Multiple sequence alignment - TraesCS7A01G269700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G269700 chr7A 100.000 2415 0 0 1 2415 275915291 275917705 0.000000e+00 4460.0
1 TraesCS7A01G269700 chr7A 89.024 82 9 0 124 205 116983105 116983186 4.250000e-18 102.0
2 TraesCS7A01G269700 chr7A 87.209 86 8 3 208 292 91724247 91724164 7.110000e-16 95.3
3 TraesCS7A01G269700 chr7A 88.608 79 7 2 206 283 126187210 126187133 7.110000e-16 95.3
4 TraesCS7A01G269700 chr7D 94.190 1136 50 10 469 1595 255968608 255969736 0.000000e+00 1718.0
5 TraesCS7A01G269700 chr7D 88.841 690 47 10 1756 2415 255969983 255970672 0.000000e+00 821.0
6 TraesCS7A01G269700 chr7D 89.873 79 6 2 206 283 572547627 572547704 1.530000e-17 100.0
7 TraesCS7A01G269700 chr7B 92.226 1042 50 15 566 1595 234590026 234591048 0.000000e+00 1447.0
8 TraesCS7A01G269700 chr7B 88.362 696 45 12 1756 2415 234591292 234591987 0.000000e+00 804.0
9 TraesCS7A01G269700 chr7B 91.026 78 7 0 206 283 191891986 191891909 3.280000e-19 106.0
10 TraesCS7A01G269700 chr6B 87.705 122 10 1 1 122 298728954 298729070 1.160000e-28 137.0
11 TraesCS7A01G269700 chr6B 86.066 122 12 1 2 123 329078390 329078274 2.520000e-25 126.0
12 TraesCS7A01G269700 chr6B 91.026 78 7 0 206 283 554659442 554659365 3.280000e-19 106.0
13 TraesCS7A01G269700 chr6A 85.271 129 13 2 2 130 297951477 297951355 7.010000e-26 128.0
14 TraesCS7A01G269700 chr6A 85.484 124 13 1 2 125 292454054 292454172 9.070000e-25 124.0
15 TraesCS7A01G269700 chr3B 86.066 122 12 1 2 123 446652627 446652511 2.520000e-25 126.0
16 TraesCS7A01G269700 chr3B 88.462 78 9 0 206 283 807529236 807529313 7.110000e-16 95.3
17 TraesCS7A01G269700 chr2A 86.066 122 12 1 2 123 281651930 281651814 2.520000e-25 126.0
18 TraesCS7A01G269700 chr2A 85.039 127 13 4 1 126 257184881 257184760 9.070000e-25 124.0
19 TraesCS7A01G269700 chr4A 84.677 124 14 1 2 125 312971513 312971631 4.220000e-23 119.0
20 TraesCS7A01G269700 chr4A 89.024 82 9 0 124 205 629493557 629493476 4.250000e-18 102.0
21 TraesCS7A01G269700 chr4A 87.805 82 10 0 124 205 547034687 547034768 1.980000e-16 97.1
22 TraesCS7A01G269700 chrUn 82.270 141 19 2 2 141 120576693 120576828 1.520000e-22 117.0
23 TraesCS7A01G269700 chr1B 93.421 76 5 0 206 281 390268685 390268760 1.960000e-21 113.0
24 TraesCS7A01G269700 chr1B 87.805 82 10 0 124 205 430028536 430028617 1.980000e-16 97.1
25 TraesCS7A01G269700 chr1B 87.805 82 10 0 124 205 635545239 635545158 1.980000e-16 97.1
26 TraesCS7A01G269700 chr5B 90.244 82 8 0 124 205 153888726 153888807 9.130000e-20 108.0
27 TraesCS7A01G269700 chr5B 89.873 79 6 2 206 283 340573657 340573734 1.530000e-17 100.0
28 TraesCS7A01G269700 chr5B 87.805 82 10 0 124 205 43067641 43067560 1.980000e-16 97.1
29 TraesCS7A01G269700 chr1A 88.095 84 10 0 122 205 49354583 49354500 1.530000e-17 100.0
30 TraesCS7A01G269700 chr5A 87.805 82 10 0 124 205 636410665 636410584 1.980000e-16 97.1
31 TraesCS7A01G269700 chr4D 87.179 78 10 0 206 283 285748706 285748629 3.310000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G269700 chr7A 275915291 275917705 2414 False 4460.0 4460 100.0000 1 2415 1 chr7A.!!$F2 2414
1 TraesCS7A01G269700 chr7D 255968608 255970672 2064 False 1269.5 1718 91.5155 469 2415 2 chr7D.!!$F2 1946
2 TraesCS7A01G269700 chr7B 234590026 234591987 1961 False 1125.5 1447 90.2940 566 2415 2 chr7B.!!$F1 1849

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
210 211 0.027194 CGGCATGTCATCTTTGCGAG 59.973 55.0 0.0 0.0 37.25 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1693 1758 0.037697 TCTACGCGGCATTGAGTGTT 60.038 50.0 12.47 0.0 32.87 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.739498 GTTACCAAGAAATGAAAGTACCTGA 57.261 36.000 0.00 0.00 0.00 3.86
25 26 8.336801 GTTACCAAGAAATGAAAGTACCTGAT 57.663 34.615 0.00 0.00 0.00 2.90
26 27 9.444600 GTTACCAAGAAATGAAAGTACCTGATA 57.555 33.333 0.00 0.00 0.00 2.15
45 46 8.999431 ACCTGATAATATAATTTAGTTGGCGTG 58.001 33.333 0.00 0.00 0.00 5.34
46 47 7.962918 CCTGATAATATAATTTAGTTGGCGTGC 59.037 37.037 0.00 0.00 0.00 5.34
47 48 7.514805 TGATAATATAATTTAGTTGGCGTGCG 58.485 34.615 0.00 0.00 0.00 5.34
48 49 2.468532 ATAATTTAGTTGGCGTGCGC 57.531 45.000 8.17 8.17 41.06 6.09
49 50 0.095589 TAATTTAGTTGGCGTGCGCG 59.904 50.000 16.86 16.86 43.06 6.86
50 51 1.570347 AATTTAGTTGGCGTGCGCGA 61.570 50.000 26.19 0.00 43.06 5.87
51 52 1.966493 ATTTAGTTGGCGTGCGCGAG 61.966 55.000 26.19 0.19 43.06 5.03
67 68 3.873529 CGCGAGCTTTAATAATTGGTCC 58.126 45.455 0.00 0.00 0.00 4.46
68 69 3.311322 CGCGAGCTTTAATAATTGGTCCA 59.689 43.478 0.00 0.00 0.00 4.02
69 70 4.201871 CGCGAGCTTTAATAATTGGTCCAA 60.202 41.667 6.80 6.80 0.00 3.53
70 71 5.505654 CGCGAGCTTTAATAATTGGTCCAAT 60.506 40.000 11.59 11.59 35.39 3.16
71 72 6.293190 CGCGAGCTTTAATAATTGGTCCAATA 60.293 38.462 17.63 6.84 32.43 1.90
72 73 7.573096 CGCGAGCTTTAATAATTGGTCCAATAT 60.573 37.037 17.63 9.61 32.43 1.28
73 74 8.726988 GCGAGCTTTAATAATTGGTCCAATATA 58.273 33.333 17.63 11.96 32.43 0.86
84 85 8.571461 AATTGGTCCAATATATGTATCAGCAG 57.429 34.615 17.63 0.00 32.43 4.24
85 86 6.053632 TGGTCCAATATATGTATCAGCAGG 57.946 41.667 0.00 0.00 0.00 4.85
86 87 5.045651 TGGTCCAATATATGTATCAGCAGGG 60.046 44.000 0.00 0.00 0.00 4.45
87 88 5.189736 GGTCCAATATATGTATCAGCAGGGA 59.810 44.000 0.00 0.00 0.00 4.20
88 89 6.126652 GGTCCAATATATGTATCAGCAGGGAT 60.127 42.308 0.00 0.00 0.00 3.85
89 90 7.341805 GTCCAATATATGTATCAGCAGGGATT 58.658 38.462 0.00 0.00 0.00 3.01
90 91 7.281774 GTCCAATATATGTATCAGCAGGGATTG 59.718 40.741 0.00 0.00 0.00 2.67
91 92 7.037370 TCCAATATATGTATCAGCAGGGATTGT 60.037 37.037 0.00 0.00 0.00 2.71
92 93 7.066645 CCAATATATGTATCAGCAGGGATTGTG 59.933 40.741 0.00 0.00 0.00 3.33
93 94 2.715749 TGTATCAGCAGGGATTGTGG 57.284 50.000 0.00 0.00 0.00 4.17
94 95 1.212688 TGTATCAGCAGGGATTGTGGG 59.787 52.381 0.00 0.00 0.00 4.61
95 96 1.212935 GTATCAGCAGGGATTGTGGGT 59.787 52.381 0.00 0.00 0.00 4.51
96 97 0.033796 ATCAGCAGGGATTGTGGGTG 60.034 55.000 0.00 0.00 0.00 4.61
97 98 1.075482 CAGCAGGGATTGTGGGTGT 59.925 57.895 0.00 0.00 0.00 4.16
98 99 0.327924 CAGCAGGGATTGTGGGTGTA 59.672 55.000 0.00 0.00 0.00 2.90
99 100 1.072266 AGCAGGGATTGTGGGTGTAA 58.928 50.000 0.00 0.00 0.00 2.41
100 101 1.640670 AGCAGGGATTGTGGGTGTAAT 59.359 47.619 0.00 0.00 0.00 1.89
101 102 2.042979 AGCAGGGATTGTGGGTGTAATT 59.957 45.455 0.00 0.00 0.00 1.40
102 103 2.166254 GCAGGGATTGTGGGTGTAATTG 59.834 50.000 0.00 0.00 0.00 2.32
103 104 3.430453 CAGGGATTGTGGGTGTAATTGT 58.570 45.455 0.00 0.00 0.00 2.71
104 105 4.594970 CAGGGATTGTGGGTGTAATTGTA 58.405 43.478 0.00 0.00 0.00 2.41
105 106 4.640201 CAGGGATTGTGGGTGTAATTGTAG 59.360 45.833 0.00 0.00 0.00 2.74
106 107 4.291249 AGGGATTGTGGGTGTAATTGTAGT 59.709 41.667 0.00 0.00 0.00 2.73
107 108 5.489637 AGGGATTGTGGGTGTAATTGTAGTA 59.510 40.000 0.00 0.00 0.00 1.82
108 109 5.820947 GGGATTGTGGGTGTAATTGTAGTAG 59.179 44.000 0.00 0.00 0.00 2.57
109 110 6.412214 GGATTGTGGGTGTAATTGTAGTAGT 58.588 40.000 0.00 0.00 0.00 2.73
110 111 6.315393 GGATTGTGGGTGTAATTGTAGTAGTG 59.685 42.308 0.00 0.00 0.00 2.74
111 112 6.422344 TTGTGGGTGTAATTGTAGTAGTGA 57.578 37.500 0.00 0.00 0.00 3.41
112 113 6.614694 TGTGGGTGTAATTGTAGTAGTGAT 57.385 37.500 0.00 0.00 0.00 3.06
113 114 6.403049 TGTGGGTGTAATTGTAGTAGTGATG 58.597 40.000 0.00 0.00 0.00 3.07
114 115 6.014070 TGTGGGTGTAATTGTAGTAGTGATGT 60.014 38.462 0.00 0.00 0.00 3.06
115 116 6.534079 GTGGGTGTAATTGTAGTAGTGATGTC 59.466 42.308 0.00 0.00 0.00 3.06
116 117 6.047231 GGGTGTAATTGTAGTAGTGATGTCC 58.953 44.000 0.00 0.00 0.00 4.02
117 118 6.047231 GGTGTAATTGTAGTAGTGATGTCCC 58.953 44.000 0.00 0.00 0.00 4.46
118 119 6.047231 GTGTAATTGTAGTAGTGATGTCCCC 58.953 44.000 0.00 0.00 0.00 4.81
119 120 5.722441 TGTAATTGTAGTAGTGATGTCCCCA 59.278 40.000 0.00 0.00 0.00 4.96
