Multiple sequence alignment - TraesCS7A01G255300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G255300 chr7A 100.000 3178 0 0 1 3178 243219960 243216783 0.000000e+00 5869.0
1 TraesCS7A01G255300 chr7A 93.333 45 3 0 2864 2908 496093243 496093199 2.050000e-07 67.6
2 TraesCS7A01G255300 chr7B 93.633 1869 78 14 750 2595 201264703 201262853 0.000000e+00 2754.0
3 TraesCS7A01G255300 chr7B 92.857 182 9 2 530 707 201264887 201264706 8.740000e-66 261.0
4 TraesCS7A01G255300 chr6A 94.972 537 25 2 1 536 475904801 475904266 0.000000e+00 841.0
5 TraesCS7A01G255300 chr2B 91.806 537 43 1 1 536 171006057 171006593 0.000000e+00 747.0
6 TraesCS7A01G255300 chr2D 90.503 537 50 1 1 536 55298150 55297614 0.000000e+00 708.0
7 TraesCS7A01G255300 chr2D 90.503 537 50 1 1 536 55312648 55312112 0.000000e+00 708.0
8 TraesCS7A01G255300 chr2D 74.257 404 98 6 135 535 604003478 604003878 7.050000e-37 165.0
9 TraesCS7A01G255300 chr2D 81.771 192 34 1 2753 2944 138176857 138176667 3.280000e-35 159.0
10 TraesCS7A01G255300 chr1D 85.741 533 74 2 1 531 381988878 381989410 2.140000e-156 562.0
11 TraesCS7A01G255300 chr5D 77.419 341 71 6 198 535 463920226 463919889 6.950000e-47 198.0
12 TraesCS7A01G255300 chr5D 74.533 428 106 3 107 532 5255599 5256025 1.950000e-42 183.0
13 TraesCS7A01G255300 chr6B 76.833 341 73 6 198 535 75024605 75024268 1.510000e-43 187.0
14 TraesCS7A01G255300 chr4A 78.231 147 27 5 2756 2898 583416503 583416648 4.370000e-14 89.8
15 TraesCS7A01G255300 chr5A 74.449 227 40 10 2687 2909 684696933 684697145 7.310000e-12 82.4
16 TraesCS7A01G255300 chrUn 81.944 72 11 2 2857 2927 323125823 323125893 3.420000e-05 60.2
17 TraesCS7A01G255300 chrUn 81.944 72 11 2 2857 2927 323129039 323129109 3.420000e-05 60.2
18 TraesCS7A01G255300 chrUn 85.000 60 7 2 2869 2927 353153710 353153652 3.420000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G255300 chr7A 243216783 243219960 3177 True 5869.0 5869 100.000 1 3178 1 chr7A.!!$R1 3177
1 TraesCS7A01G255300 chr7B 201262853 201264887 2034 True 1507.5 2754 93.245 530 2595 2 chr7B.!!$R1 2065
2 TraesCS7A01G255300 chr6A 475904266 475904801 535 True 841.0 841 94.972 1 536 1 chr6A.!!$R1 535
3 TraesCS7A01G255300 chr2B 171006057 171006593 536 False 747.0 747 91.806 1 536 1 chr2B.!!$F1 535
4 TraesCS7A01G255300 chr2D 55297614 55298150 536 True 708.0 708 90.503 1 536 1 chr2D.!!$R1 535
5 TraesCS7A01G255300 chr2D 55312112 55312648 536 True 708.0 708 90.503 1 536 1 chr2D.!!$R2 535
6 TraesCS7A01G255300 chr1D 381988878 381989410 532 False 562.0 562 85.741 1 531 1 chr1D.!!$F1 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
740 747 0.040067 AAAAGGCAAAAGCGAGCTCG 60.040 50.0 31.37 31.37 43.27 5.03 F
745 752 0.041312 GCAAAAGCGAGCTCGTGAAA 60.041 50.0 34.46 0.00 42.22 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 1824 0.802607 GGCTCGATGTCGTCCAAGAC 60.803 60.0 2.04 0.00 41.30 3.01 R
2744 2774 0.038435 CCCATGACACGCAATTTGCA 60.038 50.0 20.56 1.59 45.36 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.914983 TGCTTCATCACATCTCTTCCTTT 58.085 39.130 0.00 0.00 0.00 3.11
170 172 3.247442 TCAGGTTGTTGTAAGATACGCG 58.753 45.455 3.53 3.53 0.00 6.01
231 233 2.247897 AGTCCTTAAAACCCAAACCCCA 59.752 45.455 0.00 0.00 0.00 4.96
275 277 0.958091 CTTCCACGAAACCCAATGCA 59.042 50.000 0.00 0.00 0.00 3.96
351 353 3.969976 AGATGCTTACATAGGCCTCTTGA 59.030 43.478 9.68 0.00 36.35 3.02
382 384 6.743575 AAACAAGACATAGAATACACAGCC 57.256 37.500 0.00 0.00 0.00 4.85
453 455 2.265367 TGTGCTCTCAATCCAACCCTA 58.735 47.619 0.00 0.00 0.00 3.53
509 512 2.041701 AGGCACCACTTTTTGAAGCAT 58.958 42.857 0.00 0.00 0.00 3.79
559 565 4.731000 CAGTCAGTAGATAAGAACTTCGCG 59.269 45.833 0.00 0.00 0.00 5.87
589 596 2.910479 ACGCACAGTGACGGAGGA 60.910 61.111 17.78 0.00 0.00 3.71
598 605 2.265904 TGACGGAGGACAGTCCACG 61.266 63.158 26.32 26.32 42.34 4.94
647 654 0.320374 TTTGGAGTCACCCACGCTAG 59.680 55.000 0.00 0.00 35.62 3.42
707 714 1.775208 CAAACGACAAAAGCAAGCTCG 59.225 47.619 0.00 0.00 0.00 5.03
709 716 1.014352 ACGACAAAAGCAAGCTCGTT 58.986 45.000 0.00 0.00 0.00 3.85
710 717 1.400494 ACGACAAAAGCAAGCTCGTTT 59.600 42.857 0.00 0.00 0.00 3.60
711 718 2.036933 CGACAAAAGCAAGCTCGTTTC 58.963 47.619 0.00 0.00 0.00 2.78
712 719 2.036933 GACAAAAGCAAGCTCGTTTCG 58.963 47.619 0.00 0.00 0.00 3.46
713 720 0.772341 CAAAAGCAAGCTCGTTTCGC 59.228 50.000 0.00 0.00 0.00 4.70
714 721 0.663153 AAAAGCAAGCTCGTTTCGCT 59.337 45.000 0.00 0.00 39.94 4.93
715 722 1.508632 AAAGCAAGCTCGTTTCGCTA 58.491 45.000 0.00 0.00 36.56 4.26
716 723 1.508632 AAGCAAGCTCGTTTCGCTAA 58.491 45.000 0.00 0.00 36.56 3.09
717 724 1.508632 AGCAAGCTCGTTTCGCTAAA 58.491 45.000 0.00 0.00 36.56 1.85
718 725 1.871039 AGCAAGCTCGTTTCGCTAAAA 59.129 42.857 0.00 0.00 36.56 1.52
719 726 2.289547 AGCAAGCTCGTTTCGCTAAAAA 59.710 40.909 0.00 0.00 36.56 1.94
739 746 2.140065 AAAAAGGCAAAAGCGAGCTC 57.860 45.000 2.73 2.73 0.00 4.09
740 747 0.040067 AAAAGGCAAAAGCGAGCTCG 60.040 50.000 31.37 31.37 43.27 5.03
741 748 1.166531 AAAGGCAAAAGCGAGCTCGT 61.167 50.000 34.46 19.89 42.22 4.18
742 749 1.845809 AAGGCAAAAGCGAGCTCGTG 61.846 55.000 34.46 25.50 42.22 4.35
743 750 2.317609 GGCAAAAGCGAGCTCGTGA 61.318 57.895 34.46 0.00 42.22 4.35
744 751 1.569493 GCAAAAGCGAGCTCGTGAA 59.431 52.632 34.46 0.00 42.22 3.18
745 752 0.041312 GCAAAAGCGAGCTCGTGAAA 60.041 50.000 34.46 0.00 42.22 2.69
746 753 1.596954 GCAAAAGCGAGCTCGTGAAAA 60.597 47.619 34.46 0.00 42.22 2.29
747 754 2.301787 CAAAAGCGAGCTCGTGAAAAG 58.698 47.619 34.46 17.84 42.22 2.27
748 755 1.865865 AAAGCGAGCTCGTGAAAAGA 58.134 45.000 34.46 0.00 42.22 2.52
766 773 3.518634 AGAGAAAGATCGAAGAGGCAC 57.481 47.619 0.00 0.00 43.63 5.01
818 825 1.334243 CGGCGAACCCTAGAGAAGTAG 59.666 57.143 0.00 0.00 0.00 2.57
819 826 2.652590 GGCGAACCCTAGAGAAGTAGA 58.347 52.381 0.00 0.00 0.00 2.59
820 827 2.619646 GGCGAACCCTAGAGAAGTAGAG 59.380 54.545 0.00 0.00 0.00 2.43
821 828 3.543665 GCGAACCCTAGAGAAGTAGAGA 58.456 50.000 0.00 0.00 0.00 3.10
822 829 3.946558 GCGAACCCTAGAGAAGTAGAGAA 59.053 47.826 0.00 0.00 0.00 2.87
823 830 4.201940 GCGAACCCTAGAGAAGTAGAGAAC 60.202 50.000 0.00 0.00 0.00 3.01
824 831 4.034279 CGAACCCTAGAGAAGTAGAGAACG 59.966 50.000 0.00 0.00 0.00 3.95
906 913 0.767060 AAAGGAAGGTCGTGGAGGGT 60.767 55.000 0.00 0.00 0.00 4.34
934 941 1.231963 AAGGAGGACCAAGGGTTGTT 58.768 50.000 0.00 0.00 35.25 2.83
943 950 1.459348 AAGGGTTGTTGCCAAGGGG 60.459 57.895 0.00 0.00 37.18 4.79
998 1015 2.347490 GCAAGCCCAGACGGAAGA 59.653 61.111 0.00 0.00 0.00 2.87
1007 1024 1.341531 CCAGACGGAAGACAGTGAGTT 59.658 52.381 0.00 0.00 0.00 3.01
1016 1038 1.346068 AGACAGTGAGTTCCCTCTTGC 59.654 52.381 0.00 0.00 38.61 4.01
1020 1042 2.217038 TGAGTTCCCTCTTGCGCCT 61.217 57.895 4.18 0.00 38.61 5.52
1025 1047 0.958822 TTCCCTCTTGCGCCTTTTTC 59.041 50.000 4.18 0.00 0.00 2.29
1033 1055 1.289066 GCGCCTTTTTCCAGTTCCC 59.711 57.895 0.00 0.00 0.00 3.97
1035 1057 1.532604 CGCCTTTTTCCAGTTCCCCC 61.533 60.000 0.00 0.00 0.00 5.40
1050 1072 1.693606 TCCCCCGTCTTACGTTTTTCT 59.306 47.619 0.00 0.00 40.58 2.52
1053 1075 3.058708 CCCCCGTCTTACGTTTTTCTTTC 60.059 47.826 0.00 0.00 40.58 2.62
1054 1076 3.560896 CCCCGTCTTACGTTTTTCTTTCA 59.439 43.478 0.00 0.00 40.58 2.69
1062 1084 6.957077 TCTTACGTTTTTCTTTCAGTTGTTCG 59.043 34.615 0.00 0.00 0.00 3.95
1067 1089 5.630661 TTTTCTTTCAGTTGTTCGTTCCA 57.369 34.783 0.00 0.00 0.00 3.53
1077 1099 3.907894 TGTTCGTTCCAAAATAGGTGC 57.092 42.857 0.00 0.00 0.00 5.01
1097 1127 2.608090 GCCGAGCTCACCTAAATTGTAC 59.392 50.000 15.40 0.00 0.00 2.90
1152 1182 1.436600 ACATTCAGTGAGCAAGCGAG 58.563 50.000 0.00 0.00 0.00 5.03
1201 1231 1.003355 CCGTGGTGGACTCTGCATT 60.003 57.895 0.00 0.00 42.00 3.56
1212 1242 2.810274 GACTCTGCATTGCTTGAGTTCA 59.190 45.455 26.24 1.30 40.59 3.18
1213 1243 2.551459 ACTCTGCATTGCTTGAGTTCAC 59.449 45.455 22.67 0.00 38.82 3.18
1218 1248 3.882288 TGCATTGCTTGAGTTCACAGTAA 59.118 39.130 10.49 0.00 0.00 2.24
1231 1261 5.233689 AGTTCACAGTAAACTACGAGCAAAC 59.766 40.000 0.00 0.00 35.25 2.93
1241 1271 1.961793 ACGAGCAAACCAAGCACTTA 58.038 45.000 0.00 0.00 0.00 2.24
1297 1327 4.308458 CGGTGGGCACGACTGGAA 62.308 66.667 0.00 0.00 39.84 3.53
1370 1400 5.012664 TCTCTCTATCTACCTCTACTGCAGG 59.987 48.000 19.93 2.50 37.03 4.85
1393 1423 0.175073 CCCGTAACTACTGTCAGGGC 59.825 60.000 4.53 0.00 31.10 5.19
1457 1487 1.559831 CGATAGCAGCAACGTCATCA 58.440 50.000 0.00 0.00 0.00 3.07
1593 1623 1.999735 ACATCTTGGTTATGCGTGACG 59.000 47.619 0.00 0.00 0.00 4.35
1627 1657 1.831106 GCCACCCCCAAAAATAGGAAG 59.169 52.381 0.00 0.00 0.00 3.46
1634 1664 5.222547 ACCCCCAAAAATAGGAAGTCATCTT 60.223 40.000 0.00 0.00 36.51 2.40
1647 1677 6.156949 AGGAAGTCATCTTAACAGCCTAATCA 59.843 38.462 0.00 0.00 33.64 2.57
1754 1784 1.160137 CTCCGGTTTTCAGAGCCAAG 58.840 55.000 0.00 0.00 0.00 3.61
1794 1824 1.133025 GGGCCACATCTTCAAACATCG 59.867 52.381 4.39 0.00 0.00 3.84
