Multiple sequence alignment - TraesCS7A01G213400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G213400 | chr7A | 100.000 | 2949 | 0 | 0 | 1 | 2949 | 177135007 | 177137955 | 0.000000e+00 | 5446.0 |
1 | TraesCS7A01G213400 | chr7A | 93.266 | 297 | 18 | 1 | 2205 | 2499 | 167863620 | 167863324 | 1.260000e-118 | 436.0 |
2 | TraesCS7A01G213400 | chr7D | 94.317 | 1091 | 47 | 7 | 817 | 1899 | 174992275 | 174993358 | 0.000000e+00 | 1657.0 |
3 | TraesCS7A01G213400 | chr7D | 87.674 | 430 | 45 | 5 | 425 | 850 | 174991849 | 174992274 | 7.340000e-136 | 494.0 |
4 | TraesCS7A01G213400 | chr7D | 87.532 | 385 | 33 | 9 | 2571 | 2948 | 174993779 | 174994155 | 5.840000e-117 | 431.0 |
5 | TraesCS7A01G213400 | chr7D | 98.113 | 106 | 2 | 0 | 2506 | 2611 | 174993755 | 174993860 | 5.020000e-43 | 185.0 |
6 | TraesCS7A01G213400 | chr7D | 84.000 | 125 | 6 | 2 | 2099 | 2209 | 174993634 | 174993758 | 1.120000e-19 | 108.0 |
7 | TraesCS7A01G213400 | chr7D | 93.548 | 62 | 3 | 1 | 1967 | 2027 | 174993478 | 174993539 | 1.130000e-14 | 91.6 |
8 | TraesCS7A01G213400 | chr7B | 92.257 | 904 | 48 | 11 | 1010 | 1903 | 140652767 | 140653658 | 0.000000e+00 | 1262.0 |
9 | TraesCS7A01G213400 | chr7B | 91.148 | 418 | 27 | 8 | 558 | 968 | 140652356 | 140652770 | 2.570000e-155 | 558.0 |
10 | TraesCS7A01G213400 | chr7B | 85.615 | 431 | 52 | 9 | 1 | 429 | 140651795 | 140652217 | 7.500000e-121 | 444.0 |
11 | TraesCS7A01G213400 | chr7B | 85.920 | 348 | 37 | 8 | 2571 | 2910 | 140654062 | 140654405 | 7.770000e-96 | 361.0 |
12 | TraesCS7A01G213400 | chr7B | 96.226 | 106 | 4 | 0 | 2506 | 2611 | 140654038 | 140654143 | 1.090000e-39 | 174.0 |
13 | TraesCS7A01G213400 | chr7B | 83.200 | 125 | 7 | 2 | 2099 | 2209 | 140653917 | 140654041 | 5.200000e-18 | 102.0 |
14 | TraesCS7A01G213400 | chr5A | 93.857 | 293 | 16 | 1 | 2209 | 2499 | 353070425 | 353070133 | 9.700000e-120 | 440.0 |
15 | TraesCS7A01G213400 | chr5A | 85.492 | 193 | 26 | 2 | 1119 | 1309 | 594770972 | 594771164 | 1.790000e-47 | 200.0 |
16 | TraesCS7A01G213400 | chr1A | 93.857 | 293 | 16 | 1 | 2209 | 2499 | 204830595 | 204830303 | 9.700000e-120 | 440.0 |
17 | TraesCS7A01G213400 | chr2A | 94.097 | 288 | 17 | 0 | 2207 | 2494 | 118486473 | 118486760 | 3.490000e-119 | 438.0 |
18 | TraesCS7A01G213400 | chr2A | 93.814 | 291 | 18 | 0 | 2204 | 2494 | 597847809 | 597848099 | 3.490000e-119 | 438.0 |
19 | TraesCS7A01G213400 | chr2A | 93.793 | 290 | 18 | 0 | 2205 | 2494 | 771545620 | 771545909 | 1.260000e-118 | 436.0 |
20 | TraesCS7A01G213400 | chr2A | 93.243 | 296 | 18 | 1 | 2206 | 2499 | 698086609 | 698086314 | 4.510000e-118 | 435.0 |
21 | TraesCS7A01G213400 | chr2A | 89.326 | 178 | 19 | 0 | 1138 | 1315 | 35975995 | 35976172 | 1.060000e-54 | 224.0 |
22 | TraesCS7A01G213400 | chr6A | 93.793 | 290 | 18 | 0 | 2205 | 2494 | 410575449 | 410575738 | 1.260000e-118 | 436.0 |
23 | TraesCS7A01G213400 | chr6A | 94.340 | 159 | 9 | 0 | 1157 | 1315 | 520355711 | 520355553 | 8.160000e-61 | 244.0 |
24 | TraesCS7A01G213400 | chr3A | 92.484 | 306 | 22 | 1 | 2205 | 2509 | 583228904 | 583229209 | 1.260000e-118 | 436.0 |
25 | TraesCS7A01G213400 | chr6D | 93.711 | 159 | 10 | 0 | 1157 | 1315 | 378379441 | 378379283 | 3.800000e-59 | 239.0 |
26 | TraesCS7A01G213400 | chr2D | 89.888 | 178 | 18 | 0 | 1138 | 1315 | 32763250 | 32763427 | 2.290000e-56 | 230.0 |
27 | TraesCS7A01G213400 | chr2B | 89.888 | 178 | 18 | 0 | 1138 | 1315 | 54440318 | 54440495 | 2.290000e-56 | 230.0 |
28 | TraesCS7A01G213400 | chr6B | 92.453 | 159 | 12 | 0 | 1157 | 1315 | 564993599 | 564993441 | 8.220000e-56 | 228.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7A01G213400 | chr7A | 177135007 | 177137955 | 2948 | False | 5446.000000 | 5446 | 100.000 | 1 | 2949 | 1 | chr7A.!!$F1 | 2948 |
1 | TraesCS7A01G213400 | chr7D | 174991849 | 174994155 | 2306 | False | 494.433333 | 1657 | 90.864 | 425 | 2948 | 6 | chr7D.!!$F1 | 2523 |
2 | TraesCS7A01G213400 | chr7B | 140651795 | 140654405 | 2610 | False | 483.500000 | 1262 | 89.061 | 1 | 2910 | 6 | chr7B.!!$F1 | 2909 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
369 | 371 | 0.099613 | AAACAACACAACGATGCGCA | 59.9 | 45.0 | 14.96 | 14.96 | 0.0 | 6.09 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2193 | 2395 | 0.463833 | GGCCTTAGTTGCGTATGCCT | 60.464 | 55.0 | 4.05 | 0.0 | 41.78 | 4.75 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 5.568685 | TTCACCAAGTTCGTCATTTTTGA | 57.431 | 34.783 | 0.00 | 0.00 | 0.00 | 2.69 |
25 | 26 | 5.802956 | TCACCAAGTTCGTCATTTTTGAAAC | 59.197 | 36.000 | 0.00 | 0.00 | 0.00 | 2.78 |
26 | 27 | 5.804979 | CACCAAGTTCGTCATTTTTGAAACT | 59.195 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
27 | 28 | 6.020678 | CACCAAGTTCGTCATTTTTGAAACTC | 60.021 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
30 | 31 | 4.887655 | AGTTCGTCATTTTTGAAACTCCCT | 59.112 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
31 | 32 | 5.008712 | AGTTCGTCATTTTTGAAACTCCCTC | 59.991 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
35 | 36 | 5.858581 | CGTCATTTTTGAAACTCCCTCAATC | 59.141 | 40.000 | 0.00 | 0.00 | 32.98 | 2.67 |
36 | 37 | 5.858581 | GTCATTTTTGAAACTCCCTCAATCG | 59.141 | 40.000 | 0.00 | 0.00 | 32.98 | 3.34 |
39 | 40 | 6.648879 | TTTTTGAAACTCCCTCAATCGATT | 57.351 | 33.333 | 4.39 | 4.39 | 32.98 | 3.34 |
