>input_sequence_80962
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----------------------------------------------ATGGCGCCGAGCACCTTCCCGCGCGCGCTCCTGG
CCGTGTCCCTCGTTCTCCTGGTGGTCGGCGGCCTCGGGCCGGCGGCGGAGGCACAGCCGCCGGGGA-GGTGCGTGCCGCA
GCTGAACCGGCTGCTGGCGTGCCGCGCGTACCTGGTGCCCGGCGCGGCCGACCCCAGCGCCGACTGCTGCAGCGCGCTGA
GCTCCATCTCGCGCGACTGCGCGTGCAGCACCATGGGCATCATCAACAGCCTCCCCTCCCGCTGCAACATCGGACAAGTC
AACTGCTGTAAGCCAACACAACCCT------CCATGCATCATTCCTTCTTCAAAATAAAATAACTACCACTGCTTT-GTT
TATGCGTCCAAAGTTTTCTAAGCTTGATTCTGTCTCCTTTTTCCTTGTGCATGAACGGCAGCGGCTTGA-----------
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>chr7A_1_TraesCS7A01G269700
GTTACCAAGAAATGAAAGTACCTGATAATATAATTTAGTTGGCGTGCGCGAGCTTTAATAATTGGTCCAATATATGTATC
AGCAGGGATTGTGGGTGTAATTGTAGTAGTGATGTCCCCATCACATACACTCATCTCTATGAACGCACACACACGCATCC
TATCCCTATGAGCACATCCGAGAGCTTGAGGCGGCATGTCATCTTTGCGAGCACCAAGACTTGAACGCTGGCGGGCTAGG
AATACCACTGTCCATCTAACTATCCAACCACAGGTTGGTTCGCGCGATGAATTCTTTTTGTAATATATGTAATGGACAGT
TTTGTAAATATTAGGCAAACATTATTCTAGTACCCGACGAACAATTTTCGAAGACGTGGTGAACACTTTTCCAATCTGCG
ATTAACATCTTTTCCTAATACCCGACAATTTTTTTTCAAATACGCCGTGATATTTTTCAAATACATCATGACCATTTTTC
AAATAAGCGATGTACATTTTTTTTTACTACGTGATGAACATTTTTCAAGACTGCAACTACAACTTCTTCTAAGTGGGCAT
ATTTCGCAAATAAAAAAAA-CTTCTTCCAGATACTCCGCTGGCAAGAGATGCCGGCACCGGCATTGCCTGGCAGCCGCGC
ACAGACACAGATCGAGCAGGCCGTGCGTCGCAAGCTCCTCTCCTAGGACAAGCCGGCACCGGAAAAGAAGCGAAGATCTC
AAGAGCGTGATGCGCCCAGGCGCGTGACGCTCGTTCGGTAGCTCACACAAAACCTGCAGC-TGCTCGAACGGCTGCTCCA
CCGCTCGCTCCGTGCACGGTGCGTCATCGCCTTCTACGTTCTACTAGCTCTAGGTGAGCCATGCAAAGCTCGCCGCCCCT
CCTTCTCCTC---AAACTCCGTATAAATACCACAGCGCGTCGTCGTGCACTGCAACAGCCAGCCAGCACAAGCTCAACGA
GCC-ACGCTAGCGTTTGAGAGAACAAAAACAGTCCACCGACGTACGATGGCGCCGAGCACCTTCCCGCGCGCGCTCCTGG
CCGTGTCCCTCGTTCTCCTGGTGGTCGGCGGCCTCGGGCCGGCGGCGGAGGCACAGCCGCCGGGGA-GGTGCGTGCCGCA
GCTGAACCGGCTGCTGGCGTGCCGCGCGTACCTGGTGCCCGGCGCGGCCGACCCCAGCGCCGACTGCTGCAGCGCGCTGA
GCTCCATCTCGCGCGACTGCGCGTGCAGCACCATGGGCATCATCAACAGCCTCCCCTCCCGCTGCAACATCGGACAAGTC
AACTGCTGTAAGCCAACACAACCCT------CCATGCATCATTCCTTCTTCAAAATAAAATAACTACCACTGCTTT-GTT
TATGCGTCCAAAGTTTTCTAAGCTTGATTCTGTCTCCTTTTTCCTTGTGCATGAACGGCAGCGGCTTGAGGCGGAACGAA
GAAACGATGCGAGTCACAGAGTGACTAATAATGAAGGTGGTCATTTCTGCCGTTGTTGCGGCATGTCTGCCTCTTCGCCG
CCGTCTTAGTTTTCGTTTGTCCAGTCTGTCGTGTCCTGCTGCTGCTGTCGATCTCGACACGTTAATAAAATGGACGATTT
GAGGCACGGCCTC--------------------------------------------------TCACTTTAACCTCTGCA
CTTTGTTTTTCATTCAAACTCGATGGAGCTGGAAGGTAAATTTCATCATAGTAAATCCACATGGCCACGTAGAAATAAAC
ACTCAA--------------------------TGCCGCGTAGAAAT----ATCAATACTACTGAATTCGGT--AAAAGAA