1802 1832 4.452455 ACATCTTCAAACATCGTCTTGGAC 59.548 41.667 0.00 0.00 0.00 4.02
1879 1909 3.869623 CTGGAGATGACAGGGTTGG 57.130 57.895 0.00 0.00 32.38 3.77
1900 1930 0.526524 CGCTCTCCACCGATTGAGAC 60.527 60.000 0.00 0.00 34.12 3.36
1919 1949 1.470098 ACGTTTCATCATCTGCTTGCC 59.530 47.619 0.00 0.00 0.00 4.52
1997 2027 4.443598 GGGGAGAATGTGTCACTAGATTCC 60.444 50.000 4.27 5.28 32.44 3.01
2065 2095 5.126061 AGTTGAAGACAAAGTGCATTGACTT 59.874 36.000 14.68 14.68 44.14 3.01
2066 2096 6.318648 AGTTGAAGACAAAGTGCATTGACTTA 59.681 34.615 14.73 2.18 42.47 2.24
2072 2102 6.430925 AGACAAAGTGCATTGACTTATTAGCA 59.569 34.615 7.04 0.00 35.01 3.49
2076 2106 4.334759 AGTGCATTGACTTATTAGCAGCTG 59.665 41.667 10.11 10.11 32.03 4.24
2129 2159 0.463620 GTTTTGTGCTCTTGGGCCAA 59.536 50.000 19.68 19.68 0.00 4.52
2158 2188 1.063174 GGCGCTTATTGCTGAGTTGAG 59.937 52.381 7.64 0.00 40.11 3.02
2182 2212 2.092212 AGAGGGTTGAGGCATAACATGG 60.092 50.000 0.00 0.00 0.00 3.66
2190 2220 6.351286 GGTTGAGGCATAACATGGAGAATTTT 60.351 38.462 0.00 0.00 0.00 1.82
2206 2236 6.369059 AGAATTTTTCATGCCTAGACATCG 57.631 37.500 0.00 0.00 0.00 3.84
2213 2243 4.207955 TCATGCCTAGACATCGAAGTACT 58.792 43.478 0.00 0.00 0.00 2.73
2257 2287 8.908786 ATATGATGAAAATCGTACTGGTTGAT 57.091 30.769 0.00 0.00 0.00 2.57
2265 2295 9.438291 GAAAATCGTACTGGTTGATTCATATTG 57.562 33.333 0.00 0.00 31.42 1.90
2398 2428 2.364632 CCCGATGCACCTTTTCATACA 58.635 47.619 0.00 0.00 0.00 2.29
2412 2442 9.034800 ACCTTTTCATACATGGAATTGTACAAT 57.965 29.630 15.47 15.47 35.04 2.71
2417 2447 9.693739 TTCATACATGGAATTGTACAATTACCT 57.306 29.630 31.56 23.15 40.16 3.08
2421 2451 8.506168 ACATGGAATTGTACAATTACCTAGTG 57.494 34.615 31.56 25.79 40.16 2.74
2422 2452 6.995511 TGGAATTGTACAATTACCTAGTGC 57.004 37.500 31.56 18.11 40.16 4.40
2423 2453 6.477253 TGGAATTGTACAATTACCTAGTGCA 58.523 36.000 31.56 18.71 40.16 4.57
2424 2454 6.943146 TGGAATTGTACAATTACCTAGTGCAA 59.057 34.615 31.56 14.25 40.16 4.08
2425 2455 7.613801 TGGAATTGTACAATTACCTAGTGCAAT 59.386 33.333 31.56 10.03 45.89 3.56
2490 2520 5.060816 AGCATTTGATTTTGTTGCGTTATCG 59.939 36.000 0.00 0.00 38.32 2.92
2517 2547 9.356433 GTGTATGATATCATCATCTCAAGACAG 57.644 37.037 21.42 0.00 46.62 3.51
2526 2556 3.999001 TCATCTCAAGACAGTGCATCAAC 59.001 43.478 0.00 0.00 0.00 3.18
2537 2567 4.201950 ACAGTGCATCAACTGACAAAGTTC 60.202 41.667 11.09 0.00 46.60 3.01
2545 2575 3.329929 ACTGACAAAGTTCGTATCCCC 57.670 47.619 0.00 0.00 34.57 4.81
2583 2613 6.852420 AAGAGAAAGCAGTACTGTATGGTA 57.148 37.500 23.44 0.00 0.00 3.25
2595 2625 8.421784 CAGTACTGTATGGTATCATTAGGTTGT 58.578 37.037 15.06 0.00 34.96 3.32
2596 2626 9.650714 AGTACTGTATGGTATCATTAGGTTGTA 57.349 33.333 0.00 0.00 34.96 2.41
2615 2645 9.461312 AGGTTGTATATATCTCTGACTCTGATC 57.539 37.037 0.00 0.00 0.00 2.92
2616 2646 8.682710 GGTTGTATATATCTCTGACTCTGATCC 58.317 40.741 0.00 0.00 0.00 3.36
2617 2647 9.461312 GTTGTATATATCTCTGACTCTGATCCT 57.539 37.037 0.00 0.00 0.00 3.24
2622 2652 5.612725 ATCTCTGACTCTGATCCTTTTCC 57.387 43.478 0.00 0.00 0.00 3.13
2623 2653 4.682563 TCTCTGACTCTGATCCTTTTCCT 58.317 43.478 0.00 0.00 0.00 3.36
2624 2654 4.465660 TCTCTGACTCTGATCCTTTTCCTG 59.534 45.833 0.00 0.00 0.00 3.86
2625 2655 4.420206 TCTGACTCTGATCCTTTTCCTGA 58.580 43.478 0.00 0.00 0.00 3.86
2626 2656 5.028802 TCTGACTCTGATCCTTTTCCTGAT 58.971 41.667 0.00 0.00 0.00 2.90
2627 2657 5.095145 TGACTCTGATCCTTTTCCTGATG 57.905 43.478 0.00 0.00 0.00 3.07
2628 2658 4.779489 TGACTCTGATCCTTTTCCTGATGA 59.221 41.667 0.00 0.00 0.00 2.92
2629 2659 5.105023 TGACTCTGATCCTTTTCCTGATGAG 60.105 44.000 0.00 0.00 0.00 2.90
2630 2660 4.782156 ACTCTGATCCTTTTCCTGATGAGT 59.218 41.667 0.00 0.00 0.00 3.41
2631 2661 5.250313 ACTCTGATCCTTTTCCTGATGAGTT 59.750 40.000 0.00 0.00 0.00 3.01
2632 2662 5.738909 TCTGATCCTTTTCCTGATGAGTTC 58.261 41.667 0.00 0.00 0.00 3.01
2633 2663 5.486775 TCTGATCCTTTTCCTGATGAGTTCT 59.513 40.000 0.00 0.00 0.00 3.01
2634 2664 5.494724 TGATCCTTTTCCTGATGAGTTCTG 58.505 41.667 0.00 0.00 0.00 3.02
2635 2665 4.292186 TCCTTTTCCTGATGAGTTCTGG 57.708 45.455 0.00 0.00 43.14 3.86
2636 2666 3.009473 TCCTTTTCCTGATGAGTTCTGGG 59.991 47.826 0.00 0.00 42.29 4.45
2637 2667 3.245052 CCTTTTCCTGATGAGTTCTGGGT 60.245 47.826 0.00 0.00 42.29 4.51
2638 2668 4.019321 CCTTTTCCTGATGAGTTCTGGGTA 60.019 45.833 0.00 0.00 42.29 3.69
2639 2669 4.826274 TTTCCTGATGAGTTCTGGGTAG 57.174 45.455 0.00 0.00 42.29 3.18
2640 2670 3.474798 TCCTGATGAGTTCTGGGTAGT 57.525 47.619 0.00 0.00 42.29 2.73
2641 2671 4.603094 TCCTGATGAGTTCTGGGTAGTA 57.397 45.455 0.00 0.00 42.29 1.82
2642 2672 5.144159 TCCTGATGAGTTCTGGGTAGTAT 57.856 43.478 0.00 0.00 42.29 2.12
2643 2673 5.529289 TCCTGATGAGTTCTGGGTAGTATT 58.471 41.667 0.00 0.00 42.29 1.89
2644 2674 5.964477 TCCTGATGAGTTCTGGGTAGTATTT 59.036 40.000 0.00 0.00 42.29 1.40
2645 2675 7.130099 TCCTGATGAGTTCTGGGTAGTATTTA 58.870 38.462 0.00 0.00 42.29 1.40
2646 2676 7.287927 TCCTGATGAGTTCTGGGTAGTATTTAG 59.712 40.741 0.00 0.00 42.29 1.85
2647 2677 6.817184 TGATGAGTTCTGGGTAGTATTTAGC 58.183 40.000 0.00 0.00 0.00 3.09
2648 2678 6.382859 TGATGAGTTCTGGGTAGTATTTAGCA 59.617 38.462 0.00 0.00 0.00 3.49
2649 2679 6.614694 TGAGTTCTGGGTAGTATTTAGCAA 57.385 37.500 0.00 0.00 0.00 3.91
2650 2680 6.640518 TGAGTTCTGGGTAGTATTTAGCAAG 58.359 40.000 0.00 0.00 0.00 4.01
2651 2681 6.439375 TGAGTTCTGGGTAGTATTTAGCAAGA 59.561 38.462 0.00 0.00 0.00 3.02
2652 2682 7.125811 TGAGTTCTGGGTAGTATTTAGCAAGAT 59.874 37.037 0.00 0.00 0.00 2.40
2653 2683 8.548880 AGTTCTGGGTAGTATTTAGCAAGATA 57.451 34.615 0.00 0.00 0.00 1.98
2654 2684 8.989131 AGTTCTGGGTAGTATTTAGCAAGATAA 58.011 33.333 0.00 0.00 0.00 1.75
2655 2685 9.609346 GTTCTGGGTAGTATTTAGCAAGATAAA 57.391 33.333 0.00 0.00 0.00 1.40
2710 2740 9.979578 AACTGAAATGCTAAAAACATAACATCA 57.020 25.926 0.00 0.00 0.00 3.07
2711 2741 9.630098 ACTGAAATGCTAAAAACATAACATCAG 57.370 29.630 0.00 0.00 34.14 2.90
2712 2742 9.844790 CTGAAATGCTAAAAACATAACATCAGA 57.155 29.630 0.00 0.00 32.06 3.27
2726 2756 9.807649 ACATAACATCAGATTTTTAAGAATGGC 57.192 29.630 0.00 0.00 0.00 4.40
2727 2757 9.806203 CATAACATCAGATTTTTAAGAATGGCA 57.194 29.630 0.00 0.00 0.00 4.92
2730 2760 9.729281 AACATCAGATTTTTAAGAATGGCAAAT 57.271 25.926 0.00 0.00 0.00 2.32
2731 2761 9.374838 ACATCAGATTTTTAAGAATGGCAAATC 57.625 29.630 0.00 0.00 35.11 2.17
2732 2762 8.537223 CATCAGATTTTTAAGAATGGCAAATCG 58.463 33.333 0.00 0.00 38.39 3.34
2733 2763 7.825681 TCAGATTTTTAAGAATGGCAAATCGA 58.174 30.769 0.00 0.00 38.39 3.59
2734 2764 8.303156 TCAGATTTTTAAGAATGGCAAATCGAA 58.697 29.630 0.00 0.00 38.39 3.71
2735 2765 8.375465 CAGATTTTTAAGAATGGCAAATCGAAC 58.625 33.333 0.00 0.00 38.39 3.95
2736 2766 8.306761 AGATTTTTAAGAATGGCAAATCGAACT 58.693 29.630 0.00 0.00 38.39 3.01
2737 2767 8.831715 ATTTTTAAGAATGGCAAATCGAACTT 57.168 26.923 0.00 0.00 0.00 2.66
2738 2768 8.655651 TTTTTAAGAATGGCAAATCGAACTTT 57.344 26.923 0.00 0.00 0.00 2.66
2739 2769 8.655651 TTTTAAGAATGGCAAATCGAACTTTT 57.344 26.923 0.00 0.00 0.00 2.27
2740 2770 8.655651 TTTAAGAATGGCAAATCGAACTTTTT 57.344 26.923 0.00 0.00 0.00 1.94
2763 2793 2.740668 GCAAATTGCGTGTCATGGG 58.259 52.632 0.90 0.00 31.71 4.00
2764 2794 1.353609 GCAAATTGCGTGTCATGGGC 61.354 55.000 0.90 0.00 31.71 5.36
2765 2795 0.038435 CAAATTGCGTGTCATGGGCA 60.038 50.000 0.00 0.00 34.35 5.36
2766 2796 0.896923 AAATTGCGTGTCATGGGCAT 59.103 45.000 0.00 0.00 36.44 4.40
2767 2797 0.173935 AATTGCGTGTCATGGGCATG 59.826 50.000 0.00 0.00 40.09 4.06
2768 2798 1.669049 ATTGCGTGTCATGGGCATGG 61.669 55.000 10.77 2.09 39.24 3.66
2769 2799 4.197498 GCGTGTCATGGGCATGGC 62.197 66.667 11.56 11.56 43.38 4.40
2774 2804 3.673173 GTCATGGGCATGGCAATTC 57.327 52.632 22.06 7.17 42.66 2.17
2775 2805 0.249155 GTCATGGGCATGGCAATTCG 60.249 55.000 22.06 4.58 42.66 3.34
2776 2806 1.593209 CATGGGCATGGCAATTCGC 60.593 57.895 22.06 2.65 41.28 4.70
2777 2807 1.759299 ATGGGCATGGCAATTCGCT 60.759 52.632 22.06 0.00 41.91 4.93
2778 2808 1.332144 ATGGGCATGGCAATTCGCTT 61.332 50.000 22.06 0.00 41.91 4.68
2779 2809 1.218854 GGGCATGGCAATTCGCTTT 59.781 52.632 22.06 0.00 41.91 3.51
2780 2810 0.459489 GGGCATGGCAATTCGCTTTA 59.541 50.000 22.06 0.00 41.91 1.85
2781 2811 1.536709 GGGCATGGCAATTCGCTTTAG 60.537 52.381 22.06 0.00 41.91 1.85
2782 2812 1.203065 GCATGGCAATTCGCTTTAGC 58.797 50.000 0.00 0.00 41.91 3.09
2783 2813 1.469595 GCATGGCAATTCGCTTTAGCA 60.470 47.619 2.29 0.00 42.21 3.49
2784 2814 2.878580 CATGGCAATTCGCTTTAGCAA 58.121 42.857 2.29 0.00 42.21 3.91
2785 2815 2.634982 TGGCAATTCGCTTTAGCAAG 57.365 45.000 2.29 0.00 42.21 4.01
2797 2827 2.965572 TTAGCAAGCATGGCAAATCC 57.034 45.000 0.00 0.00 37.68 3.01
2798 2828 2.148446 TAGCAAGCATGGCAAATCCT 57.852 45.000 0.00 0.00 37.68 3.24
2799 2829 0.535335 AGCAAGCATGGCAAATCCTG 59.465 50.000 0.00 0.00 37.68 3.86
2800 2830 0.533491 GCAAGCATGGCAAATCCTGA 59.467 50.000 0.00 0.00 32.79 3.86