40 | 41 | 7.753309 | TTTTTGAAACTCCCTCAATCGATTA | 57.247 | 32.000 | 10.97 | 0.00 | 32.98 | 1.75 |
42 | 43 | 5.023533 | TGAAACTCCCTCAATCGATTAGG | 57.976 | 43.478 | 10.97 | 16.22 | 0.00 | 2.69 |
49 | 50 | 3.627577 | CCCTCAATCGATTAGGGTGTTTG | 59.372 | 47.826 | 27.68 | 11.87 | 44.34 | 2.93 |
50 | 51 | 4.261801 | CCTCAATCGATTAGGGTGTTTGT | 58.738 | 43.478 | 10.97 | 0.00 | 0.00 | 2.83 |
51 | 52 | 4.700213 | CCTCAATCGATTAGGGTGTTTGTT | 59.300 | 41.667 | 10.97 | 0.00 | 0.00 | 2.83 |
53 | 54 | 6.249035 | TCAATCGATTAGGGTGTTTGTTTC | 57.751 | 37.500 | 10.97 | 0.00 | 0.00 | 2.78 |
54 | 55 | 4.939509 | ATCGATTAGGGTGTTTGTTTCG | 57.060 | 40.909 | 0.00 | 0.00 | 0.00 | 3.46 |
55 | 56 | 3.068560 | TCGATTAGGGTGTTTGTTTCGG | 58.931 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
56 | 57 | 2.160813 | CGATTAGGGTGTTTGTTTCGGG | 59.839 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
73 | 74 | 4.981806 | TCGGGATTTGGTTCATGATTTC | 57.018 | 40.909 | 0.00 | 0.00 | 0.00 | 2.17 |
80 | 81 | 3.694043 | TGGTTCATGATTTCGACTGGA | 57.306 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
85 | 86 | 6.093495 | TGGTTCATGATTTCGACTGGATTAAC | 59.907 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
105 | 107 | 7.899178 | TTAACGACTTCTGAAATCAATAGCA | 57.101 | 32.000 | 0.00 | 0.00 | 0.00 | 3.49 |
124 | 126 | 3.509967 | AGCAGCAACCACCCTATAAAAAC | 59.490 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
130 | 132 | 6.722129 | AGCAACCACCCTATAAAAACACATTA | 59.278 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
136 | 138 | 9.418045 | CCACCCTATAAAAACACATTAACAAAG | 57.582 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
148 | 150 | 7.257722 | ACACATTAACAAAGAAGAAACACTGG | 58.742 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
174 | 176 | 7.023575 | GGCATTATAGCAACAATATAGTGCAC | 58.976 | 38.462 | 9.40 | 9.40 | 44.39 | 4.57 |
183 | 185 | 6.542852 | CAACAATATAGTGCACACAACTACC | 58.457 | 40.000 | 21.04 | 0.00 | 0.00 | 3.18 |
187 | 189 | 0.180171 | AGTGCACACAACTACCAGCA | 59.820 | 50.000 | 21.04 | 0.00 | 0.00 | 4.41 |
198 | 200 | 6.204882 | ACACAACTACCAGCATAAGAAACTTC | 59.795 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
199 | 201 | 5.705905 | ACAACTACCAGCATAAGAAACTTCC | 59.294 | 40.000 | 0.00 | 0.00 | 0.00 | 3.46 |
202 | 204 | 5.724854 | ACTACCAGCATAAGAAACTTCCCTA | 59.275 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
208 | 210 | 7.047891 | CAGCATAAGAAACTTCCCTACATACA | 58.952 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
209 | 211 | 7.011482 | CAGCATAAGAAACTTCCCTACATACAC | 59.989 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
214 | 216 | 6.180472 | AGAAACTTCCCTACATACACATTGG | 58.820 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
260 | 262 | 2.368548 | ACATTTTCAGAAAAGGCCCACC | 59.631 | 45.455 | 18.11 | 0.00 | 35.71 | 4.61 |
266 | 268 | 3.850752 | TCAGAAAAGGCCCACCAAAATA | 58.149 | 40.909 | 0.00 | 0.00 | 39.06 | 1.40 |
304 | 306 | 6.542821 | AGAAAACACACTCAATTATCTCCCA | 58.457 | 36.000 | 0.00 | 0.00 | 0.00 | 4.37 |
317 | 319 | 0.539438 | TCTCCCACACATGCCAAACC | 60.539 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
324 | 326 | 3.380142 | CACACATGCCAAACCAAGTAAC | 58.620 | 45.455 | 0.00 | 0.00 | 0.00 | 2.50 |
330 | 332 | 5.757808 | ACATGCCAAACCAAGTAACATTTTC | 59.242 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
331 | 333 | 4.363999 | TGCCAAACCAAGTAACATTTTCG | 58.636 | 39.130 | 0.00 | 0.00 | 0.00 | 3.46 |
332 | 334 | 4.142138 | TGCCAAACCAAGTAACATTTTCGT | 60.142 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
341 | 343 | 7.960738 | ACCAAGTAACATTTTCGTATGAAATCG | 59.039 | 33.333 | 10.85 | 7.76 | 43.32 | 3.34 |
352 | 354 | 6.301687 | TCGTATGAAATCGAAAACACCAAA | 57.698 | 33.333 | 0.00 | 0.00 | 33.13 | 3.28 |
356 | 358 | 6.582437 | ATGAAATCGAAAACACCAAACAAC | 57.418 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
357 | 359 | 5.470368 | TGAAATCGAAAACACCAAACAACA | 58.530 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
361 | 363 | 3.982058 | TCGAAAACACCAAACAACACAAC | 59.018 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
364 | 366 | 3.859411 | AACACCAAACAACACAACGAT | 57.141 | 38.095 | 0.00 | 0.00 | 0.00 | 3.73 |
365 | 367 | 3.143807 | ACACCAAACAACACAACGATG | 57.856 | 42.857 | 0.00 | 0.00 | 0.00 | 3.84 |
367 | 369 | 1.119635 | CCAAACAACACAACGATGCG | 58.880 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
369 | 371 | 0.099613 | AAACAACACAACGATGCGCA | 59.900 | 45.000 | 14.96 | 14.96 | 0.00 | 6.09 |
382 | 384 | 1.847798 | ATGCGCACCCAACCCTTCTA | 61.848 | 55.000 | 14.90 | 0.00 | 0.00 | 2.10 |
390 | 392 | 5.123936 | GCACCCAACCCTTCTAGTAATAAG | 58.876 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
450 | 452 | 3.272581 | TGGATGCTCACATACACACATG | 58.727 | 45.455 | 0.00 | 0.00 | 42.46 | 3.21 |
462 | 464 | 5.926542 | ACATACACACATGTACACTCACTTC | 59.073 | 40.000 | 0.00 | 0.00 | 44.11 | 3.01 |
470 | 472 | 4.137849 | TGTACACTCACTTCTACGAACG | 57.862 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
490 | 492 | 0.528466 | CGCTCGCACACACCATATCT | 60.528 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
506 | 508 | 0.976641 | ATCTTGTGAGCACCTCCGAA | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
507 | 509 | 0.318441 | TCTTGTGAGCACCTCCGAAG | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
