0.00 38.73 4.02
2522 3305 8.514330 TTACCAGGTTAATAACATTAAGCCTG 57.486 34.615 19.89 19.89 41.19 4.85
2523 3306 9.709387 ATTTACCAGGTTAATAACATTAAGCCT 57.291 29.630 14.14 10.20 34.06 4.58
2537 3320 8.862085 CCCTTTTAACTTCAATTTACCAGGTTA 58.138 33.333 0.00 0.00 0.00 2.85
2538 3321 7.202056 CCCCTTTTAACTTCAATTTACCAGGTT 60.202 37.037 0.00 0.00 0.00 3.50
2539 3322 6.269077 CCCCTTTTAACTTCAATTTACCAGGT 59.731 38.462 0.00 0.00 0.00 4.00
2540 3323 6.495526 TCCCCTTTTAACTTCAATTTACCAGG 59.504 38.462 0.00 0.00 0.00 4.45
2541 3324 7.533289 TCCCCTTTTAACTTCAATTTACCAG 57.467 36.000 0.00 0.00 0.00 4.00
2542 3325 8.499288 AATCCCCTTTTAACTTCAATTTACCA 57.501 30.769 0.00 0.00 0.00 3.25
2543 3326 9.787435 AAAATCCCCTTTTAACTTCAATTTACC 57.213 29.630 0.00 0.00 35.27 2.85
2546 3329 9.693739 ACAAAAATCCCCTTTTAACTTCAATTT 57.306 25.926 0.00 0.00 36.01 1.82
2547 3330 9.119418 CACAAAAATCCCCTTTTAACTTCAATT 57.881 29.630 0.00 0.00 36.01 2.32
2548 3331 7.228507 GCACAAAAATCCCCTTTTAACTTCAAT 59.771 33.333 0.00 0.00 36.01 2.57
2549 3332 6.540551 GCACAAAAATCCCCTTTTAACTTCAA 59.459 34.615 0.00 0.00 36.01 2.69
2550 3333 6.052360 GCACAAAAATCCCCTTTTAACTTCA 58.948 36.000 0.00 0.00 36.01 3.02
2551 3334 6.052360 TGCACAAAAATCCCCTTTTAACTTC 58.948 36.000 0.00 0.00 36.01 3.01
2552 3335 5.995446 TGCACAAAAATCCCCTTTTAACTT 58.005 33.333 0.00 0.00 36.01 2.66
2553 3336 5.622346 TGCACAAAAATCCCCTTTTAACT 57.378 34.783 0.00 0.00 36.01 2.24
2554 3337 7.010091 CGATATGCACAAAAATCCCCTTTTAAC 59.990 37.037 0.00 0.00 36.01 2.01
2555 3338 7.038659 CGATATGCACAAAAATCCCCTTTTAA 58.961 34.615 0.00 0.00 36.01 1.52
2556 3339 6.378564 TCGATATGCACAAAAATCCCCTTTTA 59.621 34.615 0.00 0.00 36.01 1.52
2557 3340 5.186797 TCGATATGCACAAAAATCCCCTTTT 59.813 36.000 0.00 0.00 38.73 2.27
2558 3341 4.709397 TCGATATGCACAAAAATCCCCTTT 59.291 37.500 0.00 0.00 0.00 3.11
2559 3342 4.277476 TCGATATGCACAAAAATCCCCTT 58.723 39.130 0.00 0.00 0.00 3.95
2560 3343 3.897239 TCGATATGCACAAAAATCCCCT 58.103 40.909 0.00 0.00 0.00 4.79
2561 3344 4.647424 TTCGATATGCACAAAAATCCCC 57.353 40.909 0.00 0.00 0.00 4.81
2562 3345 5.890334 TCTTTCGATATGCACAAAAATCCC 58.110 37.500 0.00 0.00 0.00 3.85
2563 3346 6.806249 TGTTCTTTCGATATGCACAAAAATCC 59.194 34.615 0.00 0.00 0.00 3.01
2564 3347 7.795431 TGTTCTTTCGATATGCACAAAAATC 57.205 32.000 0.00 0.00 0.00 2.17
2565 3348 8.761575 ATTGTTCTTTCGATATGCACAAAAAT 57.238 26.923 0.00 0.00 0.00 1.82
2566 3349 7.328249 GGATTGTTCTTTCGATATGCACAAAAA 59.672 33.333 0.00 0.00 0.00 1.94
2567 3350 6.806249 GGATTGTTCTTTCGATATGCACAAAA 59.194 34.615 0.00 0.00 0.00 2.44
2568 3351 6.072230 TGGATTGTTCTTTCGATATGCACAAA 60.072 34.615 0.00 0.00 0.00 2.83
2569 3352 5.414144 TGGATTGTTCTTTCGATATGCACAA 59.586 36.000 0.00 0.00 0.00 3.33
2570 3353 4.940654 TGGATTGTTCTTTCGATATGCACA 59.059 37.500 0.00 0.00 0.00 4.57
2571 3354 5.484173 TGGATTGTTCTTTCGATATGCAC 57.516 39.130 0.00 0.00 0.00 4.57