2801 2831 1.738030 GCAAGCATGGCAAATCCTGAC 60.738 52.381 0.00 0.00 32.79 3.51
2825 2855 5.796424 AAAAAGCTGAACATGACAGGATT 57.204 34.783 19.70 8.31 36.09 3.01
2826 2856 5.796424 AAAAGCTGAACATGACAGGATTT 57.204 34.783 19.70 12.03 36.09 2.17
2827 2857 4.778534 AAGCTGAACATGACAGGATTTG 57.221 40.909 19.70 0.00 36.09 2.32
2828 2858 2.490903 AGCTGAACATGACAGGATTTGC 59.509 45.455 19.70 9.84 36.09 3.68
2829 2859 2.416431 GCTGAACATGACAGGATTTGCC 60.416 50.000 19.70 0.00 36.09 4.52
2830 2860 1.811965 TGAACATGACAGGATTTGCCG 59.188 47.619 0.00 0.00 43.43 5.69
2831 2861 1.812571 GAACATGACAGGATTTGCCGT 59.187 47.619 0.00 0.00 43.43 5.68
2832 2862 1.167851 ACATGACAGGATTTGCCGTG 58.832 50.000 0.00 0.00 43.43 4.94
2833 2863 0.179156 CATGACAGGATTTGCCGTGC 60.179 55.000 0.00 0.00 43.43 5.34
2834 2864 0.322816 ATGACAGGATTTGCCGTGCT 60.323 50.000 0.00 0.00 43.43 4.40
2835 2865 0.537143 TGACAGGATTTGCCGTGCTT 60.537 50.000 0.00 0.00 43.43 3.91
2836 2866 0.109597 GACAGGATTTGCCGTGCTTG 60.110 55.000 0.00 0.00 43.43 4.01
2837 2867 1.444895 CAGGATTTGCCGTGCTTGC 60.445 57.895 0.00 0.00 43.43 4.01
2838 2868 2.125952 GGATTTGCCGTGCTTGCC 60.126 61.111 0.00 0.00 0.00 4.52
2839 2869 2.504681 GATTTGCCGTGCTTGCCG 60.505 61.111 0.00 0.00 0.00 5.69
2840 2870 2.976840 GATTTGCCGTGCTTGCCGA 61.977 57.895 5.36 0.00 0.00 5.54
2841 2871 2.470801 GATTTGCCGTGCTTGCCGAA 62.471 55.000 5.36 0.00 0.00 4.30
2842 2872 2.476534 ATTTGCCGTGCTTGCCGAAG 62.477 55.000 5.36 0.00 0.00 3.79
2859 2889 2.544267 CGAAGGGAATTACCAGATTCGC 59.456 50.000 14.55 6.57 44.65 4.70
2861 2891 1.226746 GGGAATTACCAGATTCGCGG 58.773 55.000 6.13 0.00 38.60 6.46
2862 2892 0.586802 GGAATTACCAGATTCGCGGC 59.413 55.000 6.13 0.00 36.99 6.53
2863 2893 1.295792 GAATTACCAGATTCGCGGCA 58.704 50.000 6.13 0.00 0.00 5.69
2864 2894 1.003866 GAATTACCAGATTCGCGGCAC 60.004 52.381 6.13 0.00 0.00 5.01
2865 2895 0.107897 ATTACCAGATTCGCGGCACA 60.108 50.000 6.13 0.00 0.00 4.57
2866 2896 0.107897 TTACCAGATTCGCGGCACAT 60.108 50.000 6.13 0.00 0.00 3.21
2867 2897 0.747852 TACCAGATTCGCGGCACATA 59.252 50.000 6.13 0.00 0.00 2.29
2868 2898 0.107897 ACCAGATTCGCGGCACATAA 60.108 50.000 6.13 0.00 0.00 1.90
2869 2899 1.229428 CCAGATTCGCGGCACATAAT 58.771 50.000 6.13 0.00 0.00 1.28
2870 2900 1.603802 CCAGATTCGCGGCACATAATT 59.396 47.619 6.13 0.00 0.00 1.40
2871 2901 2.033299 CCAGATTCGCGGCACATAATTT 59.967 45.455 6.13 0.00 0.00 1.82
2872 2902 3.038017 CAGATTCGCGGCACATAATTTG 58.962 45.455 6.13 0.00 0.00 2.32
2873 2903 1.780860 GATTCGCGGCACATAATTTGC 59.219 47.619 6.13 0.00 39.41 3.68
2884 2914 6.484818 GCACATAATTTGCCAGAAAAATGT 57.515 33.333 0.00 0.00 33.58 2.71
2885 2915 6.901265 GCACATAATTTGCCAGAAAAATGTT 58.099 32.000 0.00 0.00 33.58 2.71
2886 2916 7.361894 GCACATAATTTGCCAGAAAAATGTTT 58.638 30.769 0.00 0.00 33.58 2.83
2887 2917 7.324135 GCACATAATTTGCCAGAAAAATGTTTG 59.676 33.333 0.00 0.00 33.58 2.93
2888 2918 8.557864 CACATAATTTGCCAGAAAAATGTTTGA 58.442 29.630 0.00 0.00 0.00 2.69
2889 2919 9.287373 ACATAATTTGCCAGAAAAATGTTTGAT 57.713 25.926 0.00 0.00 0.00 2.57
2892 2922 8.859517 AATTTGCCAGAAAAATGTTTGATTTG 57.140 26.923 0.00 0.00 0.00 2.32
2893 2923 5.421212 TGCCAGAAAAATGTTTGATTTGC 57.579 34.783 0.00 0.00 0.00 3.68
2894 2924 4.275443 TGCCAGAAAAATGTTTGATTTGCC 59.725 37.500 0.00 0.00 0.00 4.52
2895 2925 4.275443 GCCAGAAAAATGTTTGATTTGCCA 59.725 37.500 0.00 0.00 0.00 4.92
2896 2926 5.048573 GCCAGAAAAATGTTTGATTTGCCAT 60.049 36.000 0.00 0.00 0.00 4.40
2897 2927 6.375377 CCAGAAAAATGTTTGATTTGCCATG 58.625 36.000 0.00 0.00 0.00 3.66
2898 2928 6.016943 CCAGAAAAATGTTTGATTTGCCATGT 60.017 34.615 0.00 0.00 0.00 3.21
2899 2929 7.419204 CAGAAAAATGTTTGATTTGCCATGTT 58.581 30.769 0.00 0.00 0.00 2.71
2900 2930 7.916450 CAGAAAAATGTTTGATTTGCCATGTTT 59.084 29.630 0.00 0.00 29.61 2.83
2901 2931 9.118300 AGAAAAATGTTTGATTTGCCATGTTTA 57.882 25.926 0.00 0.00 27.65 2.01
2902 2932 9.727627 GAAAAATGTTTGATTTGCCATGTTTAA 57.272 25.926 0.00 0.00 27.65 1.52
2905 2935 9.733219 AAATGTTTGATTTGCCATGTTTAAAAG 57.267 25.926 0.00 0.00 0.00 2.27
2906 2936 7.856145 TGTTTGATTTGCCATGTTTAAAAGT 57.144 28.000 0.00 0.00 0.00 2.66
2907 2937 7.914465 TGTTTGATTTGCCATGTTTAAAAGTC 58.086 30.769 0.00 0.00 0.00 3.01
2908 2938 7.768120 TGTTTGATTTGCCATGTTTAAAAGTCT 59.232 29.630 0.00 0.00 0.00 3.24
2909 2939 8.611757 GTTTGATTTGCCATGTTTAAAAGTCTT 58.388 29.630 0.00 0.00 0.00 3.01
2910 2940 9.823647 TTTGATTTGCCATGTTTAAAAGTCTTA 57.176 25.926 0.00 0.00 0.00 2.10
2911 2941 9.995003 TTGATTTGCCATGTTTAAAAGTCTTAT 57.005 25.926 0.00 0.00 0.00 1.73
2914 2944 9.869757 ATTTGCCATGTTTAAAAGTCTTATACC 57.130 29.630 0.00 0.00 0.00 2.73
2915 2945 8.410673 TTGCCATGTTTAAAAGTCTTATACCA 57.589 30.769 0.00 0.00 0.00 3.25
2916 2946 8.050778 TGCCATGTTTAAAAGTCTTATACCAG 57.949 34.615 0.00 0.00 0.00 4.00
2917 2947 7.885922 TGCCATGTTTAAAAGTCTTATACCAGA 59.114 33.333 0.00 0.00 0.00 3.86
2918 2948 8.903820 GCCATGTTTAAAAGTCTTATACCAGAT 58.096 33.333 0.00 0.00 0.00 2.90
2927 2957 8.421673 AAAGTCTTATACCAGATTTCTAACGC 57.578 34.615 0.00 0.00 0.00 4.84
2928 2958 6.207213 AGTCTTATACCAGATTTCTAACGCG 58.793 40.000 3.53 3.53 0.00 6.01
2929 2959 5.401674 GTCTTATACCAGATTTCTAACGCGG 59.598 44.000 12.47 0.00 0.00 6.46
2930 2960 3.814005 ATACCAGATTTCTAACGCGGT 57.186 42.857 12.47 6.42 0.00 5.68
2931 2961 2.467566 ACCAGATTTCTAACGCGGTT 57.532 45.000 12.47 5.03 0.00 4.44
2932 2962 2.774687 ACCAGATTTCTAACGCGGTTT 58.225 42.857 12.47 0.00 0.00 3.27
2933 2963 3.143728 ACCAGATTTCTAACGCGGTTTT 58.856 40.909 12.47 0.00 0.00 2.43
2934 2964 4.317488 ACCAGATTTCTAACGCGGTTTTA 58.683 39.130 12.47 0.00 0.00 1.52
2935 2965 4.939439 ACCAGATTTCTAACGCGGTTTTAT 59.061 37.500 12.47 0.00 0.00 1.40
2936 2966 6.108015 ACCAGATTTCTAACGCGGTTTTATA 58.892 36.000 12.47 0.00 0.00 0.98
2937 2967 6.594937 ACCAGATTTCTAACGCGGTTTTATAA 59.405 34.615 12.47 0.00 0.00 0.98
2938 2968 7.119553 ACCAGATTTCTAACGCGGTTTTATAAA 59.880 33.333 12.47 6.06 0.00 1.40
2939 2969 7.964011 CCAGATTTCTAACGCGGTTTTATAAAA 59.036 33.333 12.47 6.54 0.00 1.52
2940 2970 9.332301 CAGATTTCTAACGCGGTTTTATAAAAA 57.668 29.630 12.47 2.56 0.00 1.94
2941 2971 9.550811 AGATTTCTAACGCGGTTTTATAAAAAG 57.449 29.630 12.47 10.43 0.00 2.27
2942 2972 9.545611 GATTTCTAACGCGGTTTTATAAAAAGA 57.454 29.630 12.47 7.10 0.00 2.52
2943 2973 8.938047 TTTCTAACGCGGTTTTATAAAAAGAG 57.062 30.769 12.47 12.74 0.00 2.85
2944 2974 7.656707 TCTAACGCGGTTTTATAAAAAGAGT 57.343 32.000 12.47 13.29 0.00 3.24
2945 2975 7.512297 TCTAACGCGGTTTTATAAAAAGAGTG 58.488 34.615 12.47 13.88 0.00 3.51
2946 2976 4.469552 ACGCGGTTTTATAAAAAGAGTGC 58.530 39.130 12.47 10.43 0.00 4.40
2947 2977 4.023878 ACGCGGTTTTATAAAAAGAGTGCA 60.024 37.500 12.47 0.00 0.00 4.57
2948 2978 4.319901 CGCGGTTTTATAAAAAGAGTGCAC 59.680 41.667 9.40 9.40 0.00 4.57
2949 2979 5.216648 GCGGTTTTATAAAAAGAGTGCACA 58.783 37.500 21.04 0.00 0.00 4.57
2950 2980 5.688176 GCGGTTTTATAAAAAGAGTGCACAA 59.312 36.000 21.04 0.00 0.00 3.33
2951 2981 6.345487 GCGGTTTTATAAAAAGAGTGCACAAC 60.345 38.462 21.04 12.64 0.00 3.32
2952 2982 6.915843 CGGTTTTATAAAAAGAGTGCACAACT 59.084 34.615 21.04 14.83 43.85 3.16
2953 2983 7.434013 CGGTTTTATAAAAAGAGTGCACAACTT 59.566 33.333 21.04 19.72 40.07 2.66
2954 2984 8.539674 GGTTTTATAAAAAGAGTGCACAACTTG 58.460 33.333 21.04 0.00 40.07 3.16
2955 2985 8.539674 GTTTTATAAAAAGAGTGCACAACTTGG 58.460 33.333 21.04 0.00 40.07 3.61
2956 2986 3.525268 AAAAAGAGTGCACAACTTGGG 57.475 42.857 21.04 0.00 40.07 4.12
2957 2987 2.435372 AAAGAGTGCACAACTTGGGA 57.565 45.000 21.04 0.00 40.07 4.37
2958 2988 2.435372 AAGAGTGCACAACTTGGGAA 57.565 45.000 21.04 0.00 40.07 3.97
2959 2989 1.680338 AGAGTGCACAACTTGGGAAC 58.320 50.000 21.04 0.00 40.07 3.62
2960 2990 1.212935 AGAGTGCACAACTTGGGAACT 59.787 47.619 21.04 4.10 40.07 3.01
2961 2991 2.024414 GAGTGCACAACTTGGGAACTT 58.976 47.619 21.04 0.00 40.07 2.66
2962 2992 1.750778 AGTGCACAACTTGGGAACTTG 59.249 47.619 21.04 0.00 34.57 3.16
2963 2993 1.476488 GTGCACAACTTGGGAACTTGT 59.524 47.619 13.17 0.00 0.00 3.16
2964 2994 2.685897 GTGCACAACTTGGGAACTTGTA 59.314 45.455 13.17 0.00 0.00 2.41
2965 2995 3.317993 GTGCACAACTTGGGAACTTGTAT 59.682 43.478 13.17 0.00 0.00 2.29
2966 2996 3.317711 TGCACAACTTGGGAACTTGTATG 59.682 43.478 0.00 0.00 0.00 2.39
2967 2997 3.568007 GCACAACTTGGGAACTTGTATGA 59.432 43.478 0.00 0.00 0.00 2.15
2968 2998 4.320494 GCACAACTTGGGAACTTGTATGAG 60.320 45.833 0.00 0.00 0.00 2.90
2969 2999 4.821805 CACAACTTGGGAACTTGTATGAGT 59.178 41.667 0.00 0.00 0.00 3.41
2970 3000 4.821805 ACAACTTGGGAACTTGTATGAGTG 59.178 41.667 0.00 0.00 0.00 3.51
2971 3001 4.974645 ACTTGGGAACTTGTATGAGTGA 57.025 40.909 0.00 0.00 0.00 3.41
2972 3002 5.304686 ACTTGGGAACTTGTATGAGTGAA 57.695 39.130 0.00 0.00 0.00 3.18
2973 3003 5.690865 ACTTGGGAACTTGTATGAGTGAAA 58.309 37.500 0.00 0.00 0.00 2.69
2974 3004 6.126409 ACTTGGGAACTTGTATGAGTGAAAA 58.874 36.000 0.00 0.00 0.00 2.29