516 | 518 | 0.903454 | CACCTCCGAAGTACTGGGGT | 60.903 | 60.000 | 12.07 | 5.53 | 31.46 | 4.95 |
527 | 529 | 1.272212 | GTACTGGGGTGCCACAAAATG | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
530 | 532 | 1.967066 | CTGGGGTGCCACAAAATGTTA | 59.033 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
607 | 651 | 6.404623 | CCACTGAACAAACATTGTGAGAAAGA | 60.405 | 38.462 | 0.00 | 0.00 | 44.59 | 2.52 |
608 | 652 | 7.198390 | CACTGAACAAACATTGTGAGAAAGAT | 58.802 | 34.615 | 0.00 | 0.00 | 44.59 | 2.40 |
653 | 698 | 5.367937 | ACACTATCAATGCCAAGTCTAGGAT | 59.632 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
680 | 725 | 4.730949 | TCCTGGTAGACTAATTTCACCG | 57.269 | 45.455 | 0.00 | 0.00 | 31.64 | 4.94 |
698 | 746 | 1.821216 | CGCAAGGAACCTAACCATGT | 58.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
768 | 822 | 2.160205 | TGGACGTGTGTTCCACAAAAA | 58.840 | 42.857 | 0.00 | 0.00 | 46.28 | 1.94 |
850 | 938 | 2.444895 | CGGGGAGGAAGAGGGAGG | 60.445 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
895 | 985 | 0.534412 | CCGCTTCTGTGATGGAGAGT | 59.466 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1023 | 1116 | 2.437359 | AAGCATCCTGAGGCACGC | 60.437 | 61.111 | 6.56 | 0.00 | 41.13 | 5.34 |
1057 | 1150 | 1.001764 | CATGCAGGAGTTCCAGCCA | 60.002 | 57.895 | 12.30 | 2.47 | 46.58 | 4.75 |
1061 | 1154 | 1.372087 | GCAGGAGTTCCAGCCAATCG | 61.372 | 60.000 | 4.34 | 0.00 | 42.01 | 3.34 |
1114 | 1210 | 4.918201 | GAATCGGCGGGCCTCCTG | 62.918 | 72.222 | 11.46 | 4.54 | 0.00 | 3.86 |
1359 | 1461 | 2.143594 | GACAAGGACGTCTCCAGCGT | 62.144 | 60.000 | 16.46 | 4.52 | 45.86 | 5.07 |
1365 | 1467 | 3.715854 | ACGTCTCCAGCGTCAATAC | 57.284 | 52.632 | 0.00 | 0.00 | 38.23 | 1.89 |
1392 | 1494 | 3.482783 | GAACGCACGCTCTGGCTC | 61.483 | 66.667 | 0.00 | 0.00 | 36.09 | 4.70 |
1424 | 1526 | 3.775654 | CCAGCCTCACCTCCGGTC | 61.776 | 72.222 | 0.00 | 0.00 | 31.02 | 4.79 |
1506 | 1608 | 3.777925 | CGGAAGCACGCCGTTCAG | 61.778 | 66.667 | 0.00 | 0.00 | 43.66 | 3.02 |
1534 | 1636 | 2.703798 | CCCAAGCACCTTCATGGCG | 61.704 | 63.158 | 0.00 | 0.00 | 40.22 | 5.69 |
1631 | 1733 | 1.741770 | CTTCCGGCCTTCACCTTCG | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 3.79 |
1688 | 1790 | 1.068281 | CAGTCACACTCACAGAGCAGT | 59.932 | 52.381 | 0.00 | 0.00 | 32.04 | 4.40 |
1715 | 1817 | 2.338620 | CGACTTCCACCGCAGACA | 59.661 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
1719 | 1821 | 1.003355 | CTTCCACCGCAGACATGGT | 60.003 | 57.895 | 0.00 | 0.00 | 39.66 | 3.55 |
1774 | 1876 | 2.285773 | ATCAGCGTCAGACTGGCCA | 61.286 | 57.895 | 4.71 | 4.71 | 35.78 | 5.36 |
1808 | 1910 | 1.372623 | GACGCCGGGATATTCGACC | 60.373 | 63.158 | 2.18 | 0.00 | 0.00 | 4.79 |
1959 | 2096 | 2.159338 | TGTCTAATCGTAACCACCGCTC | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2006 | 2162 | 1.453235 | AGCTTGGCTGCTTCTGTGA | 59.547 | 52.632 | 0.00 | 0.00 | 40.93 | 3.58 |
2014 | 2170 | 2.159599 | GGCTGCTTCTGTGATTCTTTCG | 60.160 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2027 | 2183 | 2.286365 | TCTTTCGATGGGGCAGTTTT | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2028 | 2184 | 2.593026 | TCTTTCGATGGGGCAGTTTTT | 58.407 | 42.857 | 0.00 | 0.00 | 0.00 | 1.94 |
2029 | 2185 | 2.295909 | TCTTTCGATGGGGCAGTTTTTG | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
2054 | 2210 | 5.234757 | CACACTTGTGCAAAGCAAATTATGT | 59.765 | 36.000 | 0.10 | 0.00 | 41.47 | 2.29 |
2064 | 2220 | 6.183359 | GCAAAGCAAATTATGTCTGAACTTCG | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 3.79 |
2065 | 2221 | 5.551760 | AGCAAATTATGTCTGAACTTCGG | 57.448 | 39.130 | 0.00 | 0.00 | 0.00 | 4.30 |
2071 | 2227 | 9.840427 | CAAATTATGTCTGAACTTCGGTTTAAT | 57.160 | 29.630 | 0.00 | 0.00 | 38.41 | 1.40 |
2196 | 2398 | 8.090831 | TCTATATATCTTTGTCATGACACAGGC | 58.909 | 37.037 | 31.64 | 6.94 | 41.67 | 4.85 |
2197 | 2399 | 2.636647 | TCTTTGTCATGACACAGGCA | 57.363 | 45.000 | 31.64 | 17.38 | 41.67 | 4.75 |
2198 | 2400 | 3.144657 | TCTTTGTCATGACACAGGCAT | 57.855 | 42.857 | 31.64 | 0.00 | 41.67 | 4.40 |
2199 | 2401 | 4.284829 | TCTTTGTCATGACACAGGCATA | 57.715 | 40.909 | 31.64 | 16.48 | 41.67 | 3.14 |
2200 | 2402 | 4.002982 | TCTTTGTCATGACACAGGCATAC | 58.997 | 43.478 | 31.64 | 4.77 | 41.67 | 2.39 |
2202 | 2404 | 0.652592 | GTCATGACACAGGCATACGC | 59.347 | 55.000 | 21.07 | 0.00 | 37.44 | 4.42 |
2203 | 2405 | 0.248843 | TCATGACACAGGCATACGCA | 59.751 | 50.000 | 0.00 | 0.00 | 41.24 | 5.24 |
2204 | 2406 | 1.085893 | CATGACACAGGCATACGCAA | 58.914 | 50.000 | 0.00 | 0.00 | 41.24 | 4.85 |
2206 | 2408 | 0.034756 | TGACACAGGCATACGCAACT | 59.965 | 50.000 | 0.00 | 0.00 | 41.24 | 3.16 |
2208 | 2410 | 2.289133 | TGACACAGGCATACGCAACTAA | 60.289 | 45.455 | 0.00 | 0.00 | 41.24 | 2.24 |
2209 | 2411 | 2.346803 | ACACAGGCATACGCAACTAAG | 58.653 | 47.619 | 0.00 | 0.00 | 41.24 | 2.18 |
2210 | 2412 | 1.665679 | CACAGGCATACGCAACTAAGG | 59.334 | 52.381 | 0.00 | 0.00 | 41.24 | 2.69 |
2211 | 2413 | 0.657840 | CAGGCATACGCAACTAAGGC | 59.342 | 55.000 | 0.00 | 0.00 | 41.24 | 4.35 |
2212 | 2414 | 0.463833 | AGGCATACGCAACTAAGGCC | 60.464 | 55.000 | 0.00 | 0.00 | 41.24 | 5.19 |
2213 | 2415 | 0.463833 | GGCATACGCAACTAAGGCCT | 60.464 | 55.000 | 0.00 | 0.00 | 41.24 | 5.19 |
2214 | 2416 | 0.938008 | GCATACGCAACTAAGGCCTC | 59.062 | 55.000 | 5.23 | 0.00 | 38.36 | 4.70 |
