Multiple sequence alignment - TraesCS7A01G244600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G244600 chr7A 100.000 3143 0 0 1 3143 222289718 222292860 0.000000e+00 5805
1 TraesCS7A01G244600 chr7A 85.230 413 33 15 161 548 541459476 541459885 1.760000e-107 399
2 TraesCS7A01G244600 chr7A 83.252 412 43 10 161 548 570172833 570173242 3.860000e-94 355
3 TraesCS7A01G244600 chr7A 76.886 411 64 17 161 544 594600155 594599749 1.480000e-48 204
4 TraesCS7A01G244600 chr7B 94.842 1706 54 14 815 2491 192041418 192039718 0.000000e+00 2632
5 TraesCS7A01G244600 chr7B 93.243 444 17 3 2639 3078 192039654 192039220 2.640000e-180 641
6 TraesCS7A01G244600 chr7B 91.139 158 14 0 1 158 192041626 192041469 6.830000e-52 215
7 TraesCS7A01G244600 chr7B 95.652 69 3 0 2565 2633 675631457 675631389 9.210000e-21 111
8 TraesCS7A01G244600 chr7D 94.302 1720 46 18 876 2567 209520858 209522553 0.000000e+00 2586
9 TraesCS7A01G244600 chr7D 91.372 452 24 9 2635 3078 209522772 209523216 3.470000e-169 604
10 TraesCS7A01G244600 chr5D 86.241 407 33 10 161 544 362192525 362192931 1.350000e-113 420
11 TraesCS7A01G244600 chr5D 86.386 404 30 12 161 544 448144905 448144507 4.850000e-113 418
12 TraesCS7A01G244600 chr5D 83.951 405 40 13 160 543 405332756 405332356 6.410000e-97 364
13 TraesCS7A01G244600 chr2A 85.823 395 42 8 161 544 706573718 706573327 1.050000e-109 407
14 TraesCS7A01G244600 chr2A 85.024 414 35 10 158 547 672443495 672443085 2.270000e-106 396
15 TraesCS7A01G244600 chr1B 85.049 408 30 13 160 544 664076062 664076461 1.370000e-103 387
16 TraesCS7A01G244600 chr1B 100.000 60 0 0 2571 2630 618554685 618554744 9.210000e-21 111
17 TraesCS7A01G244600 chr1B 98.413 63 1 0 2571 2633 642067282 642067220 9.210000e-21 111
18 TraesCS7A01G244600 chr2B 83.744 406 40 10 161 543 167797330 167796928 8.290000e-96 361
19 TraesCS7A01G244600 chrUn 83.495 412 40 14 161 547 71414603 71414195 2.980000e-95 359
20 TraesCS7A01G244600 chr1D 90.511 274 21 4 161 430 485505678 485505406 1.070000e-94 357
21 TraesCS7A01G244600 chr3A 93.780 209 11 2 599 807 651189513 651189307 2.350000e-81 313
22 TraesCS7A01G244600 chr3A 93.301 209 12 2 599 807 651155649 651155443 1.090000e-79 307
23 TraesCS7A01G244600 chr3A 93.333 210 10 4 599 807 726233398 726233192 1.090000e-79 307
24 TraesCS7A01G244600 chr3A 93.301 209 11 3 600 807 76343631 76343837 3.940000e-79 305
25 TraesCS7A01G244600 chr3A 93.301 209 11 3 599 807 184272625 184272420 3.940000e-79 305
26 TraesCS7A01G244600 chr5A 93.333 210 12 2 599 807 512630170 512630378 3.040000e-80 309
27 TraesCS7A01G244600 chr5A 93.301 209 11 3 599 807 330283902 330283697 3.940000e-79 305
28 TraesCS7A01G244600 chr5A 80.905 398 58 14 161 544 510011643 510011250 6.590000e-77 298
29 TraesCS7A01G244600 chr1A 93.333 210 11 3 599 807 352839927 352839720 1.090000e-79 307
30 TraesCS7A01G244600 chr6A 92.130 216 14 3 593 807 604910225 604910438 5.090000e-78 302
31 TraesCS7A01G244600 chr6A 100.000 60 0 0 2571 2630 602356509 602356568 9.210000e-21 111
32 TraesCS7A01G244600 chr4A 82.831 332 41 11 233 553 559948271 559947945 1.850000e-72 283
33 TraesCS7A01G244600 chr4A 100.000 61 0 0 2570 2630 737301688 737301748 2.560000e-21 113
34 TraesCS7A01G244600 chr5B 77.698 417 61 20 158 547 557104162 557104573 3.150000e-55 226
35 TraesCS7A01G244600 chr6D 100.000 60 0 0 2569 2628 3319206 3319265 9.210000e-21 111
36 TraesCS7A01G244600 chr4B 98.413 63 1 0 2571 2633 132882417 132882355 9.210000e-21 111
37 TraesCS7A01G244600 chr3D 98.413 63 1 0 2571 2633 61053137 61053075 9.210000e-21 111
38 TraesCS7A01G244600 chr6B 95.652 69 2 1 2573 2641 154827284 154827351 3.310000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G244600 chr7A 222289718 222292860 3142 False 5805.000000 5805 100.000000 1 3143 1 chr7A.!!$F1 3142
1 TraesCS7A01G244600 chr7B 192039220 192041626 2406 True 1162.666667 2632 93.074667 1 3078 3 chr7B.!!$R2 3077
2 TraesCS7A01G244600 chr7D 209520858 209523216 2358 False 1595.000000 2586 92.837000 876 3078 2 chr7D.!!$F1 2202

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
657 658 0.032117 TGAGACCCGTCCTGATGGAT 60.032 55.0 6.98 0.0 45.29 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2271 2273 0.179018 ACAGTTGGCACTTGGACCTC 60.179 55.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.000717 GTGTGAAACCATCCAAACCCG 60.001 52.381 0.00 0.00 34.36 5.28
26 27 0.178975 TGAAACCATCCAAACCCGCT 60.179 50.000 0.00 0.00 0.00 5.52
58 59 4.857037 GTGTAAATTTGCAGGATTTCGGAC 59.143 41.667 9.39 7.39 0.00 4.79
71 72 4.444838 CGGACGCCGGATTGGTCA 62.445 66.667 5.05 0.00 44.15 4.02
73 74 2.577059 GACGCCGGATTGGTCAGA 59.423 61.111 5.05 0.00 41.21 3.27
75 76 0.672401 GACGCCGGATTGGTCAGAAA 60.672 55.000 5.05 0.00 41.21 2.52
82 83 5.102313 GCCGGATTGGTCAGAAAAATTTAG 58.898 41.667 5.05 0.00 41.21 1.85
91 92 6.016943 TGGTCAGAAAAATTTAGGTAACCGTG 60.017 38.462 0.00 0.00 37.17 4.94
139 140 0.806102 CGATCGATTTGGTGAGGCGT 60.806 55.000 10.26 0.00 0.00 5.68
154 155 3.439129 TGAGGCGTGATATATAGACGGTG 59.561 47.826 15.14 0.00 33.68 4.94
158 159 4.341099 GCGTGATATATAGACGGTGCTAC 58.659 47.826 15.14 0.00 33.68 3.58
160 161 5.561070 CGTGATATATAGACGGTGCTACTG 58.439 45.833 8.32 0.00 0.00 2.74
161 162 5.447413 CGTGATATATAGACGGTGCTACTGG 60.447 48.000 8.32 0.00 0.00 4.00
162 163 5.646793 GTGATATATAGACGGTGCTACTGGA 59.353 44.000 0.00 0.00 0.00 3.86
163 164 5.880887 TGATATATAGACGGTGCTACTGGAG 59.119 44.000 0.00 0.00 0.00 3.86
164 165 1.693627 ATAGACGGTGCTACTGGAGG 58.306 55.000 0.00 0.00 0.00 4.30
165 166 0.395311 TAGACGGTGCTACTGGAGGG 60.395 60.000 0.00 0.00 0.00 4.30
166 167 2.683933 ACGGTGCTACTGGAGGGG 60.684 66.667 0.00 0.00 0.00 4.79
168 169 1.987855 CGGTGCTACTGGAGGGGAA 60.988 63.158 0.00 0.00 0.00 3.97
169 170 1.602771 GGTGCTACTGGAGGGGAAC 59.397 63.158 0.00 0.00 0.00 3.62
170 171 0.910088 GGTGCTACTGGAGGGGAACT 60.910 60.000 0.00 0.00 0.00 3.01
171 172 0.984995 GTGCTACTGGAGGGGAACTT 59.015 55.000 0.00 0.00 0.00 2.66
172 173 1.351350 GTGCTACTGGAGGGGAACTTT 59.649 52.381 0.00 0.00 0.00 2.66
173 174 2.062636 TGCTACTGGAGGGGAACTTTT 58.937 47.619 0.00 0.00 0.00 2.27
174 175 2.224769 TGCTACTGGAGGGGAACTTTTG 60.225 50.000 0.00 0.00 0.00 2.44
175 176 2.880167 GCTACTGGAGGGGAACTTTTGG 60.880 54.545 0.00 0.00 0.00 3.28
176 177 1.231963 ACTGGAGGGGAACTTTTGGT 58.768 50.000 0.00 0.00 0.00 3.67
177 178 1.573857 ACTGGAGGGGAACTTTTGGTT 59.426 47.619 0.00 0.00 41.40 3.67
190 191 7.923414 GAACTTTTGGTTCCTGAGTACATAT 57.077 36.000 0.00 0.00 46.17 1.78
191 192 7.687941 AACTTTTGGTTCCTGAGTACATATG 57.312 36.000 0.00 0.00 31.69 1.78
192 193 6.779860 ACTTTTGGTTCCTGAGTACATATGT 58.220 36.000 13.93 13.93 0.00 2.29
193 194 7.913789 ACTTTTGGTTCCTGAGTACATATGTA 58.086 34.615 11.62 11.62 0.00 2.29
239 240 9.911138 AGCAATTCAACAAAAAGTCAAAAATTT 57.089 22.222 0.00 0.00 0.00 1.82
264 265 9.748708 TTCTGAAATTAACTTGACCTTTCATTG 57.251 29.630 0.00 0.00 35.83 2.82
265 266 8.912988 TCTGAAATTAACTTGACCTTTCATTGT 58.087 29.630 0.00 0.00 35.83 2.71
267 268 9.959749 TGAAATTAACTTGACCTTTCATTGTAC 57.040 29.630 0.00 0.00 32.52 2.90
272 273 7.730364 AACTTGACCTTTCATTGTACTAGTG 57.270 36.000 5.39 0.00 0.00 2.74
273 274 7.062749 ACTTGACCTTTCATTGTACTAGTGA 57.937 36.000 5.39 0.00 0.00 3.41
274 275 7.155328 ACTTGACCTTTCATTGTACTAGTGAG 58.845 38.462 5.39 0.00 0.00 3.51
275 276 6.911250 TGACCTTTCATTGTACTAGTGAGA 57.089 37.500 5.39 0.00 0.00 3.27
276 277 7.297936 TGACCTTTCATTGTACTAGTGAGAA 57.702 36.000 5.39 0.00 0.00 2.87
277 278 7.732025 TGACCTTTCATTGTACTAGTGAGAAA 58.268 34.615 5.39 7.55 0.00 2.52
278 279 8.208224 TGACCTTTCATTGTACTAGTGAGAAAA 58.792 33.333 5.39 0.00 0.00 2.29
279 280 8.608844 ACCTTTCATTGTACTAGTGAGAAAAG 57.391 34.615 5.39 7.74 0.00 2.27
280 281 8.211629 ACCTTTCATTGTACTAGTGAGAAAAGT 58.788 33.333 5.39 5.87 0.00 2.66
281 282 9.057089 CCTTTCATTGTACTAGTGAGAAAAGTT 57.943 33.333 5.39 0.00 0.00 2.66
284 285 9.607988 TTCATTGTACTAGTGAGAAAAGTTTCA 57.392 29.630 5.39 0.00 39.61 2.69
285 286 9.042008 TCATTGTACTAGTGAGAAAAGTTTCAC 57.958 33.333 5.39 0.87 43.08 3.18
286 287 8.826710 CATTGTACTAGTGAGAAAAGTTTCACA 58.173 33.333 5.39 3.47 44.72 3.58
287 288 8.780846 TTGTACTAGTGAGAAAAGTTTCACAA 57.219 30.769 5.39 0.22 44.72 3.33
288 289 8.780846 TGTACTAGTGAGAAAAGTTTCACAAA 57.219 30.769 5.39 0.00 44.72 2.83
289 290 9.221933 TGTACTAGTGAGAAAAGTTTCACAAAA 57.778 29.630 5.39 0.00 44.72 2.44
292 293 9.010029 ACTAGTGAGAAAAGTTTCACAAAAAGA 57.990 29.630 8.50 0.00 44.72 2.52