120 121 5.975988 AATTGTAGTAGTGATGTCCCCAT 57.024 39.130 0.00 0.00 0.00 4.00
121 122 5.552870 ATTGTAGTAGTGATGTCCCCATC 57.447 43.478 0.00 0.00 46.41 3.51
130 131 3.845781 GATGTCCCCATCACATACACT 57.154 47.619 0.00 0.00 45.68 3.55
131 132 3.733337 GATGTCCCCATCACATACACTC 58.267 50.000 0.00 0.00 45.68 3.51
132 133 2.545810 TGTCCCCATCACATACACTCA 58.454 47.619 0.00 0.00 0.00 3.41
133 134 3.114606 TGTCCCCATCACATACACTCAT 58.885 45.455 0.00 0.00 0.00 2.90
134 135 3.134623 TGTCCCCATCACATACACTCATC 59.865 47.826 0.00 0.00 0.00 2.92
135 136 3.389329 GTCCCCATCACATACACTCATCT 59.611 47.826 0.00 0.00 0.00 2.90
136 137 3.643320 TCCCCATCACATACACTCATCTC 59.357 47.826 0.00 0.00 0.00 2.75
137 138 3.645212 CCCCATCACATACACTCATCTCT 59.355 47.826 0.00 0.00 0.00 3.10
138 139 4.835056 CCCCATCACATACACTCATCTCTA 59.165 45.833 0.00 0.00 0.00 2.43
139 140 5.483231 CCCCATCACATACACTCATCTCTAT 59.517 44.000 0.00 0.00 0.00 1.98
140 141 6.396450 CCCATCACATACACTCATCTCTATG 58.604 44.000 0.00 0.00 0.00 2.23
141 142 6.210185 CCCATCACATACACTCATCTCTATGA 59.790 42.308 0.00 0.00 39.87 2.15
142 143 7.256083 CCCATCACATACACTCATCTCTATGAA 60.256 40.741 0.00 0.00 41.57 2.57
143 144 7.598118 CCATCACATACACTCATCTCTATGAAC 59.402 40.741 0.00 0.00 41.57 3.18
144 145 6.729187 TCACATACACTCATCTCTATGAACG 58.271 40.000 0.00 0.00 41.57 3.95
145 146 5.400782 CACATACACTCATCTCTATGAACGC 59.599 44.000 0.00 0.00 41.57 4.84
146 147 5.067805 ACATACACTCATCTCTATGAACGCA 59.932 40.000 0.00 0.00 41.57 5.24
147 148 3.775202 ACACTCATCTCTATGAACGCAC 58.225 45.455 0.00 0.00 41.57 5.34
148 149 3.193479 ACACTCATCTCTATGAACGCACA 59.807 43.478 0.00 0.00 41.57 4.57
149 150 3.549471 CACTCATCTCTATGAACGCACAC 59.451 47.826 0.00 0.00 41.57 3.82
150 151 3.193479 ACTCATCTCTATGAACGCACACA 59.807 43.478 0.00 0.00 41.57 3.72
151 152 3.511699 TCATCTCTATGAACGCACACAC 58.488 45.455 0.00 0.00 39.20 3.82
152 153 3.056891 TCATCTCTATGAACGCACACACA 60.057 43.478 0.00 0.00 39.20 3.72
153 154 2.672714 TCTCTATGAACGCACACACAC 58.327 47.619 0.00 0.00 0.00 3.82
154 155 1.386748 CTCTATGAACGCACACACACG 59.613 52.381 0.00 0.00 0.00 4.49
155 156 0.179250 CTATGAACGCACACACACGC 60.179 55.000 0.00 0.00 0.00 5.34
156 157 0.876342 TATGAACGCACACACACGCA 60.876 50.000 0.00 0.00 0.00 5.24
157 158 1.506309 ATGAACGCACACACACGCAT 61.506 50.000 0.00 0.00 0.00 4.73
158 159 1.438710 GAACGCACACACACGCATC 60.439 57.895 0.00 0.00 0.00 3.91
159 160 2.764251 GAACGCACACACACGCATCC 62.764 60.000 0.00 0.00 0.00 3.51
160 161 3.043713 CGCACACACACGCATCCT 61.044 61.111 0.00 0.00 0.00 3.24
161 162 1.736282 CGCACACACACGCATCCTA 60.736 57.895 0.00 0.00 0.00 2.94
162 163 1.083806 CGCACACACACGCATCCTAT 61.084 55.000 0.00 0.00 0.00 2.57
163 164 0.652592 GCACACACACGCATCCTATC 59.347 55.000 0.00 0.00 0.00 2.08
164 165 1.290203 CACACACACGCATCCTATCC 58.710 55.000 0.00 0.00 0.00 2.59
165 166 0.178068 ACACACACGCATCCTATCCC 59.822 55.000 0.00 0.00 0.00 3.85
166 167 0.465705 CACACACGCATCCTATCCCT 59.534 55.000 0.00 0.00 0.00 4.20
167 168 1.686587 CACACACGCATCCTATCCCTA 59.313 52.381 0.00 0.00 0.00 3.53
168 169 2.300152 CACACACGCATCCTATCCCTAT 59.700 50.000 0.00 0.00 0.00 2.57
169 170 2.300152 ACACACGCATCCTATCCCTATG 59.700 50.000 0.00 0.00 0.00 2.23
170 171 2.562738 CACACGCATCCTATCCCTATGA 59.437 50.000 0.00 0.00 0.00 2.15
171 172 2.828520 ACACGCATCCTATCCCTATGAG 59.171 50.000 0.00 0.00 0.00 2.90
172 173 1.827969 ACGCATCCTATCCCTATGAGC 59.172 52.381 0.00 0.00 0.00 4.26
173 174 1.827344 CGCATCCTATCCCTATGAGCA 59.173 52.381 0.00 0.00 0.00 4.26
174 175 2.417924 CGCATCCTATCCCTATGAGCAC 60.418 54.545 0.00 0.00 0.00 4.40
175 176 2.568956 GCATCCTATCCCTATGAGCACA 59.431 50.000 0.00 0.00 0.00 4.57
176 177 3.199508 GCATCCTATCCCTATGAGCACAT 59.800 47.826 1.31 1.31 40.16 3.21
177 178 4.682859 GCATCCTATCCCTATGAGCACATC 60.683 50.000 0.00 0.00 37.87 3.06
178 179 3.445008 TCCTATCCCTATGAGCACATCC 58.555 50.000 0.00 0.00 37.87 3.51
179 180 2.167281 CCTATCCCTATGAGCACATCCG 59.833 54.545 0.00 0.00 37.87 4.18
180 181 2.015456 ATCCCTATGAGCACATCCGA 57.985 50.000 0.00 0.00 37.87 4.55
181 182 1.332195 TCCCTATGAGCACATCCGAG 58.668 55.000 0.00 0.00 37.87 4.63
182 183 1.133482 TCCCTATGAGCACATCCGAGA 60.133 52.381 0.00 0.00 37.87 4.04
183 184 1.271934 CCCTATGAGCACATCCGAGAG 59.728 57.143 0.00 0.00 37.87 3.20
184 185 1.336702 CCTATGAGCACATCCGAGAGC 60.337 57.143 0.00 0.00 37.87 4.09
185 186 1.612950 CTATGAGCACATCCGAGAGCT 59.387 52.381 0.00 0.00 40.60 4.09
186 187 0.829333 ATGAGCACATCCGAGAGCTT 59.171 50.000 0.00 0.00 37.48 3.74
187 188 0.108472 TGAGCACATCCGAGAGCTTG 60.108 55.000 0.00 0.00 37.48 4.01
188 189 0.174389 GAGCACATCCGAGAGCTTGA 59.826 55.000 0.00 0.00 37.48 3.02
189 190 0.175302 AGCACATCCGAGAGCTTGAG 59.825 55.000 0.00 0.00 32.52 3.02
190 191 0.809241 GCACATCCGAGAGCTTGAGG 60.809 60.000 0.00 0.00 0.00 3.86
191 192 0.809241 CACATCCGAGAGCTTGAGGC 60.809 60.000 0.00 0.00 42.19 4.70
200 201 2.747460 GCTTGAGGCGGCATGTCA 60.747 61.111 13.08 3.04 0.00 3.58
201 202 2.117156 GCTTGAGGCGGCATGTCAT 61.117 57.895 13.08 0.00 0.00 3.06
202 203 2.020131 CTTGAGGCGGCATGTCATC 58.980 57.895 13.08 0.00 0.00 2.92
203 204 0.463295 CTTGAGGCGGCATGTCATCT 60.463 55.000 13.08 0.00 0.00 2.90
204 205 0.035152 TTGAGGCGGCATGTCATCTT 60.035 50.000 13.08 0.00 0.00 2.40
205 206 0.035152 TGAGGCGGCATGTCATCTTT 60.035 50.000 13.08 0.00 0.00 2.52
206 207 0.379669 GAGGCGGCATGTCATCTTTG 59.620 55.000 13.08 0.00 0.00 2.77
207 208 1.226773 GGCGGCATGTCATCTTTGC 60.227 57.895 3.07 0.00 35.64 3.68
208 209 1.584483 GCGGCATGTCATCTTTGCG 60.584 57.895 0.00 0.00 37.25 4.85
209 210 1.980951 GCGGCATGTCATCTTTGCGA 61.981 55.000 0.00 0.00 37.25 5.10
210 211 0.027194 CGGCATGTCATCTTTGCGAG 59.973 55.000 0.00 0.00 37.25 5.03
211 212 0.248377 GGCATGTCATCTTTGCGAGC 60.248 55.000 0.00 0.00 37.25 5.03
212 213 0.448990 GCATGTCATCTTTGCGAGCA 59.551 50.000 0.00 0.00 0.00 4.26
213 214 1.792993 GCATGTCATCTTTGCGAGCAC 60.793 52.381 0.00 0.00 0.00 4.40
214 215 1.089920 ATGTCATCTTTGCGAGCACC 58.910 50.000 0.00 0.00 0.00 5.01
215 216 0.250252 TGTCATCTTTGCGAGCACCA 60.250 50.000 0.00 0.00 0.00 4.17
216 217 0.874390 GTCATCTTTGCGAGCACCAA 59.126 50.000 0.00 0.00 0.00 3.67
217 218 1.135859 GTCATCTTTGCGAGCACCAAG 60.136 52.381 0.00 0.01 0.00 3.61
218 219 1.159285 CATCTTTGCGAGCACCAAGA 58.841 50.000 12.73 12.73 30.44 3.02
219 220 1.135859 CATCTTTGCGAGCACCAAGAC 60.136 52.381 12.64 0.00 29.14 3.01
220 221 0.106708 TCTTTGCGAGCACCAAGACT 59.893 50.000 7.81 0.00 0.00 3.24
221 222 0.947244 CTTTGCGAGCACCAAGACTT 59.053 50.000 0.00 0.00 0.00 3.01
222 223 0.662619 TTTGCGAGCACCAAGACTTG 59.337 50.000 8.31 8.31 0.00 3.16
223 224 0.179059 TTGCGAGCACCAAGACTTGA 60.179 50.000 16.99 0.00 0.00 3.02
224 225 0.179059 TGCGAGCACCAAGACTTGAA 60.179 50.000 16.99 0.00 0.00 2.69
225 226 0.235926 GCGAGCACCAAGACTTGAAC 59.764 55.000 16.99 5.48 0.00 3.18
226 227 0.508641 CGAGCACCAAGACTTGAACG 59.491 55.000 16.99 10.03 0.00 3.95
227 228 0.235926 GAGCACCAAGACTTGAACGC 59.764 55.000 16.99 14.47 0.00 4.84
228 229 0.179045 AGCACCAAGACTTGAACGCT 60.179 50.000 16.99 16.30 0.00 5.07
229 230 0.040958 GCACCAAGACTTGAACGCTG 60.041 55.000 16.99 1.22 0.00 5.18
230 231 0.588252 CACCAAGACTTGAACGCTGG 59.412 55.000 16.99 0.96 0.00 4.85
231 232 1.166531 ACCAAGACTTGAACGCTGGC 61.167 55.000 16.99 0.00 0.00 4.85
232 233 1.205064 CAAGACTTGAACGCTGGCG 59.795 57.895 9.76 13.56 46.03 5.69
233 234 1.961277 AAGACTTGAACGCTGGCGG 60.961 57.895 18.99 3.52 44.69 6.13
234 235 3.423154 GACTTGAACGCTGGCGGG 61.423 66.667 18.99 6.34 44.69 6.13
237 238 3.950794 CTTGAACGCTGGCGGGCTA 62.951 63.158 18.99 6.62 44.69 3.93
238 239 3.950794 TTGAACGCTGGCGGGCTAG 62.951 63.158 18.99 0.00 44.69 3.42
242 243 4.241555 CGCTGGCGGGCTAGGAAT 62.242 66.667 7.12 0.00 35.56 3.01
243 244 2.867855 CGCTGGCGGGCTAGGAATA 61.868 63.158 7.12 0.00 35.56 1.75