2215 | 2417 | 1.473434 | GCATACGCAACTAAGGCCTCT | 60.473 | 52.381 | 5.23 | 0.00 | 38.36 | 3.69 |
2216 | 2418 | 2.906354 | CATACGCAACTAAGGCCTCTT | 58.094 | 47.619 | 5.23 | 0.00 | 37.03 | 2.85 |
2217 | 2419 | 3.270877 | CATACGCAACTAAGGCCTCTTT | 58.729 | 45.455 | 5.23 | 0.00 | 34.59 | 2.52 |
2218 | 2420 | 2.271944 | ACGCAACTAAGGCCTCTTTT | 57.728 | 45.000 | 5.23 | 0.00 | 34.59 | 2.27 |
2219 | 2421 | 1.880027 | ACGCAACTAAGGCCTCTTTTG | 59.120 | 47.619 | 5.23 | 10.78 | 34.59 | 2.44 |
2220 | 2422 | 1.200020 | CGCAACTAAGGCCTCTTTTGG | 59.800 | 52.381 | 5.23 | 0.00 | 34.59 | 3.28 |
2221 | 2423 | 2.239400 | GCAACTAAGGCCTCTTTTGGT | 58.761 | 47.619 | 5.23 | 0.00 | 34.59 | 3.67 |
2222 | 2424 | 2.628178 | GCAACTAAGGCCTCTTTTGGTT | 59.372 | 45.455 | 5.23 | 1.01 | 34.59 | 3.67 |
2223 | 2425 | 3.305403 | GCAACTAAGGCCTCTTTTGGTTC | 60.305 | 47.826 | 5.23 | 0.00 | 34.59 | 3.62 |
2224 | 2426 | 3.876309 | ACTAAGGCCTCTTTTGGTTCA | 57.124 | 42.857 | 5.23 | 0.00 | 34.59 | 3.18 |
2225 | 2427 | 4.388577 | ACTAAGGCCTCTTTTGGTTCAT | 57.611 | 40.909 | 5.23 | 0.00 | 34.59 | 2.57 |
2226 | 2428 | 5.514500 | ACTAAGGCCTCTTTTGGTTCATA | 57.486 | 39.130 | 5.23 | 0.00 | 34.59 | 2.15 |
2227 | 2429 | 5.501156 | ACTAAGGCCTCTTTTGGTTCATAG | 58.499 | 41.667 | 5.23 | 1.44 | 34.59 | 2.23 |
2228 | 2430 | 3.372440 | AGGCCTCTTTTGGTTCATAGG | 57.628 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
2229 | 2431 | 2.919602 | AGGCCTCTTTTGGTTCATAGGA | 59.080 | 45.455 | 0.00 | 0.00 | 0.00 | 2.94 |
2230 | 2432 | 3.529319 | AGGCCTCTTTTGGTTCATAGGAT | 59.471 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
2231 | 2433 | 4.726825 | AGGCCTCTTTTGGTTCATAGGATA | 59.273 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
2232 | 2434 | 5.066593 | GGCCTCTTTTGGTTCATAGGATAG | 58.933 | 45.833 | 0.00 | 0.00 | 0.00 | 2.08 |
2233 | 2435 | 5.163195 | GGCCTCTTTTGGTTCATAGGATAGA | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2234 | 2436 | 6.357367 | GCCTCTTTTGGTTCATAGGATAGAA | 58.643 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2235 | 2437 | 7.001073 | GCCTCTTTTGGTTCATAGGATAGAAT | 58.999 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
2236 | 2438 | 7.503902 | GCCTCTTTTGGTTCATAGGATAGAATT | 59.496 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
2268 | 2470 | 9.844257 | AGAAATAGGAATCTTGTAGGAAATGAG | 57.156 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2269 | 2471 | 9.838339 | GAAATAGGAATCTTGTAGGAAATGAGA | 57.162 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2271 | 2473 | 9.790344 | AATAGGAATCTTGTAGGAAATGAGATG | 57.210 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2272 | 2474 | 7.443302 | AGGAATCTTGTAGGAAATGAGATGA | 57.557 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2273 | 2475 | 7.278875 | AGGAATCTTGTAGGAAATGAGATGAC | 58.721 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
2274 | 2476 | 7.050377 | GGAATCTTGTAGGAAATGAGATGACA | 58.950 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
2275 | 2477 | 7.718753 | GGAATCTTGTAGGAAATGAGATGACAT | 59.281 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
2276 | 2478 | 8.447924 | AATCTTGTAGGAAATGAGATGACATG | 57.552 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
2277 | 2479 | 6.950842 | TCTTGTAGGAAATGAGATGACATGT | 58.049 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2278 | 2480 | 8.078060 | TCTTGTAGGAAATGAGATGACATGTA | 57.922 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
2279 | 2481 | 8.708378 | TCTTGTAGGAAATGAGATGACATGTAT | 58.292 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
2280 | 2482 | 8.893219 | TTGTAGGAAATGAGATGACATGTATC | 57.107 | 34.615 | 0.00 | 2.87 | 0.00 | 2.24 |
2281 | 2483 | 8.255111 | TGTAGGAAATGAGATGACATGTATCT | 57.745 | 34.615 | 14.05 | 14.05 | 37.59 | 1.98 |
2282 | 2484 | 8.363390 | TGTAGGAAATGAGATGACATGTATCTC | 58.637 | 37.037 | 24.04 | 24.04 | 46.82 | 2.75 |
2295 | 2497 | 5.710646 | ACATGTATCTCAGGTCCTATGAGT | 58.289 | 41.667 | 0.00 | 0.35 | 43.79 | 3.41 |
2296 | 2498 | 6.853490 | ACATGTATCTCAGGTCCTATGAGTA | 58.147 | 40.000 | 0.00 | 0.00 | 43.79 | 2.59 |
2297 | 2499 | 6.945435 | ACATGTATCTCAGGTCCTATGAGTAG | 59.055 | 42.308 | 0.00 | 0.00 | 43.79 | 2.57 |
2314 | 2516 | 9.703892 | CTATGAGTAGGAATAGGAAACAAGATG | 57.296 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2315 | 2517 | 7.496346 | TGAGTAGGAATAGGAAACAAGATGT | 57.504 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2316 | 2518 | 7.556844 | TGAGTAGGAATAGGAAACAAGATGTC | 58.443 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
2317 | 2519 | 7.180229 | TGAGTAGGAATAGGAAACAAGATGTCA | 59.820 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
2318 | 2520 | 8.095452 | AGTAGGAATAGGAAACAAGATGTCAT | 57.905 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
2319 | 2521 | 8.552296 | AGTAGGAATAGGAAACAAGATGTCATT | 58.448 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2320 | 2522 | 9.178758 | GTAGGAATAGGAAACAAGATGTCATTT | 57.821 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2321 | 2523 | 8.059798 | AGGAATAGGAAACAAGATGTCATTTG | 57.940 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
2322 | 2524 | 7.123247 | AGGAATAGGAAACAAGATGTCATTTGG | 59.877 | 37.037 | 10.50 | 0.00 | 0.00 | 3.28 |
2323 | 2525 | 7.093771 | GGAATAGGAAACAAGATGTCATTTGGT | 60.094 | 37.037 | 10.50 | 3.75 | 0.00 | 3.67 |