293 294 9.840427 CTAGTGAGAAAAGTTTCACAAAAAGAA 57.160 29.630 8.50 0.00 44.72 2.52
295 296 9.196552 AGTGAGAAAAGTTTCACAAAAAGAAAG 57.803 29.630 8.50 0.00 44.72 2.62
296 297 8.978539 GTGAGAAAAGTTTCACAAAAAGAAAGT 58.021 29.630 5.63 0.00 42.47 2.66
297 298 9.541143 TGAGAAAAGTTTCACAAAAAGAAAGTT 57.459 25.926 6.56 0.00 45.57 2.66
299 300 8.988934 AGAAAAGTTTCACAAAAAGAAAGTTCC 58.011 29.630 6.56 5.40 43.89 3.62
300 301 8.902540 AAAAGTTTCACAAAAAGAAAGTTCCT 57.097 26.923 8.62 0.00 43.89 3.36
301 302 8.534333 AAAGTTTCACAAAAAGAAAGTTCCTC 57.466 30.769 8.62 0.00 43.89 3.71
302 303 7.468141 AGTTTCACAAAAAGAAAGTTCCTCT 57.532 32.000 0.00 0.00 35.66 3.69
303 304 7.896811 AGTTTCACAAAAAGAAAGTTCCTCTT 58.103 30.769 0.00 0.00 35.66 2.85
305 306 8.435430 GTTTCACAAAAAGAAAGTTCCTCTTTG 58.565 33.333 3.81 0.00 45.15 2.77
306 307 7.461182 TCACAAAAAGAAAGTTCCTCTTTGA 57.539 32.000 0.00 0.00 45.15 2.69
307 308 7.312899 TCACAAAAAGAAAGTTCCTCTTTGAC 58.687 34.615 0.00 0.00 45.15 3.18
308 309 7.176690 TCACAAAAAGAAAGTTCCTCTTTGACT 59.823 33.333 0.00 0.00 45.15 3.41
309 310 7.814587 CACAAAAAGAAAGTTCCTCTTTGACTT 59.185 33.333 0.00 0.00 45.15 3.01
310 311 8.029522 ACAAAAAGAAAGTTCCTCTTTGACTTC 58.970 33.333 0.00 0.00 45.15 3.01
311 312 7.946381 AAAAGAAAGTTCCTCTTTGACTTCT 57.054 32.000 3.81 0.00 45.15 2.85
312 313 7.946381 AAAGAAAGTTCCTCTTTGACTTCTT 57.054 32.000 2.42 0.00 45.15 2.52
313 314 7.946381 AAGAAAGTTCCTCTTTGACTTCTTT 57.054 32.000 0.00 0.00 45.15 2.52
314 315 7.946381 AGAAAGTTCCTCTTTGACTTCTTTT 57.054 32.000 0.00 0.00 45.15 2.27
315 316 9.462606 AAGAAAGTTCCTCTTTGACTTCTTTTA 57.537 29.630 0.00 0.00 45.15 1.52
316 317 9.462606 AGAAAGTTCCTCTTTGACTTCTTTTAA 57.537 29.630 0.00 0.00 45.15 1.52
345 346 8.816640 AGACAAATTTTCAATCAAAATAGCGT 57.183 26.923 0.00 0.00 42.86 5.07
346 347 8.702438 AGACAAATTTTCAATCAAAATAGCGTG 58.298 29.630 0.00 0.00 42.86 5.34
347 348 8.586570 ACAAATTTTCAATCAAAATAGCGTGA 57.413 26.923 0.00 0.00 42.86 4.35
348 349 9.039870 ACAAATTTTCAATCAAAATAGCGTGAA 57.960 25.926 0.00 0.00 42.86 3.18
353 354 8.894409 TTTCAATCAAAATAGCGTGAATAGTG 57.106 30.769 0.00 0.00 0.00 2.74
354 355 7.841915 TCAATCAAAATAGCGTGAATAGTGA 57.158 32.000 0.00 0.00 0.00 3.41
355 356 7.684670 TCAATCAAAATAGCGTGAATAGTGAC 58.315 34.615 0.00 0.00 0.00 3.67
356 357 6.604735 ATCAAAATAGCGTGAATAGTGACC 57.395 37.500 0.00 0.00 0.00 4.02
357 358 5.730550 TCAAAATAGCGTGAATAGTGACCT 58.269 37.500 0.00 0.00 0.00 3.85
358 359 6.869695 TCAAAATAGCGTGAATAGTGACCTA 58.130 36.000 0.00 0.00 0.00 3.08
359 360 7.497595 TCAAAATAGCGTGAATAGTGACCTAT 58.502 34.615 0.00 0.00 35.33 2.57
360 361 8.635328 TCAAAATAGCGTGAATAGTGACCTATA 58.365 33.333 0.00 0.00 32.57 1.31
361 362 9.256477 CAAAATAGCGTGAATAGTGACCTATAA 57.744 33.333 0.00 0.00 32.57 0.98
362 363 9.998106 AAAATAGCGTGAATAGTGACCTATAAT 57.002 29.630 0.00 0.00 32.57 1.28
365 366 6.622549 AGCGTGAATAGTGACCTATAATAGC 58.377 40.000 0.00 0.00 32.57 2.97
366 367 6.208797 AGCGTGAATAGTGACCTATAATAGCA 59.791 38.462 0.00 0.00 32.57 3.49
367 368 6.866770 GCGTGAATAGTGACCTATAATAGCAA 59.133 38.462 0.00 0.00 32.57 3.91
368 369 7.384115 GCGTGAATAGTGACCTATAATAGCAAA 59.616 37.037 0.00 0.00 32.57 3.68
369 370 9.424319 CGTGAATAGTGACCTATAATAGCAAAT 57.576 33.333 0.00 0.00 32.57 2.32
400 401 9.734620 TTTGTCTTTTTCTATGTGAAGTCAATG 57.265 29.630 0.00 0.00 35.89 2.82
401 402 8.450578 TGTCTTTTTCTATGTGAAGTCAATGT 57.549 30.769 0.00 0.00 35.89 2.71
402 403 8.902806 TGTCTTTTTCTATGTGAAGTCAATGTT 58.097 29.630 0.00 0.00 35.89 2.71
403 404 9.173939 GTCTTTTTCTATGTGAAGTCAATGTTG 57.826 33.333 0.00 0.00 35.89 3.33
404 405 8.352201 TCTTTTTCTATGTGAAGTCAATGTTGG 58.648 33.333 0.00 0.00 35.89 3.77
405 406 7.581213 TTTTCTATGTGAAGTCAATGTTGGT 57.419 32.000 0.00 0.00 35.89 3.67
406 407 7.581213 TTTCTATGTGAAGTCAATGTTGGTT 57.419 32.000 0.00 0.00 35.89 3.67
407 408 7.581213 TTCTATGTGAAGTCAATGTTGGTTT 57.419 32.000 0.00 0.00 0.00 3.27
408 409 7.581213 TCTATGTGAAGTCAATGTTGGTTTT 57.419 32.000 0.00 0.00 0.00 2.43
409 410 8.006298 TCTATGTGAAGTCAATGTTGGTTTTT 57.994 30.769 0.00 0.00 0.00 1.94
448 449 5.277857 ACTAGTGCACAAGTAAGTCAAGT 57.722 39.130 21.04 3.51 0.00 3.16
449 450 5.671493 ACTAGTGCACAAGTAAGTCAAGTT 58.329 37.500 21.04 0.00 0.00 2.66
450 451 6.113411 ACTAGTGCACAAGTAAGTCAAGTTT 58.887 36.000 21.04 0.00 0.00 2.66
451 452 7.270047 ACTAGTGCACAAGTAAGTCAAGTTTA 58.730 34.615 21.04 0.00 0.00 2.01
452 453 6.995511 AGTGCACAAGTAAGTCAAGTTTAA 57.004 33.333 21.04 0.00 0.00 1.52
453 454 7.568199 AGTGCACAAGTAAGTCAAGTTTAAT 57.432 32.000 21.04 0.00 0.00 1.40
454 455 7.639945 AGTGCACAAGTAAGTCAAGTTTAATC 58.360 34.615 21.04 0.00 0.00 1.75
455 456 7.499232 AGTGCACAAGTAAGTCAAGTTTAATCT 59.501 33.333 21.04 0.00 0.00 2.40
456 457 8.770828 GTGCACAAGTAAGTCAAGTTTAATCTA 58.229 33.333 13.17 0.00 0.00 1.98
457 458 9.502091 TGCACAAGTAAGTCAAGTTTAATCTAT 57.498 29.630 0.00 0.00 0.00 1.98
526 527 9.729281 ACCCATTTAAGGTTTATATACATACGG 57.271 33.333 0.00 0.00 32.05 4.02
527 528 9.169592 CCCATTTAAGGTTTATATACATACGGG 57.830 37.037 0.00 0.00 0.00 5.28
528 529 9.947433 CCATTTAAGGTTTATATACATACGGGA 57.053 33.333 0.00 0.00 0.00 5.14
530 531 9.662947 ATTTAAGGTTTATATACATACGGGAGC 57.337 33.333 0.00 0.00 0.00 4.70
531 532 5.672421 AGGTTTATATACATACGGGAGCC 57.328 43.478 0.00 0.00 0.00 4.70
532 533 5.088730 AGGTTTATATACATACGGGAGCCA 58.911 41.667 0.00 0.00 0.00 4.75
533 534 5.544948 AGGTTTATATACATACGGGAGCCAA 59.455 40.000 0.00 0.00 0.00 4.52
534 535 6.043474 AGGTTTATATACATACGGGAGCCAAA 59.957 38.462 0.00 0.00 0.00 3.28
535 536 6.370718 GGTTTATATACATACGGGAGCCAAAG 59.629 42.308 0.00 0.00 0.00 2.77
536 537 2.930826 ATACATACGGGAGCCAAAGG 57.069 50.000 0.00 0.00 0.00 3.11
537 538 0.834612 TACATACGGGAGCCAAAGGG 59.165 55.000 0.00 0.00 37.18 3.95
538 539 1.205460 ACATACGGGAGCCAAAGGGT 61.205 55.000 0.00 0.00 36.17 4.34
539 540 0.748005 CATACGGGAGCCAAAGGGTG 60.748 60.000 0.00 0.00 36.17 4.61
540 541 1.205460 ATACGGGAGCCAAAGGGTGT 61.205 55.000 0.00 0.00 36.17 4.16
541 542 1.420532 TACGGGAGCCAAAGGGTGTT 61.421 55.000 0.00 0.00 36.17 3.32
542 543 1.530655 CGGGAGCCAAAGGGTGTTT 60.531 57.895 0.00 0.00 36.17 2.83
543 544 1.524008 CGGGAGCCAAAGGGTGTTTC 61.524 60.000 0.00 0.00 36.17 2.78
544 545 0.178961 GGGAGCCAAAGGGTGTTTCT 60.179 55.000 0.00 0.00 36.17 2.52
545 546 1.248486 GGAGCCAAAGGGTGTTTCTC 58.752 55.000 0.00 0.00 36.17 2.87
546 547 1.248486 GAGCCAAAGGGTGTTTCTCC 58.752 55.000 0.00 0.00 36.17 3.71
547 548 0.537371 AGCCAAAGGGTGTTTCTCCG 60.537 55.000 0.00 0.00 36.17 4.63
548 549 1.524008 GCCAAAGGGTGTTTCTCCGG 61.524 60.000 0.00 0.00 36.17 5.14
549 550 0.179001 CCAAAGGGTGTTTCTCCGGT 60.179 55.000 0.00 0.00 0.00 5.28
550 551 1.072648 CCAAAGGGTGTTTCTCCGGTA 59.927 52.381 0.00 0.00 0.00 4.02
551 552 2.148768 CAAAGGGTGTTTCTCCGGTAC 58.851 52.381 0.00 0.00 0.00 3.34
552 553 1.725803 AAGGGTGTTTCTCCGGTACT 58.274 50.000 0.00 0.00 0.00 2.73
553 554 2.610438 AGGGTGTTTCTCCGGTACTA 57.390 50.000 0.00 0.00 0.00 1.82
554 555 2.174360 AGGGTGTTTCTCCGGTACTAC 58.826 52.381 0.00 0.00 0.00 2.73
555 556 2.174360 GGGTGTTTCTCCGGTACTACT 58.826 52.381 0.00 0.00 0.00 2.57
556 557 2.165234 GGGTGTTTCTCCGGTACTACTC 59.835 54.545 0.00 0.00 0.00 2.59
557 558 3.087781 GGTGTTTCTCCGGTACTACTCT 58.912 50.000 0.00 0.00 0.00 3.24
558 559 3.119566 GGTGTTTCTCCGGTACTACTCTG 60.120 52.174 0.00 0.00 0.00 3.35
559 560 2.490903 TGTTTCTCCGGTACTACTCTGC 59.509 50.000 0.00 0.00 0.00 4.26
560 561 2.754002 GTTTCTCCGGTACTACTCTGCT 59.246 50.000 0.00 0.00 0.00 4.24
561 562 3.920231 TTCTCCGGTACTACTCTGCTA 57.080 47.619 0.00 0.00 0.00 3.49
562 563 3.920231 TCTCCGGTACTACTCTGCTAA 57.080 47.619 0.00 0.00 0.00 3.09
563 564 4.226427 TCTCCGGTACTACTCTGCTAAA 57.774 45.455 0.00 0.00 0.00 1.85
564 565 4.592942 TCTCCGGTACTACTCTGCTAAAA 58.407 43.478 0.00 0.00 0.00 1.52
594 595 2.362736 TGGTGCAGTAGACCGTAGTAG 58.637 52.381 0.00 0.00 36.12 2.57
595 596 2.290514 TGGTGCAGTAGACCGTAGTAGT 60.291 50.000 0.00 0.00 36.12 2.73
599 600 4.034975 GTGCAGTAGACCGTAGTAGTAAGG 59.965 50.000 7.91 7.91 34.16 2.69
600 601 4.080919 TGCAGTAGACCGTAGTAGTAAGGA 60.081 45.833 15.55 0.00 32.42 3.36
601 602 4.878397 GCAGTAGACCGTAGTAGTAAGGAA 59.122 45.833 15.55 0.00 32.42 3.36
602 603 5.355350 GCAGTAGACCGTAGTAGTAAGGAAA 59.645 44.000 15.55 0.00 32.42 3.13
603 604 6.127897 GCAGTAGACCGTAGTAGTAAGGAAAA 60.128 42.308 15.55 0.00 32.42 2.29
604 605 7.575720 GCAGTAGACCGTAGTAGTAAGGAAAAA 60.576 40.741 15.55 0.00 32.42 1.94