244 245 1.301795 GCTGGCGGGCTAGGAATAC 60.302 63.158 6.17 0.00 0.00 1.89
245 246 1.371558 CTGGCGGGCTAGGAATACC 59.628 63.158 2.38 0.00 0.00 2.73
246 247 1.383386 TGGCGGGCTAGGAATACCA 60.383 57.895 2.38 0.00 38.94 3.25
247 248 1.070957 GGCGGGCTAGGAATACCAC 59.929 63.158 0.00 0.00 38.94 4.16
248 249 1.408453 GGCGGGCTAGGAATACCACT 61.408 60.000 0.00 0.00 38.94 4.00
249 250 0.249911 GCGGGCTAGGAATACCACTG 60.250 60.000 0.00 0.00 38.94 3.66
250 251 1.120530 CGGGCTAGGAATACCACTGT 58.879 55.000 0.00 0.00 38.94 3.55
251 252 1.068741 CGGGCTAGGAATACCACTGTC 59.931 57.143 0.00 0.00 38.94 3.51
252 253 1.416772 GGGCTAGGAATACCACTGTCC 59.583 57.143 0.00 0.00 38.94 4.02
253 254 2.116238 GGCTAGGAATACCACTGTCCA 58.884 52.381 0.00 0.00 38.94 4.02
254 255 2.706190 GGCTAGGAATACCACTGTCCAT 59.294 50.000 0.00 0.00 38.94 3.41
255 256 3.244249 GGCTAGGAATACCACTGTCCATC 60.244 52.174 0.00 0.00 38.94 3.51
256 257 3.643792 GCTAGGAATACCACTGTCCATCT 59.356 47.826 0.00 0.00 38.94 2.90
257 258 4.833380 GCTAGGAATACCACTGTCCATCTA 59.167 45.833 0.00 0.00 38.94 1.98
258 259 5.304614 GCTAGGAATACCACTGTCCATCTAA 59.695 44.000 0.00 0.00 38.94 2.10
259 260 5.615925 AGGAATACCACTGTCCATCTAAC 57.384 43.478 0.00 0.00 38.94 2.34
260 261 5.281314 AGGAATACCACTGTCCATCTAACT 58.719 41.667 0.00 0.00 38.94 2.24
261 262 6.441222 AGGAATACCACTGTCCATCTAACTA 58.559 40.000 0.00 0.00 38.94 2.24
262 263 7.076446 AGGAATACCACTGTCCATCTAACTAT 58.924 38.462 0.00 0.00 38.94 2.12
263 264 7.233757 AGGAATACCACTGTCCATCTAACTATC 59.766 40.741 0.00 0.00 38.94 2.08
264 265 6.919775 ATACCACTGTCCATCTAACTATCC 57.080 41.667 0.00 0.00 0.00 2.59
265 266 4.620723 ACCACTGTCCATCTAACTATCCA 58.379 43.478 0.00 0.00 0.00 3.41
266 267 5.030147 ACCACTGTCCATCTAACTATCCAA 58.970 41.667 0.00 0.00 0.00 3.53
267 268 5.104900 ACCACTGTCCATCTAACTATCCAAC 60.105 44.000 0.00 0.00 0.00 3.77
268 269 5.360591 CACTGTCCATCTAACTATCCAACC 58.639 45.833 0.00 0.00 0.00 3.77
269 270 5.030147 ACTGTCCATCTAACTATCCAACCA 58.970 41.667 0.00 0.00 0.00 3.67
270 271 5.104900 ACTGTCCATCTAACTATCCAACCAC 60.105 44.000 0.00 0.00 0.00 4.16
271 272 4.780554 TGTCCATCTAACTATCCAACCACA 59.219 41.667 0.00 0.00 0.00 4.17
272 273 5.104941 TGTCCATCTAACTATCCAACCACAG 60.105 44.000 0.00 0.00 0.00 3.66
273 274 4.408921 TCCATCTAACTATCCAACCACAGG 59.591 45.833 0.00 0.00 0.00 4.00
274 275 4.164221 CCATCTAACTATCCAACCACAGGT 59.836 45.833 0.00 0.00 37.65 4.00
284 285 4.025401 CCACAGGTTGGTTCGCGC 62.025 66.667 0.00 0.00 41.10 6.86
285 286 4.368808 CACAGGTTGGTTCGCGCG 62.369 66.667 26.76 26.76 0.00 6.86
286 287 4.595538 ACAGGTTGGTTCGCGCGA 62.596 61.111 31.40 31.40 0.00 5.87
287 288 3.118454 CAGGTTGGTTCGCGCGAT 61.118 61.111 35.21 14.43 0.00 4.58
288 289 3.118454 AGGTTGGTTCGCGCGATG 61.118 61.111 35.21 3.26 0.00 3.84
289 290 3.115892 GGTTGGTTCGCGCGATGA 61.116 61.111 35.21 17.95 0.00 2.92
290 291 2.673114 GGTTGGTTCGCGCGATGAA 61.673 57.895 35.21 22.31 0.00 2.57
291 292 1.423845 GTTGGTTCGCGCGATGAAT 59.576 52.632 35.21 0.00 0.00 2.57
292 293 0.179200 GTTGGTTCGCGCGATGAATT 60.179 50.000 35.21 0.00 0.00 2.17
293 294 0.096281 TTGGTTCGCGCGATGAATTC 59.904 50.000 35.21 18.41 0.00 2.17
294 295 0.739462 TGGTTCGCGCGATGAATTCT 60.739 50.000 35.21 0.00 0.00 2.40
295 296 0.373716 GGTTCGCGCGATGAATTCTT 59.626 50.000 35.21 0.00 0.00 2.52
296 297 1.202031 GGTTCGCGCGATGAATTCTTT 60.202 47.619 35.21 0.00 0.00 2.52
297 298 2.505866 GTTCGCGCGATGAATTCTTTT 58.494 42.857 35.21 0.00 0.00 2.27
298 299 2.892373 TCGCGCGATGAATTCTTTTT 57.108 40.000 31.40 0.00 0.00 1.94
299 300 2.504868 TCGCGCGATGAATTCTTTTTG 58.495 42.857 31.40 0.00 0.00 2.44
300 301 2.095969 TCGCGCGATGAATTCTTTTTGT 60.096 40.909 31.40 0.00 0.00 2.83
301 302 3.123790 TCGCGCGATGAATTCTTTTTGTA 59.876 39.130 31.40 0.00 0.00 2.41
302 303 3.843541 CGCGCGATGAATTCTTTTTGTAA 59.156 39.130 28.94 0.00 0.00 2.41
303 304 4.495472 CGCGCGATGAATTCTTTTTGTAAT 59.505 37.500 28.94 0.00 0.00 1.89
304 305 5.675012 CGCGCGATGAATTCTTTTTGTAATA 59.325 36.000 28.94 0.00 0.00 0.98
305 306 6.356977 CGCGCGATGAATTCTTTTTGTAATAT 59.643 34.615 28.94 0.00 0.00 1.28
306 307 7.529185 CGCGCGATGAATTCTTTTTGTAATATA 59.471 33.333 28.94 0.00 0.00 0.86
307 308 9.329913 GCGCGATGAATTCTTTTTGTAATATAT 57.670 29.630 12.10 0.00 0.00 0.86
336 337 8.588290 ATGGACAGTTTTGTAAATATTAGGCA 57.412 30.769 0.00 0.00 37.76 4.75
337 338 8.410673 TGGACAGTTTTGTAAATATTAGGCAA 57.589 30.769 0.00 0.00 37.76 4.52
338 339 8.861086 TGGACAGTTTTGTAAATATTAGGCAAA 58.139 29.630 7.48 7.48 37.76 3.68
339 340 9.135843 GGACAGTTTTGTAAATATTAGGCAAAC 57.864 33.333 9.87 7.74 37.76 2.93
340 341 9.685828 GACAGTTTTGTAAATATTAGGCAAACA 57.314 29.630 9.87 0.00 37.76 2.83
354 355 8.919777 ATTAGGCAAACATTATTCTAGTACCC 57.080 34.615 0.00 0.00 0.00 3.69
355 356 5.365619 AGGCAAACATTATTCTAGTACCCG 58.634 41.667 0.00 0.00 0.00 5.28
356 357 5.129815 AGGCAAACATTATTCTAGTACCCGA 59.870 40.000 0.00 0.00 0.00 5.14
357 358 5.235831 GGCAAACATTATTCTAGTACCCGAC 59.764 44.000 0.00 0.00 0.00 4.79
358 359 5.051240 GCAAACATTATTCTAGTACCCGACG 60.051 44.000 0.00 0.00 0.00 5.12
359 360 6.267817 CAAACATTATTCTAGTACCCGACGA 58.732 40.000 0.00 0.00 0.00 4.20
360 361 6.455360 AACATTATTCTAGTACCCGACGAA 57.545 37.500 0.00 0.00 0.00 3.85
361 362 5.825507 ACATTATTCTAGTACCCGACGAAC 58.174 41.667 0.00 0.00 0.00 3.95
362 363 5.357878 ACATTATTCTAGTACCCGACGAACA 59.642 40.000 0.00 0.00 0.00 3.18
363 364 5.895636 TTATTCTAGTACCCGACGAACAA 57.104 39.130 0.00 0.00 0.00 2.83
364 365 4.996788 ATTCTAGTACCCGACGAACAAT 57.003 40.909 0.00 0.00 0.00 2.71
365 366 4.789012 TTCTAGTACCCGACGAACAATT 57.211 40.909 0.00 0.00 0.00 2.32
366 367 4.789012 TCTAGTACCCGACGAACAATTT 57.211 40.909 0.00 0.00 0.00 1.82
367 368 5.138125 TCTAGTACCCGACGAACAATTTT 57.862 39.130 0.00 0.00 0.00 1.82
368 369 5.163513 TCTAGTACCCGACGAACAATTTTC 58.836 41.667 0.00 0.00 0.00 2.29
369 370 2.733026 AGTACCCGACGAACAATTTTCG 59.267 45.455 16.15 16.15 46.36 3.46
370 371 1.868469 ACCCGACGAACAATTTTCGA 58.132 45.000 21.41 0.00 43.97 3.71
371 372 2.211806 ACCCGACGAACAATTTTCGAA 58.788 42.857 21.41 0.00 43.97 3.71
372 373 2.222445 ACCCGACGAACAATTTTCGAAG 59.778 45.455 21.41 15.74 43.97 3.79
373 374 2.477375 CCCGACGAACAATTTTCGAAGA 59.523 45.455 21.41 0.00 43.97 2.87
374 375 3.466836 CCGACGAACAATTTTCGAAGAC 58.533 45.455 21.41 12.35 43.97 3.01
375 376 3.135909 CGACGAACAATTTTCGAAGACG 58.864 45.455 21.41 17.01 43.97 4.18
376 377 3.361339 CGACGAACAATTTTCGAAGACGT 60.361 43.478 21.41 0.00 43.97 4.34
377 378 3.857194 ACGAACAATTTTCGAAGACGTG 58.143 40.909 21.41 0.00 43.97 4.49
378 379 3.215244 CGAACAATTTTCGAAGACGTGG 58.785 45.455 13.87 0.00 43.97 4.94
379 380 3.302870 CGAACAATTTTCGAAGACGTGGT 60.303 43.478 13.87 0.00 43.97 4.16
380 381 3.602390 ACAATTTTCGAAGACGTGGTG 57.398 42.857 0.00 0.00 40.69 4.17
381 382 3.199677 ACAATTTTCGAAGACGTGGTGA 58.800 40.909 0.00 0.00 40.69 4.02
382 383 3.623960 ACAATTTTCGAAGACGTGGTGAA 59.376 39.130 0.00 0.00 40.69 3.18
383 384 3.872560 ATTTTCGAAGACGTGGTGAAC 57.127 42.857 0.00 0.00 40.69 3.18
384 385 2.296831 TTTCGAAGACGTGGTGAACA 57.703 45.000 0.00 0.00 40.69 3.18
385 386 1.563111 TTCGAAGACGTGGTGAACAC 58.437 50.000 0.00 0.00 46.78 3.32
396 397 4.918810 GTGGTGAACACTTTTCCAATCT 57.081 40.909 0.00 0.00 46.72 2.40
397 398 4.610945 GTGGTGAACACTTTTCCAATCTG 58.389 43.478 0.00 0.00 46.72 2.90
398 399 3.068024 TGGTGAACACTTTTCCAATCTGC 59.932 43.478 4.96 0.00 0.00 4.26
399 400 3.300009 GTGAACACTTTTCCAATCTGCG 58.700 45.455 0.00 0.00 0.00 5.18
400 401 3.003275 GTGAACACTTTTCCAATCTGCGA 59.997 43.478 0.00 0.00 0.00 5.10
401 402 3.820467 TGAACACTTTTCCAATCTGCGAT 59.180 39.130 0.00 0.00 0.00 4.58
402 403 4.278170 TGAACACTTTTCCAATCTGCGATT 59.722 37.500 0.00 0.00 0.00 3.34
403 404 5.471797 TGAACACTTTTCCAATCTGCGATTA 59.528 36.000 3.96 0.00 0.00 1.75
404 405 5.957842 ACACTTTTCCAATCTGCGATTAA 57.042 34.783 3.96 0.00 0.00 1.40