AAATACTACTC-------------------------CTAAATTGCTGATGCAAGGTGGCGACTGCATCAGGTTGGGAGGG
-CAGGTCACCGAGGTGACCATGAGTCC-ATAATATGAACGCCAATTGGGATATCTCACAAAGAACCTTAGTATGATGTCT
GCAAACTCAAAAAACTTAGCATGCAATCCATTAGTTTAGATAACAAAAGAGC-----ACTGTATATACATCCTGACTGCA
TGCCTAAAGTGGGATT-GCGGCACCGAGTACACAATGGAACTTACTAACATCGGATCATAAAACAAAAGAGGATAATGAG
ACCTTCCTCGACGCGGAGGTTCACGAGAAACCTTGCTAACTTTTCATCAACATATGACAGATAGAAGTAAAAAATATGAA
TCCCCAGTTGGATGCCATCCATTACTAAATCCTTCACACTATCCTGAAATTTGTTCTAGAAACAAGGCCTCCTGTTTGCT
GGTGAGACCCACATCACTCAACGACATCTGACACTCCTCGTCGGTGAATGCACGCCTGGGGTAAGATCTCACCTGCAAAT
CACAGATTTGCATTAGTATT------------GATATAATAATCAGAATACTATATCAGT-------------ATAAAAC
AAGAAGATATTCTGGCGTGCTC---CTTCCATAGAGTTTTGAAACATCATCCCAAATTCCACATACCAAACAACAGAAGT
GAATGATTAGCT
>chr7D_469
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--------------------------------------------------------------------TGGCCATTTTTT
AAACAAGCGATGAACATT-TTTTTTACCACGTGATGAACATTTTTCAAGACTGCAACTACAACTTCTTCTAAGTGGGCAT
ATTTCGCAAATAAAAAAAAACTTCTTCCAGATACTCCGCTAGCAAGAGATGCCGGCACCGGCATTGCGTGGCAGCCGCGC
ACAGACACAGATCGAGCAGGCCGTGCGTCGCAAGCTCCTCTCCTAGGACAAGCCGGCACCGGAAAAGAAGCGAAGATCTC
AAGAGCGTGATGCGCCCAGGCGCGTGACGCTCGTTCGGTAGCTCACACAAAACCTGCAGC-TGCTCGAACGGCTGCTCCA
CCGCTCGCTCCGTGCACGGTGCATCATCGCCTTCCAAGTTCTACTAGCTCTTGGTGAGCCATGCAAAGCTCGCCGCGCCT
CCTCCTCCTTCGAAAACTCCGTATAAATACCATAGCGCGTCGTCGTGCAATGCAACAGCCAGCCAGCACAAGCTCAAGAA
GCCTACTCCAGCGTTTGAGAGGACAACGGTCGACCGACGACGCACGATGGCGCCGAGCACCGTCCCGCGCGCGCTCCTGG
CCGTGTCCCTCGTTCTCCTGGTGGTCGGCGGCCTCGGGCCGGCGGCGGAGGCGCAGCGGCCGGGGGGGGTGCGTGCCGCA
GCTGAACCGGCTGCTGGCGTGCCGCGCGTACCTGGTGCCCGGCGCCGCCGACCCCAGCGCCGACTGCTGCAGCGCGCTGA
GCTCCATCTCGCGCGACTGCGCGTGCAGCACCATGGGCATCATCAACAGCATCCCCTCCCGCTGCAACATTGGACAAGTC
AACTGCTGTAAGCC--CACAACCCG------CCATGCATCATTCCTTCTTCAAAATAAAATCACTACTACTGCT-T-GTT
CATGCTTCCAAAGTTTTCTAAGCTTGATTCTGTCTCTTTTTCCCCTGTGCATGAACGGCAGCGGCTTGAGTCGGAACGAA
GAAACGATCCAGGTTACAGAGTGACTAATAATGAAGGTGGTGATTTCTGCCGTTGTTGCGGCATGTCTGCCTCTTCACCG
CCGTATTAATTTTCGTTTGTCCAGTCTGTCGTGTCCTGCTGTTGCTGCCGATCTCGACACGTTAATAAAATGGACGATTT
GACGCACGGTCGCTACCGATTTCCTTCCTTGTACGCACCTTCCAGCACTATGTACGTGCGATTTCACTTTAAGCTCGGCA
CTTTTC--TTCATTCAAACTCGATGGAATTGGAAG----------------TAAATCCACATAGC-ACGTAGAAATATCA
ATACTCAAATTACTGATGCAGTAAATCCAGGTTGCCGTGTAGAAATATCAATTAATACTACTGAATTCAGT--AAAAAAA
ATACAATCCATAATATGTTACTGATGACCATAAGTACTAAATTGCTGATGCAAGCTTGCCACTACATCAGGTTGGGAGGG
CCAGGTCACCGAGGTGACCATGAGTCC-ATAATATGAAGGCCAATTGAGATATCTCACAAAGAACCTTAACATGAAGTCC
GCAAACTCGAAAGACATACCATGCAATCCATTAGCTTAGATCACAAAAGAGCG-----CTGTATATACATCCTGACTGCA
TGCCTAAAGTGGGATTTGCAACACCAAGTACATAATGGAACTTGCTATCACCGGATCATAAAACAAAAGAGGATAATGCG