2324 | 2526 | 7.781324 | ATAGGAAACAAGATGTCATTTGGTT | 57.219 | 32.000 | 9.41 | 9.41 | 36.95 | 3.67 |
2325 | 2527 | 5.846203 | AGGAAACAAGATGTCATTTGGTTG | 58.154 | 37.500 | 12.70 | 6.32 | 34.55 | 3.77 |
2326 | 2528 | 5.598005 | AGGAAACAAGATGTCATTTGGTTGA | 59.402 | 36.000 | 12.70 | 0.00 | 34.55 | 3.18 |
2327 | 2529 | 5.691754 | GGAAACAAGATGTCATTTGGTTGAC | 59.308 | 40.000 | 12.70 | 0.00 | 45.05 | 3.18 |
2338 | 2540 | 7.951530 | GTCATTTGGTTGACATCAAAAGAAT | 57.048 | 32.000 | 9.65 | 0.00 | 44.38 | 2.40 |
2339 | 2541 | 8.369218 | GTCATTTGGTTGACATCAAAAGAATT | 57.631 | 30.769 | 9.65 | 0.00 | 44.38 | 2.17 |
2340 | 2542 | 8.829612 | GTCATTTGGTTGACATCAAAAGAATTT | 58.170 | 29.630 | 9.65 | 0.00 | 44.38 | 1.82 |
2363 | 2565 | 7.823745 | TTTTTCATTGAGTCTAGGCTCTTTT | 57.176 | 32.000 | 24.20 | 7.12 | 36.51 | 2.27 |
2364 | 2566 | 7.823745 | TTTTCATTGAGTCTAGGCTCTTTTT | 57.176 | 32.000 | 24.20 | 4.72 | 36.51 | 1.94 |
2393 | 2595 | 9.973661 | TTTTTCTATGAAATGTGGAGGATAGAA | 57.026 | 29.630 | 0.00 | 0.00 | 32.95 | 2.10 |
2394 | 2596 | 9.973661 | TTTTCTATGAAATGTGGAGGATAGAAA | 57.026 | 29.630 | 0.00 | 0.00 | 39.16 | 2.52 |
2395 | 2597 | 8.964476 | TTCTATGAAATGTGGAGGATAGAAAC | 57.036 | 34.615 | 0.00 | 0.00 | 32.24 | 2.78 |
2396 | 2598 | 7.509546 | TCTATGAAATGTGGAGGATAGAAACC | 58.490 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
2397 | 2599 | 5.512942 | TGAAATGTGGAGGATAGAAACCA | 57.487 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
2398 | 2600 | 5.886609 | TGAAATGTGGAGGATAGAAACCAA | 58.113 | 37.500 | 0.00 | 0.00 | 34.11 | 3.67 |
2399 | 2601 | 6.493166 | TGAAATGTGGAGGATAGAAACCAAT | 58.507 | 36.000 | 0.00 | 0.00 | 34.11 | 3.16 |
2400 | 2602 | 6.603201 | TGAAATGTGGAGGATAGAAACCAATC | 59.397 | 38.462 | 0.00 | 0.00 | 34.11 | 2.67 |
2401 | 2603 | 4.503714 | TGTGGAGGATAGAAACCAATCC | 57.496 | 45.455 | 0.00 | 0.00 | 41.77 | 3.01 |
2438 | 2640 | 8.474710 | AAGAATCCATTCCTATGAATCAAAGG | 57.525 | 34.615 | 0.00 | 0.00 | 39.20 | 3.11 |
2439 | 2641 | 7.008941 | AGAATCCATTCCTATGAATCAAAGGG | 58.991 | 38.462 | 0.00 | 0.00 | 39.20 | 3.95 |
2440 | 2642 | 4.473444 | TCCATTCCTATGAATCAAAGGGC | 58.527 | 43.478 | 0.00 | 0.00 | 39.20 | 5.19 |
2441 | 2643 | 4.168675 | TCCATTCCTATGAATCAAAGGGCT | 59.831 | 41.667 | 0.00 | 0.00 | 39.20 | 5.19 |
2442 | 2644 | 4.897670 | CCATTCCTATGAATCAAAGGGCTT | 59.102 | 41.667 | 0.00 | 0.00 | 39.20 | 4.35 |
2443 | 2645 | 5.364735 | CCATTCCTATGAATCAAAGGGCTTT | 59.635 | 40.000 | 0.00 | 0.00 | 39.20 | 3.51 |
2444 | 2646 | 6.550854 | CCATTCCTATGAATCAAAGGGCTTTA | 59.449 | 38.462 | 0.00 | 0.00 | 39.20 | 1.85 |
2445 | 2647 | 7.069826 | CCATTCCTATGAATCAAAGGGCTTTAA | 59.930 | 37.037 | 0.00 | 0.00 | 39.20 | 1.52 |
2446 | 2648 | 8.477256 | CATTCCTATGAATCAAAGGGCTTTAAA | 58.523 | 33.333 | 0.00 | 0.00 | 39.20 | 1.52 |
2447 | 2649 | 7.645058 | TCCTATGAATCAAAGGGCTTTAAAG | 57.355 | 36.000 | 11.02 | 11.02 | 0.00 | 1.85 |
2448 | 2650 | 6.607198 | TCCTATGAATCAAAGGGCTTTAAAGG | 59.393 | 38.462 | 16.78 | 0.00 | 0.00 | 3.11 |
2449 | 2651 | 6.607198 | CCTATGAATCAAAGGGCTTTAAAGGA | 59.393 | 38.462 | 16.78 | 4.87 | 0.00 | 3.36 |
2450 | 2652 | 6.933514 | ATGAATCAAAGGGCTTTAAAGGAA | 57.066 | 33.333 | 16.78 | 0.00 | 0.00 | 3.36 |
2451 | 2653 | 6.739331 | TGAATCAAAGGGCTTTAAAGGAAA | 57.261 | 33.333 | 16.78 | 0.00 | 0.00 | 3.13 |
2452 | 2654 | 7.130681 | TGAATCAAAGGGCTTTAAAGGAAAA | 57.869 | 32.000 | 16.78 | 0.00 | 0.00 | 2.29 |
2453 | 2655 | 7.569240 | TGAATCAAAGGGCTTTAAAGGAAAAA | 58.431 | 30.769 | 16.78 | 0.00 | 0.00 | 1.94 |
2560 | 2762 | 0.318120 | GGTTGTTGGTTCAGCATGGG | 59.682 | 55.000 | 0.00 | 0.00 | 36.16 | 4.00 |
2578 | 2780 | 2.029623 | GGGCTATGACAACTCGGAGTA | 58.970 | 52.381 | 11.71 | 0.00 | 0.00 | 2.59 |
2591 | 2793 | 0.974383 | CGGAGTAGGAGGTTGTTGGT | 59.026 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2592 | 2794 | 1.346722 | CGGAGTAGGAGGTTGTTGGTT | 59.653 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
2593 | 2795 | 2.612221 | CGGAGTAGGAGGTTGTTGGTTC | 60.612 | 54.545 | 0.00 | 0.00 | 0.00 | 3.62 |
2594 | 2796 | 2.370849 | GGAGTAGGAGGTTGTTGGTTCA | 59.629 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2595 | 2797 | 3.557264 | GGAGTAGGAGGTTGTTGGTTCAG | 60.557 | 52.174 | 0.00 | 0.00 | 0.00 | 3.02 |
2596 | 2798 | 2.152016 | GTAGGAGGTTGTTGGTTCAGC | 58.848 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
2597 | 2799 | 0.846693 | AGGAGGTTGTTGGTTCAGCT | 59.153 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2598 | 2800 | 1.215423 | AGGAGGTTGTTGGTTCAGCTT | 59.785 | 47.619 | 0.00 | 0.00 | 0.00 | 3.74 |
2599 | 2801 | 1.338020 | GGAGGTTGTTGGTTCAGCTTG | 59.662 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
2600 | 2802 | 1.338020 | GAGGTTGTTGGTTCAGCTTGG | 59.662 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
2601 | 2803 | 0.249447 | GGTTGTTGGTTCAGCTTGGC | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2602 | 2804 | 0.249447 | GTTGTTGGTTCAGCTTGGCC | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
2603 | 2805 | 0.396974 | TTGTTGGTTCAGCTTGGCCT | 60.397 | 50.000 | 3.32 | 0.00 | 0.00 | 5.19 |
2604 | 2806 | 0.476338 | TGTTGGTTCAGCTTGGCCTA | 59.524 | 50.000 | 3.32 | 0.00 | 0.00 | 3.93 |
2605 | 2807 | 1.075374 | TGTTGGTTCAGCTTGGCCTAT | 59.925 | 47.619 | 3.32 | 0.00 | 0.00 | 2.57 |
2606 | 2808 | 1.474077 | GTTGGTTCAGCTTGGCCTATG | 59.526 | 52.381 | 3.32 | 0.00 | 0.00 | 2.23 |