2975 3005 6.263168 ACTTGGGAACTTGTATGAGTGAAAAG 59.737 38.462 0.00 0.00 0.00 2.27
2976 3006 5.935945 TGGGAACTTGTATGAGTGAAAAGA 58.064 37.500 0.00 0.00 0.00 2.52
2977 3007 6.361433 TGGGAACTTGTATGAGTGAAAAGAA 58.639 36.000 0.00 0.00 0.00 2.52
2978 3008 6.262273 TGGGAACTTGTATGAGTGAAAAGAAC 59.738 38.462 0.00 0.00 0.00 3.01
2979 3009 6.486993 GGGAACTTGTATGAGTGAAAAGAACT 59.513 38.462 0.00 0.00 0.00 3.01
2980 3010 7.355778 GGAACTTGTATGAGTGAAAAGAACTG 58.644 38.462 0.00 0.00 0.00 3.16
2981 3011 7.226720 GGAACTTGTATGAGTGAAAAGAACTGA 59.773 37.037 0.00 0.00 0.00 3.41
2982 3012 8.506168 AACTTGTATGAGTGAAAAGAACTGAA 57.494 30.769 0.00 0.00 0.00 3.02
2983 3013 7.920738 ACTTGTATGAGTGAAAAGAACTGAAC 58.079 34.615 0.00 0.00 0.00 3.18
2984 3014 7.770897 ACTTGTATGAGTGAAAAGAACTGAACT 59.229 33.333 0.00 0.00 0.00 3.01
2985 3015 8.506168 TTGTATGAGTGAAAAGAACTGAACTT 57.494 30.769 0.00 0.00 0.00 2.66
2986 3016 8.506168 TGTATGAGTGAAAAGAACTGAACTTT 57.494 30.769 0.00 0.00 38.91 2.66
2987 3017 8.612619 TGTATGAGTGAAAAGAACTGAACTTTC 58.387 33.333 0.00 0.00 36.71 2.62
2988 3018 7.872113 ATGAGTGAAAAGAACTGAACTTTCT 57.128 32.000 0.00 0.00 36.71 2.52
2989 3019 8.964476 ATGAGTGAAAAGAACTGAACTTTCTA 57.036 30.769 0.00 0.00 36.71 2.10
2990 3020 8.197988 TGAGTGAAAAGAACTGAACTTTCTAC 57.802 34.615 0.00 0.00 36.71 2.59
2991 3021 8.041323 TGAGTGAAAAGAACTGAACTTTCTACT 58.959 33.333 0.00 0.00 36.71 2.57
2992 3022 8.426881 AGTGAAAAGAACTGAACTTTCTACTC 57.573 34.615 0.00 0.00 36.71 2.59
2993 3023 8.261522 AGTGAAAAGAACTGAACTTTCTACTCT 58.738 33.333 0.00 0.00 36.71 3.24
2994 3024 9.530633 GTGAAAAGAACTGAACTTTCTACTCTA 57.469 33.333 0.00 0.00 36.71 2.43
2995 3025 9.530633 TGAAAAGAACTGAACTTTCTACTCTAC 57.469 33.333 0.00 0.00 36.71 2.59
2996 3026 9.752961 GAAAAGAACTGAACTTTCTACTCTACT 57.247 33.333 0.00 0.00 36.71 2.57
2999 3029 9.752961 AAGAACTGAACTTTCTACTCTACTTTC 57.247 33.333 0.00 0.00 32.81 2.62
3000 3030 9.138596 AGAACTGAACTTTCTACTCTACTTTCT 57.861 33.333 0.00 0.00 31.28 2.52
3001 3031 9.752961 GAACTGAACTTTCTACTCTACTTTCTT 57.247 33.333 0.00 0.00 0.00 2.52
3002 3032 9.752961 AACTGAACTTTCTACTCTACTTTCTTC 57.247 33.333 0.00 0.00 0.00 2.87
3003 3033 9.138596 ACTGAACTTTCTACTCTACTTTCTTCT 57.861 33.333 0.00 0.00 0.00 2.85
3004 3034 9.620660 CTGAACTTTCTACTCTACTTTCTTCTC 57.379 37.037 0.00 0.00 0.00 2.87
3005 3035 9.357161 TGAACTTTCTACTCTACTTTCTTCTCT 57.643 33.333 0.00 0.00 0.00 3.10
3006 3036 9.836076 GAACTTTCTACTCTACTTTCTTCTCTC 57.164 37.037 0.00 0.00 0.00 3.20
3007 3037 8.927675 ACTTTCTACTCTACTTTCTTCTCTCA 57.072 34.615 0.00 0.00 0.00 3.27
3008 3038 9.357161 ACTTTCTACTCTACTTTCTTCTCTCAA 57.643 33.333 0.00 0.00 0.00 3.02
3012 3042 9.575868 TCTACTCTACTTTCTTCTCTCAAAAGA 57.424 33.333 0.00 0.00 34.76 2.52
3015 3045 9.892130 ACTCTACTTTCTTCTCTCAAAAGAAAA 57.108 29.630 11.03 0.00 46.50 2.29
3024 3054 8.624776 TCTTCTCTCAAAAGAAAATTGAACTCC 58.375 33.333 0.00 0.00 36.43 3.85
3025 3055 8.525290 TTCTCTCAAAAGAAAATTGAACTCCT 57.475 30.769 0.00 0.00 36.43 3.69
3026 3056 8.525290 TCTCTCAAAAGAAAATTGAACTCCTT 57.475 30.769 0.00 0.00 36.43 3.36
3027 3057 8.971073 TCTCTCAAAAGAAAATTGAACTCCTTT 58.029 29.630 0.00 0.00 36.43 3.11
3028 3058 9.591792 CTCTCAAAAGAAAATTGAACTCCTTTT 57.408 29.630 0.00 0.00 36.43 2.27
3029 3059 9.942850 TCTCAAAAGAAAATTGAACTCCTTTTT 57.057 25.926 0.00 0.00 36.43 1.94
3045 3075 2.765689 TTTTTCCTCTTTCAGGGCCA 57.234 45.000 6.18 0.00 43.67 5.36
3046 3076 2.999185 TTTTCCTCTTTCAGGGCCAT 57.001 45.000 6.18 0.00 43.67 4.40
3047 3077 2.999185 TTTCCTCTTTCAGGGCCATT 57.001 45.000 6.18 0.00 43.67 3.16
3048 3078 2.514458 TTCCTCTTTCAGGGCCATTC 57.486 50.000 6.18 0.00 43.67 2.67
3049 3079 0.253044 TCCTCTTTCAGGGCCATTCG 59.747 55.000 6.18 0.00 43.67 3.34
3050 3080 1.379642 CCTCTTTCAGGGCCATTCGC 61.380 60.000 6.18 0.00 38.91 4.70
3051 3081 0.677731 CTCTTTCAGGGCCATTCGCA 60.678 55.000 6.18 0.00 40.31 5.10
3052 3082 0.251121 TCTTTCAGGGCCATTCGCAA 60.251 50.000 6.18 0.00 40.31 4.85
3053 3083 0.602562 CTTTCAGGGCCATTCGCAAA 59.397 50.000 6.18 0.00 40.31 3.68
3054 3084 0.602562 TTTCAGGGCCATTCGCAAAG 59.397 50.000 6.18 0.00 40.31 2.77
3055 3085 1.876497 TTCAGGGCCATTCGCAAAGC 61.876 55.000 6.18 0.00 40.31 3.51
3066 3096 2.048877 GCAAAGCGCCACTGCAAT 60.049 55.556 18.05 0.00 37.32 3.56
3067 3097 2.377310 GCAAAGCGCCACTGCAATG 61.377 57.895 18.05 0.00 37.32 2.82
3068 3098 1.286570 CAAAGCGCCACTGCAATGA 59.713 52.632 2.29 0.00 37.32 2.57
3069 3099 1.005294 CAAAGCGCCACTGCAATGAC 61.005 55.000 2.29 0.00 37.32 3.06
3070 3100 1.454572 AAAGCGCCACTGCAATGACA 61.455 50.000 2.29 0.00 37.32 3.58
3071 3101 1.246056 AAGCGCCACTGCAATGACAT 61.246 50.000 2.29 0.00 37.32 3.06
3072 3102 1.213537 GCGCCACTGCAATGACATT 59.786 52.632 0.00 0.00 37.32 2.71
3073 3103 0.799534 GCGCCACTGCAATGACATTC 60.800 55.000 0.00 0.00 37.32 2.67
3074 3104 0.522626 CGCCACTGCAATGACATTCA 59.477 50.000 0.00 0.00 37.32 2.57
3075 3105 1.068402 CGCCACTGCAATGACATTCAA 60.068 47.619 0.00 0.00 37.32 2.69
3076 3106 2.416296 CGCCACTGCAATGACATTCAAT 60.416 45.455 0.00 0.00 37.32 2.57
3077 3107 3.592059 GCCACTGCAATGACATTCAATT 58.408 40.909 0.00 0.00 37.47 2.32
3078 3108 3.998341 GCCACTGCAATGACATTCAATTT 59.002 39.130 0.00 0.00 37.47 1.82
3079 3109 4.453136 GCCACTGCAATGACATTCAATTTT 59.547 37.500 0.00 0.00 37.47 1.82
3080 3110 5.390145 GCCACTGCAATGACATTCAATTTTC 60.390 40.000 0.00 0.00 37.47 2.29
3081 3111 5.697178 CCACTGCAATGACATTCAATTTTCA 59.303 36.000 0.00 0.00 0.00 2.69
3082 3112 6.203145 CCACTGCAATGACATTCAATTTTCAA 59.797 34.615 0.00 0.00 0.00 2.69
3083 3113 7.254829 CCACTGCAATGACATTCAATTTTCAAA 60.255 33.333 0.00 0.00 0.00 2.69
3084 3114 8.286800 CACTGCAATGACATTCAATTTTCAAAT 58.713 29.630 0.00 0.00 0.00 2.32
3085 3115 8.842280 ACTGCAATGACATTCAATTTTCAAATT 58.158 25.926 0.00 0.00 39.07 1.82
3109 3139 8.893219 TTACATTACAAAAACATCAATTGCCA 57.107 26.923 0.00 0.00 0.00 4.92
3110 3140 7.798596 ACATTACAAAAACATCAATTGCCAA 57.201 28.000 0.00 0.00 0.00 4.52
3111 3141 8.218338 ACATTACAAAAACATCAATTGCCAAA 57.782 26.923 0.00 0.00 0.00 3.28
3112 3142 8.344098 ACATTACAAAAACATCAATTGCCAAAG 58.656 29.630 0.00 0.00 0.00 2.77
3113 3143 7.856145 TTACAAAAACATCAATTGCCAAAGT 57.144 28.000 0.00 0.00 0.00 2.66
3114 3144 8.948631 TTACAAAAACATCAATTGCCAAAGTA 57.051 26.923 0.00 0.00 0.00 2.24
3115 3145 7.245419 ACAAAAACATCAATTGCCAAAGTAC 57.755 32.000 0.00 0.00 0.00 2.73
3116 3146 6.259829 ACAAAAACATCAATTGCCAAAGTACC 59.740 34.615 0.00 0.00 0.00 3.34
3117 3147 5.543507 AAACATCAATTGCCAAAGTACCA 57.456 34.783 0.00 0.00 0.00 3.25
3118 3148 5.543507 AACATCAATTGCCAAAGTACCAA 57.456 34.783 0.00 0.00 0.00 3.67
3119 3149 5.743636 ACATCAATTGCCAAAGTACCAAT 57.256 34.783 0.00 0.00 0.00 3.16
3120 3150 5.481105 ACATCAATTGCCAAAGTACCAATG 58.519 37.500 0.00 0.00 30.26 2.82
3121 3151 3.924144 TCAATTGCCAAAGTACCAATGC 58.076 40.909 0.00 0.00 30.26 3.56
3122 3152 3.323115 TCAATTGCCAAAGTACCAATGCA 59.677 39.130 0.00 0.00 30.26 3.96
3123 3153 4.063689 CAATTGCCAAAGTACCAATGCAA 58.936 39.130 11.36 11.36 42.19 4.08
3124 3154 3.827008 TTGCCAAAGTACCAATGCAAA 57.173 38.095 7.70 0.00 35.94 3.68
3125 3155 3.827008 TGCCAAAGTACCAATGCAAAA 57.173 38.095 0.00 0.00 0.00 2.44
3126 3156 4.142609 TGCCAAAGTACCAATGCAAAAA 57.857 36.364 0.00 0.00 0.00 1.94
3127 3157 4.712476 TGCCAAAGTACCAATGCAAAAAT 58.288 34.783 0.00 0.00 0.00 1.82
3128 3158 4.514441 TGCCAAAGTACCAATGCAAAAATG 59.486 37.500 0.00 0.00 0.00 2.32
3129 3159 4.514816 GCCAAAGTACCAATGCAAAAATGT 59.485 37.500 0.00 0.00 0.00 2.71
3130 3160 5.560567 GCCAAAGTACCAATGCAAAAATGTG 60.561 40.000 0.00 0.00 0.00 3.21
3131 3161 5.049543 CCAAAGTACCAATGCAAAAATGTGG 60.050 40.000 0.00 0.00 35.39 4.17
3132 3162 3.663025 AGTACCAATGCAAAAATGTGGC 58.337 40.909 0.00 0.00 32.27 5.01
3133 3163 2.634815 ACCAATGCAAAAATGTGGCA 57.365 40.000 0.00 0.00 42.43 4.92
3134 3164 2.928334 ACCAATGCAAAAATGTGGCAA 58.072 38.095 0.00 0.00 41.43 4.52
3135 3165 3.488363 ACCAATGCAAAAATGTGGCAAT 58.512 36.364 0.00 0.00 41.43 3.56
3136 3166 3.890147 ACCAATGCAAAAATGTGGCAATT 59.110 34.783 0.00 0.00 41.43 2.32
3137 3167 5.068636 ACCAATGCAAAAATGTGGCAATTA 58.931 33.333 0.00 0.00 41.43 1.40
3138 3168 5.711036 ACCAATGCAAAAATGTGGCAATTAT 59.289 32.000 0.00 0.00 41.43 1.28
3139 3169 6.030849 CCAATGCAAAAATGTGGCAATTATG 58.969 36.000 0.00 0.00 41.43 1.90
3140 3170 6.127980 CCAATGCAAAAATGTGGCAATTATGA 60.128 34.615 0.00 0.00 41.43 2.15
3141 3171 7.306213 CAATGCAAAAATGTGGCAATTATGAA 58.694 30.769 0.00 0.00 41.43 2.57
3142 3172 6.872628 TGCAAAAATGTGGCAATTATGAAA 57.127 29.167 0.00 0.00 34.05 2.69
3143 3173 6.900189 TGCAAAAATGTGGCAATTATGAAAG 58.100 32.000 0.00 0.00 34.05 2.62
3144 3174 6.485984 TGCAAAAATGTGGCAATTATGAAAGT 59.514 30.769 0.00 0.00 34.05 2.66
3145 3175 6.797995 GCAAAAATGTGGCAATTATGAAAGTG 59.202 34.615 0.00 0.00 33.85 3.16
3164 3194 1.818850 GCAATAGCTGCGAACATGTG 58.181 50.000 0.00 0.00 42.37 3.21