ACATTTCTCGACGCGGAGGTTCACGATAAACCTTGCTAACTTTCCATCAACATATGACAGATAGAAGTAAAAAGTATGAA
TCCCCAGTTGAATGCCGTCCATTACTAAATCCTTCACACTATCCTGAAATTTGTTCTAGAAACAAGGCCTCCTGTTTGCT
GCTGAGGCCCACATCACTCAACGACATCTGACACTCCTCGTCGGTGAATGCACGCCTGGGGTAAGACCTCACCTGCACAT
CATAGATTTGCATTAGTATGGAACATCTCATCGATATAATAACAAGAATGCTATATCAGTAATCGCATAGAACATAAAAC
AAGAAGATATTCTGACGTGCTCGGTCTTCCATAGAGTTTAGCTACGTCATCACAAATTCCACATACCAAACAACAGCAGT
AAATGATTAGCT
>chr7B_566
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-----GCAAATAAAAAAAACCTTCTTCTAGGTACTCTGCTACCGAGAGATGCCGGGACCGGCATTGCCTGGCAGCCGCGC
ACAGACACAGATCGAGCAGGCCATGCGTCGCAAGCTCCTCTCCTAGGACAAGCCCG--CCGGAAAAGAAGTGAAGATCTC
AAGAGCGTGATGCGCCCAGGCGCGTGACGTTCGTTCGGTAGCTCACACAAAACCTGCTCCGTGCACGAACGGCTGCTCCA
CCGCTCGCTCCGTGCACGGTGCATCATCGCCTTCCAAGTTCTG---GCTCTAGGTGAGCCATGCAAAGCTCGCCGCGCCT
CCTC------CGAAAACTCCGTATAAATACCATAGCGCGTCGCCGTGCACTGCAACAGCCAGCCAGCACAAGCTCAAGGA
GCCCACGCCAGCGTTTGAGAGGACAACGGTCGACCGACGACGTACGATGGCGCCGAGCACCGTCCCGCGCGCACTCCTGG
CCGTGTCCCTCGTTCTCCTGGTGGTCGGCGGCCTCGGGCCGGCGGCGGAGGCGCAGCCGCCGGGGG-GGTGCGTGCCGCA
GCTGAACCGGCTGCTGGCGTGCCGCGCGTACCTGGTGCCCGGCGCCGCCGACCCCAGCGCCGACTGCTGCAGCGCGCTGA
GCTCCATCTCGCGCGACTGCGCGTGCAGCACCATGGGCATCATCAACAGCATCCCCTCCCGCTGCAACATCGGACGAGTC
AACTGCTGTAAGCCAACAACCCCCCATGGCCCCATGCATCATTCCTTCTTCAAAATAAAATTACTACCACTGCT-TTGTT
TATGCCTCCGAAGTTTTCTAAGCTTGATTCTGTCTCTTTTTTCCCTGTGCATGAACGGCAGCGGCTTGAGGCGGAACGAA
GAAACGATGCAAGT--CAGAGTGACTAATAATGAAGGTTGTCA-TTCTGCCGTTGTTGCGGC-----TGCCTCTTCATCG
CCGTCGTAGTTTTCGTTTGTCCAGTCTGTCATGTCCTGCTGCTGCTGTCGATCTCGACGCGTTAATAAAATGGACGATTT
GACGCACGGTCACTACCGATTTCCTTCCTTTTATGCACCTTCGAGCACTACGTACATGCGATTTCACTTTAAGCTCGGCA
CTTTTC--TTCATTCAAACTCGATGGA----------------------AGTAAATCCACATAGCCACGTGGAAATATCA
ATACTCAAATTACTGATGCAGTAAATCCAGGTTGCCGTGTAGAAATATCAATCAATACTACTGAATTCAGTAAAAAAAAA
CTACAATCCATAATATGTTACTGATGACCATAAGTACTAAATTACTGATGCAAGCTGGCCACTACATCAGGTTGGGAGGG
CCAGGTCACCGAGGTGACCATGAGTCCAATAATATGAAGGCCAATTGAGATATCTCACAAAGAACACTAACATGATGTCT
GCGAACTCGAAAAACATACCATGCAATCCATTAGCTTAGATCACAAAAGAGCACTGTACTGTATATACATCCTGACTGCA
TGCCTAAAGTGGGATTTGCGACACCAAGTACATAACGGAACTTGCTATCACCGGATCATAAAAGAAAAGAGGATAATGAG
ACCTTTCTAGACGCGGAGGTTCACGAGAAACCTTGCTAACTTTTCATTAACATATGACAGATAGAAGTAAAAAGTATGAA
TCCCCAGTTGAATGTCATCCATTACTAAATCCTTCACACTATCCTGAAATTTGTTCCAGAAACAAGGCCTCCTGTTTGCT
GCTGAGGCCCACATCACTCAACGACATCTGACACTCCTCGTCGGTGAATGCACGCCTGGGGTAAGACCTCACCTGCACAT
CATAGATTTGCATTAGTATTGAACATCTCATCGATATAATAACAAGAATACTATATCAGTAATCGCATAGAACATAAAAC
AAGAAGATATTCTGACGTGCTCGGTCTTCCATAGAATTTAGCTACGTCATCACAAATTCCACATACCAAACAACAGCAGT