405 406 5.699839 ACACTTTTCCAATCTGCGATTAAC 58.300 37.500 3.96 0.00 0.00 2.01
406 407 5.240623 ACACTTTTCCAATCTGCGATTAACA 59.759 36.000 3.96 0.00 0.00 2.41
407 408 6.071952 ACACTTTTCCAATCTGCGATTAACAT 60.072 34.615 3.96 0.00 0.00 2.71
408 409 6.470235 CACTTTTCCAATCTGCGATTAACATC 59.530 38.462 3.96 0.00 0.00 3.06
409 410 6.375455 ACTTTTCCAATCTGCGATTAACATCT 59.625 34.615 3.96 0.00 0.00 2.90
410 411 6.757897 TTTCCAATCTGCGATTAACATCTT 57.242 33.333 3.96 0.00 0.00 2.40
411 412 6.757897 TTCCAATCTGCGATTAACATCTTT 57.242 33.333 3.96 0.00 0.00 2.52
412 413 6.757897 TCCAATCTGCGATTAACATCTTTT 57.242 33.333 3.96 0.00 0.00 2.27
413 414 6.785191 TCCAATCTGCGATTAACATCTTTTC 58.215 36.000 3.96 0.00 0.00 2.29
414 415 5.973565 CCAATCTGCGATTAACATCTTTTCC 59.026 40.000 3.96 0.00 0.00 3.13
415 416 6.183360 CCAATCTGCGATTAACATCTTTTCCT 60.183 38.462 3.96 0.00 0.00 3.36
416 417 7.012327 CCAATCTGCGATTAACATCTTTTCCTA 59.988 37.037 3.96 0.00 0.00 2.94
417 418 8.397906 CAATCTGCGATTAACATCTTTTCCTAA 58.602 33.333 3.96 0.00 0.00 2.69
418 419 8.682936 ATCTGCGATTAACATCTTTTCCTAAT 57.317 30.769 0.00 0.00 0.00 1.73
419 420 9.778741 ATCTGCGATTAACATCTTTTCCTAATA 57.221 29.630 0.00 0.00 0.00 0.98
420 421 9.042008 TCTGCGATTAACATCTTTTCCTAATAC 57.958 33.333 0.00 0.00 0.00 1.89
421 422 8.149973 TGCGATTAACATCTTTTCCTAATACC 57.850 34.615 0.00 0.00 0.00 2.73
422 423 7.227910 TGCGATTAACATCTTTTCCTAATACCC 59.772 37.037 0.00 0.00 0.00 3.69
423 424 7.570691 GCGATTAACATCTTTTCCTAATACCCG 60.571 40.741 0.00 0.00 0.00 5.28
424 425 7.654520 CGATTAACATCTTTTCCTAATACCCGA 59.345 37.037 0.00 0.00 0.00 5.14
425 426 8.672823 ATTAACATCTTTTCCTAATACCCGAC 57.327 34.615 0.00 0.00 0.00 4.79
426 427 5.687166 ACATCTTTTCCTAATACCCGACA 57.313 39.130 0.00 0.00 0.00 4.35
427 428 6.057321 ACATCTTTTCCTAATACCCGACAA 57.943 37.500 0.00 0.00 0.00 3.18
428 429 6.659824 ACATCTTTTCCTAATACCCGACAAT 58.340 36.000 0.00 0.00 0.00 2.71
429 430 7.116736 ACATCTTTTCCTAATACCCGACAATT 58.883 34.615 0.00 0.00 0.00 2.32
430 431 7.614192 ACATCTTTTCCTAATACCCGACAATTT 59.386 33.333 0.00 0.00 0.00 1.82
431 432 8.466798 CATCTTTTCCTAATACCCGACAATTTT 58.533 33.333 0.00 0.00 0.00 1.82
432 433 8.411991 TCTTTTCCTAATACCCGACAATTTTT 57.588 30.769 0.00 0.00 0.00 1.94
456 457 8.522178 TTTTTCAAATACGCCGTGATATTTTT 57.478 26.923 0.00 0.00 30.31 1.94
457 458 7.728580 TTTCAAATACGCCGTGATATTTTTC 57.271 32.000 0.00 0.00 30.31 2.29
458 459 6.424176 TCAAATACGCCGTGATATTTTTCA 57.576 33.333 0.00 0.00 30.31 2.69
459 460 6.843208 TCAAATACGCCGTGATATTTTTCAA 58.157 32.000 0.00 0.00 30.31 2.69
460 461 7.306213 TCAAATACGCCGTGATATTTTTCAAA 58.694 30.769 0.00 0.00 30.31 2.69
461 462 7.971168 TCAAATACGCCGTGATATTTTTCAAAT 59.029 29.630 0.00 0.00 30.31 2.32
462 463 9.227490 CAAATACGCCGTGATATTTTTCAAATA 57.773 29.630 0.00 0.00 30.31 1.40
463 464 8.776680 AATACGCCGTGATATTTTTCAAATAC 57.223 30.769 0.00 0.00 0.00 1.89
464 465 6.184580 ACGCCGTGATATTTTTCAAATACA 57.815 33.333 0.00 0.00 0.00 2.29
465 466 6.791303 ACGCCGTGATATTTTTCAAATACAT 58.209 32.000 0.00 0.00 0.00 2.29
466 467 6.910433 ACGCCGTGATATTTTTCAAATACATC 59.090 34.615 0.00 0.00 0.00 3.06
467 468 6.909895 CGCCGTGATATTTTTCAAATACATCA 59.090 34.615 0.00 0.00 0.00 3.07
470 471 9.949174 CCGTGATATTTTTCAAATACATCATGA 57.051 29.630 0.00 0.00 0.00 3.07
492 493 6.686630 TGACCATTTTTCAAATAAGCGATGT 58.313 32.000 0.00 0.00 0.00 3.06
599 601 2.428890 ACTTCTTCCAGATACTCCGCTG 59.571 50.000 0.00 0.00 0.00 5.18
874 877 4.842091 CATGCAAAGCTCGCCGCC 62.842 66.667 5.69 0.00 40.39 6.13
887 890 3.157949 CCGCCCCTCCTTCTCCTC 61.158 72.222 0.00 0.00 0.00 3.71
907 913 6.576185 TCCTCAAACTCCGTATAAATACCAC 58.424 40.000 0.00 0.00 0.00 4.16
980 987 2.475111 CGCTAGCGTTTGAGAGAACAAA 59.525 45.455 28.66 0.00 37.41 2.83
981 988 3.059868 CGCTAGCGTTTGAGAGAACAAAA 60.060 43.478 28.66 0.00 40.62 2.44
982 989 4.551990 CGCTAGCGTTTGAGAGAACAAAAA 60.552 41.667 28.66 0.00 40.62 1.94
983 990 4.671068 GCTAGCGTTTGAGAGAACAAAAAC 59.329 41.667 0.00 0.00 40.62 2.43
984 991 4.695217 AGCGTTTGAGAGAACAAAAACA 57.305 36.364 0.00 0.00 40.62 2.83
986 993 4.156008 AGCGTTTGAGAGAACAAAAACAGT 59.844 37.500 0.00 0.00 40.62 3.55
989 996 5.391523 CGTTTGAGAGAACAAAAACAGTCCA 60.392 40.000 0.00 0.00 40.62 4.02
990 997 5.560966 TTGAGAGAACAAAAACAGTCCAC 57.439 39.130 0.00 0.00 0.00 4.02
1243 1251 0.387929 CATGGGCATCATCAACAGCC 59.612 55.000 0.00 0.00 46.28 4.85
1297 1305 1.981256 CTGTAAGCCAACACAACCCT 58.019 50.000 0.00 0.00 0.00 4.34
1351 1366 2.704725 ACCACTGCTTTGTTTATGCG 57.295 45.000 0.00 0.00 0.00 4.73
1382 1397 6.652900 AGTTTTCTAAGCTTGATTCTGTCTCC 59.347 38.462 9.86 0.00 0.00 3.71
1390 1405 4.764308 GCTTGATTCTGTCTCCTTTTTCCT 59.236 41.667 0.00 0.00 0.00 3.36
1436 1451 3.562869 GGAACGAAGAAACGATGCG 57.437 52.632 0.00 0.00 37.03 4.73
1440 1455 1.337821 ACGAAGAAACGATGCGAGTC 58.662 50.000 0.00 0.00 37.03 3.36
1588 1603 7.960738 ACACGTTAATAAAATGGACGATTTGAG 59.039 33.333 0.94 0.00 34.30 3.02
1595 1610 2.750888 GGACGATTTGAGGCACGGC 61.751 63.158 0.00 0.00 0.00 5.68
1608 1673 0.796927 GCACGGCCTCTCACTTTAAC 59.203 55.000 0.00 0.00 0.00 2.01
1612 1677 1.550976 CGGCCTCTCACTTTAACCTCT 59.449 52.381 0.00 0.00 0.00 3.69
1620 1685 4.816385 TCTCACTTTAACCTCTGCACTTTG 59.184 41.667 0.00 0.00 0.00 2.77
1621 1686 4.523083 TCACTTTAACCTCTGCACTTTGT 58.477 39.130 0.00 0.00 0.00 2.83
1622 1687 4.947388 TCACTTTAACCTCTGCACTTTGTT 59.053 37.500 0.00 0.00 0.00 2.83
1623 1688 5.417580 TCACTTTAACCTCTGCACTTTGTTT 59.582 36.000 0.00 0.00 0.00 2.83
1643 1708 6.437928 TGTTTTTCATTCAAACTCGATGGAG 58.562 36.000 2.78 2.78 46.13 3.86
1644 1709 4.685169 TTTCATTCAAACTCGATGGAGC 57.315 40.909 4.41 0.00 44.48 4.70
1651 1716 0.539051 AACTCGATGGAGCTGGAAGG 59.461 55.000 4.41 0.00 44.48 3.46
1693 1758 3.055021 TCCACATGGCCACGTAGAAATAA 60.055 43.478 8.16 0.00 34.44 1.40
1694 1759 3.692101 CCACATGGCCACGTAGAAATAAA 59.308 43.478 8.16 0.00 0.00 1.40
1695 1760 4.438200 CCACATGGCCACGTAGAAATAAAC 60.438 45.833 8.16 0.00 0.00 2.01
1697 1762 4.155280 ACATGGCCACGTAGAAATAAACAC 59.845 41.667 8.16 0.00 0.00 3.32
1698 1763 4.010667 TGGCCACGTAGAAATAAACACT 57.989 40.909 0.00 0.00 0.00 3.55
1700 1765 3.998341 GGCCACGTAGAAATAAACACTCA 59.002 43.478 0.00 0.00 0.00 3.41
1701 1766 4.453136 GGCCACGTAGAAATAAACACTCAA 59.547 41.667 0.00 0.00 0.00 3.02
1707 1798 4.096732 AGAAATAAACACTCAATGCCGC 57.903 40.909 0.00 0.00 0.00 6.53
1782 1904 1.642037 CTGATGCAAGGTGGCGACTG 61.642 60.000 0.00 0.00 36.28 3.51
1835 1959 6.428159 GGTGACCATGAGTCCATAATATGAAC 59.572 42.308 1.10 0.00 45.68 3.18
1844 1968 5.241506 AGTCCATAATATGAACGCCAATTGG 59.758 40.000 20.81 20.81 38.53 3.16
1866 1990 6.889198 TGGGATATCTCACAAAGAACCTTAG 58.111 40.000 0.00 0.00 37.61 2.18
1867 1991 6.443849 TGGGATATCTCACAAAGAACCTTAGT 59.556 38.462 0.00 0.00 37.61 2.24
1885 2009 6.108687 CCTTAGTATGATGTCTGCAAACTCA 58.891 40.000 0.00 0.00 0.00 3.41
1911 2035 6.780457 AAACTTAGCATGCAATCCATTAGT 57.220 33.333 21.98 4.30 29.71 2.24
1918 2042 9.791801 TTAGCATGCAATCCATTAGTTTAGATA 57.208 29.630 21.98 0.00 29.71 1.98
1971 2101 0.679640 TGCCTAAAGTGGGATTGCGG 60.680 55.000 0.00 0.00 0.00 5.69
1983 2113 1.693083 GATTGCGGCACCGAGTACAC 61.693 60.000 14.43 0.00 42.83 2.90
1994 2124 4.562082 CACCGAGTACACAATGGAACTTA 58.438 43.478 0.00 0.00 0.00 2.24
1998 2128 6.015180 ACCGAGTACACAATGGAACTTACTAA 60.015 38.462 0.00 0.00 0.00 2.24
2001 2131 7.544566 CGAGTACACAATGGAACTTACTAACAT 59.455 37.037 0.00 0.00 0.00 2.71
2036 2166 7.929941 AACAAAAGAGGATAATGAGACCTTC 57.070 36.000 0.00 0.00 33.89 3.46
2192 2322 1.228675 AAGGCCTCCTGTTTGCTGG 60.229 57.895 5.23 0.00 32.13 4.85
2197 2327 0.397941 CCTCCTGTTTGCTGGTGAGA 59.602 55.000 0.00 0.00 35.49 3.27
2257 2387 1.635817 ATGCACGCCTGGGGTAAGAT 61.636 55.000 16.64 5.94 0.00 2.40
2268 2398 1.559682 GGGGTAAGATCTCACCTGCAA 59.440 52.381 15.00 0.00 35.04 4.08