3165 3195 1.131126 GCAATAGCTGCGAACATGTGT 59.869 47.619 0.00 0.00 42.37 3.72
3166 3196 2.351418 GCAATAGCTGCGAACATGTGTA 59.649 45.455 0.00 0.00 42.37 2.90
3167 3197 3.544834 GCAATAGCTGCGAACATGTGTAG 60.545 47.826 0.00 0.00 42.37 2.74
3168 3198 3.801114 ATAGCTGCGAACATGTGTAGA 57.199 42.857 0.00 0.00 0.00 2.59
3169 3199 2.455674 AGCTGCGAACATGTGTAGAA 57.544 45.000 0.00 0.00 0.00 2.10
3170 3200 2.341257 AGCTGCGAACATGTGTAGAAG 58.659 47.619 0.00 0.00 0.00 2.85
3171 3201 1.394917 GCTGCGAACATGTGTAGAAGG 59.605 52.381 0.00 0.00 0.00 3.46
3172 3202 2.688507 CTGCGAACATGTGTAGAAGGT 58.311 47.619 0.00 0.00 0.00 3.50
3173 3203 3.067106 CTGCGAACATGTGTAGAAGGTT 58.933 45.455 0.00 0.00 0.00 3.50
3174 3204 4.242475 CTGCGAACATGTGTAGAAGGTTA 58.758 43.478 0.00 0.00 0.00 2.85
3175 3205 4.633175 TGCGAACATGTGTAGAAGGTTAA 58.367 39.130 0.00 0.00 0.00 2.01
3176 3206 5.242434 TGCGAACATGTGTAGAAGGTTAAT 58.758 37.500 0.00 0.00 0.00 1.40
3177 3207 5.703592 TGCGAACATGTGTAGAAGGTTAATT 59.296 36.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 2.637382 TCAAATATGGCGGCTATCCTGA 59.363 45.455 11.43 5.06 0.00 3.86
231 233 3.992943 TGACCCAACCGAAATCTATGT 57.007 42.857 0.00 0.00 0.00 2.29
336 338 7.490657 TTTAAACTCTCAAGAGGCCTATGTA 57.509 36.000 4.42 0.62 46.13 2.29
381 383 2.623915 GCAGTGGCTCAAGCAGTGG 61.624 63.158 4.13 0.00 44.36 4.00
382 384 2.952245 GCAGTGGCTCAAGCAGTG 59.048 61.111 4.13 4.95 44.36 3.66
453 455 3.257375 GGACCGGCTTTGGAGTAAAATTT 59.743 43.478 0.00 0.00 0.00 1.82
509 512 1.681780 GGGAATGCCTTCGGACATTGA 60.682 52.381 0.00 0.00 36.65 2.57
556 562 2.202046 GTCATGCACGACAACGCG 60.202 61.111 8.27 3.53 43.96 6.01
589 596 1.202651 CCTCCAAAGTTCGTGGACTGT 60.203 52.381 0.00 0.00 40.33 3.55
598 605 4.400529 TTTCAAAAGGCCTCCAAAGTTC 57.599 40.909 5.23 0.00 0.00 3.01
664 671 1.093496 GGTTCGGCCCGTGATTTAGG 61.093 60.000 1.63 0.00 0.00 2.69
693 700 1.859998 GCGAAACGAGCTTGCTTTTGT 60.860 47.619 0.00 0.00 0.00 2.83
720 727 1.600413 CGAGCTCGCTTTTGCCTTTTT 60.600 47.619 25.07 0.00 43.93 1.94
721 728 0.040067 CGAGCTCGCTTTTGCCTTTT 60.040 50.000 25.07 0.00 43.93 2.27
722 729 1.166531 ACGAGCTCGCTTTTGCCTTT 61.167 50.000 34.83 9.46 44.43 3.11
723 730 1.598130 ACGAGCTCGCTTTTGCCTT 60.598 52.632 34.83 10.26 44.43 4.35
724 731 2.031163 ACGAGCTCGCTTTTGCCT 59.969 55.556 34.83 11.05 44.43 4.75
725 732 1.841663 TTCACGAGCTCGCTTTTGCC 61.842 55.000 34.83 0.00 44.43 4.52
726 733 0.041312 TTTCACGAGCTCGCTTTTGC 60.041 50.000 34.83 0.00 44.43 3.68
727 734 2.032894 TCTTTTCACGAGCTCGCTTTTG 60.033 45.455 34.83 24.68 44.43 2.44
728 735 2.210116 TCTTTTCACGAGCTCGCTTTT 58.790 42.857 34.83 13.89 44.43 2.27
729 736 1.795286 CTCTTTTCACGAGCTCGCTTT 59.205 47.619 34.83 14.30 44.43 3.51
730 737 1.000163 TCTCTTTTCACGAGCTCGCTT 60.000 47.619 34.83 15.12 44.43 4.68
731 738 0.598562 TCTCTTTTCACGAGCTCGCT 59.401 50.000 34.83 19.51 44.43 4.93
732 739 1.419374 TTCTCTTTTCACGAGCTCGC 58.581 50.000 34.83 0.00 44.43 5.03
733 740 3.309388 TCTTTCTCTTTTCACGAGCTCG 58.691 45.455 33.45 33.45 46.33 5.03
734 741 4.031201 CGATCTTTCTCTTTTCACGAGCTC 59.969 45.833 2.73 2.73 0.00 4.09
735 742 3.923461 CGATCTTTCTCTTTTCACGAGCT 59.077 43.478 0.00 0.00 0.00 4.09
736 743 3.921021 TCGATCTTTCTCTTTTCACGAGC 59.079 43.478 0.00 0.00 0.00 5.03
737 744 5.859114 TCTTCGATCTTTCTCTTTTCACGAG 59.141 40.000 0.00 0.00 0.00 4.18
738 745 5.769367 TCTTCGATCTTTCTCTTTTCACGA 58.231 37.500 0.00 0.00 0.00 4.35
739 746 5.061560 CCTCTTCGATCTTTCTCTTTTCACG 59.938 44.000 0.00 0.00 0.00 4.35
740 747 5.163903 GCCTCTTCGATCTTTCTCTTTTCAC 60.164 44.000 0.00 0.00 0.00 3.18
741 748 4.932200 GCCTCTTCGATCTTTCTCTTTTCA 59.068 41.667 0.00 0.00 0.00 2.69
742 749 4.932200 TGCCTCTTCGATCTTTCTCTTTTC 59.068 41.667 0.00 0.00 0.00 2.29
743 750 4.693095 GTGCCTCTTCGATCTTTCTCTTTT 59.307 41.667 0.00 0.00 0.00 2.27
744 751 4.249661 GTGCCTCTTCGATCTTTCTCTTT 58.750 43.478 0.00 0.00 0.00 2.52
745 752 3.368948 GGTGCCTCTTCGATCTTTCTCTT 60.369 47.826 0.00 0.00 0.00 2.85
746 753 2.167487 GGTGCCTCTTCGATCTTTCTCT 59.833 50.000 0.00 0.00 0.00 3.10
747 754 2.545731 GGTGCCTCTTCGATCTTTCTC 58.454 52.381 0.00 0.00 0.00 2.87
748 755 1.208293 GGGTGCCTCTTCGATCTTTCT 59.792 52.381 0.00 0.00 0.00 2.52
818 825 2.375766 CGCCACTGCAGTCGTTCTC 61.376 63.158 18.64 0.00 37.32 2.87
819 826 2.356313 CGCCACTGCAGTCGTTCT 60.356 61.111 18.64 0.00 37.32 3.01
820 827 3.414700 CCGCCACTGCAGTCGTTC 61.415 66.667 18.64 5.27 37.32 3.95
875 882 0.108329 CTTCCTTTCGCCTCGCCTTA 60.108 55.000 0.00 0.00 0.00 2.69
906 913 4.344865 GTCCTCCTTTGGCGGGCA 62.345 66.667 0.00 0.00 0.00 5.36
988 1005 2.608261 GGAACTCACTGTCTTCCGTCTG 60.608 54.545 0.00 0.00 0.00 3.51
991 1008 0.680061 GGGAACTCACTGTCTTCCGT 59.320 55.000 0.00 0.00 32.77 4.69
1007 1024 0.893727 GGAAAAAGGCGCAAGAGGGA 60.894 55.000 10.83 0.00 43.02 4.20
1016 1038 1.532604 GGGGGAACTGGAAAAAGGCG 61.533 60.000 0.00 0.00 0.00 5.52
1020 1042 0.848053 AGACGGGGGAACTGGAAAAA 59.152 50.000 0.00 0.00 0.00 1.94
1025 1047 1.217244 CGTAAGACGGGGGAACTGG 59.783 63.158 0.00 0.00 38.08 4.00
1033 1055 4.271776 ACTGAAAGAAAAACGTAAGACGGG 59.728 41.667 3.82 0.00 41.72 5.28
1035 1057 6.245724 ACAACTGAAAGAAAAACGTAAGACG 58.754 36.000 0.00 0.00 42.71 4.18
1050 1072 6.095720 ACCTATTTTGGAACGAACAACTGAAA 59.904 34.615 0.00 0.00 0.00 2.69
1053 1075 5.212194 CACCTATTTTGGAACGAACAACTG 58.788 41.667 0.00 0.00 0.00 3.16
1054 1076 4.261447 GCACCTATTTTGGAACGAACAACT 60.261 41.667 0.00 0.00 0.00 3.16
1062 1084 1.132453 GCTCGGCACCTATTTTGGAAC 59.868 52.381 0.00 0.00 0.00 3.62
1067 1089 1.739067 GTGAGCTCGGCACCTATTTT 58.261 50.000 9.64 0.00 0.00 1.82
1077 1099 4.124851 AGTACAATTTAGGTGAGCTCGG 57.875 45.455 9.64 0.00 0.00 4.63
1131 1161 2.995939 CTCGCTTGCTCACTGAATGTAA 59.004 45.455 0.00 0.00 0.00 2.41
1132 1162 2.610433 CTCGCTTGCTCACTGAATGTA 58.390 47.619 0.00 0.00 0.00 2.29
1133 1163 1.436600 CTCGCTTGCTCACTGAATGT 58.563 50.000 0.00 0.00 0.00 2.71
1152 1182 2.125512 CAGACCAGTAGTGCGGCC 60.126 66.667 0.00 0.00 0.00 6.13
1185 1215 0.607489 AGCAATGCAGAGTCCACCAC 60.607 55.000 8.35 0.00 0.00 4.16
1193 1223 2.551032 TGTGAACTCAAGCAATGCAGAG 59.449 45.455 20.77 20.77 38.36 3.35
1201 1231 4.743151 CGTAGTTTACTGTGAACTCAAGCA 59.257 41.667 19.53 1.51 38.28 3.91
1212 1242 4.062677 TGGTTTGCTCGTAGTTTACTGT 57.937 40.909 0.00 0.00 0.00 3.55
1213 1243 4.610680 GCTTGGTTTGCTCGTAGTTTACTG 60.611 45.833 0.00 0.00 0.00 2.74
1218 1248 1.602377 GTGCTTGGTTTGCTCGTAGTT 59.398 47.619 0.00 0.00 0.00 2.24
1231 1261 1.718757 GCCGATGGCTAAGTGCTTGG 61.719 60.000 0.00 0.00 46.69 3.61
1370 1400 2.094338 CCTGACAGTAGTTACGGGTTCC 60.094 54.545 0.93 0.00 0.00 3.62
1378 1408 4.966168 TGAATATGGCCCTGACAGTAGTTA 59.034 41.667 0.00 0.00 0.00 2.24
1393 1423 4.262292 CCATCACATTGGCCTTGAATATGG 60.262 45.833 3.32 12.81 0.00 2.74
1439 1469 2.544685 ACTGATGACGTTGCTGCTATC 58.455 47.619 0.00 0.00 0.00 2.08
1457 1487 6.367969 CGTCCTTGCTACTATACACAAAAACT 59.632 38.462 0.00 0.00 0.00 2.66
1588 1618 2.125269 CGGGGATTGGGTCGTCAC 60.125 66.667 0.00 0.00 0.00 3.67
1593 1623 4.041762 TGGCACGGGGATTGGGTC 62.042 66.667 0.00 0.00 0.00 4.46
1627 1657 6.767902 TCCATTGATTAGGCTGTTAAGATGAC 59.232 38.462 0.00 0.00 0.00 3.06
1634 1664 5.827797 GTCCATTCCATTGATTAGGCTGTTA 59.172 40.000 0.00 0.00 0.00 2.41
1647 1677 1.410083 CCCGTCCATGTCCATTCCATT 60.410 52.381 0.00 0.00 0.00 3.16
1794 1824 0.802607 GGCTCGATGTCGTCCAAGAC 60.803 60.000 2.04 0.00 41.30 3.01
1820 1850 8.185003 ACATGAACTTAAGCAAAACTTTGAAC 57.815 30.769 0.00 0.00 40.55 3.18
1878 1908 4.162690 AATCGGTGGAGAGCGCCC 62.163 66.667 2.29 0.00 42.92 6.13
1879 1909 2.892425 CAATCGGTGGAGAGCGCC 60.892 66.667 2.29 0.00 42.92 6.53
1892 1922 4.569966 AGCAGATGATGAAACGTCTCAATC 59.430 41.667 0.00 0.00 34.42 2.67
1900 1930 1.530441 CGGCAAGCAGATGATGAAACG 60.530 52.381 0.00 0.00 0.00 3.60
1997 2027 5.355071 TGCCAAATCTAGAGTAGTTGCAATG 59.645 40.000 0.59 0.00 0.00 2.82
2065 2095 7.174772 TGTTGAAATCTTTGTCAGCTGCTAATA 59.825 33.333 9.47 1.31 0.00 0.98
2066 2096 6.016024 TGTTGAAATCTTTGTCAGCTGCTAAT 60.016 34.615 9.47 0.00 0.00 1.73
2072 2102 4.646492 ACCTTGTTGAAATCTTTGTCAGCT 59.354 37.500 0.00 0.00 0.00 4.24
2076 2106 6.099341 ACACAACCTTGTTGAAATCTTTGTC 58.901 36.000 13.46 0.00 39.91 3.18
2129 2159 2.267426 GCAATAAGCGCCGGAAATTTT 58.733 42.857 5.05 0.00 0.00 1.82
2158 2188 2.501723 TGTTATGCCTCAACCCTCTCTC 59.498 50.000 0.00 0.00 0.00 3.20
2182 2212 6.258727 TCGATGTCTAGGCATGAAAAATTCTC 59.741 38.462 16.10 0.00 0.00 2.87
2190 2220 4.645136 AGTACTTCGATGTCTAGGCATGAA 59.355 41.667 16.10 16.20 0.00 2.57
2206 2236 4.703575 GGTTTTCCCCCATACAAGTACTTC 59.296 45.833 4.77 0.00 0.00 3.01
2213 2243 7.227355 TCATATAAGGTTTTCCCCCATACAA 57.773 36.000 0.00 0.00 41.86 2.41
2398 2428 7.116075 TGCACTAGGTAATTGTACAATTCCAT 58.884 34.615 31.71 22.78 40.99 3.41
2517 2547 3.242739 ACGAACTTTGTCAGTTGATGCAC 60.243 43.478 0.00 0.00 46.53 4.57