2607 | 2809 | 0.991146 | TGGTTCAGCTTGGCCTATGA | 59.009 | 50.000 | 3.32 | 0.00 | 0.00 | 2.15 |
2608 | 2810 | 1.340017 | TGGTTCAGCTTGGCCTATGAC | 60.340 | 52.381 | 3.32 | 0.00 | 0.00 | 3.06 |
2609 | 2811 | 1.340017 | GGTTCAGCTTGGCCTATGACA | 60.340 | 52.381 | 3.32 | 0.00 | 0.00 | 3.58 |
2610 | 2812 | 2.436417 | GTTCAGCTTGGCCTATGACAA | 58.564 | 47.619 | 3.32 | 0.00 | 0.00 | 3.18 |
2611 | 2813 | 2.113860 | TCAGCTTGGCCTATGACAAC | 57.886 | 50.000 | 3.32 | 0.00 | 0.00 | 3.32 |
2612 | 2814 | 1.630369 | TCAGCTTGGCCTATGACAACT | 59.370 | 47.619 | 3.32 | 0.00 | 0.00 | 3.16 |
2613 | 2815 | 2.012673 | CAGCTTGGCCTATGACAACTC | 58.987 | 52.381 | 3.32 | 0.00 | 0.00 | 3.01 |
2614 | 2816 | 1.009829 | GCTTGGCCTATGACAACTCG | 58.990 | 55.000 | 3.32 | 0.00 | 0.00 | 4.18 |
2615 | 2817 | 1.656652 | CTTGGCCTATGACAACTCGG | 58.343 | 55.000 | 3.32 | 0.00 | 0.00 | 4.63 |
2616 | 2818 | 1.207089 | CTTGGCCTATGACAACTCGGA | 59.793 | 52.381 | 3.32 | 0.00 | 0.00 | 4.55 |
2617 | 2819 | 0.824109 | TGGCCTATGACAACTCGGAG | 59.176 | 55.000 | 3.32 | 2.83 | 0.00 | 4.63 |
2618 | 2820 | 0.824759 | GGCCTATGACAACTCGGAGT | 59.175 | 55.000 | 4.45 | 4.45 | 0.00 | 3.85 |
2619 | 2821 | 2.029623 | GGCCTATGACAACTCGGAGTA | 58.970 | 52.381 | 11.71 | 0.00 | 0.00 | 2.59 |
2620 | 2822 | 2.034812 | GGCCTATGACAACTCGGAGTAG | 59.965 | 54.545 | 11.71 | 3.78 | 0.00 | 2.57 |
2621 | 2823 | 2.034812 | GCCTATGACAACTCGGAGTAGG | 59.965 | 54.545 | 11.71 | 13.76 | 0.00 | 3.18 |
2622 | 2824 | 3.552875 | CCTATGACAACTCGGAGTAGGA | 58.447 | 50.000 | 11.71 | 0.00 | 31.12 | 2.94 |
2623 | 2825 | 3.566322 | CCTATGACAACTCGGAGTAGGAG | 59.434 | 52.174 | 11.71 | 4.84 | 37.54 | 3.69 |
2624 | 2826 | 1.835494 | TGACAACTCGGAGTAGGAGG | 58.165 | 55.000 | 11.71 | 2.06 | 35.82 | 4.30 |
2625 | 2827 | 1.075050 | TGACAACTCGGAGTAGGAGGT | 59.925 | 52.381 | 11.71 | 5.20 | 35.82 | 3.85 |
2627 | 2829 | 0.818296 | CAACTCGGAGTAGGAGGTGG | 59.182 | 60.000 | 11.71 | 0.00 | 43.82 | 4.61 |
2628 | 2830 | 0.408700 | AACTCGGAGTAGGAGGTGGT | 59.591 | 55.000 | 11.71 | 0.00 | 35.82 | 4.16 |
2629 | 2831 | 0.408700 | ACTCGGAGTAGGAGGTGGTT | 59.591 | 55.000 | 9.33 | 0.00 | 35.82 | 3.67 |
2630 | 2832 | 0.818296 | CTCGGAGTAGGAGGTGGTTG | 59.182 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2631 | 2833 | 1.218316 | CGGAGTAGGAGGTGGTTGC | 59.782 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
2651 | 2853 | 2.286872 | CTTCAGCTTGGCCTATGACAG | 58.713 | 52.381 | 3.32 | 0.69 | 0.00 | 3.51 |
2717 | 2919 | 3.482786 | CTTTAGCACGACACATTTCTGC | 58.517 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
2720 | 2922 | 1.151668 | GCACGACACATTTCTGCTCT | 58.848 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2736 | 2938 | 1.003959 | TCTGCGGTGCTGTGCATTA | 60.004 | 52.632 | 0.00 | 0.00 | 41.91 | 1.90 |
2748 | 2950 | 6.424812 | GGTGCTGTGCATTATTTCTTTCTTTT | 59.575 | 34.615 | 0.00 | 0.00 | 41.91 | 2.27 |
2750 | 2952 | 8.977505 | GTGCTGTGCATTATTTCTTTCTTTTTA | 58.022 | 29.630 | 0.00 | 0.00 | 41.91 | 1.52 |
2751 | 2953 | 9.539825 | TGCTGTGCATTATTTCTTTCTTTTTAA | 57.460 | 25.926 | 0.00 | 0.00 | 31.71 | 1.52 |
2766 | 2968 | 5.636837 | TCTTTTTAATTTGAATCGGAGCCG | 58.363 | 37.500 | 1.74 | 1.74 | 41.35 | 5.52 |
2784 | 2986 | 5.006844 | GGAGCCGTTAATTAAGAAGAAGAGC | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2787 | 2989 | 5.163884 | GCCGTTAATTAAGAAGAAGAGCGTT | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 4.84 |
2829 | 3039 | 9.710900 | AAAATTAGACAAAAACCATCTCAATCC | 57.289 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
2830 | 3040 | 8.421249 | AATTAGACAAAAACCATCTCAATCCA | 57.579 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
2833 | 3043 | 6.542821 | AGACAAAAACCATCTCAATCCACTA | 58.457 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2841 | 3051 | 7.862274 | ACCATCTCAATCCACTAATCAGATA | 57.138 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2842 | 3052 | 7.675062 | ACCATCTCAATCCACTAATCAGATAC | 58.325 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
2850 | 3060 | 6.544928 | TCCACTAATCAGATACACACACAT | 57.455 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
2859 | 3069 | 9.665719 | AATCAGATACACACACATAATACAACA | 57.334 | 29.630 | 0.00 | 0.00 | 0.00 | 3.33 |
2886 | 3096 | 4.163458 | ACCACAGTGAAGAAAACCTAGTCA | 59.837 | 41.667 | 0.62 | 0.00 | 0.00 | 3.41 |
2910 | 3120 | 9.906660 | TCAAGGTTTTACATTAACATCATTGAC | 57.093 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
2913 | 3123 | 8.450964 | AGGTTTTACATTAACATCATTGACTCG | 58.549 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
2915 | 3125 | 9.051027 | GTTTTACATTAACATCATTGACTCGTG | 57.949 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
2916 | 3126 | 5.801350 | ACATTAACATCATTGACTCGTGG | 57.199 | 39.130 | 0.00 | 0.00 | 0.00 | 4.94 |
2928 | 3138 | 3.305398 | GACTCGTGGTCATCACTTCTT | 57.695 | 47.619 | 6.46 | 0.00 | 43.94 | 2.52 |
2929 | 3139 | 3.246619 | GACTCGTGGTCATCACTTCTTC | 58.753 | 50.000 | 6.46 | 0.00 | 43.94 | 2.87 |
2931 | 3141 | 1.275291 | TCGTGGTCATCACTTCTTCCC | 59.725 | 52.381 | 0.00 | 0.00 | 43.94 | 3.97 |
2932 | 3142 | 1.276421 | CGTGGTCATCACTTCTTCCCT | 59.724 | 52.381 | 0.00 | 0.00 | 43.94 | 4.20 |
2934 | 3144 | 3.429547 | CGTGGTCATCACTTCTTCCCTAG | 60.430 | 52.174 | 0.00 | 0.00 | 43.94 | 3.02 |