631 632 4.621269 AGACCAGGTCTCACGGTT 57.379 55.556 17.31 0.00 38.71 4.44
632 633 3.759865 AGACCAGGTCTCACGGTTA 57.240 52.632 17.31 0.00 38.71 2.85
633 634 1.546961 AGACCAGGTCTCACGGTTAG 58.453 55.000 17.31 0.00 38.71 2.34
634 635 0.108756 GACCAGGTCTCACGGTTAGC 60.109 60.000 12.94 0.00 31.63 3.09
635 636 0.830444 ACCAGGTCTCACGGTTAGCA 60.830 55.000 0.00 0.00 0.00 3.49
636 637 0.108615 CCAGGTCTCACGGTTAGCAG 60.109 60.000 0.00 0.00 0.00 4.24
637 638 0.108615 CAGGTCTCACGGTTAGCAGG 60.109 60.000 0.00 0.00 0.00 4.85
638 639 0.542232 AGGTCTCACGGTTAGCAGGT 60.542 55.000 0.00 0.00 0.00 4.00
639 640 0.389948 GGTCTCACGGTTAGCAGGTG 60.390 60.000 0.00 0.00 0.00 4.00
640 641 0.601558 GTCTCACGGTTAGCAGGTGA 59.398 55.000 3.41 3.41 38.29 4.02
642 643 3.045518 TCACGGTTAGCAGGTGAGA 57.954 52.632 0.00 0.00 35.89 3.27
643 644 0.601558 TCACGGTTAGCAGGTGAGAC 59.398 55.000 0.00 0.00 35.89 3.36
644 645 0.389948 CACGGTTAGCAGGTGAGACC 60.390 60.000 0.00 0.00 38.99 3.85
645 646 1.218316 CGGTTAGCAGGTGAGACCC 59.782 63.158 0.00 0.00 39.75 4.46
646 647 1.218316 GGTTAGCAGGTGAGACCCG 59.782 63.158 0.00 0.00 39.75 5.28
647 648 1.542187 GGTTAGCAGGTGAGACCCGT 61.542 60.000 0.00 0.00 39.75 5.28
648 649 0.108756 GTTAGCAGGTGAGACCCGTC 60.109 60.000 0.00 0.00 39.75 4.79
649 650 1.255667 TTAGCAGGTGAGACCCGTCC 61.256 60.000 0.00 0.00 39.75 4.79
650 651 2.151307 TAGCAGGTGAGACCCGTCCT 62.151 60.000 0.00 0.00 39.75 3.85
651 652 2.973899 CAGGTGAGACCCGTCCTG 59.026 66.667 0.00 0.00 39.75 3.86
652 653 2.851801 AGGTGAGACCCGTCCTGA 59.148 61.111 0.00 0.00 39.75 3.86
653 654 1.388531 AGGTGAGACCCGTCCTGAT 59.611 57.895 0.00 0.00 39.75 2.90
654 655 0.972983 AGGTGAGACCCGTCCTGATG 60.973 60.000 0.00 0.00 39.75 3.07
655 656 1.517832 GTGAGACCCGTCCTGATGG 59.482 63.158 0.00 0.00 37.23 3.51
656 657 0.970937 GTGAGACCCGTCCTGATGGA 60.971 60.000 6.98 0.00 39.90 3.41
657 658 0.032117 TGAGACCCGTCCTGATGGAT 60.032 55.000 6.98 0.00 45.29 3.41
658 659 0.390860 GAGACCCGTCCTGATGGATG 59.609 60.000 6.98 0.00 45.29 3.51
665 666 1.645034 GTCCTGATGGATGACACGTG 58.355 55.000 15.48 15.48 45.29 4.49
666 667 1.066858 GTCCTGATGGATGACACGTGT 60.067 52.381 23.64 23.64 45.29 4.49
667 668 1.204704 TCCTGATGGATGACACGTGTC 59.795 52.381 36.01 36.01 40.37 3.67
679 680 4.466567 GACACGTGTCATTCACAAATCA 57.533 40.909 37.16 0.00 46.44 2.57
680 681 4.209452 ACACGTGTCATTCACAAATCAC 57.791 40.909 17.22 0.00 46.44 3.06
681 682 3.625313 ACACGTGTCATTCACAAATCACA 59.375 39.130 17.22 0.00 46.44 3.58
682 683 4.095632 ACACGTGTCATTCACAAATCACAA 59.904 37.500 17.22 0.00 46.44 3.33
683 684 5.033507 CACGTGTCATTCACAAATCACAAA 58.966 37.500 7.58 0.00 46.44 2.83
684 685 5.171874 CACGTGTCATTCACAAATCACAAAG 59.828 40.000 7.58 0.00 46.44 2.77
685 686 4.146961 CGTGTCATTCACAAATCACAAAGC 59.853 41.667 0.00 0.00 46.44 3.51
686 687 5.042593 GTGTCATTCACAAATCACAAAGCA 58.957 37.500 0.00 0.00 45.51 3.91
687 688 5.693104 GTGTCATTCACAAATCACAAAGCAT 59.307 36.000 0.00 0.00 45.51 3.79
688 689 5.921976 TGTCATTCACAAATCACAAAGCATC 59.078 36.000 0.00 0.00 29.30 3.91
689 690 6.154445 GTCATTCACAAATCACAAAGCATCT 58.846 36.000 0.00 0.00 0.00 2.90
690 691 7.040548 TGTCATTCACAAATCACAAAGCATCTA 60.041 33.333 0.00 0.00 29.30 1.98
691 692 7.809331 GTCATTCACAAATCACAAAGCATCTAA 59.191 33.333 0.00 0.00 0.00 2.10
692 693 8.525316 TCATTCACAAATCACAAAGCATCTAAT 58.475 29.630 0.00 0.00 0.00 1.73
693 694 8.804743 CATTCACAAATCACAAAGCATCTAATC 58.195 33.333 0.00 0.00 0.00 1.75
694 695 7.692460 TCACAAATCACAAAGCATCTAATCT 57.308 32.000 0.00 0.00 0.00 2.40
695 696 7.755591 TCACAAATCACAAAGCATCTAATCTC 58.244 34.615 0.00 0.00 0.00 2.75
696 697 6.971184 CACAAATCACAAAGCATCTAATCTCC 59.029 38.462 0.00 0.00 0.00 3.71
697 698 6.888632 ACAAATCACAAAGCATCTAATCTCCT 59.111 34.615 0.00 0.00 0.00 3.69
698 699 7.066766 ACAAATCACAAAGCATCTAATCTCCTC 59.933 37.037 0.00 0.00 0.00 3.71
699 700 5.946942 TCACAAAGCATCTAATCTCCTCT 57.053 39.130 0.00 0.00 0.00 3.69
700 701 5.911752 TCACAAAGCATCTAATCTCCTCTC 58.088 41.667 0.00 0.00 0.00 3.20
701 702 5.055812 CACAAAGCATCTAATCTCCTCTCC 58.944 45.833 0.00 0.00 0.00 3.71
702 703 4.968080 ACAAAGCATCTAATCTCCTCTCCT 59.032 41.667 0.00 0.00 0.00 3.69
703 704 5.070313 ACAAAGCATCTAATCTCCTCTCCTC 59.930 44.000 0.00 0.00 0.00 3.71
704 705 3.778265 AGCATCTAATCTCCTCTCCTCC 58.222 50.000 0.00 0.00 0.00 4.30
705 706 3.402366 AGCATCTAATCTCCTCTCCTCCT 59.598 47.826 0.00 0.00 0.00 3.69
706 707 3.511146 GCATCTAATCTCCTCTCCTCCTG 59.489 52.174 0.00 0.00 0.00 3.86
707 708 4.752590 GCATCTAATCTCCTCTCCTCCTGA 60.753 50.000 0.00 0.00 0.00 3.86
708 709 5.582953 CATCTAATCTCCTCTCCTCCTGAT 58.417 45.833 0.00 0.00 0.00 2.90
709 710 5.678142 TCTAATCTCCTCTCCTCCTGATT 57.322 43.478 0.00 0.00 0.00 2.57
710 711 6.036926 TCTAATCTCCTCTCCTCCTGATTT 57.963 41.667 0.00 0.00 0.00 2.17
711 712 6.448202 TCTAATCTCCTCTCCTCCTGATTTT 58.552 40.000 0.00 0.00 0.00 1.82
712 713 7.596407 TCTAATCTCCTCTCCTCCTGATTTTA 58.404 38.462 0.00 0.00 0.00 1.52
713 714 8.068110 TCTAATCTCCTCTCCTCCTGATTTTAA 58.932 37.037 0.00 0.00 0.00 1.52
714 715 6.745794 ATCTCCTCTCCTCCTGATTTTAAG 57.254 41.667 0.00 0.00 0.00 1.85
715 716 5.594777 TCTCCTCTCCTCCTGATTTTAAGT 58.405 41.667 0.00 0.00 0.00 2.24
716 717 5.423610 TCTCCTCTCCTCCTGATTTTAAGTG 59.576 44.000 0.00 0.00 0.00 3.16
717 718 4.471386 TCCTCTCCTCCTGATTTTAAGTGG 59.529 45.833 0.00 0.00 0.00 4.00
718 719 4.471386 CCTCTCCTCCTGATTTTAAGTGGA 59.529 45.833 0.00 0.00 0.00 4.02
719 720 5.396213 CCTCTCCTCCTGATTTTAAGTGGAG 60.396 48.000 0.00 0.00 42.72 3.86
722 723 4.576330 CTCCTGATTTTAAGTGGAGGGT 57.424 45.455 0.00 0.00 40.25 4.34
723 724 4.265073 CTCCTGATTTTAAGTGGAGGGTG 58.735 47.826 0.00 0.00 40.25 4.61
724 725 3.913799 TCCTGATTTTAAGTGGAGGGTGA 59.086 43.478 0.00 0.00 0.00 4.02
725 726 4.019321 TCCTGATTTTAAGTGGAGGGTGAG 60.019 45.833 0.00 0.00 0.00 3.51
726 727 4.019321 CCTGATTTTAAGTGGAGGGTGAGA 60.019 45.833 0.00 0.00 0.00 3.27
727 728 5.514834 CCTGATTTTAAGTGGAGGGTGAGAA 60.515 44.000 0.00 0.00 0.00 2.87
728 729 5.947663 TGATTTTAAGTGGAGGGTGAGAAA 58.052 37.500 0.00 0.00 0.00 2.52
729 730 6.552008 TGATTTTAAGTGGAGGGTGAGAAAT 58.448 36.000 0.00 0.00 0.00 2.17
730 731 6.434028 TGATTTTAAGTGGAGGGTGAGAAATG 59.566 38.462 0.00 0.00 0.00 2.32
731 732 2.206576 AAGTGGAGGGTGAGAAATGC 57.793 50.000 0.00 0.00 0.00 3.56
732 733 1.366319 AGTGGAGGGTGAGAAATGCT 58.634 50.000 0.00 0.00 0.00 3.79
733 734 1.707427 AGTGGAGGGTGAGAAATGCTT 59.293 47.619 0.00 0.00 0.00 3.91
734 735 2.108952 AGTGGAGGGTGAGAAATGCTTT 59.891 45.455 0.00 0.00 0.00 3.51
735 736 2.229784 GTGGAGGGTGAGAAATGCTTTG 59.770 50.000 0.00 0.00 0.00 2.77
736 737 2.158475 TGGAGGGTGAGAAATGCTTTGT 60.158 45.455 0.00 0.00 0.00 2.83
737 738 3.073798 TGGAGGGTGAGAAATGCTTTGTA 59.926 43.478 0.00 0.00 0.00 2.41
738 739 4.079253 GGAGGGTGAGAAATGCTTTGTAA 58.921 43.478 0.00 0.00 0.00 2.41
739 740 4.706962 GGAGGGTGAGAAATGCTTTGTAAT 59.293 41.667 0.00 0.00 0.00 1.89
740 741 5.185828 GGAGGGTGAGAAATGCTTTGTAATT 59.814 40.000 0.00 0.00 0.00 1.40
741 742 6.295292 GGAGGGTGAGAAATGCTTTGTAATTT 60.295 38.462 0.00 0.00 0.00 1.82
742 743 6.458210 AGGGTGAGAAATGCTTTGTAATTTG 58.542 36.000 0.00 0.00 0.00 2.32
743 744 6.041979 AGGGTGAGAAATGCTTTGTAATTTGT 59.958 34.615 0.00 0.00 0.00 2.83
744 745 6.146021 GGGTGAGAAATGCTTTGTAATTTGTG 59.854 38.462 0.00 0.00 0.00 3.33
745 746 6.922957 GGTGAGAAATGCTTTGTAATTTGTGA 59.077 34.615 0.00 0.00 0.00 3.58
746 747 7.437862 GGTGAGAAATGCTTTGTAATTTGTGAA 59.562 33.333 0.00 0.00 0.00 3.18
747 748 8.981647 GTGAGAAATGCTTTGTAATTTGTGAAT 58.018 29.630 0.00 0.00 0.00 2.57
748 749 8.980610 TGAGAAATGCTTTGTAATTTGTGAATG 58.019 29.630 0.00 0.00 0.00 2.67
749 750 7.799784 AGAAATGCTTTGTAATTTGTGAATGC 58.200 30.769 0.00 0.00 0.00 3.56
750 751 6.484818 AATGCTTTGTAATTTGTGAATGCC 57.515 33.333 0.00 0.00 0.00 4.40
751 752 4.953667 TGCTTTGTAATTTGTGAATGCCA 58.046 34.783 0.00 0.00 0.00 4.92
752 753 4.749099 TGCTTTGTAATTTGTGAATGCCAC 59.251 37.500 0.00 0.00 45.88 5.01
761 762 2.247311 GTGAATGCCACGTGTCATTC 57.753 50.000 33.99 33.99 45.24 2.67
764 765 3.056952 GAATGCCACGTGTCATTCATC 57.943 47.619 35.00 17.82 44.71 2.92
765 766 2.112380 ATGCCACGTGTCATTCATCA 57.888 45.000 15.65 0.00 0.00 3.07
766 767 1.441738 TGCCACGTGTCATTCATCAG 58.558 50.000 15.65 0.00 0.00 2.90
767 768 0.729116 GCCACGTGTCATTCATCAGG 59.271 55.000 15.65 0.00 0.00 3.86
768 769 1.675714 GCCACGTGTCATTCATCAGGA 60.676 52.381 15.65 0.00 0.00 3.86
769 770 2.910199 CCACGTGTCATTCATCAGGAT 58.090 47.619 15.65 0.00 0.00 3.24