2526 2556 3.328382 TGGGGATACGAACTTTGTCAG 57.672 47.619 0.00 0.00 37.60 3.51
2530 2560 5.186198 AGAGAAATGGGGATACGAACTTTG 58.814 41.667 0.00 0.00 37.60 2.77
2537 2567 9.555727 TCTTTTTAATAGAGAAATGGGGATACG 57.444 33.333 0.00 0.00 37.60 3.06
2568 2598 6.994221 ACCTAATGATACCATACAGTACTGC 58.006 40.000 22.90 4.43 31.59 4.40
2596 2626 9.034800 GGAAAAGGATCAGAGTCAGAGATATAT 57.965 37.037 0.00 0.00 0.00 0.86
2597 2627 8.231007 AGGAAAAGGATCAGAGTCAGAGATATA 58.769 37.037 0.00 0.00 0.00 0.86
2598 2628 7.015487 CAGGAAAAGGATCAGAGTCAGAGATAT 59.985 40.741 0.00 0.00 0.00 1.63
2599 2629 6.323482 CAGGAAAAGGATCAGAGTCAGAGATA 59.677 42.308 0.00 0.00 0.00 1.98
2600 2630 5.129155 CAGGAAAAGGATCAGAGTCAGAGAT 59.871 44.000 0.00 0.00 0.00 2.75
2601 2631 4.465660 CAGGAAAAGGATCAGAGTCAGAGA 59.534 45.833 0.00 0.00 0.00 3.10
2602 2632 4.465660 TCAGGAAAAGGATCAGAGTCAGAG 59.534 45.833 0.00 0.00 0.00 3.35
2603 2633 4.420206 TCAGGAAAAGGATCAGAGTCAGA 58.580 43.478 0.00 0.00 0.00 3.27
2604 2634 4.815533 TCAGGAAAAGGATCAGAGTCAG 57.184 45.455 0.00 0.00 0.00 3.51
2605 2635 4.779489 TCATCAGGAAAAGGATCAGAGTCA 59.221 41.667 0.00 0.00 0.00 3.41
2606 2636 5.104982 ACTCATCAGGAAAAGGATCAGAGTC 60.105 44.000 0.00 0.00 26.93 3.36
2607 2637 4.782156 ACTCATCAGGAAAAGGATCAGAGT 59.218 41.667 0.00 0.00 0.00 3.24
2608 2638 5.356291 ACTCATCAGGAAAAGGATCAGAG 57.644 43.478 0.00 0.00 0.00 3.35
2609 2639 5.486775 AGAACTCATCAGGAAAAGGATCAGA 59.513 40.000 0.00 0.00 0.00 3.27
2610 2640 5.585445 CAGAACTCATCAGGAAAAGGATCAG 59.415 44.000 0.00 0.00 0.00 2.90
2611 2641 5.494724 CAGAACTCATCAGGAAAAGGATCA 58.505 41.667 0.00 0.00 0.00 2.92
2612 2642 4.880696 CCAGAACTCATCAGGAAAAGGATC 59.119 45.833 0.00 0.00 36.86 3.36
2613 2643 4.324874 CCCAGAACTCATCAGGAAAAGGAT 60.325 45.833 0.00 0.00 36.86 3.24
2614 2644 3.009473 CCCAGAACTCATCAGGAAAAGGA 59.991 47.826 0.00 0.00 36.86 3.36
2615 2645 3.245052 ACCCAGAACTCATCAGGAAAAGG 60.245 47.826 0.00 0.00 36.86 3.11
2616 2646 4.026356 ACCCAGAACTCATCAGGAAAAG 57.974 45.455 0.00 0.00 36.86 2.27
2617 2647 4.597507 ACTACCCAGAACTCATCAGGAAAA 59.402 41.667 0.00 0.00 36.86 2.29
2618 2648 4.168101 ACTACCCAGAACTCATCAGGAAA 58.832 43.478 0.00 0.00 36.86 3.13
2619 2649 3.791320 ACTACCCAGAACTCATCAGGAA 58.209 45.455 0.00 0.00 36.86 3.36
2620 2650 3.474798 ACTACCCAGAACTCATCAGGA 57.525 47.619 0.00 0.00 36.86 3.86
2621 2651 5.878406 AATACTACCCAGAACTCATCAGG 57.122 43.478 0.00 0.00 34.56 3.86
2622 2652 6.926272 GCTAAATACTACCCAGAACTCATCAG 59.074 42.308 0.00 0.00 0.00 2.90
2623 2653 6.382859 TGCTAAATACTACCCAGAACTCATCA 59.617 38.462 0.00 0.00 0.00 3.07
2624 2654 6.817184 TGCTAAATACTACCCAGAACTCATC 58.183 40.000 0.00 0.00 0.00 2.92
2625 2655 6.808321 TGCTAAATACTACCCAGAACTCAT 57.192 37.500 0.00 0.00 0.00 2.90
2626 2656 6.439375 TCTTGCTAAATACTACCCAGAACTCA 59.561 38.462 0.00 0.00 0.00 3.41
2627 2657 6.875076 TCTTGCTAAATACTACCCAGAACTC 58.125 40.000 0.00 0.00 0.00 3.01
2628 2658 6.869206 TCTTGCTAAATACTACCCAGAACT 57.131 37.500 0.00 0.00 0.00 3.01
2629 2659 9.609346 TTTATCTTGCTAAATACTACCCAGAAC 57.391 33.333 0.00 0.00 0.00 3.01
2684 2714 9.979578 TGATGTTATGTTTTTAGCATTTCAGTT 57.020 25.926 0.00 0.00 0.00 3.16
2685 2715 9.630098 CTGATGTTATGTTTTTAGCATTTCAGT 57.370 29.630 0.00 0.00 0.00 3.41
2686 2716 9.844790 TCTGATGTTATGTTTTTAGCATTTCAG 57.155 29.630 0.00 0.00 0.00 3.02
2700 2730 9.807649 GCCATTCTTAAAAATCTGATGTTATGT 57.192 29.630 0.00 0.00 0.00 2.29
2701 2731 9.806203 TGCCATTCTTAAAAATCTGATGTTATG 57.194 29.630 0.00 0.00 0.00 1.90
2704 2734 9.729281 ATTTGCCATTCTTAAAAATCTGATGTT 57.271 25.926 0.00 0.00 0.00 2.71
2705 2735 9.374838 GATTTGCCATTCTTAAAAATCTGATGT 57.625 29.630 0.00 0.00 35.39 3.06
2706 2736 8.537223 CGATTTGCCATTCTTAAAAATCTGATG 58.463 33.333 0.00 0.00 35.87 3.07
2707 2737 8.469200 TCGATTTGCCATTCTTAAAAATCTGAT 58.531 29.630 0.00 0.00 35.87 2.90
2708 2738 7.825681 TCGATTTGCCATTCTTAAAAATCTGA 58.174 30.769 0.00 0.00 35.87 3.27
2709 2739 8.375465 GTTCGATTTGCCATTCTTAAAAATCTG 58.625 33.333 0.00 0.00 35.87 2.90
2710 2740 8.306761 AGTTCGATTTGCCATTCTTAAAAATCT 58.693 29.630 0.00 0.00 35.87 2.40
2711 2741 8.466086 AGTTCGATTTGCCATTCTTAAAAATC 57.534 30.769 0.00 0.00 35.08 2.17
2712 2742 8.831715 AAGTTCGATTTGCCATTCTTAAAAAT 57.168 26.923 0.00 0.00 0.00 1.82
2713 2743 8.655651 AAAGTTCGATTTGCCATTCTTAAAAA 57.344 26.923 0.00 0.00 0.00 1.94
2714 2744 8.655651 AAAAGTTCGATTTGCCATTCTTAAAA 57.344 26.923 0.00 0.00 0.00 1.52
2715 2745 8.655651 AAAAAGTTCGATTTGCCATTCTTAAA 57.344 26.923 0.00 0.00 0.00 1.52
2737 2767 5.973651 TGACACGCAATTTGCAATAAAAA 57.026 30.435 20.56 0.00 45.36 1.94
2738 2768 5.107182 CCATGACACGCAATTTGCAATAAAA 60.107 36.000 20.56 2.64 45.36 1.52
2739 2769 4.388165 CCATGACACGCAATTTGCAATAAA 59.612 37.500 20.56 4.15 45.36 1.40
2740 2770 3.925299 CCATGACACGCAATTTGCAATAA 59.075 39.130 20.56 3.13 45.36 1.40
2741 2771 3.509740 CCATGACACGCAATTTGCAATA 58.490 40.909 20.56 3.22 45.36 1.90
2742 2772 2.339418 CCATGACACGCAATTTGCAAT 58.661 42.857 20.56 5.80 45.36 3.56
2743 2773 1.604947 CCCATGACACGCAATTTGCAA 60.605 47.619 20.56 0.00 45.36 4.08
2744 2774 0.038435 CCCATGACACGCAATTTGCA 60.038 50.000 20.56 1.59 45.36 4.08
2745 2775 1.353609 GCCCATGACACGCAATTTGC 61.354 55.000 11.42 11.42 40.69 3.68
2746 2776 0.038435 TGCCCATGACACGCAATTTG 60.038 50.000 0.00 0.00 0.00 2.32
2747 2777 0.896923 ATGCCCATGACACGCAATTT 59.103 45.000 0.00 0.00 35.85 1.82
2748 2778 0.173935 CATGCCCATGACACGCAATT 59.826 50.000 2.09 0.00 41.20 2.32
2749 2779 1.669049 CCATGCCCATGACACGCAAT 61.669 55.000 9.73 0.00 41.20 3.56
2750 2780 2.341875 CCATGCCCATGACACGCAA 61.342 57.895 9.73 0.00 41.20 4.85
2751 2781 2.751036 CCATGCCCATGACACGCA 60.751 61.111 9.73 0.00 41.20 5.24
2752 2782 4.197498 GCCATGCCCATGACACGC 62.197 66.667 9.73 1.27 41.20 5.34
2753 2783 1.669049 ATTGCCATGCCCATGACACG 61.669 55.000 9.73 0.00 41.20 4.49
2754 2784 0.538118 AATTGCCATGCCCATGACAC 59.462 50.000 9.73 0.44 41.20 3.67
2755 2785 0.825410 GAATTGCCATGCCCATGACA 59.175 50.000 9.73 1.46 41.20 3.58
2756 2786 0.249155 CGAATTGCCATGCCCATGAC 60.249 55.000 9.73 0.00 41.20 3.06
2757 2787 2.018727 GCGAATTGCCATGCCCATGA 62.019 55.000 9.73 0.00 41.20 3.07
2758 2788 1.593209 GCGAATTGCCATGCCCATG 60.593 57.895 1.28 1.28 37.76 3.66
2759 2789 2.816718 GCGAATTGCCATGCCCAT 59.183 55.556 0.00 0.00 37.76 4.00
2776 2806 3.118884 AGGATTTGCCATGCTTGCTAAAG 60.119 43.478 0.00 0.00 40.02 1.85
2777 2807 2.833338 AGGATTTGCCATGCTTGCTAAA 59.167 40.909 0.00 0.00 40.02 1.85
2778 2808 2.166870 CAGGATTTGCCATGCTTGCTAA 59.833 45.455 0.00 0.00 40.02 3.09
2779 2809 1.752498 CAGGATTTGCCATGCTTGCTA 59.248 47.619 0.00 0.00 40.02 3.49
2780 2810 0.535335 CAGGATTTGCCATGCTTGCT 59.465 50.000 0.00 0.00 40.02 3.91
2781 2811 0.533491 TCAGGATTTGCCATGCTTGC 59.467 50.000 0.00 0.00 40.02 4.01
2782 2812 1.546923 TGTCAGGATTTGCCATGCTTG 59.453 47.619 0.00 0.00 40.02 4.01
2783 2813 1.927487 TGTCAGGATTTGCCATGCTT 58.073 45.000 0.00 0.00 40.02 3.91
2784 2814 1.927487 TTGTCAGGATTTGCCATGCT 58.073 45.000 0.00 0.00 40.02 3.79
2785 2815 2.747396 TTTGTCAGGATTTGCCATGC 57.253 45.000 0.00 0.00 40.02 4.06
2803 2833 5.796424 AATCCTGTCATGTTCAGCTTTTT 57.204 34.783 12.64 3.97 0.00 1.94
2804 2834 5.535333 CAAATCCTGTCATGTTCAGCTTTT 58.465 37.500 12.64 11.20 0.00 2.27
2805 2835 4.560108 GCAAATCCTGTCATGTTCAGCTTT 60.560 41.667 12.64 11.33 0.00 3.51
2806 2836 3.057033 GCAAATCCTGTCATGTTCAGCTT 60.057 43.478 12.64 7.52 0.00 3.74
2807 2837 2.490903 GCAAATCCTGTCATGTTCAGCT 59.509 45.455 12.64 0.00 0.00 4.24
2808 2838 2.416431 GGCAAATCCTGTCATGTTCAGC 60.416 50.000 12.64 4.42 0.00 4.26
2809 2839 2.159476 CGGCAAATCCTGTCATGTTCAG 60.159 50.000 11.62 11.62 0.00 3.02
2810 2840 1.811965 CGGCAAATCCTGTCATGTTCA 59.188 47.619 0.00 0.00 0.00 3.18
2811 2841 1.812571 ACGGCAAATCCTGTCATGTTC 59.187 47.619 0.00 0.00 0.00 3.18
2812 2842 1.541147 CACGGCAAATCCTGTCATGTT 59.459 47.619 0.00 0.00 0.00 2.71
2813 2843 1.167851 CACGGCAAATCCTGTCATGT 58.832 50.000 0.00 0.00 0.00 3.21
2814 2844 0.179156 GCACGGCAAATCCTGTCATG 60.179 55.000 0.00 0.00 0.00 3.07
2815 2845 0.322816 AGCACGGCAAATCCTGTCAT 60.323 50.000 0.00 0.00 0.00 3.06
2816 2846 0.537143 AAGCACGGCAAATCCTGTCA 60.537 50.000 0.00 0.00 0.00 3.58
2817 2847 0.109597 CAAGCACGGCAAATCCTGTC 60.110 55.000 0.00 0.00 0.00 3.51
2818 2848 1.959085 CAAGCACGGCAAATCCTGT 59.041 52.632 0.00 0.00 0.00 4.00
2819 2849 1.444895 GCAAGCACGGCAAATCCTG 60.445 57.895 0.00 0.00 0.00 3.86
2820 2850 2.639327 GGCAAGCACGGCAAATCCT 61.639 57.895 0.00 0.00 0.00 3.24
2821 2851 2.125952 GGCAAGCACGGCAAATCC 60.126 61.111 0.00 0.00 0.00 3.01
2822 2852 2.470801 TTCGGCAAGCACGGCAAATC 62.471 55.000 0.00 0.00 0.00 2.17
2823 2853 2.476534 CTTCGGCAAGCACGGCAAAT 62.477 55.000 0.00 0.00 0.00 2.32
2824 2854 3.192954 CTTCGGCAAGCACGGCAAA 62.193 57.895 0.00 0.00 0.00 3.68
2825 2855 3.659092 CTTCGGCAAGCACGGCAA 61.659 61.111 0.00 0.00 0.00 4.52