AAATGATTAGCT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--------S
---S--------S-----S--------S----------------------------------------------------
----------------------------------------S---------------------------------------
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----------------------S-----------S-S---------------------------------------S---
---S-----S----------------------S--------------------------------------------S--
--------S------------S----SSSSS-S--SS------------------------S------------------
----------------------------------------------------S------------S--------------
---------------------------------------------S----------------------------------
--------------------------------------------------S-----------------------------
------------------------S------------------------------------S------------S-----
-----S------------------------------S-------S-----------------------------------
----------S---S-------------------------------------------------------------S---
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--S------S-S------------------------------------------------------------S---S---
----SSSS-------------------SS------SSSSSSSSSSSSSS-------------S--------------SSS
-SS-SS-------------------------------S------------------------------S--------S--
-S-S-S-S-SS-------------------------------------------S----S---S----------------
--------------------------------------S--------S---------------------SS---------
--------S------S--S---------------S------S--------------------------------------
--------------------S----S------S----------S---S--S-----------------------------
-----S-------------------------------------------------------------------S------
----------S---------------------------------------------------------------------
-S----S-----------------------------------------------------------S----------S--
--S---------------------------------------SS------------------------------------
--------------S------------------------S-SS--S-----S------------------------S---
S-----------
>forward_211
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-------------------------------CGGCATGTCATCTTTGCGAG-----------------------------
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>reverse_1758
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-----------------------------------------------------------------------------AAC
ACTCAATGCCGCGTAGA---------------------------------------------------------------
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