770 771 2.610833 CCACGTGTCATTCATCAGGATG 59.389 50.000 15.65 2.84 40.09 3.51
771 772 2.610833 CACGTGTCATTCATCAGGATGG 59.389 50.000 7.58 0.00 39.24 3.51
772 773 2.216046 CGTGTCATTCATCAGGATGGG 58.784 52.381 9.25 0.88 39.24 4.00
773 774 2.420547 CGTGTCATTCATCAGGATGGGT 60.421 50.000 9.25 0.00 39.24 4.51
774 775 3.209410 GTGTCATTCATCAGGATGGGTC 58.791 50.000 9.25 0.00 39.24 4.46
775 776 3.117745 TGTCATTCATCAGGATGGGTCT 58.882 45.455 9.25 0.00 39.24 3.85
776 777 3.135348 TGTCATTCATCAGGATGGGTCTC 59.865 47.826 9.25 0.24 39.24 3.36
777 778 2.366590 TCATTCATCAGGATGGGTCTCG 59.633 50.000 9.25 0.00 39.24 4.04
778 779 2.159179 TTCATCAGGATGGGTCTCGA 57.841 50.000 9.25 0.00 39.24 4.04
779 780 1.697284 TCATCAGGATGGGTCTCGAG 58.303 55.000 5.93 5.93 39.24 4.04
780 781 1.063642 TCATCAGGATGGGTCTCGAGT 60.064 52.381 13.13 0.00 39.24 4.18
781 782 1.068281 CATCAGGATGGGTCTCGAGTG 59.932 57.143 13.13 0.36 36.16 3.51
782 783 0.331616 TCAGGATGGGTCTCGAGTGA 59.668 55.000 13.13 3.05 36.16 3.41
783 784 0.743688 CAGGATGGGTCTCGAGTGAG 59.256 60.000 13.13 0.00 43.99 3.51
784 785 4.019474 TCAGGATGGGTCTCGAGTGAGA 62.019 54.545 13.13 0.00 42.71 3.27
791 792 3.251332 TCTCGAGTGAGACCTGGTC 57.749 57.895 19.20 19.20 46.25 4.02
792 793 0.693622 TCTCGAGTGAGACCTGGTCT 59.306 55.000 28.70 28.70 46.25 3.85
793 794 1.074084 TCTCGAGTGAGACCTGGTCTT 59.926 52.381 28.90 14.71 46.25 3.01
794 795 2.305052 TCTCGAGTGAGACCTGGTCTTA 59.695 50.000 28.90 22.77 46.25 2.10
795 796 3.054287 TCTCGAGTGAGACCTGGTCTTAT 60.054 47.826 28.90 17.93 46.25 1.73
796 797 4.163649 TCTCGAGTGAGACCTGGTCTTATA 59.836 45.833 28.90 16.22 46.25 0.98
797 798 4.452825 TCGAGTGAGACCTGGTCTTATAG 58.547 47.826 28.90 18.81 43.53 1.31
798 799 4.163649 TCGAGTGAGACCTGGTCTTATAGA 59.836 45.833 28.90 20.46 43.53 1.98
799 800 4.882427 CGAGTGAGACCTGGTCTTATAGAA 59.118 45.833 28.90 9.44 43.53 2.10
800 801 5.533154 CGAGTGAGACCTGGTCTTATAGAAT 59.467 44.000 28.90 11.98 43.53 2.40
801 802 6.039941 CGAGTGAGACCTGGTCTTATAGAATT 59.960 42.308 28.90 4.96 43.53 2.17
802 803 7.354751 AGTGAGACCTGGTCTTATAGAATTC 57.645 40.000 28.90 14.14 43.53 2.17
803 804 7.129425 AGTGAGACCTGGTCTTATAGAATTCT 58.871 38.462 28.90 13.56 43.53 2.40
804 805 7.621683 AGTGAGACCTGGTCTTATAGAATTCTT 59.378 37.037 28.90 3.43 43.53 2.52
805 806 8.261522 GTGAGACCTGGTCTTATAGAATTCTTT 58.738 37.037 28.90 8.54 43.53 2.52
806 807 8.826765 TGAGACCTGGTCTTATAGAATTCTTTT 58.173 33.333 28.90 4.60 43.53 2.27
807 808 9.103861 GAGACCTGGTCTTATAGAATTCTTTTG 57.896 37.037 28.90 3.15 43.53 2.44
808 809 8.606830 AGACCTGGTCTTATAGAATTCTTTTGT 58.393 33.333 23.49 0.74 40.28 2.83
809 810 8.567285 ACCTGGTCTTATAGAATTCTTTTGTG 57.433 34.615 14.36 1.46 0.00 3.33
810 811 8.164070 ACCTGGTCTTATAGAATTCTTTTGTGT 58.836 33.333 14.36 0.00 0.00 3.72
811 812 9.667107 CCTGGTCTTATAGAATTCTTTTGTGTA 57.333 33.333 14.36 0.00 0.00 2.90
831 832 7.660112 TGTGTAGTAGTATCTTGAAACCGAAA 58.340 34.615 0.00 0.00 0.00 3.46
839 840 4.627284 TCTTGAAACCGAAAGATGGGTA 57.373 40.909 0.00 0.00 36.52 3.69
849 850 4.279169 CCGAAAGATGGGTAAATGCATGAT 59.721 41.667 0.00 0.00 0.00 2.45
850 851 5.217393 CGAAAGATGGGTAAATGCATGATG 58.783 41.667 0.00 0.00 0.00 3.07
851 852 5.008911 CGAAAGATGGGTAAATGCATGATGA 59.991 40.000 0.00 0.00 0.00 2.92
862 863 1.721487 CATGATGAACGCGGTTCCC 59.279 57.895 12.47 7.37 41.35 3.97
870 872 0.753867 AACGCGGTTCCCCAAAAATT 59.246 45.000 12.47 0.00 0.00 1.82
873 875 1.790755 GCGGTTCCCCAAAAATTCAC 58.209 50.000 0.00 0.00 0.00 3.18
874 876 1.343142 GCGGTTCCCCAAAAATTCACT 59.657 47.619 0.00 0.00 0.00 3.41
889 891 1.060937 CACTATGAACGCGCTTGCC 59.939 57.895 5.73 0.00 34.11 4.52
945 947 4.006319 AGCCTCTACTAAAAGCTTTGCTG 58.994 43.478 13.54 8.48 39.62 4.41
1356 1358 3.827898 CTCGACGCCCTGTCCTCC 61.828 72.222 0.00 0.00 45.23 4.30
1542 1544 4.292178 CTCCTCTCCGGCGCCATC 62.292 72.222 28.98 0.00 0.00 3.51
2347 2351 8.853077 AAAAACTTGTACTATAGGTTGGGTAC 57.147 34.615 4.43 0.00 36.19 3.34
2403 2432 2.637382 GAGAGAATCCTCCTCCATTCCC 59.363 54.545 0.00 0.00 40.30 3.97
2407 2436 3.050251 AGAATCCTCCTCCATTCCCCTTA 60.050 47.826 0.00 0.00 30.41 2.69
2415 2445 4.548250 TCCTCCATTCCCCTTAATTTTCCT 59.452 41.667 0.00 0.00 0.00 3.36
2416 2446 5.017323 TCCTCCATTCCCCTTAATTTTCCTT 59.983 40.000 0.00 0.00 0.00 3.36
2445 2475 1.466856 TGCCAGTGATTTCCATGAGC 58.533 50.000 0.00 0.00 0.00 4.26
2484 2517 6.116806 TGAAGTTTGGACTGTTAAGCTACAA 58.883 36.000 0.00 0.00 35.91 2.41
2485 2518 6.260050 TGAAGTTTGGACTGTTAAGCTACAAG 59.740 38.462 0.00 0.00 35.91 3.16
2486 2519 4.515567 AGTTTGGACTGTTAAGCTACAAGC 59.484 41.667 0.00 0.00 36.66 4.01
2487 2520 3.762407 TGGACTGTTAAGCTACAAGCA 57.238 42.857 1.22 0.00 45.56 3.91
2488 2521 3.399330 TGGACTGTTAAGCTACAAGCAC 58.601 45.455 1.22 0.00 45.56 4.40
2489 2522 3.071023 TGGACTGTTAAGCTACAAGCACT 59.929 43.478 1.22 0.00 45.56 4.40
2490 2523 4.065789 GGACTGTTAAGCTACAAGCACTT 58.934 43.478 1.22 0.00 45.56 3.16
2491 2524 4.515567 GGACTGTTAAGCTACAAGCACTTT 59.484 41.667 1.22 0.00 45.56 2.66
2492 2525 5.008712 GGACTGTTAAGCTACAAGCACTTTT 59.991 40.000 1.22 0.00 45.56 2.27
2493 2526 6.451064 ACTGTTAAGCTACAAGCACTTTTT 57.549 33.333 1.22 0.00 45.56 1.94
2588 2621 6.509418 TTTTTCGGATATTGTCTTTGGAGG 57.491 37.500 0.00 0.00 0.00 4.30
2589 2622 3.194005 TCGGATATTGTCTTTGGAGGC 57.806 47.619 0.00 0.00 0.00 4.70
2591 2624 2.222027 GGATATTGTCTTTGGAGGCCG 58.778 52.381 0.00 0.00 0.00 6.13
2592 2625 2.158813 GGATATTGTCTTTGGAGGCCGA 60.159 50.000 0.00 0.00 0.00 5.54
2593 2626 2.691409 TATTGTCTTTGGAGGCCGAG 57.309 50.000 0.00 0.00 0.00 4.63
2594 2627 0.678048 ATTGTCTTTGGAGGCCGAGC 60.678 55.000 0.00 0.00 0.00 5.03
2595 2628 1.768684 TTGTCTTTGGAGGCCGAGCT 61.769 55.000 0.00 0.00 0.00 4.09
2596 2629 1.448717 GTCTTTGGAGGCCGAGCTC 60.449 63.158 2.73 2.73 0.00 4.09
2597 2630 2.124942 CTTTGGAGGCCGAGCTCC 60.125 66.667 8.47 0.00 40.05 4.70
2598 2631 2.927856 TTTGGAGGCCGAGCTCCA 60.928 61.111 8.47 7.35 46.84 3.86
2601 2634 4.247380 GGAGGCCGAGCTCCATGG 62.247 72.222 4.97 4.97 39.45 3.66
2602 2635 3.157252 GAGGCCGAGCTCCATGGA 61.157 66.667 15.27 15.27 0.00 3.41
2603 2636 3.160047 AGGCCGAGCTCCATGGAG 61.160 66.667 33.73 33.73 44.56 3.86
2612 2645 3.558674 CTCCATGGAGCTCGGTTTT 57.441 52.632 28.45 0.00 35.31 2.43
2618 2651 3.056607 CCATGGAGCTCGGTTTTGAAAAT 60.057 43.478 5.56 0.00 0.00 1.82
2619 2652 4.559153 CATGGAGCTCGGTTTTGAAAATT 58.441 39.130 7.83 0.00 0.00 1.82
2620 2653 4.664150 TGGAGCTCGGTTTTGAAAATTT 57.336 36.364 7.83 0.00 0.00 1.82
2621 2654 5.017294 TGGAGCTCGGTTTTGAAAATTTT 57.983 34.783 7.83 2.28 0.00 1.82
2622 2655 4.808364 TGGAGCTCGGTTTTGAAAATTTTG 59.192 37.500 8.47 0.00 0.00 2.44
2623 2656 5.047188 GGAGCTCGGTTTTGAAAATTTTGA 58.953 37.500 8.47 0.00 0.00 2.69
2624 2657 5.522097 GGAGCTCGGTTTTGAAAATTTTGAA 59.478 36.000 8.47 3.01 0.00 2.69
2625 2658 6.202762 GGAGCTCGGTTTTGAAAATTTTGAAT 59.797 34.615 8.47 0.00 0.00 2.57
2626 2659 7.254761 GGAGCTCGGTTTTGAAAATTTTGAATT 60.255 33.333 8.47 0.00 0.00 2.17
2627 2660 7.984391 AGCTCGGTTTTGAAAATTTTGAATTT 58.016 26.923 8.47 0.00 0.00 1.82
2628 2661 8.458052 AGCTCGGTTTTGAAAATTTTGAATTTT 58.542 25.926 8.47 10.24 34.30 1.82
2629 2662 8.522661 GCTCGGTTTTGAAAATTTTGAATTTTG 58.477 29.630 8.47 0.00 32.03 2.44
2630 2663 8.387053 TCGGTTTTGAAAATTTTGAATTTTGC 57.613 26.923 8.47 8.05 32.03 3.68
2634 2667 9.138062 GTTTTGAAAATTTTGAATTTTGCCACT 57.862 25.926 8.47 0.00 32.03 4.00
2659 2842 2.206576 AGACTTGTGATTTGCTCCCC 57.793 50.000 0.00 0.00 0.00 4.81
2670 2853 3.056328 GCTCCCCCAGTTGCGAAC 61.056 66.667 0.00 0.00 0.00 3.95
2702 2885 4.668837 CCGACAACAAACTTAACATGAACG 59.331 41.667 0.00 0.00 0.00 3.95
2775 2958 2.745968 GGAATGTGATTTTGGCCCCTA 58.254 47.619 0.00 0.00 0.00 3.53
2850 3039 1.064505 CTTGACCAACACAGCACAGTG 59.935 52.381 0.00 0.00 44.93 3.66
2877 3066 1.301244 AGCTGCTCCTGTCGTGTTG 60.301 57.895 0.00 0.00 0.00 3.33
2942 3132 1.152694 ACAAGTGCACAGCCCACAT 60.153 52.632 21.04 0.00 35.69 3.21
3008 3202 4.568359 TCGTACTACTGCTCTTTACTACCG 59.432 45.833 0.00 0.00 0.00 4.02
3078 3272 1.133294 ACCACTCCCCCGTTCAATTTT 60.133 47.619 0.00 0.00 0.00 1.82
3079 3273 2.108601 ACCACTCCCCCGTTCAATTTTA 59.891 45.455 0.00 0.00 0.00 1.52
3080 3274 2.752903 CCACTCCCCCGTTCAATTTTAG 59.247 50.000 0.00 0.00 0.00 1.85
3081 3275 3.418047 CACTCCCCCGTTCAATTTTAGT 58.582 45.455 0.00 0.00 0.00 2.24
3082 3276 4.566070 CCACTCCCCCGTTCAATTTTAGTA 60.566 45.833 0.00 0.00 0.00 1.82