2828 2858 4.697756 TCCCTTCGGCAAGCACGG 62.698 66.667 0.00 0.00 0.00 4.94
2829 2859 1.586154 AATTCCCTTCGGCAAGCACG 61.586 55.000 0.00 0.00 0.00 5.34
2830 2860 1.132453 GTAATTCCCTTCGGCAAGCAC 59.868 52.381 0.00 0.00 0.00 4.40
2831 2861 1.459450 GTAATTCCCTTCGGCAAGCA 58.541 50.000 0.00 0.00 0.00 3.91
2832 2862 0.738975 GGTAATTCCCTTCGGCAAGC 59.261 55.000 0.00 0.00 0.00 4.01
2833 2863 2.017049 CTGGTAATTCCCTTCGGCAAG 58.983 52.381 0.00 0.00 34.77 4.01
2834 2864 1.631388 TCTGGTAATTCCCTTCGGCAA 59.369 47.619 0.00 0.00 34.77 4.52
2835 2865 1.281419 TCTGGTAATTCCCTTCGGCA 58.719 50.000 0.00 0.00 34.77 5.69
2836 2866 2.640316 ATCTGGTAATTCCCTTCGGC 57.360 50.000 0.00 0.00 34.77 5.54
2837 2867 3.131396 CGAATCTGGTAATTCCCTTCGG 58.869 50.000 3.01 0.00 37.65 4.30
2838 2868 2.544267 GCGAATCTGGTAATTCCCTTCG 59.456 50.000 5.80 5.80 40.84 3.79
2839 2869 2.544267 CGCGAATCTGGTAATTCCCTTC 59.456 50.000 0.00 0.00 32.99 3.46
2840 2870 2.561569 CGCGAATCTGGTAATTCCCTT 58.438 47.619 0.00 0.00 32.99 3.95
2841 2871 1.202651 CCGCGAATCTGGTAATTCCCT 60.203 52.381 8.23 0.00 32.99 4.20
2842 2872 1.226746 CCGCGAATCTGGTAATTCCC 58.773 55.000 8.23 0.00 32.99 3.97
2843 2873 0.586802 GCCGCGAATCTGGTAATTCC 59.413 55.000 8.23 0.00 32.99 3.01
2844 2874 1.003866 GTGCCGCGAATCTGGTAATTC 60.004 52.381 8.23 0.00 33.22 2.17
2845 2875 1.014352 GTGCCGCGAATCTGGTAATT 58.986 50.000 8.23 0.00 0.00 1.40
2846 2876 0.107897 TGTGCCGCGAATCTGGTAAT 60.108 50.000 8.23 0.00 0.00 1.89
2847 2877 0.107897 ATGTGCCGCGAATCTGGTAA 60.108 50.000 8.23 0.00 0.00 2.85
2848 2878 0.747852 TATGTGCCGCGAATCTGGTA 59.252 50.000 8.23 0.00 0.00 3.25
2849 2879 0.107897 TTATGTGCCGCGAATCTGGT 60.108 50.000 8.23 0.00 0.00 4.00
2850 2880 1.229428 ATTATGTGCCGCGAATCTGG 58.771 50.000 8.23 0.00 0.00 3.86
2851 2881 3.038017 CAAATTATGTGCCGCGAATCTG 58.962 45.455 8.23 0.00 0.00 2.90
2852 2882 2.541588 GCAAATTATGTGCCGCGAATCT 60.542 45.455 8.23 0.00 35.91 2.40
2853 2883 1.780860 GCAAATTATGTGCCGCGAATC 59.219 47.619 8.23 0.00 35.91 2.52
2854 2884 1.838913 GCAAATTATGTGCCGCGAAT 58.161 45.000 8.23 0.00 35.91 3.34
2855 2885 3.320884 GCAAATTATGTGCCGCGAA 57.679 47.368 8.23 0.00 35.91 4.70
2861 2891 6.484818 ACATTTTTCTGGCAAATTATGTGC 57.515 33.333 0.00 0.00 41.45 4.57
2862 2892 8.557864 TCAAACATTTTTCTGGCAAATTATGTG 58.442 29.630 0.00 0.00 0.00 3.21
2863 2893 8.674263 TCAAACATTTTTCTGGCAAATTATGT 57.326 26.923 0.00 0.00 0.00 2.29
2866 2896 9.947669 CAAATCAAACATTTTTCTGGCAAATTA 57.052 25.926 0.00 0.00 0.00 1.40
2867 2897 7.435784 GCAAATCAAACATTTTTCTGGCAAATT 59.564 29.630 0.00 0.00 0.00 1.82
2868 2898 6.919115 GCAAATCAAACATTTTTCTGGCAAAT 59.081 30.769 0.00 0.00 0.00 2.32
2869 2899 6.264088 GCAAATCAAACATTTTTCTGGCAAA 58.736 32.000 0.00 0.00 0.00 3.68
2870 2900 5.221009 GGCAAATCAAACATTTTTCTGGCAA 60.221 36.000 0.00 0.00 0.00 4.52
2871 2901 4.275443 GGCAAATCAAACATTTTTCTGGCA 59.725 37.500 0.00 0.00 0.00 4.92
2872 2902 4.275443 TGGCAAATCAAACATTTTTCTGGC 59.725 37.500 0.00 0.00 0.00 4.85
2873 2903 6.016943 ACATGGCAAATCAAACATTTTTCTGG 60.017 34.615 0.00 0.00 0.00 3.86
2874 2904 6.961576 ACATGGCAAATCAAACATTTTTCTG 58.038 32.000 0.00 0.00 0.00 3.02
2875 2905 7.571080 AACATGGCAAATCAAACATTTTTCT 57.429 28.000 0.00 0.00 0.00 2.52
2876 2906 9.727627 TTAAACATGGCAAATCAAACATTTTTC 57.272 25.926 0.00 0.00 29.35 2.29
2879 2909 9.733219 CTTTTAAACATGGCAAATCAAACATTT 57.267 25.926 0.00 0.00 0.00 2.32
2880 2910 8.901793 ACTTTTAAACATGGCAAATCAAACATT 58.098 25.926 0.00 0.00 0.00 2.71
2881 2911 8.449251 ACTTTTAAACATGGCAAATCAAACAT 57.551 26.923 0.00 0.00 0.00 2.71
2882 2912 7.768120 AGACTTTTAAACATGGCAAATCAAACA 59.232 29.630 0.00 0.00 0.00 2.83
2883 2913 8.141835 AGACTTTTAAACATGGCAAATCAAAC 57.858 30.769 0.00 0.00 0.00 2.93
2884 2914 8.729805 AAGACTTTTAAACATGGCAAATCAAA 57.270 26.923 0.00 0.00 0.00 2.69
2885 2915 9.995003 ATAAGACTTTTAAACATGGCAAATCAA 57.005 25.926 0.00 0.00 0.00 2.57
2888 2918 9.869757 GGTATAAGACTTTTAAACATGGCAAAT 57.130 29.630 0.00 0.00 0.00 2.32
2889 2919 8.861086 TGGTATAAGACTTTTAAACATGGCAAA 58.139 29.630 0.00 0.00 0.00 3.68
2890 2920 8.410673 TGGTATAAGACTTTTAAACATGGCAA 57.589 30.769 0.00 0.00 0.00 4.52
2891 2921 7.885922 TCTGGTATAAGACTTTTAAACATGGCA 59.114 33.333 0.00 0.00 0.00 4.92
2892 2922 8.276252 TCTGGTATAAGACTTTTAAACATGGC 57.724 34.615 0.00 0.00 0.00 4.40
2901 2931 8.880750 GCGTTAGAAATCTGGTATAAGACTTTT 58.119 33.333 0.00 0.00 0.00 2.27
2902 2932 7.222224 CGCGTTAGAAATCTGGTATAAGACTTT 59.778 37.037 0.00 0.00 0.00 2.66
2903 2933 6.696148 CGCGTTAGAAATCTGGTATAAGACTT 59.304 38.462 0.00 0.00 0.00 3.01
2904 2934 6.207213 CGCGTTAGAAATCTGGTATAAGACT 58.793 40.000 0.00 0.00 0.00 3.24
2905 2935 5.401674 CCGCGTTAGAAATCTGGTATAAGAC 59.598 44.000 4.92 0.00 0.00 3.01
2906 2936 5.068198 ACCGCGTTAGAAATCTGGTATAAGA 59.932 40.000 4.92 0.00 0.00 2.10
2907 2937 5.287226 ACCGCGTTAGAAATCTGGTATAAG 58.713 41.667 4.92 0.00 0.00 1.73
2908 2938 5.266733 ACCGCGTTAGAAATCTGGTATAA 57.733 39.130 4.92 0.00 0.00 0.98
2909 2939 4.924305 ACCGCGTTAGAAATCTGGTATA 57.076 40.909 4.92 0.00 0.00 1.47
2910 2940 3.814005 ACCGCGTTAGAAATCTGGTAT 57.186 42.857 4.92 0.00 0.00 2.73
2911 2941 3.598019 AACCGCGTTAGAAATCTGGTA 57.402 42.857 4.92 0.00 0.00 3.25
2912 2942 2.467566 AACCGCGTTAGAAATCTGGT 57.532 45.000 4.92 0.00 0.00 4.00
2913 2943 3.824414 AAAACCGCGTTAGAAATCTGG 57.176 42.857 4.92 0.00 0.00 3.86
2914 2944 8.883789 TTTTATAAAACCGCGTTAGAAATCTG 57.116 30.769 4.92 0.00 0.00 2.90
2915 2945 9.550811 CTTTTTATAAAACCGCGTTAGAAATCT 57.449 29.630 10.18 0.00 0.00 2.40
2916 2946 9.545611 TCTTTTTATAAAACCGCGTTAGAAATC 57.454 29.630 10.18 0.00 0.00 2.17
2917 2947 9.550811 CTCTTTTTATAAAACCGCGTTAGAAAT 57.449 29.630 10.18 0.00 0.00 2.17
2918 2948 8.558700 ACTCTTTTTATAAAACCGCGTTAGAAA 58.441 29.630 10.18 4.53 0.00 2.52
2919 2949 8.011106 CACTCTTTTTATAAAACCGCGTTAGAA 58.989 33.333 10.18 0.00 0.00 2.10
2920 2950 7.512297 CACTCTTTTTATAAAACCGCGTTAGA 58.488 34.615 10.18 7.84 0.00 2.10
2921 2951 6.247791 GCACTCTTTTTATAAAACCGCGTTAG 59.752 38.462 10.18 4.05 0.00 2.34
2922 2952 6.079120 GCACTCTTTTTATAAAACCGCGTTA 58.921 36.000 10.18 0.00 0.00 3.18
2923 2953 4.913345 GCACTCTTTTTATAAAACCGCGTT 59.087 37.500 10.18 0.00 0.00 4.84
2924 2954 4.023878 TGCACTCTTTTTATAAAACCGCGT 60.024 37.500 10.18 3.73 0.00 6.01
2925 2955 4.319901 GTGCACTCTTTTTATAAAACCGCG 59.680 41.667 10.32 0.00 0.00 6.46
2926 2956 5.216648 TGTGCACTCTTTTTATAAAACCGC 58.783 37.500 19.41 9.02 0.00 5.68
2927 2957 6.915843 AGTTGTGCACTCTTTTTATAAAACCG 59.084 34.615 19.41 5.32 0.00 4.44
2928 2958 8.539674 CAAGTTGTGCACTCTTTTTATAAAACC 58.460 33.333 19.41 0.00 32.94 3.27
2929 2959 8.539674 CCAAGTTGTGCACTCTTTTTATAAAAC 58.460 33.333 19.41 9.11 32.94 2.43
2930 2960 7.708752 CCCAAGTTGTGCACTCTTTTTATAAAA 59.291 33.333 19.41 6.54 32.94 1.52
2931 2961 7.068839 TCCCAAGTTGTGCACTCTTTTTATAAA 59.931 33.333 19.41 0.00 32.94 1.40
2932 2962 6.547880 TCCCAAGTTGTGCACTCTTTTTATAA 59.452 34.615 19.41 0.00 32.94 0.98
2933 2963 6.065374 TCCCAAGTTGTGCACTCTTTTTATA 58.935 36.000 19.41 4.15 32.94 0.98
2934 2964 4.892934 TCCCAAGTTGTGCACTCTTTTTAT 59.107 37.500 19.41 0.00 32.94 1.40
2935 2965 4.274147 TCCCAAGTTGTGCACTCTTTTTA 58.726 39.130 19.41 7.15 32.94 1.52
2936 2966 3.096092 TCCCAAGTTGTGCACTCTTTTT 58.904 40.909 19.41 2.81 32.94 1.94
2937 2967 2.733956 TCCCAAGTTGTGCACTCTTTT 58.266 42.857 19.41 4.61 32.94 2.27
2938 2968 2.427095 GTTCCCAAGTTGTGCACTCTTT 59.573 45.455 19.41 6.44 32.94 2.52
2939 2969 2.024414 GTTCCCAAGTTGTGCACTCTT 58.976 47.619 19.41 18.24 32.94 2.85
2940 2970 1.212935 AGTTCCCAAGTTGTGCACTCT 59.787 47.619 19.41 13.35 32.94 3.24
2941 2971 1.680338 AGTTCCCAAGTTGTGCACTC 58.320 50.000 19.41 11.20 32.94 3.51
2942 2972 1.750778 CAAGTTCCCAAGTTGTGCACT 59.249 47.619 19.41 0.00 37.12 4.40
2943 2973 2.208326 CAAGTTCCCAAGTTGTGCAC 57.792 50.000 10.75 10.75 37.12 4.57
2948 2978 5.063204 TCACTCATACAAGTTCCCAAGTTG 58.937 41.667 0.00 0.00 45.25 3.16
2949 2979 5.304686 TCACTCATACAAGTTCCCAAGTT 57.695 39.130 0.00 0.00 0.00 2.66
2950 2980 4.974645 TCACTCATACAAGTTCCCAAGT 57.025 40.909 0.00 0.00 0.00 3.16
2951 2981 6.486657 TCTTTTCACTCATACAAGTTCCCAAG 59.513 38.462 0.00 0.00 0.00 3.61
2952 2982 6.361433 TCTTTTCACTCATACAAGTTCCCAA 58.639 36.000 0.00 0.00 0.00 4.12
2953 2983 5.935945 TCTTTTCACTCATACAAGTTCCCA 58.064 37.500 0.00 0.00 0.00 4.37
2954 2984 6.486993 AGTTCTTTTCACTCATACAAGTTCCC 59.513 38.462 0.00 0.00 0.00 3.97
2955 2985 7.226720 TCAGTTCTTTTCACTCATACAAGTTCC 59.773 37.037 0.00 0.00 0.00 3.62
2956 2986 8.142994 TCAGTTCTTTTCACTCATACAAGTTC 57.857 34.615 0.00 0.00 0.00 3.01
2957 2987 8.398665 GTTCAGTTCTTTTCACTCATACAAGTT 58.601 33.333 0.00 0.00 0.00 2.66
2958 2988 7.770897 AGTTCAGTTCTTTTCACTCATACAAGT 59.229 33.333 0.00 0.00 0.00 3.16
2959 2989 8.147642 AGTTCAGTTCTTTTCACTCATACAAG 57.852 34.615 0.00 0.00 0.00 3.16
2960 2990 8.506168 AAGTTCAGTTCTTTTCACTCATACAA 57.494 30.769 0.00 0.00 0.00 2.41