2273 2403 4.333926 GGTAAGATCTCACCTGCAAATCAC 59.666 45.833 7.92 0.00 0.00 3.06
2362 2520 3.600388 CGTGCTCCTTCCATAGAGTTTT 58.400 45.455 0.00 0.00 32.47 2.43
2364 2522 4.579869 GTGCTCCTTCCATAGAGTTTTGA 58.420 43.478 0.00 0.00 32.47 2.69
2365 2523 5.003804 GTGCTCCTTCCATAGAGTTTTGAA 58.996 41.667 0.00 0.00 32.47 2.69
2368 2526 5.473504 GCTCCTTCCATAGAGTTTTGAAACA 59.526 40.000 9.08 0.00 41.30 2.83
2374 2532 7.630242 TCCATAGAGTTTTGAAACATCATCC 57.370 36.000 9.08 0.00 41.30 3.51
2399 2557 6.462207 CCAAATTCCACATACCAAACAACAGA 60.462 38.462 0.00 0.00 0.00 3.41
2403 2561 4.578516 TCCACATACCAAACAACAGAAGTG 59.421 41.667 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.739498 TCAGGTACTTTCATTTCTTGGTAAC 57.261 36.000 0.00 0.00 34.60 2.50
19 20 8.999431 CACGCCAACTAAATTATATTATCAGGT 58.001 33.333 0.00 0.00 0.00 4.00
20 21 7.962918 GCACGCCAACTAAATTATATTATCAGG 59.037 37.037 0.00 0.00 0.00 3.86
21 22 7.688167 CGCACGCCAACTAAATTATATTATCAG 59.312 37.037 0.00 0.00 0.00 2.90
22 23 7.514805 CGCACGCCAACTAAATTATATTATCA 58.485 34.615 0.00 0.00 0.00 2.15
23 24 6.464834 GCGCACGCCAACTAAATTATATTATC 59.535 38.462 0.30 0.00 34.56 1.75
24 25 6.311723 GCGCACGCCAACTAAATTATATTAT 58.688 36.000 0.30 0.00 34.56 1.28
25 26 5.612925 CGCGCACGCCAACTAAATTATATTA 60.613 40.000 8.75 0.00 37.98 0.98
26 27 4.533222 GCGCACGCCAACTAAATTATATT 58.467 39.130 0.30 0.00 34.56 1.28
27 28 3.363575 CGCGCACGCCAACTAAATTATAT 60.364 43.478 8.75 0.00 37.98 0.86
28 29 2.033577 CGCGCACGCCAACTAAATTATA 60.034 45.455 8.75 0.00 37.98 0.98
29 30 1.267832 CGCGCACGCCAACTAAATTAT 60.268 47.619 8.75 0.00 37.98 1.28
30 31 0.095589 CGCGCACGCCAACTAAATTA 59.904 50.000 8.75 0.00 37.98 1.40
31 32 1.154301 CGCGCACGCCAACTAAATT 60.154 52.632 8.75 0.00 37.98 1.82
32 33 1.966493 CTCGCGCACGCCAACTAAAT 61.966 55.000 8.75 0.00 39.84 1.40
33 34 2.662196 TCGCGCACGCCAACTAAA 60.662 55.556 8.75 0.00 39.84 1.85
34 35 3.109547 CTCGCGCACGCCAACTAA 61.110 61.111 8.75 0.00 39.84 2.24
40 41 1.758319 TATTAAAGCTCGCGCACGCC 61.758 55.000 8.75 0.00 39.84 5.68
41 42 0.025770 TTATTAAAGCTCGCGCACGC 59.974 50.000 8.75 9.28 39.84 5.34
42 43 2.645628 ATTATTAAAGCTCGCGCACG 57.354 45.000 8.75 0.00 39.10 5.34
43 44 3.035942 CCAATTATTAAAGCTCGCGCAC 58.964 45.455 8.75 0.00 39.10 5.34
44 45 2.680841 ACCAATTATTAAAGCTCGCGCA 59.319 40.909 8.75 0.00 39.10 6.09
45 46 3.289076 GACCAATTATTAAAGCTCGCGC 58.711 45.455 0.00 0.00 0.00 6.86
46 47 3.311322 TGGACCAATTATTAAAGCTCGCG 59.689 43.478 0.00 0.00 0.00 5.87
47 48 4.893424 TGGACCAATTATTAAAGCTCGC 57.107 40.909 0.00 0.00 0.00 5.03
58 59 9.671279 CTGCTGATACATATATTGGACCAATTA 57.329 33.333 24.48 15.84 35.54 1.40
59 60 7.613022 CCTGCTGATACATATATTGGACCAATT 59.387 37.037 24.48 14.33 35.54 2.32
60 61 7.114754 CCTGCTGATACATATATTGGACCAAT 58.885 38.462 23.00 23.00 37.80 3.16
61 62 6.475504 CCTGCTGATACATATATTGGACCAA 58.524 40.000 9.92 9.92 0.00 3.67
62 63 5.045651 CCCTGCTGATACATATATTGGACCA 60.046 44.000 0.00 0.00 0.00 4.02
63 64 5.189736 TCCCTGCTGATACATATATTGGACC 59.810 44.000 0.00 0.00 0.00 4.46
64 65 6.299805 TCCCTGCTGATACATATATTGGAC 57.700 41.667 0.00 0.00 0.00 4.02
65 66 7.037370 ACAATCCCTGCTGATACATATATTGGA 60.037 37.037 0.00 0.00 0.00 3.53
66 67 7.066645 CACAATCCCTGCTGATACATATATTGG 59.933 40.741 0.00 0.00 0.00 3.16
67 68 7.066645 CCACAATCCCTGCTGATACATATATTG 59.933 40.741 0.00 0.00 0.00 1.90
68 69 7.114754 CCACAATCCCTGCTGATACATATATT 58.885 38.462 0.00 0.00 0.00 1.28
69 70 6.353342 CCCACAATCCCTGCTGATACATATAT 60.353 42.308 0.00 0.00 0.00 0.86
70 71 5.045651 CCCACAATCCCTGCTGATACATATA 60.046 44.000 0.00 0.00 0.00 0.86
71 72 4.263639 CCCACAATCCCTGCTGATACATAT 60.264 45.833 0.00 0.00 0.00 1.78
72 73 3.072915 CCCACAATCCCTGCTGATACATA 59.927 47.826 0.00 0.00 0.00 2.29
73 74 2.158564 CCCACAATCCCTGCTGATACAT 60.159 50.000 0.00 0.00 0.00 2.29
74 75 1.212688 CCCACAATCCCTGCTGATACA 59.787 52.381 0.00 0.00 0.00 2.29
75 76 1.212935 ACCCACAATCCCTGCTGATAC 59.787 52.381 0.00 0.00 0.00 2.24
76 77 1.212688 CACCCACAATCCCTGCTGATA 59.787 52.381 0.00 0.00 0.00 2.15
77 78 0.033796 CACCCACAATCCCTGCTGAT 60.034 55.000 0.00 0.00 0.00 2.90
78 79 1.379916 CACCCACAATCCCTGCTGA 59.620 57.895 0.00 0.00 0.00 4.26
79 80 0.327924 TACACCCACAATCCCTGCTG 59.672 55.000 0.00 0.00 0.00 4.41
80 81 1.072266 TTACACCCACAATCCCTGCT 58.928 50.000 0.00 0.00 0.00 4.24
81 82 2.143876 ATTACACCCACAATCCCTGC 57.856 50.000 0.00 0.00 0.00 4.85
82 83 3.430453 ACAATTACACCCACAATCCCTG 58.570 45.455 0.00 0.00 0.00 4.45
83 84 3.825908 ACAATTACACCCACAATCCCT 57.174 42.857 0.00 0.00 0.00 4.20
84 85 4.595986 ACTACAATTACACCCACAATCCC 58.404 43.478 0.00 0.00 0.00 3.85
85 86 6.315393 CACTACTACAATTACACCCACAATCC 59.685 42.308 0.00 0.00 0.00 3.01
86 87 7.101054 TCACTACTACAATTACACCCACAATC 58.899 38.462 0.00 0.00 0.00 2.67
87 88 7.011499 TCACTACTACAATTACACCCACAAT 57.989 36.000 0.00 0.00 0.00 2.71
88 89 6.422344 TCACTACTACAATTACACCCACAA 57.578 37.500 0.00 0.00 0.00 3.33
89 90 6.014070 ACATCACTACTACAATTACACCCACA 60.014 38.462 0.00 0.00 0.00 4.17
90 91 6.403878 ACATCACTACTACAATTACACCCAC 58.596 40.000 0.00 0.00 0.00 4.61
91 92 6.351541 GGACATCACTACTACAATTACACCCA 60.352 42.308 0.00 0.00 0.00 4.51
92 93 6.047231 GGACATCACTACTACAATTACACCC 58.953 44.000 0.00 0.00 0.00 4.61
93 94 6.047231 GGGACATCACTACTACAATTACACC 58.953 44.000 0.00 0.00 0.00 4.16
94 95 6.047231 GGGGACATCACTACTACAATTACAC 58.953 44.000 0.00 0.00 0.00 2.90
95 96 5.722441 TGGGGACATCACTACTACAATTACA 59.278 40.000 0.00 0.00 33.40 2.41
96 97 6.229936 TGGGGACATCACTACTACAATTAC 57.770 41.667 0.00 0.00 33.40 1.89
113 114 3.389329 AGATGAGTGTATGTGATGGGGAC 59.611 47.826 0.00 0.00 0.00 4.46
114 115 3.643320 GAGATGAGTGTATGTGATGGGGA 59.357 47.826 0.00 0.00 0.00 4.81
115 116 3.645212 AGAGATGAGTGTATGTGATGGGG 59.355 47.826 0.00 0.00 0.00 4.96
116 117 4.952071 AGAGATGAGTGTATGTGATGGG 57.048 45.455 0.00 0.00 0.00 4.00
117 118 7.224522 TCATAGAGATGAGTGTATGTGATGG 57.775 40.000 0.00 0.00 37.15 3.51
118 119 7.325579 CGTTCATAGAGATGAGTGTATGTGATG 59.674 40.741 0.00 0.00 43.03 3.07
119 120 7.366513 CGTTCATAGAGATGAGTGTATGTGAT 58.633 38.462 0.00 0.00 43.03 3.06
120 121 6.729187 CGTTCATAGAGATGAGTGTATGTGA 58.271 40.000 0.00 0.00 43.03 3.58
121 122 5.400782 GCGTTCATAGAGATGAGTGTATGTG 59.599 44.000 0.00 0.00 43.03 3.21
122 123 5.067805 TGCGTTCATAGAGATGAGTGTATGT 59.932 40.000 0.00 0.00 43.03 2.29
123 124 5.400782 GTGCGTTCATAGAGATGAGTGTATG 59.599 44.000 0.00 0.00 43.03 2.39
124 125 5.067805 TGTGCGTTCATAGAGATGAGTGTAT 59.932 40.000 0.00 0.00 43.03 2.29
125 126 4.398044 TGTGCGTTCATAGAGATGAGTGTA 59.602 41.667 0.00 0.00 43.03 2.90
126 127 3.193479 TGTGCGTTCATAGAGATGAGTGT 59.807 43.478 0.00 0.00 43.03 3.55
127 128 3.549471 GTGTGCGTTCATAGAGATGAGTG 59.451 47.826 0.00 0.00 43.03 3.51
128 129 3.193479 TGTGTGCGTTCATAGAGATGAGT 59.807 43.478 0.00 0.00 43.03 3.41
129 130 3.549471 GTGTGTGCGTTCATAGAGATGAG 59.451 47.826 0.00 0.00 43.03 2.90
130 131 3.056891 TGTGTGTGCGTTCATAGAGATGA 60.057 43.478 0.00 0.00 40.45 2.92
131 132 3.061295 GTGTGTGTGCGTTCATAGAGATG 59.939 47.826 0.00 0.00 0.00 2.90
132 133 3.254060 GTGTGTGTGCGTTCATAGAGAT 58.746 45.455 0.00 0.00 0.00 2.75
133 134 2.672714 GTGTGTGTGCGTTCATAGAGA 58.327 47.619 0.00 0.00 0.00 3.10
134 135 1.386748 CGTGTGTGTGCGTTCATAGAG 59.613 52.381 0.00 0.00 0.00 2.43
135 136 1.414378 CGTGTGTGTGCGTTCATAGA 58.586 50.000 0.00 0.00 0.00 1.98
136 137 0.179250 GCGTGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 0.00 2.23
137 138 0.876342 TGCGTGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 0.00 2.15
138 139 1.506309 ATGCGTGTGTGTGCGTTCAT 61.506 50.000 0.00 0.00 0.00 2.57
139 140 2.100024 GATGCGTGTGTGTGCGTTCA 62.100 55.000 0.00 0.00 0.00 3.18
140 141 1.438710 GATGCGTGTGTGTGCGTTC 60.439 57.895 0.00 0.00 0.00 3.95
141 142 2.631428 GATGCGTGTGTGTGCGTT 59.369 55.556 0.00 0.00 0.00 4.84