3083 3277 5.005094 CACTCCCCCGTTCAATTTTAGTAA 58.995 41.667 0.00 0.00 0.00 2.24
3084 3278 5.474189 CACTCCCCCGTTCAATTTTAGTAAA 59.526 40.000 0.00 0.00 0.00 2.01
3085 3279 5.708697 ACTCCCCCGTTCAATTTTAGTAAAG 59.291 40.000 0.00 0.00 0.00 1.85
3086 3280 5.633117 TCCCCCGTTCAATTTTAGTAAAGT 58.367 37.500 0.00 0.00 0.00 2.66
3087 3281 5.706833 TCCCCCGTTCAATTTTAGTAAAGTC 59.293 40.000 0.00 0.00 0.00 3.01
3088 3282 5.708697 CCCCCGTTCAATTTTAGTAAAGTCT 59.291 40.000 0.00 0.00 0.00 3.24
3089 3283 6.349033 CCCCCGTTCAATTTTAGTAAAGTCTG 60.349 42.308 0.00 0.00 0.00 3.51
3090 3284 6.428771 CCCCGTTCAATTTTAGTAAAGTCTGA 59.571 38.462 0.00 0.00 0.00 3.27
3091 3285 7.040961 CCCCGTTCAATTTTAGTAAAGTCTGAA 60.041 37.037 10.01 10.01 0.00 3.02
3092 3286 8.347035 CCCGTTCAATTTTAGTAAAGTCTGAAA 58.653 33.333 13.41 0.00 29.52 2.69
3093 3287 9.893305 CCGTTCAATTTTAGTAAAGTCTGAAAT 57.107 29.630 13.41 0.00 35.94 2.17
3103 3297 9.720769 TTAGTAAAGTCTGAAATAAACCCTGAG 57.279 33.333 0.00 0.00 0.00 3.35
3104 3298 7.974504 AGTAAAGTCTGAAATAAACCCTGAGA 58.025 34.615 0.00 0.00 0.00 3.27
3105 3299 8.606830 AGTAAAGTCTGAAATAAACCCTGAGAT 58.393 33.333 0.00 0.00 0.00 2.75
3106 3300 7.929941 AAAGTCTGAAATAAACCCTGAGATC 57.070 36.000 0.00 0.00 0.00 2.75
3107 3301 5.665459 AGTCTGAAATAAACCCTGAGATCG 58.335 41.667 0.00 0.00 0.00 3.69
3108 3302 5.187967 AGTCTGAAATAAACCCTGAGATCGT 59.812 40.000 0.00 0.00 0.00 3.73
3109 3303 6.380274 AGTCTGAAATAAACCCTGAGATCGTA 59.620 38.462 0.00 0.00 0.00 3.43
3110 3304 6.697892 GTCTGAAATAAACCCTGAGATCGTAG 59.302 42.308 0.00 0.00 0.00 3.51
3111 3305 6.605995 TCTGAAATAAACCCTGAGATCGTAGA 59.394 38.462 1.40 0.00 45.75 2.59
3112 3306 6.570692 TGAAATAAACCCTGAGATCGTAGAC 58.429 40.000 1.40 0.00 42.51 2.59
3113 3307 4.832590 ATAAACCCTGAGATCGTAGACG 57.167 45.455 0.00 0.00 42.51 4.18
3114 3308 0.739561 AACCCTGAGATCGTAGACGC 59.260 55.000 0.00 0.00 42.51 5.19
3115 3309 1.102222 ACCCTGAGATCGTAGACGCC 61.102 60.000 0.00 0.00 42.51 5.68
3116 3310 1.280142 CCTGAGATCGTAGACGCCG 59.720 63.158 0.00 0.00 42.51 6.46
3117 3311 1.158484 CCTGAGATCGTAGACGCCGA 61.158 60.000 0.00 0.00 42.51 5.54
3118 3312 0.042013 CTGAGATCGTAGACGCCGAC 60.042 60.000 0.00 0.00 42.51 4.79
3119 3313 1.083529 GAGATCGTAGACGCCGACG 60.084 63.158 0.00 0.00 42.51 5.12
3131 3325 1.643880 CGCCGACGTAAATAAACCCT 58.356 50.000 0.00 0.00 33.53 4.34
3132 3326 1.589779 CGCCGACGTAAATAAACCCTC 59.410 52.381 0.00 0.00 33.53 4.30
3133 3327 2.620242 GCCGACGTAAATAAACCCTCA 58.380 47.619 0.00 0.00 0.00 3.86
3134 3328 2.349580 GCCGACGTAAATAAACCCTCAC 59.650 50.000 0.00 0.00 0.00 3.51
3135 3329 3.853475 CCGACGTAAATAAACCCTCACT 58.147 45.455 0.00 0.00 0.00 3.41
3136 3330 4.248058 CCGACGTAAATAAACCCTCACTT 58.752 43.478 0.00 0.00 0.00 3.16
3137 3331 4.692155 CCGACGTAAATAAACCCTCACTTT 59.308 41.667 0.00 0.00 0.00 2.66
3138 3332 5.163923 CCGACGTAAATAAACCCTCACTTTC 60.164 44.000 0.00 0.00 0.00 2.62
3139 3333 5.406175 CGACGTAAATAAACCCTCACTTTCA 59.594 40.000 0.00 0.00 0.00 2.69
3140 3334 6.091713 CGACGTAAATAAACCCTCACTTTCAT 59.908 38.462 0.00 0.00 0.00 2.57
3141 3335 7.360607 CGACGTAAATAAACCCTCACTTTCATT 60.361 37.037 0.00 0.00 0.00 2.57
3142 3336 8.173542 ACGTAAATAAACCCTCACTTTCATTT 57.826 30.769 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.038618 GCGGGTTTGGATGGTTTCAC 60.039 55.000 0.00 0.00 0.00 3.18
24 25 6.073819 CCTGCAAATTTACACCAAACTAAAGC 60.074 38.462 0.00 0.00 0.00 3.51
26 27 7.113658 TCCTGCAAATTTACACCAAACTAAA 57.886 32.000 0.00 0.00 0.00 1.85
58 59 0.878416 TTTTTCTGACCAATCCGGCG 59.122 50.000 0.00 0.00 39.03 6.46
62 63 8.033038 GGTTACCTAAATTTTTCTGACCAATCC 58.967 37.037 0.00 0.00 0.00 3.01
66 67 6.016943 CACGGTTACCTAAATTTTTCTGACCA 60.017 38.462 0.00 0.00 0.00 4.02
71 72 6.301486 AGTCCACGGTTACCTAAATTTTTCT 58.699 36.000 0.00 0.00 0.00 2.52
73 74 8.462589 TTTAGTCCACGGTTACCTAAATTTTT 57.537 30.769 0.00 0.00 0.00 1.94
75 76 8.462589 TTTTTAGTCCACGGTTACCTAAATTT 57.537 30.769 0.00 0.00 30.28 1.82
82 83 6.259387 CCAGATATTTTTAGTCCACGGTTACC 59.741 42.308 0.00 0.00 0.00 2.85
115 116 2.355756 CCTCACCAAATCGATCGCAAAT 59.644 45.455 11.09 0.00 0.00 2.32
139 140 5.812286 TCCAGTAGCACCGTCTATATATCA 58.188 41.667 0.00 0.00 0.00 2.15
154 155 2.437413 CAAAAGTTCCCCTCCAGTAGC 58.563 52.381 0.00 0.00 0.00 3.58
158 159 2.381752 AACCAAAAGTTCCCCTCCAG 57.618 50.000 0.00 0.00 30.99 3.86
168 169 6.779860 ACATATGTACTCAGGAACCAAAAGT 58.220 36.000 6.56 0.00 0.00 2.66
169 170 8.197988 GTACATATGTACTCAGGAACCAAAAG 57.802 38.462 30.41 0.00 45.47 2.27
213 214 9.911138 AAATTTTTGACTTTTTGTTGAATTGCT 57.089 22.222 0.00 0.00 0.00 3.91
238 239 9.748708 CAATGAAAGGTCAAGTTAATTTCAGAA 57.251 29.630 5.12 0.00 41.60 3.02
239 240 8.912988 ACAATGAAAGGTCAAGTTAATTTCAGA 58.087 29.630 5.12 0.00 41.60 3.27
241 242 9.959749 GTACAATGAAAGGTCAAGTTAATTTCA 57.040 29.630 1.61 1.61 42.26 2.69
246 247 9.268268 CACTAGTACAATGAAAGGTCAAGTTAA 57.732 33.333 0.00 0.00 37.30 2.01
247 248 8.644216 TCACTAGTACAATGAAAGGTCAAGTTA 58.356 33.333 0.00 0.00 37.30 2.24
248 249 7.506114 TCACTAGTACAATGAAAGGTCAAGTT 58.494 34.615 0.00 0.00 37.30 2.66
249 250 7.015292 TCTCACTAGTACAATGAAAGGTCAAGT 59.985 37.037 0.00 0.00 37.30 3.16
250 251 7.378966 TCTCACTAGTACAATGAAAGGTCAAG 58.621 38.462 0.00 0.00 37.30 3.02
251 252 7.297936 TCTCACTAGTACAATGAAAGGTCAA 57.702 36.000 0.00 0.00 37.30 3.18
252 253 6.911250 TCTCACTAGTACAATGAAAGGTCA 57.089 37.500 0.00 0.00 38.41 4.02
253 254 8.603242 TTTTCTCACTAGTACAATGAAAGGTC 57.397 34.615 0.00 0.00 0.00 3.85
254 255 8.211629 ACTTTTCTCACTAGTACAATGAAAGGT 58.788 33.333 0.00 6.20 31.01 3.50
255 256 8.608844 ACTTTTCTCACTAGTACAATGAAAGG 57.391 34.615 0.00 5.64 0.00 3.11
258 259 9.607988 TGAAACTTTTCTCACTAGTACAATGAA 57.392 29.630 0.00 0.00 38.02 2.57
259 260 9.042008 GTGAAACTTTTCTCACTAGTACAATGA 57.958 33.333 0.00 0.00 39.11 2.57
260 261 8.826710 TGTGAAACTTTTCTCACTAGTACAATG 58.173 33.333 0.00 0.00 42.06 2.82
261 262 8.958119 TGTGAAACTTTTCTCACTAGTACAAT 57.042 30.769 0.00 0.00 42.06 2.71
262 263 8.780846 TTGTGAAACTTTTCTCACTAGTACAA 57.219 30.769 0.00 0.00 42.06 2.41
263 264 8.780846 TTTGTGAAACTTTTCTCACTAGTACA 57.219 30.769 0.00 0.00 42.06 2.90
266 267 9.010029 TCTTTTTGTGAAACTTTTCTCACTAGT 57.990 29.630 6.07 0.00 42.06 2.57
267 268 9.840427 TTCTTTTTGTGAAACTTTTCTCACTAG 57.160 29.630 6.07 0.00 42.06 2.57
269 270 9.196552 CTTTCTTTTTGTGAAACTTTTCTCACT 57.803 29.630 6.07 0.00 42.06 3.41
270 271 8.978539 ACTTTCTTTTTGTGAAACTTTTCTCAC 58.021 29.630 6.07 0.00 39.51 3.51
271 272 9.541143 AACTTTCTTTTTGTGAAACTTTTCTCA 57.459 25.926 3.48 3.23 38.46 3.27
273 274 8.988934 GGAACTTTCTTTTTGTGAAACTTTTCT 58.011 29.630 3.48 0.00 38.02 2.52
274 275 8.988934 AGGAACTTTCTTTTTGTGAAACTTTTC 58.011 29.630 0.00 0.00 31.84 2.29
275 276 8.902540 AGGAACTTTCTTTTTGTGAAACTTTT 57.097 26.923 0.00 0.00 31.84 2.27
276 277 8.367911 AGAGGAACTTTCTTTTTGTGAAACTTT 58.632 29.630 0.00 0.00 41.55 2.66
277 278 7.896811 AGAGGAACTTTCTTTTTGTGAAACTT 58.103 30.769 0.00 0.00 41.55 2.66
278 279 7.468141 AGAGGAACTTTCTTTTTGTGAAACT 57.532 32.000 0.00 0.00 41.55 2.66
279 280 8.435430 CAAAGAGGAACTTTCTTTTTGTGAAAC 58.565 33.333 5.30 0.00 45.66 2.78
280 281 8.364142 TCAAAGAGGAACTTTCTTTTTGTGAAA 58.636 29.630 11.19 0.00 45.66 2.69
281 282 7.812669 GTCAAAGAGGAACTTTCTTTTTGTGAA 59.187 33.333 11.19 0.00 45.66 3.18
282 283 7.176690 AGTCAAAGAGGAACTTTCTTTTTGTGA 59.823 33.333 11.19 0.00 45.66 3.58
283 284 7.315890 AGTCAAAGAGGAACTTTCTTTTTGTG 58.684 34.615 11.19 0.00 45.66 3.33
284 285 7.468141 AGTCAAAGAGGAACTTTCTTTTTGT 57.532 32.000 11.19 0.00 45.66 2.83
285 286 8.246871 AGAAGTCAAAGAGGAACTTTCTTTTTG 58.753 33.333 6.71 6.71 45.66 2.44
286 287 8.354711 AGAAGTCAAAGAGGAACTTTCTTTTT 57.645 30.769 0.00 0.00 45.66 1.94
287 288 7.946381 AGAAGTCAAAGAGGAACTTTCTTTT 57.054 32.000 0.00 0.00 45.66 2.27
288 289 7.946381 AAGAAGTCAAAGAGGAACTTTCTTT 57.054 32.000 0.00 0.00 45.66 2.52
289 290 7.946381 AAAGAAGTCAAAGAGGAACTTTCTT 57.054 32.000 0.00 0.00 45.66 2.52
290 291 7.946381 AAAAGAAGTCAAAGAGGAACTTTCT 57.054 32.000 0.00 0.00 45.66 2.52
319 320 9.260002 ACGCTATTTTGATTGAAAATTTGTCTT 57.740 25.926 0.00 0.00 40.73 3.01
320 321 8.702438 CACGCTATTTTGATTGAAAATTTGTCT 58.298 29.630 0.00 0.00 40.73 3.41
321 322 8.698854 TCACGCTATTTTGATTGAAAATTTGTC 58.301 29.630 0.00 0.00 40.73 3.18
322 323 8.586570 TCACGCTATTTTGATTGAAAATTTGT 57.413 26.923 0.00 0.00 40.73 2.83
327 328 9.340695 CACTATTCACGCTATTTTGATTGAAAA 57.659 29.630 0.00 0.00 37.93 2.29
328 329 8.726068 TCACTATTCACGCTATTTTGATTGAAA 58.274 29.630 0.00 0.00 0.00 2.69