2961 2991 8.506168 AAAGTTCAGTTCTTTTCACTCATACA 57.494 30.769 0.00 0.00 32.14 2.29
2962 2992 8.831550 AGAAAGTTCAGTTCTTTTCACTCATAC 58.168 33.333 0.00 0.00 35.62 2.39
2963 2993 8.964476 AGAAAGTTCAGTTCTTTTCACTCATA 57.036 30.769 0.00 0.00 35.62 2.15
2964 2994 7.872113 AGAAAGTTCAGTTCTTTTCACTCAT 57.128 32.000 0.00 0.00 35.62 2.90
2965 2995 8.041323 AGTAGAAAGTTCAGTTCTTTTCACTCA 58.959 33.333 0.00 0.00 36.69 3.41
2966 2996 8.426881 AGTAGAAAGTTCAGTTCTTTTCACTC 57.573 34.615 0.00 0.00 36.69 3.51
2967 2997 8.261522 AGAGTAGAAAGTTCAGTTCTTTTCACT 58.738 33.333 0.00 0.00 36.69 3.41
2968 2998 8.426881 AGAGTAGAAAGTTCAGTTCTTTTCAC 57.573 34.615 0.00 0.00 36.69 3.18
2969 2999 9.530633 GTAGAGTAGAAAGTTCAGTTCTTTTCA 57.469 33.333 0.00 0.00 36.69 2.69
2970 3000 9.752961 AGTAGAGTAGAAAGTTCAGTTCTTTTC 57.247 33.333 0.00 0.00 36.69 2.29
2973 3003 9.752961 GAAAGTAGAGTAGAAAGTTCAGTTCTT 57.247 33.333 0.00 0.00 36.69 2.52
2974 3004 9.138596 AGAAAGTAGAGTAGAAAGTTCAGTTCT 57.861 33.333 0.00 0.00 38.80 3.01
2975 3005 9.752961 AAGAAAGTAGAGTAGAAAGTTCAGTTC 57.247 33.333 0.00 0.00 0.00 3.01
2976 3006 9.752961 GAAGAAAGTAGAGTAGAAAGTTCAGTT 57.247 33.333 0.00 0.00 0.00 3.16
2977 3007 9.138596 AGAAGAAAGTAGAGTAGAAAGTTCAGT 57.861 33.333 0.00 0.00 0.00 3.41
2978 3008 9.620660 GAGAAGAAAGTAGAGTAGAAAGTTCAG 57.379 37.037 0.00 0.00 0.00 3.02
2979 3009 9.357161 AGAGAAGAAAGTAGAGTAGAAAGTTCA 57.643 33.333 0.00 0.00 0.00 3.18
2980 3010 9.836076 GAGAGAAGAAAGTAGAGTAGAAAGTTC 57.164 37.037 0.00 0.00 0.00 3.01
2981 3011 9.357161 TGAGAGAAGAAAGTAGAGTAGAAAGTT 57.643 33.333 0.00 0.00 0.00 2.66
2982 3012 8.927675 TGAGAGAAGAAAGTAGAGTAGAAAGT 57.072 34.615 0.00 0.00 0.00 2.66
2986 3016 9.575868 TCTTTTGAGAGAAGAAAGTAGAGTAGA 57.424 33.333 0.00 0.00 33.32 2.59
2998 3028 8.624776 GGAGTTCAATTTTCTTTTGAGAGAAGA 58.375 33.333 0.00 0.00 37.01 2.87
2999 3029 8.628280 AGGAGTTCAATTTTCTTTTGAGAGAAG 58.372 33.333 0.00 0.00 37.01 2.85
3000 3030 8.525290 AGGAGTTCAATTTTCTTTTGAGAGAA 57.475 30.769 0.00 0.00 34.76 2.87
3001 3031 8.525290 AAGGAGTTCAATTTTCTTTTGAGAGA 57.475 30.769 0.00 0.00 34.76 3.10
3002 3032 9.591792 AAAAGGAGTTCAATTTTCTTTTGAGAG 57.408 29.630 0.00 0.00 34.76 3.20
3003 3033 9.942850 AAAAAGGAGTTCAATTTTCTTTTGAGA 57.057 25.926 0.00 0.00 35.48 3.27
3026 3056 2.765689 TGGCCCTGAAAGAGGAAAAA 57.234 45.000 0.00 0.00 46.33 1.94
3027 3057 2.999185 ATGGCCCTGAAAGAGGAAAA 57.001 45.000 0.00 0.00 46.33 2.29
3028 3058 2.807676 GAATGGCCCTGAAAGAGGAAA 58.192 47.619 0.00 0.00 46.33 3.13
3029 3059 1.340017 CGAATGGCCCTGAAAGAGGAA 60.340 52.381 0.00 0.00 46.33 3.36
3030 3060 0.253044 CGAATGGCCCTGAAAGAGGA 59.747 55.000 0.00 0.00 46.33 3.71
3031 3061 1.379642 GCGAATGGCCCTGAAAGAGG 61.380 60.000 0.00 0.00 42.38 3.69
3032 3062 0.677731 TGCGAATGGCCCTGAAAGAG 60.678 55.000 0.00 0.00 42.61 2.85
3033 3063 0.251121 TTGCGAATGGCCCTGAAAGA 60.251 50.000 0.00 0.00 42.61 2.52
3034 3064 0.602562 TTTGCGAATGGCCCTGAAAG 59.397 50.000 0.00 0.00 42.61 2.62
3035 3065 0.602562 CTTTGCGAATGGCCCTGAAA 59.397 50.000 0.00 0.00 42.61 2.69
3036 3066 1.876497 GCTTTGCGAATGGCCCTGAA 61.876 55.000 0.00 0.00 42.61 3.02
3037 3067 2.342650 GCTTTGCGAATGGCCCTGA 61.343 57.895 0.00 0.00 42.61 3.86
3038 3068 2.182537 GCTTTGCGAATGGCCCTG 59.817 61.111 0.00 0.00 42.61 4.45
3049 3079 2.048877 ATTGCAGTGGCGCTTTGC 60.049 55.556 19.38 19.38 45.35 3.68
3050 3080 1.005294 GTCATTGCAGTGGCGCTTTG 61.005 55.000 7.64 4.57 45.35 2.77
3051 3081 1.286880 GTCATTGCAGTGGCGCTTT 59.713 52.632 7.64 0.00 45.35 3.51
3052 3082 1.246056 ATGTCATTGCAGTGGCGCTT 61.246 50.000 7.64 0.00 45.35 4.68
3053 3083 1.246056 AATGTCATTGCAGTGGCGCT 61.246 50.000 7.64 0.00 45.35 5.92
3054 3084 0.799534 GAATGTCATTGCAGTGGCGC 60.800 55.000 9.39 0.00 45.35 6.53
3055 3085 0.522626 TGAATGTCATTGCAGTGGCG 59.477 50.000 9.39 0.00 45.35 5.69
3056 3086 2.728690 TTGAATGTCATTGCAGTGGC 57.271 45.000 6.89 6.89 41.68 5.01
3057 3087 5.697178 TGAAAATTGAATGTCATTGCAGTGG 59.303 36.000 9.56 0.00 0.00 4.00
3058 3088 6.772770 TGAAAATTGAATGTCATTGCAGTG 57.227 33.333 1.88 2.16 0.00 3.66
3059 3089 7.789273 TTTGAAAATTGAATGTCATTGCAGT 57.211 28.000 1.88 0.00 0.00 4.40
3083 3113 9.499479 TGGCAATTGATGTTTTTGTAATGTAAT 57.501 25.926 10.34 0.00 0.00 1.89
3084 3114 8.893219 TGGCAATTGATGTTTTTGTAATGTAA 57.107 26.923 10.34 0.00 0.00 2.41
3085 3115 8.893219 TTGGCAATTGATGTTTTTGTAATGTA 57.107 26.923 10.34 0.00 0.00 2.29
3086 3116 7.798596 TTGGCAATTGATGTTTTTGTAATGT 57.201 28.000 10.34 0.00 0.00 2.71
3087 3117 8.344098 ACTTTGGCAATTGATGTTTTTGTAATG 58.656 29.630 10.34 0.00 0.00 1.90
3088 3118 8.449251 ACTTTGGCAATTGATGTTTTTGTAAT 57.551 26.923 10.34 0.00 0.00 1.89
3089 3119 7.856145 ACTTTGGCAATTGATGTTTTTGTAA 57.144 28.000 10.34 0.00 0.00 2.41
3090 3120 7.439655 GGTACTTTGGCAATTGATGTTTTTGTA 59.560 33.333 10.34 0.00 0.00 2.41
3091 3121 6.259829 GGTACTTTGGCAATTGATGTTTTTGT 59.740 34.615 10.34 0.00 0.00 2.83
3092 3122 6.259608 TGGTACTTTGGCAATTGATGTTTTTG 59.740 34.615 10.34 0.00 0.00 2.44
3093 3123 6.352516 TGGTACTTTGGCAATTGATGTTTTT 58.647 32.000 10.34 0.00 0.00 1.94
3094 3124 5.923204 TGGTACTTTGGCAATTGATGTTTT 58.077 33.333 10.34 0.00 0.00 2.43
3095 3125 5.543507 TGGTACTTTGGCAATTGATGTTT 57.456 34.783 10.34 0.00 0.00 2.83
3096 3126 5.543507 TTGGTACTTTGGCAATTGATGTT 57.456 34.783 10.34 0.00 0.00 2.71
3097 3127 5.481105 CATTGGTACTTTGGCAATTGATGT 58.519 37.500 10.34 0.00 0.00 3.06
3098 3128 4.330620 GCATTGGTACTTTGGCAATTGATG 59.669 41.667 10.34 0.40 0.00 3.07
3099 3129 4.020396 TGCATTGGTACTTTGGCAATTGAT 60.020 37.500 10.34 0.00 0.00 2.57
3100 3130 3.323115 TGCATTGGTACTTTGGCAATTGA 59.677 39.130 10.34 0.00 0.00 2.57
3101 3131 3.661944 TGCATTGGTACTTTGGCAATTG 58.338 40.909 0.00 0.00 0.00 2.32
3102 3132 4.348863 TTGCATTGGTACTTTGGCAATT 57.651 36.364 0.00 0.00 36.45 2.32
3103 3133 4.348863 TTTGCATTGGTACTTTGGCAAT 57.651 36.364 0.00 3.29 40.46 3.56
3104 3134 3.827008 TTTGCATTGGTACTTTGGCAA 57.173 38.095 0.00 0.00 39.24 4.52
3105 3135 3.827008 TTTTGCATTGGTACTTTGGCA 57.173 38.095 0.00 0.00 0.00 4.92
3106 3136 4.514816 ACATTTTTGCATTGGTACTTTGGC 59.485 37.500 0.00 0.00 0.00 4.52
3107 3137 5.049543 CCACATTTTTGCATTGGTACTTTGG 60.050 40.000 0.00 0.00 0.00 3.28
3108 3138 5.560567 GCCACATTTTTGCATTGGTACTTTG 60.561 40.000 0.00 0.00 0.00 2.77
3109 3139 4.514816 GCCACATTTTTGCATTGGTACTTT 59.485 37.500 0.00 0.00 0.00 2.66
3110 3140 4.064388 GCCACATTTTTGCATTGGTACTT 58.936 39.130 0.00 0.00 0.00 2.24
3111 3141 3.070734 TGCCACATTTTTGCATTGGTACT 59.929 39.130 0.00 0.00 0.00 2.73
3112 3142 3.397482 TGCCACATTTTTGCATTGGTAC 58.603 40.909 0.00 0.00 0.00 3.34
3113 3143 3.758755 TGCCACATTTTTGCATTGGTA 57.241 38.095 0.00 0.00 0.00 3.25
3114 3144 2.634815 TGCCACATTTTTGCATTGGT 57.365 40.000 0.00 0.00 0.00 3.67
3115 3145 4.506886 AATTGCCACATTTTTGCATTGG 57.493 36.364 0.00 0.00 34.51 3.16
3116 3146 6.843208 TCATAATTGCCACATTTTTGCATTG 58.157 32.000 0.00 0.00 34.51 2.82
3117 3147 7.450124 TTCATAATTGCCACATTTTTGCATT 57.550 28.000 0.00 0.00 34.51 3.56
3118 3148 7.175293 ACTTTCATAATTGCCACATTTTTGCAT 59.825 29.630 0.00 0.00 34.51 3.96
3119 3149 6.485984 ACTTTCATAATTGCCACATTTTTGCA 59.514 30.769 0.00 0.00 0.00 4.08
3120 3150 6.797995 CACTTTCATAATTGCCACATTTTTGC 59.202 34.615 0.00 0.00 0.00 3.68
3121 3151 6.797995 GCACTTTCATAATTGCCACATTTTTG 59.202 34.615 0.00 0.00 34.78 2.44
3122 3152 6.485984 TGCACTTTCATAATTGCCACATTTTT 59.514 30.769 0.00 0.00 38.69 1.94
3123 3153 5.996513 TGCACTTTCATAATTGCCACATTTT 59.003 32.000 0.00 0.00 38.69 1.82
3124 3154 5.549347 TGCACTTTCATAATTGCCACATTT 58.451 33.333 0.00 0.00 38.69 2.32
3125 3155 5.149973 TGCACTTTCATAATTGCCACATT 57.850 34.783 0.00 0.00 38.69 2.71
3126 3156 4.804868 TGCACTTTCATAATTGCCACAT 57.195 36.364 0.00 0.00 38.69 3.21
3127 3157 4.597404 TTGCACTTTCATAATTGCCACA 57.403 36.364 0.00 0.00 38.69 4.17
3128 3158 5.232838 GCTATTGCACTTTCATAATTGCCAC 59.767 40.000 0.00 0.00 38.69 5.01
3129 3159 5.127519 AGCTATTGCACTTTCATAATTGCCA 59.872 36.000 1.12 0.00 38.69 4.92
3130 3160 5.461078 CAGCTATTGCACTTTCATAATTGCC 59.539 40.000 1.12 0.00 38.69 4.52
3131 3161 6.506464 CAGCTATTGCACTTTCATAATTGC 57.494 37.500 1.12 0.00 42.74 3.56
3146 3176 3.865164 TCTACACATGTTCGCAGCTATTG 59.135 43.478 0.00 0.00 0.00 1.90
3147 3177 4.123497 TCTACACATGTTCGCAGCTATT 57.877 40.909 0.00 0.00 0.00 1.73
3148 3178 3.801114 TCTACACATGTTCGCAGCTAT 57.199 42.857 0.00 0.00 0.00 2.97
3149 3179 3.511699 CTTCTACACATGTTCGCAGCTA 58.488 45.455 0.00 0.00 0.00 3.32
3150 3180 2.341257 CTTCTACACATGTTCGCAGCT 58.659 47.619 0.00 0.00 0.00 4.24
3151 3181 1.394917 CCTTCTACACATGTTCGCAGC 59.605 52.381 0.00 0.00 0.00 5.25
3152 3182 2.688507 ACCTTCTACACATGTTCGCAG 58.311 47.619 0.00 0.00 0.00 5.18
3153 3183 2.831685 ACCTTCTACACATGTTCGCA 57.168 45.000 0.00 0.00 0.00 5.10
3154 3184 5.796350 ATTAACCTTCTACACATGTTCGC 57.204 39.130 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.