142 143 2.428960 TAGGATGCGTGTGTGTGCGT 62.429 55.000 0.00 0.00 0.00 5.24
143 144 1.083806 ATAGGATGCGTGTGTGTGCG 61.084 55.000 0.00 0.00 0.00 5.34
144 145 0.652592 GATAGGATGCGTGTGTGTGC 59.347 55.000 0.00 0.00 0.00 4.57
145 146 1.290203 GGATAGGATGCGTGTGTGTG 58.710 55.000 0.00 0.00 0.00 3.82
146 147 0.178068 GGGATAGGATGCGTGTGTGT 59.822 55.000 0.00 0.00 0.00 3.72
147 148 0.465705 AGGGATAGGATGCGTGTGTG 59.534 55.000 0.00 0.00 0.00 3.82
148 149 2.082140 TAGGGATAGGATGCGTGTGT 57.918 50.000 0.00 0.00 0.00 3.72
149 150 2.562738 TCATAGGGATAGGATGCGTGTG 59.437 50.000 0.00 0.00 0.00 3.82
150 151 2.828520 CTCATAGGGATAGGATGCGTGT 59.171 50.000 0.00 0.00 0.00 4.49
151 152 2.417924 GCTCATAGGGATAGGATGCGTG 60.418 54.545 0.00 0.00 0.00 5.34
152 153 1.827969 GCTCATAGGGATAGGATGCGT 59.172 52.381 0.00 0.00 0.00 5.24
153 154 1.827344 TGCTCATAGGGATAGGATGCG 59.173 52.381 0.00 0.00 0.00 4.73
154 155 2.568956 TGTGCTCATAGGGATAGGATGC 59.431 50.000 0.00 0.00 0.00 3.91
155 156 4.141756 GGATGTGCTCATAGGGATAGGATG 60.142 50.000 0.32 0.00 34.06 3.51
156 157 4.036518 GGATGTGCTCATAGGGATAGGAT 58.963 47.826 0.32 0.00 34.06 3.24
157 158 3.445008 GGATGTGCTCATAGGGATAGGA 58.555 50.000 0.32 0.00 34.06 2.94
158 159 2.167281 CGGATGTGCTCATAGGGATAGG 59.833 54.545 0.32 0.00 34.06 2.57
159 160 3.092301 TCGGATGTGCTCATAGGGATAG 58.908 50.000 0.32 0.00 34.06 2.08
160 161 3.092301 CTCGGATGTGCTCATAGGGATA 58.908 50.000 0.32 0.00 34.06 2.59
161 162 1.898472 CTCGGATGTGCTCATAGGGAT 59.102 52.381 0.32 0.00 34.06 3.85
162 163 1.133482 TCTCGGATGTGCTCATAGGGA 60.133 52.381 0.32 1.98 34.06 4.20
163 164 1.271934 CTCTCGGATGTGCTCATAGGG 59.728 57.143 0.32 0.00 34.06 3.53
164 165 1.336702 GCTCTCGGATGTGCTCATAGG 60.337 57.143 0.32 0.00 34.06 2.57
165 166 1.612950 AGCTCTCGGATGTGCTCATAG 59.387 52.381 0.32 0.00 32.18 2.23
166 167 1.697284 AGCTCTCGGATGTGCTCATA 58.303 50.000 0.32 0.00 32.18 2.15
167 168 0.829333 AAGCTCTCGGATGTGCTCAT 59.171 50.000 0.00 0.00 36.00 2.90
168 169 0.108472 CAAGCTCTCGGATGTGCTCA 60.108 55.000 0.00 0.00 36.00 4.26
169 170 0.174389 TCAAGCTCTCGGATGTGCTC 59.826 55.000 0.00 0.00 36.00 4.26
170 171 0.175302 CTCAAGCTCTCGGATGTGCT 59.825 55.000 0.00 0.00 38.25 4.40
171 172 0.809241 CCTCAAGCTCTCGGATGTGC 60.809 60.000 0.00 0.00 0.00 4.57
172 173 0.809241 GCCTCAAGCTCTCGGATGTG 60.809 60.000 0.00 0.00 38.99 3.21
173 174 1.519719 GCCTCAAGCTCTCGGATGT 59.480 57.895 0.00 0.00 38.99 3.06
174 175 1.591059 CGCCTCAAGCTCTCGGATG 60.591 63.158 0.00 0.00 40.39 3.51
175 176 2.790791 CCGCCTCAAGCTCTCGGAT 61.791 63.158 6.30 0.00 42.43 4.18
176 177 3.452786 CCGCCTCAAGCTCTCGGA 61.453 66.667 6.30 0.00 42.43 4.55
178 179 3.729965 ATGCCGCCTCAAGCTCTCG 62.730 63.158 0.00 0.00 40.39 4.04
179 180 2.178890 CATGCCGCCTCAAGCTCTC 61.179 63.158 0.00 0.00 40.39 3.20
180 181 2.124819 CATGCCGCCTCAAGCTCT 60.125 61.111 0.00 0.00 40.39 4.09
181 182 2.437359 ACATGCCGCCTCAAGCTC 60.437 61.111 0.00 0.00 40.39 4.09
182 183 2.437359 GACATGCCGCCTCAAGCT 60.437 61.111 0.00 0.00 40.39 3.74
183 184 2.056481 GATGACATGCCGCCTCAAGC 62.056 60.000 0.00 0.00 38.52 4.01
184 185 0.463295 AGATGACATGCCGCCTCAAG 60.463 55.000 0.00 0.00 0.00 3.02
185 186 0.035152 AAGATGACATGCCGCCTCAA 60.035 50.000 0.00 0.00 0.00 3.02
186 187 0.035152 AAAGATGACATGCCGCCTCA 60.035 50.000 0.00 0.00 0.00 3.86
187 188 0.379669 CAAAGATGACATGCCGCCTC 59.620 55.000 0.00 0.00 0.00 4.70
188 189 1.660560 GCAAAGATGACATGCCGCCT 61.661 55.000 0.00 0.00 34.03 5.52
189 190 1.226773 GCAAAGATGACATGCCGCC 60.227 57.895 0.00 0.00 34.03 6.13
190 191 1.584483 CGCAAAGATGACATGCCGC 60.584 57.895 0.00 0.00 36.75 6.53
191 192 0.027194 CTCGCAAAGATGACATGCCG 59.973 55.000 0.00 0.00 36.75 5.69
192 193 0.248377 GCTCGCAAAGATGACATGCC 60.248 55.000 0.00 0.00 36.75 4.40
193 194 0.448990 TGCTCGCAAAGATGACATGC 59.551 50.000 0.00 0.00 36.74 4.06
194 195 1.202110 GGTGCTCGCAAAGATGACATG 60.202 52.381 0.00 0.00 0.00 3.21
195 196 1.089920 GGTGCTCGCAAAGATGACAT 58.910 50.000 0.00 0.00 0.00 3.06
196 197 0.250252 TGGTGCTCGCAAAGATGACA 60.250 50.000 0.00 0.00 0.00 3.58
197 198 0.874390 TTGGTGCTCGCAAAGATGAC 59.126 50.000 0.00 0.00 0.00 3.06
198 199 1.159285 CTTGGTGCTCGCAAAGATGA 58.841 50.000 0.00 0.00 0.00 2.92
199 200 1.135859 GTCTTGGTGCTCGCAAAGATG 60.136 52.381 8.70 0.00 0.00 2.90
200 201 1.160137 GTCTTGGTGCTCGCAAAGAT 58.840 50.000 8.70 0.00 0.00 2.40
201 202 0.106708 AGTCTTGGTGCTCGCAAAGA 59.893 50.000 2.75 2.75 0.00 2.52
202 203 0.947244 AAGTCTTGGTGCTCGCAAAG 59.053 50.000 0.00 0.00 0.00 2.77
203 204 0.662619 CAAGTCTTGGTGCTCGCAAA 59.337 50.000 4.52 0.00 0.00 3.68
204 205 0.179059 TCAAGTCTTGGTGCTCGCAA 60.179 50.000 12.66 0.00 0.00 4.85
205 206 0.179059 TTCAAGTCTTGGTGCTCGCA 60.179 50.000 12.66 0.00 0.00 5.10
206 207 0.235926 GTTCAAGTCTTGGTGCTCGC 59.764 55.000 12.66 0.00 0.00 5.03
207 208 0.508641 CGTTCAAGTCTTGGTGCTCG 59.491 55.000 12.66 6.97 0.00 5.03
208 209 0.235926 GCGTTCAAGTCTTGGTGCTC 59.764 55.000 12.66 0.00 0.00 4.26
209 210 0.179045 AGCGTTCAAGTCTTGGTGCT 60.179 50.000 12.66 14.90 0.00 4.40
210 211 0.040958 CAGCGTTCAAGTCTTGGTGC 60.041 55.000 12.66 13.09 0.00 5.01
211 212 0.588252 CCAGCGTTCAAGTCTTGGTG 59.412 55.000 12.66 3.15 0.00 4.17
212 213 1.166531 GCCAGCGTTCAAGTCTTGGT 61.167 55.000 12.66 0.00 0.00 3.67
213 214 1.576421 GCCAGCGTTCAAGTCTTGG 59.424 57.895 12.66 0.00 0.00 3.61
214 215 1.205064 CGCCAGCGTTCAAGTCTTG 59.795 57.895 6.21 6.21 34.35 3.02
215 216 1.961277 CCGCCAGCGTTCAAGTCTT 60.961 57.895 11.55 0.00 37.81 3.01
216 217 2.357517 CCGCCAGCGTTCAAGTCT 60.358 61.111 11.55 0.00 37.81 3.24
217 218 3.423154 CCCGCCAGCGTTCAAGTC 61.423 66.667 11.55 0.00 37.81 3.01
219 220 3.950794 TAGCCCGCCAGCGTTCAAG 62.951 63.158 11.55 0.00 38.01 3.02
220 221 3.950794 CTAGCCCGCCAGCGTTCAA 62.951 63.158 11.55 0.00 38.01 2.69
221 222 4.451150 CTAGCCCGCCAGCGTTCA 62.451 66.667 11.55 0.00 38.01 3.18
225 226 2.867855 TATTCCTAGCCCGCCAGCG 61.868 63.158 4.75 4.75 38.01 5.18
226 227 1.301795 GTATTCCTAGCCCGCCAGC 60.302 63.158 0.00 0.00 0.00 4.85
227 228 1.371558 GGTATTCCTAGCCCGCCAG 59.628 63.158 0.00 0.00 0.00 4.85
228 229 1.383386 TGGTATTCCTAGCCCGCCA 60.383 57.895 0.00 0.00 34.23 5.69
229 230 1.070957 GTGGTATTCCTAGCCCGCC 59.929 63.158 0.00 0.00 34.23 6.13
230 231 0.249911 CAGTGGTATTCCTAGCCCGC 60.250 60.000 0.00 0.00 34.23 6.13
231 232 1.068741 GACAGTGGTATTCCTAGCCCG 59.931 57.143 0.00 0.00 34.23 6.13
232 233 1.416772 GGACAGTGGTATTCCTAGCCC 59.583 57.143 0.00 0.00 34.23 5.19
233 234 2.116238 TGGACAGTGGTATTCCTAGCC 58.884 52.381 0.00 0.00 34.23 3.93
234 235 3.643792 AGATGGACAGTGGTATTCCTAGC 59.356 47.826 0.00 0.00 34.23 3.42
235 236 6.551601 AGTTAGATGGACAGTGGTATTCCTAG 59.448 42.308 0.00 0.00 34.23 3.02
236 237 6.441222 AGTTAGATGGACAGTGGTATTCCTA 58.559 40.000 0.00 0.00 34.23 2.94
237 238 5.281314 AGTTAGATGGACAGTGGTATTCCT 58.719 41.667 0.00 0.00 34.23 3.36
238 239 5.615925 AGTTAGATGGACAGTGGTATTCC 57.384 43.478 0.00 0.00 0.00 3.01
239 240 7.015292 TGGATAGTTAGATGGACAGTGGTATTC 59.985 40.741 0.00 0.00 0.00 1.75
240 241 6.844388 TGGATAGTTAGATGGACAGTGGTATT 59.156 38.462 0.00 0.00 0.00 1.89
241 242 6.382087 TGGATAGTTAGATGGACAGTGGTAT 58.618 40.000 0.00 0.00 0.00 2.73
242 243 5.773091 TGGATAGTTAGATGGACAGTGGTA 58.227 41.667 0.00 0.00 0.00 3.25
243 244 4.620723 TGGATAGTTAGATGGACAGTGGT 58.379 43.478 0.00 0.00 0.00 4.16
244 245 5.360591 GTTGGATAGTTAGATGGACAGTGG 58.639 45.833 0.00 0.00 0.00 4.00
245 246 5.104941 TGGTTGGATAGTTAGATGGACAGTG 60.105 44.000 0.00 0.00 0.00 3.66
246 247 5.030147 TGGTTGGATAGTTAGATGGACAGT 58.970 41.667 0.00 0.00 0.00 3.55
247 248 5.104941 TGTGGTTGGATAGTTAGATGGACAG 60.105 44.000 0.00 0.00 0.00 3.51
248 249 4.780554 TGTGGTTGGATAGTTAGATGGACA 59.219 41.667 0.00 0.00 0.00 4.02
249 250 5.353394 TGTGGTTGGATAGTTAGATGGAC 57.647 43.478 0.00 0.00 0.00 4.02