329 330 8.175069 GTCACTATTCACGCTATTTTGATTGAA 58.825 33.333 0.00 0.00 0.00 2.69
330 331 7.201609 GGTCACTATTCACGCTATTTTGATTGA 60.202 37.037 0.00 0.00 0.00 2.57
331 332 6.907212 GGTCACTATTCACGCTATTTTGATTG 59.093 38.462 0.00 0.00 0.00 2.67
332 333 6.823689 AGGTCACTATTCACGCTATTTTGATT 59.176 34.615 0.00 0.00 0.00 2.57
333 334 6.349300 AGGTCACTATTCACGCTATTTTGAT 58.651 36.000 0.00 0.00 0.00 2.57
334 335 5.730550 AGGTCACTATTCACGCTATTTTGA 58.269 37.500 0.00 0.00 0.00 2.69
335 336 7.715265 ATAGGTCACTATTCACGCTATTTTG 57.285 36.000 0.00 0.00 36.51 2.44
336 337 9.998106 ATTATAGGTCACTATTCACGCTATTTT 57.002 29.630 0.00 0.00 40.35 1.82
339 340 8.407064 GCTATTATAGGTCACTATTCACGCTAT 58.593 37.037 1.12 0.00 40.35 2.97
340 341 7.392393 TGCTATTATAGGTCACTATTCACGCTA 59.608 37.037 1.12 0.00 40.35 4.26
341 342 6.208797 TGCTATTATAGGTCACTATTCACGCT 59.791 38.462 1.12 0.00 40.35 5.07
342 343 6.387465 TGCTATTATAGGTCACTATTCACGC 58.613 40.000 1.12 0.00 40.35 5.34
343 344 8.812147 TTTGCTATTATAGGTCACTATTCACG 57.188 34.615 1.12 0.00 40.35 4.35
374 375 9.734620 CATTGACTTCACATAGAAAAAGACAAA 57.265 29.630 0.00 0.00 37.11 2.83
375 376 8.902806 ACATTGACTTCACATAGAAAAAGACAA 58.097 29.630 0.00 0.00 37.63 3.18
376 377 8.450578 ACATTGACTTCACATAGAAAAAGACA 57.549 30.769 0.00 0.00 35.40 3.41
377 378 9.173939 CAACATTGACTTCACATAGAAAAAGAC 57.826 33.333 0.00 0.00 35.40 3.01
378 379 8.352201 CCAACATTGACTTCACATAGAAAAAGA 58.648 33.333 0.00 0.00 35.40 2.52
379 380 8.137437 ACCAACATTGACTTCACATAGAAAAAG 58.863 33.333 0.00 0.00 35.40 2.27
380 381 8.006298 ACCAACATTGACTTCACATAGAAAAA 57.994 30.769 0.00 0.00 35.40 1.94
381 382 7.581213 ACCAACATTGACTTCACATAGAAAA 57.419 32.000 0.00 0.00 35.40 2.29
382 383 7.581213 AACCAACATTGACTTCACATAGAAA 57.419 32.000 0.00 0.00 35.40 2.52
383 384 7.581213 AAACCAACATTGACTTCACATAGAA 57.419 32.000 0.00 0.00 34.41 2.10
384 385 7.581213 AAAACCAACATTGACTTCACATAGA 57.419 32.000 0.00 0.00 0.00 1.98
422 423 8.750298 ACTTGACTTACTTGTGCACTAGTATAT 58.250 33.333 32.04 24.84 34.98 0.86
423 424 8.118976 ACTTGACTTACTTGTGCACTAGTATA 57.881 34.615 32.04 23.15 34.98 1.47
424 425 6.994221 ACTTGACTTACTTGTGCACTAGTAT 58.006 36.000 32.04 22.50 34.98 2.12
425 426 6.401047 ACTTGACTTACTTGTGCACTAGTA 57.599 37.500 29.40 29.40 34.09 1.82
426 427 5.277857 ACTTGACTTACTTGTGCACTAGT 57.722 39.130 31.30 31.30 36.08 2.57
427 428 6.604735 AAACTTGACTTACTTGTGCACTAG 57.395 37.500 24.01 24.01 0.00 2.57
428 429 8.671384 ATTAAACTTGACTTACTTGTGCACTA 57.329 30.769 19.41 9.94 0.00 2.74
429 430 6.995511 TTAAACTTGACTTACTTGTGCACT 57.004 33.333 19.41 0.00 0.00 4.40
430 431 7.639945 AGATTAAACTTGACTTACTTGTGCAC 58.360 34.615 10.75 10.75 0.00 4.57
431 432 7.801716 AGATTAAACTTGACTTACTTGTGCA 57.198 32.000 0.00 0.00 0.00 4.57
500 501 9.729281 CCGTATGTATATAAACCTTAAATGGGT 57.271 33.333 0.00 0.00 38.94 4.51
501 502 9.169592 CCCGTATGTATATAAACCTTAAATGGG 57.830 37.037 0.00 0.00 0.00 4.00
502 503 9.947433 TCCCGTATGTATATAAACCTTAAATGG 57.053 33.333 0.00 0.00 0.00 3.16
504 505 9.662947 GCTCCCGTATGTATATAAACCTTAAAT 57.337 33.333 0.00 0.00 0.00 1.40
505 506 8.096414 GGCTCCCGTATGTATATAAACCTTAAA 58.904 37.037 0.00 0.00 0.00 1.52
506 507 7.235193 TGGCTCCCGTATGTATATAAACCTTAA 59.765 37.037 0.00 0.00 0.00 1.85
507 508 6.725369 TGGCTCCCGTATGTATATAAACCTTA 59.275 38.462 0.00 0.00 0.00 2.69
508 509 5.544948 TGGCTCCCGTATGTATATAAACCTT 59.455 40.000 0.00 0.00 0.00 3.50
509 510 5.088730 TGGCTCCCGTATGTATATAAACCT 58.911 41.667 0.00 0.00 0.00 3.50
510 511 5.410355 TGGCTCCCGTATGTATATAAACC 57.590 43.478 0.00 0.00 0.00 3.27
511 512 6.370718 CCTTTGGCTCCCGTATGTATATAAAC 59.629 42.308 0.00 0.00 0.00 2.01
512 513 6.469410 CCTTTGGCTCCCGTATGTATATAAA 58.531 40.000 0.00 0.00 0.00 1.40
513 514 5.046159 CCCTTTGGCTCCCGTATGTATATAA 60.046 44.000 0.00 0.00 0.00 0.98
514 515 4.468510 CCCTTTGGCTCCCGTATGTATATA 59.531 45.833 0.00 0.00 0.00 0.86
515 516 3.263425 CCCTTTGGCTCCCGTATGTATAT 59.737 47.826 0.00 0.00 0.00 0.86
516 517 2.635915 CCCTTTGGCTCCCGTATGTATA 59.364 50.000 0.00 0.00 0.00 1.47
517 518 1.420138 CCCTTTGGCTCCCGTATGTAT 59.580 52.381 0.00 0.00 0.00 2.29
518 519 0.834612 CCCTTTGGCTCCCGTATGTA 59.165 55.000 0.00 0.00 0.00 2.29
519 520 1.205460 ACCCTTTGGCTCCCGTATGT 61.205 55.000 0.00 0.00 33.59 2.29
520 521 0.748005 CACCCTTTGGCTCCCGTATG 60.748 60.000 0.00 0.00 33.59 2.39
521 522 1.205460 ACACCCTTTGGCTCCCGTAT 61.205 55.000 0.00 0.00 33.59 3.06
522 523 1.420532 AACACCCTTTGGCTCCCGTA 61.421 55.000 0.00 0.00 33.59 4.02
523 524 2.292785 AAACACCCTTTGGCTCCCGT 62.293 55.000 0.00 0.00 33.59 5.28
524 525 1.524008 GAAACACCCTTTGGCTCCCG 61.524 60.000 0.00 0.00 33.59 5.14
525 526 0.178961 AGAAACACCCTTTGGCTCCC 60.179 55.000 0.00 0.00 33.59 4.30
526 527 1.248486 GAGAAACACCCTTTGGCTCC 58.752 55.000 0.00 0.00 33.59 4.70
527 528 1.248486 GGAGAAACACCCTTTGGCTC 58.752 55.000 0.00 0.00 33.59 4.70
528 529 0.537371 CGGAGAAACACCCTTTGGCT 60.537 55.000 0.00 0.00 33.59 4.75
529 530 1.524008 CCGGAGAAACACCCTTTGGC 61.524 60.000 0.00 0.00 33.59 4.52
530 531 0.179001 ACCGGAGAAACACCCTTTGG 60.179 55.000 9.46 0.00 37.80 3.28
531 532 2.148768 GTACCGGAGAAACACCCTTTG 58.851 52.381 9.46 0.00 0.00 2.77
532 533 2.052468 AGTACCGGAGAAACACCCTTT 58.948 47.619 9.46 0.00 0.00 3.11
533 534 1.725803 AGTACCGGAGAAACACCCTT 58.274 50.000 9.46 0.00 0.00 3.95
534 535 2.174360 GTAGTACCGGAGAAACACCCT 58.826 52.381 9.46 0.00 0.00 4.34
535 536 2.165234 GAGTAGTACCGGAGAAACACCC 59.835 54.545 9.46 0.00 0.00 4.61
536 537 3.087781 AGAGTAGTACCGGAGAAACACC 58.912 50.000 9.46 0.00 0.00 4.16
537 538 3.672781 GCAGAGTAGTACCGGAGAAACAC 60.673 52.174 9.46 0.00 0.00 3.32
538 539 2.490903 GCAGAGTAGTACCGGAGAAACA 59.509 50.000 9.46 0.00 0.00 2.83
539 540 2.754002 AGCAGAGTAGTACCGGAGAAAC 59.246 50.000 9.46 0.37 0.00 2.78
540 541 3.083122 AGCAGAGTAGTACCGGAGAAA 57.917 47.619 9.46 0.00 0.00 2.52
541 542 2.803030 AGCAGAGTAGTACCGGAGAA 57.197 50.000 9.46 0.00 0.00 2.87
542 543 3.920231 TTAGCAGAGTAGTACCGGAGA 57.080 47.619 9.46 0.00 0.00 3.71
543 544 4.978083 TTTTAGCAGAGTAGTACCGGAG 57.022 45.455 9.46 0.00 0.00 4.63
563 564 5.105756 GGTCTACTGCACCAATAGCATTTTT 60.106 40.000 0.00 0.00 41.82 1.94
564 565 4.399303 GGTCTACTGCACCAATAGCATTTT 59.601 41.667 0.00 0.00 41.82 1.82
573 574 1.624336 ACTACGGTCTACTGCACCAA 58.376 50.000 0.00 0.00 32.89 3.67
574 575 2.290514 ACTACTACGGTCTACTGCACCA 60.291 50.000 0.00 0.00 32.89 4.17
614 615 1.546961 CTAACCGTGAGACCTGGTCT 58.453 55.000 28.70 28.70 46.42 3.85
615 616 0.108756 GCTAACCGTGAGACCTGGTC 60.109 60.000 19.20 19.20 34.11 4.02
616 617 0.830444 TGCTAACCGTGAGACCTGGT 60.830 55.000 0.00 0.00 37.68 4.00
617 618 0.108615 CTGCTAACCGTGAGACCTGG 60.109 60.000 0.00 0.00 0.00 4.45
618 619 0.108615 CCTGCTAACCGTGAGACCTG 60.109 60.000 0.00 0.00 0.00 4.00
619 620 0.542232 ACCTGCTAACCGTGAGACCT 60.542 55.000 0.00 0.00 0.00 3.85
620 621 0.389948 CACCTGCTAACCGTGAGACC 60.390 60.000 0.00 0.00 0.00 3.85
621 622 0.601558 TCACCTGCTAACCGTGAGAC 59.398 55.000 0.00 0.00 32.85 3.36
622 623 3.045518 TCACCTGCTAACCGTGAGA 57.954 52.632 0.00 0.00 32.85 3.27
623 624 3.425578 CTCACCTGCTAACCGTGAG 57.574 57.895 2.35 2.35 45.33 3.51
624 625 0.601558 GTCTCACCTGCTAACCGTGA 59.398 55.000 0.00 0.00 35.34 4.35
625 626 0.389948 GGTCTCACCTGCTAACCGTG 60.390 60.000 0.00 0.00 34.73 4.94
626 627 1.542187 GGGTCTCACCTGCTAACCGT 61.542 60.000 0.00 0.00 38.64 4.83
627 628 1.218316 GGGTCTCACCTGCTAACCG 59.782 63.158 0.00 0.00 38.64 4.44
628 629 1.218316 CGGGTCTCACCTGCTAACC 59.782 63.158 0.00 0.00 37.90 2.85
629 630 4.913126 CGGGTCTCACCTGCTAAC 57.087 61.111 0.00 0.00 37.90 2.34
635 636 0.972983 CATCAGGACGGGTCTCACCT 60.973 60.000 0.00 0.00 38.64 4.00
636 637 1.517832 CATCAGGACGGGTCTCACC 59.482 63.158 0.00 0.00 37.60 4.02
637 638 0.970937 TCCATCAGGACGGGTCTCAC 60.971 60.000 0.00 0.00 39.61 3.51
638 639 1.386550 TCCATCAGGACGGGTCTCA 59.613 57.895 0.00 0.00 39.61 3.27
639 640 4.356979 TCCATCAGGACGGGTCTC 57.643 61.111 0.00 0.00 39.61 3.36
646 647 2.991132 GACACGTGTCATCCATCAGGAC 60.991 54.545 37.16 11.22 44.18 3.85
647 648 1.204704 GACACGTGTCATCCATCAGGA 59.795 52.381 37.16 0.00 44.18 3.86
648 649 1.645034 GACACGTGTCATCCATCAGG 58.355 55.000 37.16 1.27 44.18 3.86
664 665 5.259832 TGCTTTGTGATTTGTGAATGACA 57.740 34.783 0.00 0.00 37.55 3.58
665 666 6.154445 AGATGCTTTGTGATTTGTGAATGAC 58.846 36.000 0.00 0.00 31.04 3.06
666 667 6.335471 AGATGCTTTGTGATTTGTGAATGA 57.665 33.333 0.00 0.00 0.00 2.57