2572 3355 6.698008 AATGGATTGTTCTTTCGATATGCA 57.302 33.333 0.00 0.00 0.00 3.96
2573 3356 7.865707 AGTAATGGATTGTTCTTTCGATATGC 58.134 34.615 0.00 0.00 0.00 3.14
2577 3360 8.883731 CAAGTAGTAATGGATTGTTCTTTCGAT 58.116 33.333 0.00 0.00 0.00 3.59
2578 3361 7.333423 CCAAGTAGTAATGGATTGTTCTTTCGA 59.667 37.037 0.00 0.00 39.12 3.71
2579 3362 7.119262 ACCAAGTAGTAATGGATTGTTCTTTCG 59.881 37.037 9.64 0.00 39.12 3.46
2580 3363 8.336801 ACCAAGTAGTAATGGATTGTTCTTTC 57.663 34.615 9.64 0.00 39.12 2.62
2581 3364 8.706322 AACCAAGTAGTAATGGATTGTTCTTT 57.294 30.769 9.64 0.00 39.12 2.52
2582 3365 7.942341 TGAACCAAGTAGTAATGGATTGTTCTT 59.058 33.333 9.64 0.00 39.12 2.52
2583 3366 7.458397 TGAACCAAGTAGTAATGGATTGTTCT 58.542 34.615 9.64 0.00 39.12 3.01
2584 3367 7.148239 CCTGAACCAAGTAGTAATGGATTGTTC 60.148 40.741 9.64 0.00 39.12 3.18
2585 3368 6.659242 CCTGAACCAAGTAGTAATGGATTGTT 59.341 38.462 9.64 0.00 39.12 2.83
2586 3369 6.180472 CCTGAACCAAGTAGTAATGGATTGT 58.820 40.000 9.64 0.00 39.12 2.71
2587 3370 5.590259 CCCTGAACCAAGTAGTAATGGATTG 59.410 44.000 9.64 0.00 39.12 2.67
2588 3371 5.491078 TCCCTGAACCAAGTAGTAATGGATT 59.509 40.000 9.64 2.05 39.12 3.01
2589 3372 5.036916 TCCCTGAACCAAGTAGTAATGGAT 58.963 41.667 9.64 0.00 39.12 3.41
2590 3373 4.431378 TCCCTGAACCAAGTAGTAATGGA 58.569 43.478 9.64 0.00 39.12 3.41
2591 3374 4.770795 CTCCCTGAACCAAGTAGTAATGG 58.229 47.826 2.40 2.40 42.60 3.16
2592 3375 4.192317 GCTCCCTGAACCAAGTAGTAATG 58.808 47.826 0.00 0.00 0.00 1.90
2593 3376 3.844211 TGCTCCCTGAACCAAGTAGTAAT 59.156 43.478 0.00 0.00 0.00 1.89
2594 3377 3.007614 GTGCTCCCTGAACCAAGTAGTAA 59.992 47.826 0.00 0.00 0.00 2.24
2595 3378 2.565834 GTGCTCCCTGAACCAAGTAGTA 59.434 50.000 0.00 0.00 0.00 1.82
2596 3379 1.348036 GTGCTCCCTGAACCAAGTAGT 59.652 52.381 0.00 0.00 0.00 2.73
2597 3380 1.347707 TGTGCTCCCTGAACCAAGTAG 59.652 52.381 0.00 0.00 0.00 2.57
2598 3381 1.429930 TGTGCTCCCTGAACCAAGTA 58.570 50.000 0.00 0.00 0.00 2.24
2599 3382 0.550914 TTGTGCTCCCTGAACCAAGT 59.449 50.000 0.00 0.00 0.00 3.16
2600 3383 1.202806 TCTTGTGCTCCCTGAACCAAG 60.203 52.381 0.00 0.00 0.00 3.61
2601 3384 0.843309 TCTTGTGCTCCCTGAACCAA 59.157 50.000 0.00 0.00 0.00 3.67
2602 3385 1.067295 ATCTTGTGCTCCCTGAACCA 58.933 50.000 0.00 0.00 0.00 3.67
2603 3386 3.010420 GTTATCTTGTGCTCCCTGAACC 58.990 50.000 0.00 0.00 0.00 3.62
2604 3387 3.944087 AGTTATCTTGTGCTCCCTGAAC 58.056 45.455 0.00 0.00 0.00 3.18
2605 3388 4.530553 TGTAGTTATCTTGTGCTCCCTGAA 59.469 41.667 0.00 0.00 0.00 3.02
2606 3389 4.093743 TGTAGTTATCTTGTGCTCCCTGA 58.906 43.478 0.00 0.00 0.00 3.86
2607 3390 4.471904 TGTAGTTATCTTGTGCTCCCTG 57.528 45.455 0.00 0.00 0.00 4.45
2608 3391 7.380423 AATATGTAGTTATCTTGTGCTCCCT 57.620 36.000 0.00 0.00 0.00 4.20
2609 3392 8.368668 AGTAATATGTAGTTATCTTGTGCTCCC 58.631 37.037 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.