250 251 4.408921 CCTGTGGTTGGATAGTTAGATGGA 59.591 45.833 0.00 0.00 0.00 3.41
251 252 4.164221 ACCTGTGGTTGGATAGTTAGATGG 59.836 45.833 0.00 0.00 27.29 3.51
252 253 5.359194 ACCTGTGGTTGGATAGTTAGATG 57.641 43.478 0.00 0.00 27.29 2.90
268 269 4.368808 CGCGCGAACCAACCTGTG 62.369 66.667 28.94 0.00 0.00 3.66
269 270 3.876589 ATCGCGCGAACCAACCTGT 62.877 57.895 38.07 14.42 0.00 4.00
270 271 3.118454 ATCGCGCGAACCAACCTG 61.118 61.111 38.07 0.00 0.00 4.00
271 272 3.118454 CATCGCGCGAACCAACCT 61.118 61.111 38.07 16.14 0.00 3.50
272 273 1.977594 ATTCATCGCGCGAACCAACC 61.978 55.000 38.07 0.00 0.00 3.77
273 274 0.179200 AATTCATCGCGCGAACCAAC 60.179 50.000 38.07 0.00 0.00 3.77
274 275 0.096281 GAATTCATCGCGCGAACCAA 59.904 50.000 38.07 27.25 0.00 3.67
275 276 0.739462 AGAATTCATCGCGCGAACCA 60.739 50.000 38.07 22.81 0.00 3.67
276 277 0.373716 AAGAATTCATCGCGCGAACC 59.626 50.000 38.07 20.23 0.00 3.62
277 278 2.159467 AAAGAATTCATCGCGCGAAC 57.841 45.000 38.07 21.47 0.00 3.95
278 279 2.892373 AAAAGAATTCATCGCGCGAA 57.108 40.000 38.07 21.85 0.00 4.70
279 280 2.095969 ACAAAAAGAATTCATCGCGCGA 60.096 40.909 36.65 36.65 0.00 5.87
280 281 2.241722 ACAAAAAGAATTCATCGCGCG 58.758 42.857 26.76 26.76 0.00 6.86
281 282 5.932021 ATTACAAAAAGAATTCATCGCGC 57.068 34.783 8.44 0.00 0.00 6.86
310 311 9.030452 TGCCTAATATTTACAAAACTGTCCATT 57.970 29.630 0.00 0.00 0.00 3.16
311 312 8.588290 TGCCTAATATTTACAAAACTGTCCAT 57.412 30.769 0.00 0.00 0.00 3.41
312 313 8.410673 TTGCCTAATATTTACAAAACTGTCCA 57.589 30.769 0.00 0.00 0.00 4.02
313 314 9.135843 GTTTGCCTAATATTTACAAAACTGTCC 57.864 33.333 10.14 0.00 32.51 4.02
314 315 9.685828 TGTTTGCCTAATATTTACAAAACTGTC 57.314 29.630 10.14 2.33 32.51 3.51
329 330 7.660208 CGGGTACTAGAATAATGTTTGCCTAAT 59.340 37.037 0.00 0.00 0.00 1.73
330 331 6.987992 CGGGTACTAGAATAATGTTTGCCTAA 59.012 38.462 0.00 0.00 0.00 2.69
331 332 6.324512 TCGGGTACTAGAATAATGTTTGCCTA 59.675 38.462 0.00 0.00 0.00 3.93
332 333 5.129815 TCGGGTACTAGAATAATGTTTGCCT 59.870 40.000 0.00 0.00 0.00 4.75
333 334 5.235831 GTCGGGTACTAGAATAATGTTTGCC 59.764 44.000 0.00 0.00 0.00 4.52
334 335 5.051240 CGTCGGGTACTAGAATAATGTTTGC 60.051 44.000 0.00 0.00 0.00 3.68
335 336 6.267817 TCGTCGGGTACTAGAATAATGTTTG 58.732 40.000 0.00 0.00 0.00 2.93
336 337 6.455360 TCGTCGGGTACTAGAATAATGTTT 57.545 37.500 0.00 0.00 0.00 2.83
337 338 6.127647 TGTTCGTCGGGTACTAGAATAATGTT 60.128 38.462 0.00 0.00 0.00 2.71
338 339 5.357878 TGTTCGTCGGGTACTAGAATAATGT 59.642 40.000 0.00 0.00 0.00 2.71
339 340 5.824429 TGTTCGTCGGGTACTAGAATAATG 58.176 41.667 0.00 0.00 0.00 1.90
340 341 6.455360 TTGTTCGTCGGGTACTAGAATAAT 57.545 37.500 0.00 0.00 0.00 1.28
341 342 5.895636 TTGTTCGTCGGGTACTAGAATAA 57.104 39.130 0.00 0.00 0.00 1.40
342 343 6.455360 AATTGTTCGTCGGGTACTAGAATA 57.545 37.500 0.00 0.00 0.00 1.75
343 344 4.996788 ATTGTTCGTCGGGTACTAGAAT 57.003 40.909 0.00 0.00 0.00 2.40
344 345 4.789012 AATTGTTCGTCGGGTACTAGAA 57.211 40.909 0.00 0.00 0.00 2.10
345 346 4.789012 AAATTGTTCGTCGGGTACTAGA 57.211 40.909 0.00 0.00 0.00 2.43
346 347 4.030977 CGAAAATTGTTCGTCGGGTACTAG 59.969 45.833 0.63 0.00 37.18 2.57
347 348 3.919804 CGAAAATTGTTCGTCGGGTACTA 59.080 43.478 0.63 0.00 37.18 1.82
348 349 2.733026 CGAAAATTGTTCGTCGGGTACT 59.267 45.455 0.63 0.00 37.18 2.73
349 350 2.730928 TCGAAAATTGTTCGTCGGGTAC 59.269 45.455 8.74 0.00 42.09 3.34
350 351 3.023946 TCGAAAATTGTTCGTCGGGTA 57.976 42.857 8.74 0.00 42.09 3.69
351 352 1.868469 TCGAAAATTGTTCGTCGGGT 58.132 45.000 8.74 0.00 42.09 5.28
352 353 2.477375 TCTTCGAAAATTGTTCGTCGGG 59.523 45.455 8.74 0.00 42.09 5.14
353 354 3.466836 GTCTTCGAAAATTGTTCGTCGG 58.533 45.455 8.74 1.72 42.09 4.79
354 355 3.135909 CGTCTTCGAAAATTGTTCGTCG 58.864 45.455 8.74 6.56 42.09 5.12
355 356 3.892552 CACGTCTTCGAAAATTGTTCGTC 59.107 43.478 8.74 0.00 42.09 4.20
356 357 3.302870 CCACGTCTTCGAAAATTGTTCGT 60.303 43.478 8.74 1.55 42.09 3.85
357 358 3.215244 CCACGTCTTCGAAAATTGTTCG 58.785 45.455 2.43 2.43 42.74 3.95
358 359 3.966218 CACCACGTCTTCGAAAATTGTTC 59.034 43.478 0.00 0.00 40.62 3.18
359 360 3.623960 TCACCACGTCTTCGAAAATTGTT 59.376 39.130 0.00 0.00 40.62 2.83
360 361 3.199677 TCACCACGTCTTCGAAAATTGT 58.800 40.909 0.00 0.00 40.62 2.71
361 362 3.870723 TCACCACGTCTTCGAAAATTG 57.129 42.857 0.00 0.00 40.62 2.32
362 363 3.623960 TGTTCACCACGTCTTCGAAAATT 59.376 39.130 0.00 0.00 40.62 1.82
363 364 3.001939 GTGTTCACCACGTCTTCGAAAAT 59.998 43.478 0.00 0.00 40.62 1.82
364 365 2.349275 GTGTTCACCACGTCTTCGAAAA 59.651 45.455 0.00 0.00 40.62 2.29
365 366 1.928503 GTGTTCACCACGTCTTCGAAA 59.071 47.619 0.00 0.00 40.62 3.46
366 367 1.563111 GTGTTCACCACGTCTTCGAA 58.437 50.000 0.00 0.00 40.62 3.71
367 368 3.261441 GTGTTCACCACGTCTTCGA 57.739 52.632 0.00 0.00 40.62 3.71
375 376 4.610945 CAGATTGGAAAAGTGTTCACCAC 58.389 43.478 0.00 0.00 44.89 4.16
376 377 3.068024 GCAGATTGGAAAAGTGTTCACCA 59.932 43.478 0.00 0.00 0.00 4.17
377 378 3.642705 GCAGATTGGAAAAGTGTTCACC 58.357 45.455 0.00 0.00 0.00 4.02
378 379 3.003275 TCGCAGATTGGAAAAGTGTTCAC 59.997 43.478 0.00 0.00 0.00 3.18
379 380 3.210227 TCGCAGATTGGAAAAGTGTTCA 58.790 40.909 0.00 0.00 0.00 3.18
380 381 3.896648 TCGCAGATTGGAAAAGTGTTC 57.103 42.857 0.00 0.00 0.00 3.18
381 382 4.853924 AATCGCAGATTGGAAAAGTGTT 57.146 36.364 3.51 0.00 45.12 3.32
382 383 5.240623 TGTTAATCGCAGATTGGAAAAGTGT 59.759 36.000 12.17 0.00 45.12 3.55
383 384 5.698832 TGTTAATCGCAGATTGGAAAAGTG 58.301 37.500 12.17 0.00 45.12 3.16
384 385 5.957842 TGTTAATCGCAGATTGGAAAAGT 57.042 34.783 12.17 0.00 45.12 2.66
385 386 6.789262 AGATGTTAATCGCAGATTGGAAAAG 58.211 36.000 12.17 0.00 45.12 2.27
386 387 6.757897 AGATGTTAATCGCAGATTGGAAAA 57.242 33.333 12.17 0.00 45.12 2.29
387 388 6.757897 AAGATGTTAATCGCAGATTGGAAA 57.242 33.333 12.17 0.00 45.12 3.13
388 389 6.757897 AAAGATGTTAATCGCAGATTGGAA 57.242 33.333 12.17 0.24 45.12 3.53
389 390 6.183360 GGAAAAGATGTTAATCGCAGATTGGA 60.183 38.462 12.17 1.48 45.12 3.53
390 391 5.973565 GGAAAAGATGTTAATCGCAGATTGG 59.026 40.000 12.17 0.00 45.12 3.16
391 392 6.789262 AGGAAAAGATGTTAATCGCAGATTG 58.211 36.000 12.17 0.00 45.12 2.67
392 393 8.506168 TTAGGAAAAGATGTTAATCGCAGATT 57.494 30.769 8.46 8.46 45.12 2.40
393 394 8.682936 ATTAGGAAAAGATGTTAATCGCAGAT 57.317 30.769 0.00 0.00 45.12 2.90
394 395 9.042008 GTATTAGGAAAAGATGTTAATCGCAGA 57.958 33.333 0.00 0.00 45.75 4.26
395 396 8.283291 GGTATTAGGAAAAGATGTTAATCGCAG 58.717 37.037 0.00 0.00 37.92 5.18
396 397 7.227910 GGGTATTAGGAAAAGATGTTAATCGCA 59.772 37.037 0.00 0.00 37.92 5.10
397 398 7.570691 CGGGTATTAGGAAAAGATGTTAATCGC 60.571 40.741 0.00 0.00 37.92 4.58
398 399 7.654520 TCGGGTATTAGGAAAAGATGTTAATCG 59.345 37.037 0.00 0.00 37.92 3.34
399 400 8.771766 GTCGGGTATTAGGAAAAGATGTTAATC 58.228 37.037 0.00 0.00 0.00 1.75
400 401 8.269317 TGTCGGGTATTAGGAAAAGATGTTAAT 58.731 33.333 0.00 0.00 0.00 1.40
401 402 7.622713 TGTCGGGTATTAGGAAAAGATGTTAA 58.377 34.615 0.00 0.00 0.00 2.01
402 403 7.185318 TGTCGGGTATTAGGAAAAGATGTTA 57.815 36.000 0.00 0.00 0.00 2.41
403 404 6.057321 TGTCGGGTATTAGGAAAAGATGTT 57.943 37.500 0.00 0.00 0.00 2.71
404 405 5.687166 TGTCGGGTATTAGGAAAAGATGT 57.313 39.130 0.00 0.00 0.00 3.06
405 406 7.568199 AATTGTCGGGTATTAGGAAAAGATG 57.432 36.000 0.00 0.00 0.00 2.90
406 407 8.589701 AAAATTGTCGGGTATTAGGAAAAGAT 57.410 30.769 0.00 0.00 0.00 2.40
407 408 8.411991 AAAAATTGTCGGGTATTAGGAAAAGA 57.588 30.769 0.00 0.00 0.00 2.52
431 432 8.522178 AAAAATATCACGGCGTATTTGAAAAA 57.478 26.923 14.22 0.00 32.47 1.94
432 433 7.808381 TGAAAAATATCACGGCGTATTTGAAAA 59.192 29.630 14.22 0.00 32.47 2.29
433 434 7.306213 TGAAAAATATCACGGCGTATTTGAAA 58.694 30.769 14.22 2.23 32.47 2.69
434 435 6.843208 TGAAAAATATCACGGCGTATTTGAA 58.157 32.000 14.22 2.57 32.47 2.69
435 436 6.424176 TGAAAAATATCACGGCGTATTTGA 57.576 33.333 14.22 6.25 32.47 2.69