667 668 8.697846 ATTAGATGCTTTGTGATTTGTGAATG 57.302 30.769 0.00 0.00 0.00 2.67
668 669 8.746530 AGATTAGATGCTTTGTGATTTGTGAAT 58.253 29.630 0.00 0.00 0.00 2.57
669 670 8.114331 AGATTAGATGCTTTGTGATTTGTGAA 57.886 30.769 0.00 0.00 0.00 3.18
670 671 7.148188 GGAGATTAGATGCTTTGTGATTTGTGA 60.148 37.037 0.00 0.00 0.00 3.58
671 672 6.971184 GGAGATTAGATGCTTTGTGATTTGTG 59.029 38.462 0.00 0.00 0.00 3.33
672 673 6.888632 AGGAGATTAGATGCTTTGTGATTTGT 59.111 34.615 0.00 0.00 0.00 2.83
673 674 7.282675 AGAGGAGATTAGATGCTTTGTGATTTG 59.717 37.037 0.00 0.00 0.00 2.32
674 675 7.344913 AGAGGAGATTAGATGCTTTGTGATTT 58.655 34.615 0.00 0.00 0.00 2.17
675 676 6.897986 AGAGGAGATTAGATGCTTTGTGATT 58.102 36.000 0.00 0.00 0.00 2.57
676 677 6.464180 GGAGAGGAGATTAGATGCTTTGTGAT 60.464 42.308 0.00 0.00 0.00 3.06
677 678 5.163364 GGAGAGGAGATTAGATGCTTTGTGA 60.163 44.000 0.00 0.00 0.00 3.58
678 679 5.055812 GGAGAGGAGATTAGATGCTTTGTG 58.944 45.833 0.00 0.00 0.00 3.33
679 680 4.968080 AGGAGAGGAGATTAGATGCTTTGT 59.032 41.667 0.00 0.00 0.00 2.83
680 681 5.511202 GGAGGAGAGGAGATTAGATGCTTTG 60.511 48.000 0.00 0.00 0.00 2.77
681 682 4.592778 GGAGGAGAGGAGATTAGATGCTTT 59.407 45.833 0.00 0.00 0.00 3.51
682 683 4.140710 AGGAGGAGAGGAGATTAGATGCTT 60.141 45.833 0.00 0.00 0.00 3.91
683 684 3.402366 AGGAGGAGAGGAGATTAGATGCT 59.598 47.826 0.00 0.00 0.00 3.79
684 685 3.511146 CAGGAGGAGAGGAGATTAGATGC 59.489 52.174 0.00 0.00 0.00 3.91
685 686 4.996793 TCAGGAGGAGAGGAGATTAGATG 58.003 47.826 0.00 0.00 0.00 2.90
686 687 5.883875 ATCAGGAGGAGAGGAGATTAGAT 57.116 43.478 0.00 0.00 0.00 1.98
687 688 5.678142 AATCAGGAGGAGAGGAGATTAGA 57.322 43.478 0.00 0.00 0.00 2.10
688 689 6.745794 AAAATCAGGAGGAGAGGAGATTAG 57.254 41.667 0.00 0.00 0.00 1.73
689 690 7.846823 ACTTAAAATCAGGAGGAGAGGAGATTA 59.153 37.037 0.00 0.00 0.00 1.75
690 691 6.676189 ACTTAAAATCAGGAGGAGAGGAGATT 59.324 38.462 0.00 0.00 0.00 2.40
691 692 6.099557 CACTTAAAATCAGGAGGAGAGGAGAT 59.900 42.308 0.00 0.00 0.00 2.75
692 693 5.423610 CACTTAAAATCAGGAGGAGAGGAGA 59.576 44.000 0.00 0.00 0.00 3.71
693 694 5.396213 CCACTTAAAATCAGGAGGAGAGGAG 60.396 48.000 0.00 0.00 0.00 3.69
694 695 4.471386 CCACTTAAAATCAGGAGGAGAGGA 59.529 45.833 0.00 0.00 0.00 3.71
695 696 4.471386 TCCACTTAAAATCAGGAGGAGAGG 59.529 45.833 0.00 0.00 0.00 3.69
696 697 5.669477 CTCCACTTAAAATCAGGAGGAGAG 58.331 45.833 0.00 0.00 41.65 3.20
697 698 5.683876 CTCCACTTAAAATCAGGAGGAGA 57.316 43.478 0.00 0.00 41.65 3.71
701 702 4.019321 TCACCCTCCACTTAAAATCAGGAG 60.019 45.833 0.00 0.00 44.26 3.69
702 703 3.913799 TCACCCTCCACTTAAAATCAGGA 59.086 43.478 0.00 0.00 0.00 3.86
703 704 4.019321 TCTCACCCTCCACTTAAAATCAGG 60.019 45.833 0.00 0.00 0.00 3.86
704 705 5.165961 TCTCACCCTCCACTTAAAATCAG 57.834 43.478 0.00 0.00 0.00 2.90
705 706 5.576563 TTCTCACCCTCCACTTAAAATCA 57.423 39.130 0.00 0.00 0.00 2.57
706 707 6.625960 GCATTTCTCACCCTCCACTTAAAATC 60.626 42.308 0.00 0.00 0.00 2.17
707 708 5.185828 GCATTTCTCACCCTCCACTTAAAAT 59.814 40.000 0.00 0.00 0.00 1.82
708 709 4.522789 GCATTTCTCACCCTCCACTTAAAA 59.477 41.667 0.00 0.00 0.00 1.52
709 710 4.079253 GCATTTCTCACCCTCCACTTAAA 58.921 43.478 0.00 0.00 0.00 1.52
710 711 3.330701 AGCATTTCTCACCCTCCACTTAA 59.669 43.478 0.00 0.00 0.00 1.85
711 712 2.912956 AGCATTTCTCACCCTCCACTTA 59.087 45.455 0.00 0.00 0.00 2.24
712 713 1.707427 AGCATTTCTCACCCTCCACTT 59.293 47.619 0.00 0.00 0.00 3.16
713 714 1.366319 AGCATTTCTCACCCTCCACT 58.634 50.000 0.00 0.00 0.00 4.00
714 715 2.206576 AAGCATTTCTCACCCTCCAC 57.793 50.000 0.00 0.00 0.00 4.02
715 716 2.158475 ACAAAGCATTTCTCACCCTCCA 60.158 45.455 0.00 0.00 35.03 3.86
716 717 2.519013 ACAAAGCATTTCTCACCCTCC 58.481 47.619 0.00 0.00 35.03 4.30
717 718 5.904362 ATTACAAAGCATTTCTCACCCTC 57.096 39.130 0.00 0.00 35.03 4.30
718 719 6.041979 ACAAATTACAAAGCATTTCTCACCCT 59.958 34.615 0.00 0.00 35.03 4.34
719 720 6.146021 CACAAATTACAAAGCATTTCTCACCC 59.854 38.462 0.00 0.00 35.03 4.61
720 721 6.922957 TCACAAATTACAAAGCATTTCTCACC 59.077 34.615 0.00 0.00 35.03 4.02
721 722 7.928908 TCACAAATTACAAAGCATTTCTCAC 57.071 32.000 0.00 0.00 35.03 3.51
722 723 8.980610 CATTCACAAATTACAAAGCATTTCTCA 58.019 29.630 0.00 0.00 35.03 3.27
723 724 7.953710 GCATTCACAAATTACAAAGCATTTCTC 59.046 33.333 0.00 0.00 35.03 2.87
724 725 7.095102 GGCATTCACAAATTACAAAGCATTTCT 60.095 33.333 0.00 0.00 35.03 2.52
725 726 7.017055 GGCATTCACAAATTACAAAGCATTTC 58.983 34.615 0.00 0.00 35.03 2.17
726 727 6.485984 TGGCATTCACAAATTACAAAGCATTT 59.514 30.769 0.00 0.00 40.26 2.32
727 728 5.996513 TGGCATTCACAAATTACAAAGCATT 59.003 32.000 0.00 0.00 0.00 3.56
728 729 5.409214 GTGGCATTCACAAATTACAAAGCAT 59.591 36.000 0.00 0.00 45.39 3.79
729 730 4.749099 GTGGCATTCACAAATTACAAAGCA 59.251 37.500 0.00 0.00 45.39 3.91
730 731 4.143347 CGTGGCATTCACAAATTACAAAGC 60.143 41.667 0.00 0.00 46.36 3.51
731 732 4.981674 ACGTGGCATTCACAAATTACAAAG 59.018 37.500 0.00 0.00 46.36 2.77
732 733 4.742167 CACGTGGCATTCACAAATTACAAA 59.258 37.500 7.95 0.00 46.36 2.83
733 734 4.202060 ACACGTGGCATTCACAAATTACAA 60.202 37.500 21.57 0.00 46.36 2.41
734 735 3.316588 ACACGTGGCATTCACAAATTACA 59.683 39.130 21.57 0.00 46.36 2.41
735 736 3.896122 ACACGTGGCATTCACAAATTAC 58.104 40.909 21.57 0.00 46.36 1.89
736 737 3.565902 TGACACGTGGCATTCACAAATTA 59.434 39.130 23.03 0.00 46.36 1.40
737 738 2.360483 TGACACGTGGCATTCACAAATT 59.640 40.909 23.03 0.00 46.36 1.82
738 739 1.952990 TGACACGTGGCATTCACAAAT 59.047 42.857 23.03 0.00 46.36 2.32
739 740 1.383523 TGACACGTGGCATTCACAAA 58.616 45.000 23.03 0.00 46.36 2.83
740 741 1.603456 ATGACACGTGGCATTCACAA 58.397 45.000 31.22 4.08 42.08 3.33
741 742 3.320823 ATGACACGTGGCATTCACA 57.679 47.368 31.22 4.96 42.08 3.58
747 748 1.441738 CTGATGAATGACACGTGGCA 58.558 50.000 29.28 29.28 37.54 4.92
748 749 0.729116 CCTGATGAATGACACGTGGC 59.271 55.000 21.57 19.24 0.00 5.01
749 750 2.385013 TCCTGATGAATGACACGTGG 57.615 50.000 21.57 1.66 0.00 4.94
750 751 2.610833 CCATCCTGATGAATGACACGTG 59.389 50.000 15.48 15.48 41.20 4.49
751 752 2.420547 CCCATCCTGATGAATGACACGT 60.421 50.000 8.69 0.00 41.20 4.49
752 753 2.216046 CCCATCCTGATGAATGACACG 58.784 52.381 8.69 0.00 41.20 4.49
753 754 3.118112 AGACCCATCCTGATGAATGACAC 60.118 47.826 8.69 0.00 41.20 3.67
754 755 3.117745 AGACCCATCCTGATGAATGACA 58.882 45.455 8.69 0.00 41.20 3.58
755 756 3.737850 GAGACCCATCCTGATGAATGAC 58.262 50.000 8.69 0.00 41.20 3.06
756 757 2.366590 CGAGACCCATCCTGATGAATGA 59.633 50.000 8.69 0.00 41.20 2.57
757 758 2.366590 TCGAGACCCATCCTGATGAATG 59.633 50.000 8.69 0.25 41.20 2.67
758 759 2.632028 CTCGAGACCCATCCTGATGAAT 59.368 50.000 6.58 0.00 41.20 2.57
759 760 2.034878 CTCGAGACCCATCCTGATGAA 58.965 52.381 6.58 0.00 41.20 2.57
760 761 1.063642 ACTCGAGACCCATCCTGATGA 60.064 52.381 21.68 0.00 41.20 2.92
761 762 1.068281 CACTCGAGACCCATCCTGATG 59.932 57.143 21.68 0.00 38.51 3.07
762 763 1.063642 TCACTCGAGACCCATCCTGAT 60.064 52.381 21.68 0.00 0.00 2.90
763 764 0.331616 TCACTCGAGACCCATCCTGA 59.668 55.000 21.68 6.73 0.00 3.86
764 765 0.743688 CTCACTCGAGACCCATCCTG 59.256 60.000 21.68 4.08 42.34 3.86
765 766 0.626382 TCTCACTCGAGACCCATCCT 59.374 55.000 21.68 0.00 43.55 3.24
766 767 3.192799 TCTCACTCGAGACCCATCC 57.807 57.895 21.68 0.00 43.55 3.51
773 774 0.693622 AGACCAGGTCTCACTCGAGA 59.306 55.000 21.68 0.00 46.28 4.04
774 775 1.540267 AAGACCAGGTCTCACTCGAG 58.460 55.000 23.17 11.84 42.59 4.04
775 776 2.873094 TAAGACCAGGTCTCACTCGA 57.127 50.000 23.17 1.72 42.59 4.04
776 777 4.452825 TCTATAAGACCAGGTCTCACTCG 58.547 47.826 23.17 10.45 42.59 4.18
777 778 6.969993 ATTCTATAAGACCAGGTCTCACTC 57.030 41.667 23.17 0.00 42.59 3.51
778 779 7.129425 AGAATTCTATAAGACCAGGTCTCACT 58.871 38.462 23.17 10.03 42.59 3.41
779 780 7.354751 AGAATTCTATAAGACCAGGTCTCAC 57.645 40.000 23.17 6.66 42.59 3.51
780 781 7.979786 AAGAATTCTATAAGACCAGGTCTCA 57.020 36.000 23.17 9.12 42.59 3.27
781 782 9.103861 CAAAAGAATTCTATAAGACCAGGTCTC 57.896 37.037 23.17 7.06 42.59 3.36
782 783 8.606830 ACAAAAGAATTCTATAAGACCAGGTCT 58.393 33.333 17.31 17.31 45.64 3.85
783 784 8.669243 CACAAAAGAATTCTATAAGACCAGGTC 58.331 37.037 12.25 12.25 0.00 3.85
784 785 8.164070 ACACAAAAGAATTCTATAAGACCAGGT 58.836 33.333 8.75 0.00 0.00 4.00
785 786 8.567285 ACACAAAAGAATTCTATAAGACCAGG 57.433 34.615 8.75 0.00 0.00 4.45
801 802 9.485206 GGTTTCAAGATACTACTACACAAAAGA 57.515 33.333 0.00 0.00 0.00 2.52
802 803 8.433126 CGGTTTCAAGATACTACTACACAAAAG 58.567 37.037 0.00 0.00 0.00 2.27