2948 | 3158 | 2.457598 | TCCCTAGCAAGTGACTTCGAT | 58.542 | 47.619 | 0.00 | 0.00 | 0.00 | 3.59 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
5 | 6 | 5.458779 | GGGAGTTTCAAAAATGACGAACTTG | 59.541 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
12 | 13 | 5.858581 | CGATTGAGGGAGTTTCAAAAATGAC | 59.141 | 40.000 | 0.00 | 0.00 | 38.01 | 3.06 |
17 | 18 | 6.374333 | CCTAATCGATTGAGGGAGTTTCAAAA | 59.626 | 38.462 | 20.87 | 0.00 | 38.01 | 2.44 |
30 | 31 | 5.106869 | CGAAACAAACACCCTAATCGATTGA | 60.107 | 40.000 | 20.87 | 4.27 | 0.00 | 2.57 |
31 | 32 | 5.086058 | CGAAACAAACACCCTAATCGATTG | 58.914 | 41.667 | 20.87 | 6.70 | 0.00 | 2.67 |
35 | 36 | 2.160813 | CCCGAAACAAACACCCTAATCG | 59.839 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
36 | 37 | 3.414269 | TCCCGAAACAAACACCCTAATC | 58.586 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
39 | 40 | 3.512219 | AATCCCGAAACAAACACCCTA | 57.488 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
40 | 41 | 2.364002 | CAAATCCCGAAACAAACACCCT | 59.636 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
42 | 43 | 2.101750 | ACCAAATCCCGAAACAAACACC | 59.898 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
43 | 44 | 3.446310 | ACCAAATCCCGAAACAAACAC | 57.554 | 42.857 | 0.00 | 0.00 | 0.00 | 3.32 |
44 | 45 | 3.447586 | TGAACCAAATCCCGAAACAAACA | 59.552 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
46 | 47 | 4.342378 | TCATGAACCAAATCCCGAAACAAA | 59.658 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
49 | 50 | 4.718940 | ATCATGAACCAAATCCCGAAAC | 57.281 | 40.909 | 0.00 | 0.00 | 0.00 | 2.78 |
50 | 51 | 5.621104 | CGAAATCATGAACCAAATCCCGAAA | 60.621 | 40.000 | 0.00 | 0.00 | 0.00 | 3.46 |
51 | 52 | 4.142491 | CGAAATCATGAACCAAATCCCGAA | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
53 | 54 | 3.376859 | TCGAAATCATGAACCAAATCCCG | 59.623 | 43.478 | 0.00 | 0.00 | 0.00 | 5.14 |
54 | 55 | 4.399303 | AGTCGAAATCATGAACCAAATCCC | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
55 | 56 | 5.335127 | CAGTCGAAATCATGAACCAAATCC | 58.665 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
56 | 57 | 5.123820 | TCCAGTCGAAATCATGAACCAAATC | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
73 | 74 | 4.092771 | TCAGAAGTCGTTAATCCAGTCG | 57.907 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
80 | 81 | 8.492673 | TGCTATTGATTTCAGAAGTCGTTAAT | 57.507 | 30.769 | 1.53 | 0.00 | 0.00 | 1.40 |
85 | 86 | 4.330894 | TGCTGCTATTGATTTCAGAAGTCG | 59.669 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
105 | 107 | 4.475345 | TGTGTTTTTATAGGGTGGTTGCT | 58.525 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
124 | 126 | 6.697019 | CCCAGTGTTTCTTCTTTGTTAATGTG | 59.303 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
130 | 132 | 2.430694 | GCCCCAGTGTTTCTTCTTTGTT | 59.569 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
136 | 138 | 4.036852 | GCTATAATGCCCCAGTGTTTCTTC | 59.963 | 45.833 | 0.00 | 0.00 | 0.00 | 2.87 |
138 | 140 | 3.053693 | TGCTATAATGCCCCAGTGTTTCT | 60.054 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
139 | 141 | 3.287222 | TGCTATAATGCCCCAGTGTTTC | 58.713 | 45.455 | 0.00 | 0.00 | 0.00 | 2.78 |
148 | 150 | 6.150976 | TGCACTATATTGTTGCTATAATGCCC | 59.849 | 38.462 | 0.63 | 0.00 | 34.83 | 5.36 |
174 | 176 | 6.348540 | GGAAGTTTCTTATGCTGGTAGTTGTG | 60.349 | 42.308 | 0.00 | 0.00 | 0.00 | 3.33 |
183 | 185 | 7.011482 | GTGTATGTAGGGAAGTTTCTTATGCTG | 59.989 | 40.741 | 0.00 | 0.00 | 0.00 | 4.41 |
187 | 189 | 9.396022 | CAATGTGTATGTAGGGAAGTTTCTTAT | 57.604 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
198 | 200 | 7.054124 | ACTAATCAACCAATGTGTATGTAGGG | 58.946 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
199 | 201 | 9.261180 | CTACTAATCAACCAATGTGTATGTAGG | 57.739 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
208 | 210 | 9.905713 | ATGTGTTATCTACTAATCAACCAATGT | 57.094 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
238 | 240 | 3.576550 | GGTGGGCCTTTTCTGAAAATGTA | 59.423 | 43.478 | 15.30 | 2.93 | 0.00 | 2.29 |
240 | 242 | 2.368221 | TGGTGGGCCTTTTCTGAAAATG | 59.632 | 45.455 | 15.30 | 13.56 | 35.27 | 2.32 |
243 | 245 | 2.166907 | TTGGTGGGCCTTTTCTGAAA | 57.833 | 45.000 | 4.53 | 0.00 | 35.27 | 2.69 |
244 | 246 | 2.166907 | TTTGGTGGGCCTTTTCTGAA | 57.833 | 45.000 | 4.53 | 0.00 | 35.27 | 3.02 |
248 | 250 | 3.323691 | ACAGTATTTTGGTGGGCCTTTTC | 59.676 | 43.478 | 4.53 | 0.00 | 35.27 | 2.29 |
304 | 306 | 3.027412 | TGTTACTTGGTTTGGCATGTGT | 58.973 | 40.909 | 0.00 | 0.00 | 0.00 | 3.72 |
317 | 319 | 9.536558 | TTCGATTTCATACGAAAATGTTACTTG | 57.463 | 29.630 | 0.00 | 0.00 | 44.12 | 3.16 |
330 | 332 | 5.910166 | TGTTTGGTGTTTTCGATTTCATACG | 59.090 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
331 | 333 | 7.221067 | TGTTGTTTGGTGTTTTCGATTTCATAC | 59.779 | 33.333 | 0.00 | 0.00 | 0.00 | 2.39 |
332 | 334 | 7.221067 | GTGTTGTTTGGTGTTTTCGATTTCATA | 59.779 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
341 | 343 | 3.982058 | TCGTTGTGTTGTTTGGTGTTTTC | 59.018 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
352 | 354 | 1.010125 | GTGCGCATCGTTGTGTTGT | 60.010 | 52.632 | 15.91 | 0.00 | 35.72 | 3.32 |
356 | 358 | 2.902419 | TTGGGTGCGCATCGTTGTG | 61.902 | 57.895 | 15.91 | 2.63 | 36.41 | 3.33 |
357 | 359 | 2.593148 | TTGGGTGCGCATCGTTGT | 60.593 | 55.556 | 15.91 | 0.00 | 0.00 | 3.32 |