436 437 7.499438 TTTGAAAAATATCACGGCGTATTTG 57.501 32.000 14.22 0.00 32.47 2.32
437 438 9.228636 GTATTTGAAAAATATCACGGCGTATTT 57.771 29.630 14.22 12.94 33.24 1.40
438 439 8.399425 TGTATTTGAAAAATATCACGGCGTATT 58.601 29.630 14.22 6.44 0.00 1.89
439 440 7.921787 TGTATTTGAAAAATATCACGGCGTAT 58.078 30.769 14.22 9.62 0.00 3.06
440 441 7.304919 TGTATTTGAAAAATATCACGGCGTA 57.695 32.000 14.22 0.00 0.00 4.42
441 442 6.184580 TGTATTTGAAAAATATCACGGCGT 57.815 33.333 6.77 6.77 0.00 5.68
442 443 6.909895 TGATGTATTTGAAAAATATCACGGCG 59.090 34.615 4.80 4.80 0.00 6.46
443 444 8.693504 CATGATGTATTTGAAAAATATCACGGC 58.306 33.333 0.00 0.00 0.00 5.68
444 445 9.949174 TCATGATGTATTTGAAAAATATCACGG 57.051 29.630 0.00 2.06 0.00 4.94
454 455 9.993454 TGAAAAATGGTCATGATGTATTTGAAA 57.007 25.926 0.00 0.00 0.00 2.69
455 456 9.993454 TTGAAAAATGGTCATGATGTATTTGAA 57.007 25.926 0.00 0.00 0.00 2.69
456 457 9.993454 TTTGAAAAATGGTCATGATGTATTTGA 57.007 25.926 0.00 0.00 0.00 2.69
461 462 9.585099 GCTTATTTGAAAAATGGTCATGATGTA 57.415 29.630 0.00 0.00 0.00 2.29
462 463 7.276218 CGCTTATTTGAAAAATGGTCATGATGT 59.724 33.333 0.00 0.00 0.00 3.06
463 464 7.488792 TCGCTTATTTGAAAAATGGTCATGATG 59.511 33.333 0.00 0.00 0.00 3.07
464 465 7.546358 TCGCTTATTTGAAAAATGGTCATGAT 58.454 30.769 0.00 0.00 0.00 2.45
465 466 6.918626 TCGCTTATTTGAAAAATGGTCATGA 58.081 32.000 0.00 0.00 0.00 3.07
466 467 7.276218 ACATCGCTTATTTGAAAAATGGTCATG 59.724 33.333 0.00 0.00 0.00 3.07
467 468 7.322664 ACATCGCTTATTTGAAAAATGGTCAT 58.677 30.769 0.00 0.00 0.00 3.06
470 471 7.598278 TGTACATCGCTTATTTGAAAAATGGT 58.402 30.769 0.00 0.00 0.00 3.55
507 508 7.351981 CAGTCTTGAAAAATGTTCATCACGTA 58.648 34.615 0.00 0.00 0.00 3.57
820 823 2.563471 AGAACGTAGAAGGCGATGAC 57.437 50.000 0.00 0.00 0.00 3.06
832 835 5.599732 CTCACCTAGAGCTAGTAGAACGTA 58.400 45.833 0.00 0.00 37.59 3.57
874 877 1.557371 GGAGTTTGAGGAGAAGGAGGG 59.443 57.143 0.00 0.00 0.00 4.30
881 884 6.608405 TGGTATTTATACGGAGTTTGAGGAGA 59.392 38.462 0.00 0.00 37.78 3.71
887 890 5.276678 CGCTGTGGTATTTATACGGAGTTTG 60.277 44.000 0.00 0.00 37.78 2.93
962 969 5.353123 ACTGTTTTTGTTCTCTCAAACGCTA 59.647 36.000 0.00 0.00 37.10 4.26
975 982 1.399089 CGTCGGTGGACTGTTTTTGTT 59.601 47.619 0.00 0.00 41.16 2.83
980 987 0.318107 CGTACGTCGGTGGACTGTTT 60.318 55.000 7.22 0.00 41.16 2.83
981 988 1.165907 TCGTACGTCGGTGGACTGTT 61.166 55.000 16.05 0.00 41.16 3.16
982 989 0.957395 ATCGTACGTCGGTGGACTGT 60.957 55.000 16.05 0.00 41.16 3.55
983 990 0.522705 CATCGTACGTCGGTGGACTG 60.523 60.000 16.05 0.00 45.69 3.51
984 991 1.798735 CATCGTACGTCGGTGGACT 59.201 57.895 16.05 0.00 45.69 3.85
989 996 4.842091 GCGCCATCGTACGTCGGT 62.842 66.667 16.05 0.00 40.32 4.69
1243 1251 4.785453 GTTGCAGCGGGAGGGGAG 62.785 72.222 0.00 0.00 0.00 4.30
1297 1305 4.239428 TGAAGAAGGAATGATGCATGGA 57.761 40.909 2.46 0.00 0.00 3.41
1328 1342 4.320202 CGCATAAACAAAGCAGTGGTAGTT 60.320 41.667 0.00 1.06 0.00 2.24
1341 1355 5.897050 AGAAAACTTTGGACGCATAAACAA 58.103 33.333 0.00 0.00 0.00 2.83
1351 1366 7.592903 CAGAATCAAGCTTAGAAAACTTTGGAC 59.407 37.037 0.00 0.00 0.00 4.02
1382 1397 3.052036 CCGTTCATGCACAAGGAAAAAG 58.948 45.455 0.00 0.00 0.00 2.27
1390 1405 2.644418 GCTGCCGTTCATGCACAA 59.356 55.556 0.00 0.00 34.46 3.33
1440 1455 6.536582 CCACCTTCATTATTAGTCACTCTGTG 59.463 42.308 0.00 0.00 34.45 3.66
1502 1517 1.287041 ACGAAAACTAAGACGGCGGC 61.287 55.000 13.24 8.92 0.00 6.53
1595 1610 3.007398 AGTGCAGAGGTTAAAGTGAGAGG 59.993 47.826 0.00 0.00 0.00 3.69
1597 1612 4.689612 AAGTGCAGAGGTTAAAGTGAGA 57.310 40.909 0.00 0.00 0.00 3.27
1608 1673 5.350633 TGAATGAAAAACAAAGTGCAGAGG 58.649 37.500 0.00 0.00 0.00 3.69
1612 1677 6.183360 CGAGTTTGAATGAAAAACAAAGTGCA 60.183 34.615 0.00 0.00 39.49 4.57
1620 1685 5.343325 GCTCCATCGAGTTTGAATGAAAAAC 59.657 40.000 0.00 0.00 38.49 2.43
1621 1686 5.241506 AGCTCCATCGAGTTTGAATGAAAAA 59.758 36.000 0.00 0.00 38.49 1.94
1622 1687 4.761739 AGCTCCATCGAGTTTGAATGAAAA 59.238 37.500 0.00 0.00 38.49 2.29
1623 1688 4.154737 CAGCTCCATCGAGTTTGAATGAAA 59.845 41.667 0.00 0.00 38.49 2.69
1643 1708 7.573968 ACTATGATGAAATTTACCTTCCAGC 57.426 36.000 0.00 0.00 0.00 4.85
1654 1719 8.362639 GCCATGTGGATTTACTATGATGAAATT 58.637 33.333 2.55 0.00 37.39 1.82
1655 1720 7.039504 GGCCATGTGGATTTACTATGATGAAAT 60.040 37.037 0.00 0.00 37.39 2.17
1656 1721 6.265196 GGCCATGTGGATTTACTATGATGAAA 59.735 38.462 0.00 0.00 37.39 2.69
1657 1722 5.769662 GGCCATGTGGATTTACTATGATGAA 59.230 40.000 0.00 0.00 37.39 2.57
1658 1723 5.163109 TGGCCATGTGGATTTACTATGATGA 60.163 40.000 0.00 0.00 37.39 2.92
1659 1724 5.048504 GTGGCCATGTGGATTTACTATGATG 60.049 44.000 9.72 0.00 37.39 3.07
1660 1725 5.072741 GTGGCCATGTGGATTTACTATGAT 58.927 41.667 9.72 0.00 37.39 2.45
1661 1726 4.460263 GTGGCCATGTGGATTTACTATGA 58.540 43.478 9.72 0.00 37.39 2.15
1662 1727 3.250762 CGTGGCCATGTGGATTTACTATG 59.749 47.826 17.42 0.00 37.39 2.23
1663 1728 3.118038 ACGTGGCCATGTGGATTTACTAT 60.118 43.478 29.84 0.00 37.39 2.12
1664 1729 2.237643 ACGTGGCCATGTGGATTTACTA 59.762 45.455 29.84 0.00 37.39 1.82
1678 1743 3.998341 TGAGTGTTTATTTCTACGTGGCC 59.002 43.478 0.00 0.00 0.00 5.36
1693 1758 0.037697 TCTACGCGGCATTGAGTGTT 60.038 50.000 12.47 0.00 32.87 3.32
1694 1759 0.037697 TTCTACGCGGCATTGAGTGT 60.038 50.000 12.47 4.62 35.14 3.55
1695 1760 1.075542 TTTCTACGCGGCATTGAGTG 58.924 50.000 12.47 0.00 0.00 3.51
1697 1762 3.740832 TGATATTTCTACGCGGCATTGAG 59.259 43.478 12.47 0.00 0.00 3.02
1698 1763 3.723260 TGATATTTCTACGCGGCATTGA 58.277 40.909 12.47 0.00 0.00 2.57
1700 1765 5.932303 AGTATTGATATTTCTACGCGGCATT 59.068 36.000 12.47 0.00 0.00 3.56
1701 1766 5.479306 AGTATTGATATTTCTACGCGGCAT 58.521 37.500 12.47 0.00 0.00 4.40
1745 1842 7.736447 GCATCAGCAATTTAGGAGTAGTATT 57.264 36.000 0.00 0.00 41.58 1.89
1773 1895 1.672356 AACCTGATGCAGTCGCCAC 60.672 57.895 0.00 0.00 37.32 5.01
1778 1900 0.393537 CCTCCCAACCTGATGCAGTC 60.394 60.000 0.00 0.00 0.00 3.51
1782 1904 2.440980 GCCCTCCCAACCTGATGC 60.441 66.667 0.00 0.00 0.00 3.91
1835 1959 2.849942 TGTGAGATATCCCAATTGGCG 58.150 47.619 19.75 12.36 0.00 5.69
1844 1968 9.482627 CATACTAAGGTTCTTTGTGAGATATCC 57.517 37.037 0.00 0.00 33.49 2.59
1892 2016 8.696043 ATCTAAACTAATGGATTGCATGCTAA 57.304 30.769 20.33 11.86 0.00 3.09
1895 2019 8.352201 TGTTATCTAAACTAATGGATTGCATGC 58.648 33.333 11.82 11.82 0.00 4.06
1918 2042 8.267894 AGGATGTATATACAGTGCTCTTTTGTT 58.732 33.333 19.80 0.00 39.92 2.83
1971 2101 1.463444 GTTCCATTGTGTACTCGGTGC 59.537 52.381 0.00 0.00 0.00 5.01
1976 2106 8.773404 ATGTTAGTAAGTTCCATTGTGTACTC 57.227 34.615 0.00 0.00 0.00 2.59
1983 2113 6.761242 TGATCCGATGTTAGTAAGTTCCATTG 59.239 38.462 0.00 0.00 0.00 2.82
1994 2124 9.226606 TCTTTTGTTTTATGATCCGATGTTAGT 57.773 29.630 0.00 0.00 0.00 2.24
1998 2128 6.884295 TCCTCTTTTGTTTTATGATCCGATGT 59.116 34.615 0.00 0.00 0.00 3.06
2001 2131 9.627123 ATTATCCTCTTTTGTTTTATGATCCGA 57.373 29.630 0.00 0.00 0.00 4.55
2104 2234 3.501019 GGCATCCAACTGGGGATTCATAT 60.501 47.826 0.00 0.00 45.42 1.78
2121 2251 6.716628 TGAAGGATTTAGTAATGGATGGCATC 59.283 38.462 19.23 19.23 0.00 3.91
2192 2322 2.417719 GTTGAGTGATGTGGGTCTCAC 58.582 52.381 0.00 0.00 46.23 3.51
2197 2327 0.756294 TGTCGTTGAGTGATGTGGGT 59.244 50.000 0.00 0.00 0.00 4.51
2257 2387 3.708403 ATCTGTGATTTGCAGGTGAGA 57.292 42.857 0.00 0.00 34.89 3.27
2340 2495 0.461961 ACTCTATGGAAGGAGCACGC 59.538 55.000 0.00 0.00 33.29 5.34
2362 2520 4.837298 TGTGGAATTTGGGATGATGTTTCA 59.163 37.500 0.00 0.00 36.00 2.69
2364 2522 6.127083 GGTATGTGGAATTTGGGATGATGTTT 60.127 38.462 0.00 0.00 0.00 2.83
2365 2523 5.363580 GGTATGTGGAATTTGGGATGATGTT 59.636 40.000 0.00 0.00 0.00 2.71
2368 2526 5.141455 TGGTATGTGGAATTTGGGATGAT 57.859 39.130 0.00 0.00 0.00 2.45
2374 2532 5.605534 TGTTGTTTGGTATGTGGAATTTGG 58.394 37.500 0.00 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.