803 804 8.143193 TCGGTTTCAAGATACTACTACACAAAA 58.857 33.333 0.00 0.00 0.00 2.44
804 805 7.660112 TCGGTTTCAAGATACTACTACACAAA 58.340 34.615 0.00 0.00 0.00 2.83
805 806 7.218228 TCGGTTTCAAGATACTACTACACAA 57.782 36.000 0.00 0.00 0.00 3.33
806 807 6.822667 TCGGTTTCAAGATACTACTACACA 57.177 37.500 0.00 0.00 0.00 3.72
807 808 8.025445 TCTTTCGGTTTCAAGATACTACTACAC 58.975 37.037 0.00 0.00 0.00 2.90
808 809 8.114331 TCTTTCGGTTTCAAGATACTACTACA 57.886 34.615 0.00 0.00 0.00 2.74
809 810 9.021863 CATCTTTCGGTTTCAAGATACTACTAC 57.978 37.037 0.00 0.00 37.60 2.73
810 811 8.195436 CCATCTTTCGGTTTCAAGATACTACTA 58.805 37.037 0.00 0.00 37.60 1.82
811 812 7.042335 CCATCTTTCGGTTTCAAGATACTACT 58.958 38.462 0.00 0.00 37.60 2.57
812 813 6.258068 CCCATCTTTCGGTTTCAAGATACTAC 59.742 42.308 0.00 0.00 37.60 2.73
813 814 6.070424 ACCCATCTTTCGGTTTCAAGATACTA 60.070 38.462 0.00 0.00 37.60 1.82
831 832 4.276678 CGTTCATCATGCATTTACCCATCT 59.723 41.667 0.00 0.00 0.00 2.90
839 840 0.810648 ACCGCGTTCATCATGCATTT 59.189 45.000 4.92 0.00 37.23 2.32
862 863 3.300590 GCGCGTTCATAGTGAATTTTTGG 59.699 43.478 8.43 0.00 38.79 3.28
870 872 1.358725 GGCAAGCGCGTTCATAGTGA 61.359 55.000 8.43 0.00 39.92 3.41
873 875 2.709475 GGGCAAGCGCGTTCATAG 59.291 61.111 8.43 0.00 39.92 2.23
874 876 3.192230 CGGGCAAGCGCGTTCATA 61.192 61.111 21.18 0.00 45.30 2.15
889 891 0.678684 AATGGCCGTTTTACCCTCGG 60.679 55.000 3.71 0.00 45.94 4.63
896 898 4.500035 GGAGTGTTCAAAATGGCCGTTTTA 60.500 41.667 30.45 16.77 30.56 1.52
945 947 1.445238 GAGTGGAGTGAGCTCGCAC 60.445 63.158 28.02 21.74 42.53 5.34
1356 1358 2.415010 CAGTCGGCGAGGATGAGG 59.585 66.667 11.20 0.00 0.00 3.86
1542 1544 4.247380 GAGGCGATGGAGCTGGGG 62.247 72.222 0.00 0.00 37.29 4.96
1680 1682 3.171388 ATGGACGGAGGGATGGGC 61.171 66.667 0.00 0.00 0.00 5.36
1842 1844 1.077858 CTTCTCCCCCAGCAGCTTC 60.078 63.158 0.00 0.00 0.00 3.86
1856 1858 3.905678 CGATCGCGAGCCCCTTCT 61.906 66.667 19.98 0.00 40.82 2.85
2019 2021 2.358737 CGGTTGTGGCTGAGGTCC 60.359 66.667 0.00 0.00 0.00 4.46
2192 2194 2.475022 GCGCCACGGTAGTAAAAATCAC 60.475 50.000 0.00 0.00 0.00 3.06
2271 2273 0.179018 ACAGTTGGCACTTGGACCTC 60.179 55.000 0.00 0.00 0.00 3.85
2347 2351 4.209288 CGGCAGTACATTTATCTTCTTCCG 59.791 45.833 0.00 0.00 0.00 4.30
2423 2453 3.841643 CTCATGGAAATCACTGGCAAAC 58.158 45.455 0.00 0.00 0.00 2.93
2445 2475 2.881074 ACTTCATAGTAGCAGCACACG 58.119 47.619 0.00 0.00 31.21 4.49
2453 2483 7.413109 GCTTAACAGTCCAAACTTCATAGTAGC 60.413 40.741 0.00 0.00 33.17 3.58
2492 2525 1.584175 CAAGTGCTGCCATGCAAAAA 58.416 45.000 0.00 0.00 45.12 1.94
2493 2526 0.249953 CCAAGTGCTGCCATGCAAAA 60.250 50.000 0.00 0.00 45.12 2.44
2494 2527 1.368209 CCAAGTGCTGCCATGCAAA 59.632 52.632 0.00 0.00 45.12 3.68
2495 2528 3.052954 CCAAGTGCTGCCATGCAA 58.947 55.556 0.00 0.00 45.12 4.08
2496 2529 3.687102 GCCAAGTGCTGCCATGCA 61.687 61.111 0.00 0.00 41.05 3.96
2497 2530 4.789075 CGCCAAGTGCTGCCATGC 62.789 66.667 0.00 0.00 38.05 4.06
2498 2531 4.789075 GCGCCAAGTGCTGCCATG 62.789 66.667 0.00 0.00 38.05 3.66
2568 2601 3.541632 GCCTCCAAAGACAATATCCGAA 58.458 45.455 0.00 0.00 0.00 4.30
2571 2604 2.158813 TCGGCCTCCAAAGACAATATCC 60.159 50.000 0.00 0.00 0.00 2.59
2572 2605 3.134458 CTCGGCCTCCAAAGACAATATC 58.866 50.000 0.00 0.00 0.00 1.63
2575 2608 0.678048 GCTCGGCCTCCAAAGACAAT 60.678 55.000 0.00 0.00 0.00 2.71
2576 2609 1.302511 GCTCGGCCTCCAAAGACAA 60.303 57.895 0.00 0.00 0.00 3.18
2578 2611 1.448717 GAGCTCGGCCTCCAAAGAC 60.449 63.158 0.00 0.00 0.00 3.01
2579 2612 2.982130 GAGCTCGGCCTCCAAAGA 59.018 61.111 0.00 0.00 0.00 2.52
2585 2618 3.157252 TCCATGGAGCTCGGCCTC 61.157 66.667 11.44 0.00 0.00 4.70
2594 2627 1.089920 CAAAACCGAGCTCCATGGAG 58.910 55.000 33.73 33.73 44.56 3.86
2595 2628 0.690192 TCAAAACCGAGCTCCATGGA 59.310 50.000 15.27 15.27 0.00 3.41
2596 2629 1.533625 TTCAAAACCGAGCTCCATGG 58.466 50.000 4.97 4.97 0.00 3.66
2597 2630 3.641437 TTTTCAAAACCGAGCTCCATG 57.359 42.857 8.47 0.00 0.00 3.66
2598 2631 4.871933 AATTTTCAAAACCGAGCTCCAT 57.128 36.364 8.47 0.00 0.00 3.41
2601 2634 6.582437 TTCAAAATTTTCAAAACCGAGCTC 57.418 33.333 2.73 2.73 0.00 4.09
2602 2635 7.552458 AATTCAAAATTTTCAAAACCGAGCT 57.448 28.000 0.00 0.00 0.00 4.09
2603 2636 8.522661 CAAAATTCAAAATTTTCAAAACCGAGC 58.477 29.630 0.00 0.00 0.00 5.03
2604 2637 8.522661 GCAAAATTCAAAATTTTCAAAACCGAG 58.477 29.630 0.00 0.00 0.00 4.63
2605 2638 7.486232 GGCAAAATTCAAAATTTTCAAAACCGA 59.514 29.630 0.00 0.00 0.00 4.69
2607 2640 8.379161 GTGGCAAAATTCAAAATTTTCAAAACC 58.621 29.630 0.00 5.82 0.00 3.27
2608 2641 9.138062 AGTGGCAAAATTCAAAATTTTCAAAAC 57.862 25.926 0.00 5.11 0.00 2.43
2620 2653 9.474920 CAAGTCTAAAATAGTGGCAAAATTCAA 57.525 29.630 0.00 0.00 0.00 2.69
2621 2654 8.637986 ACAAGTCTAAAATAGTGGCAAAATTCA 58.362 29.630 0.00 0.00 0.00 2.57
2622 2655 8.915654 CACAAGTCTAAAATAGTGGCAAAATTC 58.084 33.333 0.00 0.00 0.00 2.17
2623 2656 8.637986 TCACAAGTCTAAAATAGTGGCAAAATT 58.362 29.630 0.00 0.00 0.00 1.82
2624 2657 8.177119 TCACAAGTCTAAAATAGTGGCAAAAT 57.823 30.769 0.00 0.00 0.00 1.82
2625 2658 7.575414 TCACAAGTCTAAAATAGTGGCAAAA 57.425 32.000 0.00 0.00 0.00 2.44
2626 2659 7.759489 ATCACAAGTCTAAAATAGTGGCAAA 57.241 32.000 0.00 0.00 0.00 3.68
2627 2660 7.759489 AATCACAAGTCTAAAATAGTGGCAA 57.241 32.000 0.00 0.00 0.00 4.52
2628 2661 7.592938 CAAATCACAAGTCTAAAATAGTGGCA 58.407 34.615 0.00 0.00 0.00 4.92
2629 2662 6.528072 GCAAATCACAAGTCTAAAATAGTGGC 59.472 38.462 0.00 0.00 0.00 5.01
2630 2663 7.820648 AGCAAATCACAAGTCTAAAATAGTGG 58.179 34.615 0.00 0.00 0.00 4.00
2634 2667 6.377146 GGGGAGCAAATCACAAGTCTAAAATA 59.623 38.462 0.00 0.00 30.31 1.40
2645 2828 0.482446 AACTGGGGGAGCAAATCACA 59.518 50.000 0.00 0.00 30.31 3.58
2775 2958 7.176690 CCTGAAAACTGGTGGAAGTAATTACAT 59.823 37.037 17.65 5.66 0.00 2.29
2877 3066 6.416455 TCAAATAGTTTTTCGTGTGTTCATGC 59.584 34.615 0.00 0.00 0.00 4.06
3046 3240 2.171003 GGGAGTGGTCCAAAATTCCAG 58.829 52.381 12.51 0.00 46.07 3.86
3078 3272 9.096823 TCTCAGGGTTTATTTCAGACTTTACTA 57.903 33.333 0.00 0.00 0.00 1.82
3079 3273 7.974504 TCTCAGGGTTTATTTCAGACTTTACT 58.025 34.615 0.00 0.00 0.00 2.24
3080 3274 8.794335 ATCTCAGGGTTTATTTCAGACTTTAC 57.206 34.615 0.00 0.00 0.00 2.01
3081 3275 7.764443 CGATCTCAGGGTTTATTTCAGACTTTA 59.236 37.037 0.00 0.00 0.00 1.85
3082 3276 6.595716 CGATCTCAGGGTTTATTTCAGACTTT 59.404 38.462 0.00 0.00 0.00 2.66
3083 3277 6.109359 CGATCTCAGGGTTTATTTCAGACTT 58.891 40.000 0.00 0.00 0.00 3.01
3084 3278 5.187967 ACGATCTCAGGGTTTATTTCAGACT 59.812 40.000 0.00 0.00 0.00 3.24
3085 3279 5.420409 ACGATCTCAGGGTTTATTTCAGAC 58.580 41.667 0.00 0.00 0.00 3.51
3086 3280 5.677319 ACGATCTCAGGGTTTATTTCAGA 57.323 39.130 0.00 0.00 0.00 3.27
3087 3281 6.697892 GTCTACGATCTCAGGGTTTATTTCAG 59.302 42.308 0.00 0.00 0.00 3.02
3088 3282 6.570692 GTCTACGATCTCAGGGTTTATTTCA 58.429 40.000 0.00 0.00 0.00 2.69
3089 3283 5.686397 CGTCTACGATCTCAGGGTTTATTTC 59.314 44.000 0.00 0.00 43.02 2.17
3090 3284 5.589192 CGTCTACGATCTCAGGGTTTATTT 58.411 41.667 0.00 0.00 43.02 1.40
3091 3285 4.499357 GCGTCTACGATCTCAGGGTTTATT 60.499 45.833 6.71 0.00 43.02 1.40
3092 3286 3.004524 GCGTCTACGATCTCAGGGTTTAT 59.995 47.826 6.71 0.00 43.02 1.40
3093 3287 2.357009 GCGTCTACGATCTCAGGGTTTA 59.643 50.000 6.71 0.00 43.02 2.01
3094 3288 1.134560 GCGTCTACGATCTCAGGGTTT 59.865 52.381 6.71 0.00 43.02 3.27
3095 3289 0.739561 GCGTCTACGATCTCAGGGTT 59.260 55.000 6.71 0.00 43.02 4.11
3096 3290 1.102222 GGCGTCTACGATCTCAGGGT 61.102 60.000 6.71 0.00 43.02 4.34
3097 3291 1.655329 GGCGTCTACGATCTCAGGG 59.345 63.158 6.71 0.00 43.02 4.45
3098 3292 1.158484 TCGGCGTCTACGATCTCAGG 61.158 60.000 6.85 0.00 43.02 3.86
3099 3293 0.042013 GTCGGCGTCTACGATCTCAG 60.042 60.000 6.85 0.00 42.82 3.35
3100 3294 1.759293 CGTCGGCGTCTACGATCTCA 61.759 60.000 8.56 0.00 42.82 3.27
3101 3295 1.083529 CGTCGGCGTCTACGATCTC 60.084 63.158 8.56 0.00 42.82 2.75
3102 3296 3.012399 CGTCGGCGTCTACGATCT 58.988 61.111 8.56 0.00 42.82 2.75
3112 3306 1.589779 GAGGGTTTATTTACGTCGGCG 59.410 52.381 8.42 8.42 44.93 6.46
3113 3307 2.349580 GTGAGGGTTTATTTACGTCGGC 59.650 50.000 0.00 0.00 0.00 5.54
3114 3308 3.853475 AGTGAGGGTTTATTTACGTCGG 58.147 45.455 0.00 0.00 0.00 4.79
3115 3309 5.406175 TGAAAGTGAGGGTTTATTTACGTCG 59.594 40.000 0.00 0.00 0.00 5.12
3116 3310 6.790285 TGAAAGTGAGGGTTTATTTACGTC 57.210 37.500 0.00 0.00 0.00 4.34
3117 3311 7.754851 AATGAAAGTGAGGGTTTATTTACGT 57.245 32.000 0.00 0.00 0.00 3.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.