364 | 366 | 2.463589 | CTAGAAGGGTTGGGTGCGCA | 62.464 | 60.000 | 5.66 | 5.66 | 0.00 | 6.09 |
365 | 367 | 1.745489 | CTAGAAGGGTTGGGTGCGC | 60.745 | 63.158 | 0.00 | 0.00 | 0.00 | 6.09 |
367 | 369 | 3.646736 | ATTACTAGAAGGGTTGGGTGC | 57.353 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
369 | 371 | 6.964086 | TCTTCTTATTACTAGAAGGGTTGGGT | 59.036 | 38.462 | 11.46 | 0.00 | 45.52 | 4.51 |
411 | 413 | 5.925397 | GCATCCACAATTGTATTGTGTTCAA | 59.075 | 36.000 | 23.43 | 11.59 | 46.05 | 2.69 |
420 | 422 | 8.282115 | TGTGTATGTGAGCATCCACAATTGTAT | 61.282 | 37.037 | 11.53 | 0.00 | 44.99 | 2.29 |
447 | 449 | 4.553815 | CGTTCGTAGAAGTGAGTGTACATG | 59.446 | 45.833 | 0.00 | 0.00 | 45.90 | 3.21 |
450 | 452 | 2.907392 | GCGTTCGTAGAAGTGAGTGTAC | 59.093 | 50.000 | 0.00 | 0.00 | 45.90 | 2.90 |
462 | 464 | 3.887327 | GTGCGAGCGCGTTCGTAG | 61.887 | 66.667 | 38.30 | 17.87 | 45.51 | 3.51 |
470 | 472 | 2.094126 | GATATGGTGTGTGCGAGCGC | 62.094 | 60.000 | 8.08 | 8.08 | 42.35 | 5.92 |
490 | 492 | 1.000506 | GTACTTCGGAGGTGCTCACAA | 59.999 | 52.381 | 2.65 | 0.00 | 31.08 | 3.33 |
506 | 508 | 0.553819 | TTTTGTGGCACCCCAGTACT | 59.446 | 50.000 | 16.26 | 0.00 | 43.18 | 2.73 |
507 | 509 | 1.272212 | CATTTTGTGGCACCCCAGTAC | 59.728 | 52.381 | 16.26 | 0.00 | 43.18 | 2.73 |
516 | 518 | 5.009110 | TCGTCAATCTTAACATTTTGTGGCA | 59.991 | 36.000 | 0.00 | 0.00 | 0.00 | 4.92 |
527 | 529 | 3.181533 | GCGGTGACTTCGTCAATCTTAAC | 60.182 | 47.826 | 0.00 | 0.00 | 44.49 | 2.01 |
530 | 532 | 1.270094 | TGCGGTGACTTCGTCAATCTT | 60.270 | 47.619 | 0.00 | 0.00 | 44.49 | 2.40 |
621 | 665 | 8.353423 | ACTTGGCATTGATAGTGTATTTTTCT | 57.647 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
633 | 678 | 6.064060 | CCAAATCCTAGACTTGGCATTGATA | 58.936 | 40.000 | 16.36 | 0.00 | 33.65 | 2.15 |
653 | 698 | 7.110155 | GTGAAATTAGTCTACCAGGATCCAAA | 58.890 | 38.462 | 15.82 | 0.00 | 0.00 | 3.28 |
657 | 702 | 5.290386 | CGGTGAAATTAGTCTACCAGGATC | 58.710 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
659 | 704 | 3.118884 | GCGGTGAAATTAGTCTACCAGGA | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
663 | 708 | 3.621715 | CCTTGCGGTGAAATTAGTCTACC | 59.378 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
666 | 711 | 3.695830 | TCCTTGCGGTGAAATTAGTCT | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 3.24 |
680 | 725 | 3.153919 | TCAACATGGTTAGGTTCCTTGC | 58.846 | 45.455 | 0.00 | 0.00 | 34.71 | 4.01 |
768 | 822 | 2.825532 | GCAAGGTGGGTTGTGTTGATAT | 59.174 | 45.455 | 0.00 | 0.00 | 0.00 | 1.63 |
850 | 938 | 0.601311 | AAATATCCTCAGAGCGCGCC | 60.601 | 55.000 | 30.33 | 19.60 | 0.00 | 6.53 |
1342 | 1444 | 2.651361 | ACGCTGGAGACGTCCTTG | 59.349 | 61.111 | 13.01 | 1.43 | 44.30 | 3.61 |
1350 | 1452 | 1.751351 | CCTCAGTATTGACGCTGGAGA | 59.249 | 52.381 | 0.00 | 0.00 | 33.81 | 3.71 |
1359 | 1461 | 2.935238 | GCGTTCTTGGCCTCAGTATTGA | 60.935 | 50.000 | 3.32 | 0.00 | 0.00 | 2.57 |
1365 | 1467 | 2.671177 | CGTGCGTTCTTGGCCTCAG | 61.671 | 63.158 | 3.32 | 0.00 | 0.00 | 3.35 |
1511 | 1613 | 0.471591 | ATGAAGGTGCTTGGGCCAAA | 60.472 | 50.000 | 21.28 | 3.00 | 37.74 | 3.28 |
1641 | 1743 | 4.052229 | CGTCGTCCTCGGCCTTGT | 62.052 | 66.667 | 0.00 | 0.00 | 38.56 | 3.16 |
1700 | 1802 | 1.003355 | CCATGTCTGCGGTGGAAGT | 60.003 | 57.895 | 0.00 | 0.00 | 34.94 | 3.01 |
1715 | 1817 | 4.015406 | TGCGGAGAACGGCACCAT | 62.015 | 61.111 | 0.00 | 0.00 | 44.93 | 3.55 |
1774 | 1876 | 3.206957 | TCGATCATCGTCGCCGGT | 61.207 | 61.111 | 7.00 | 0.00 | 41.35 | 5.28 |
1879 | 1981 | 2.104331 | CGCTAGGGCAGGTACACG | 59.896 | 66.667 | 0.00 | 0.00 | 38.60 | 4.49 |
1911 | 2039 | 2.969827 | TCGAGCAAGCGACCATGA | 59.030 | 55.556 | 0.00 | 0.00 | 35.01 | 3.07 |
1929 | 2059 | 4.797349 | GGTTACGATTAGACAAGTCGAAGG | 59.203 | 45.833 | 0.69 | 0.28 | 38.63 | 3.46 |
1935 | 2065 | 3.841643 | CGGTGGTTACGATTAGACAAGT | 58.158 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1959 | 2096 | 7.367285 | GGCACACTGAGAGTATAGATTAAGAG | 58.633 | 42.308 | 0.00 | 0.00 | 0.00 | 2.85 |
2031 | 2187 | 5.358922 | ACATAATTTGCTTTGCACAAGTGT | 58.641 | 33.333 | 1.79 | 0.00 | 38.71 | 3.55 |
2032 | 2188 | 5.693104 | AGACATAATTTGCTTTGCACAAGTG | 59.307 | 36.000 | 9.40 | 0.00 | 38.71 | 3.16 |
2033 | 2189 | 5.693104 | CAGACATAATTTGCTTTGCACAAGT | 59.307 | 36.000 | 9.40 | 0.00 | 38.71 | 3.16 |
2034 | 2190 | 5.921976 | TCAGACATAATTTGCTTTGCACAAG | 59.078 | 36.000 | 0.00 | 0.00 | 38.71 | 3.16 |
2035 | 2191 | 5.840715 | TCAGACATAATTTGCTTTGCACAA | 58.159 | 33.333 | 0.00 | 0.00 | 38.71 | 3.33 |
2036 | 2192 | 5.450592 | TCAGACATAATTTGCTTTGCACA | 57.549 | 34.783 | 0.00 | 0.00 | 38.71 | 4.57 |
2037 | 2193 | 5.922544 | AGTTCAGACATAATTTGCTTTGCAC | 59.077 | 36.000 | 0.00 | 0.00 | 38.71 | 4.57 |
2038 | 2194 | 6.088016 | AGTTCAGACATAATTTGCTTTGCA | 57.912 | 33.333 | 0.00 | 0.00 | 36.47 | 4.08 |
2039 | 2195 | 6.183359 | CGAAGTTCAGACATAATTTGCTTTGC | 60.183 | 38.462 | 3.32 | 0.00 | 0.00 | 3.68 |
2040 | 2196 | 6.306356 | CCGAAGTTCAGACATAATTTGCTTTG | 59.694 | 38.462 | 3.32 | 0.00 | 0.00 | 2.77 |
2041 | 2197 | 6.016276 | ACCGAAGTTCAGACATAATTTGCTTT | 60.016 | 34.615 | 3.32 | 0.00 | 0.00 | 3.51 |
2042 | 2198 | 5.473504 | ACCGAAGTTCAGACATAATTTGCTT | 59.526 | 36.000 | 3.32 | 0.00 | 0.00 | 3.91 |
2064 | 2220 | 9.558648 | CAACAAACCCGTAGTAATAATTAAACC | 57.441 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2091 | 2255 | 8.677300 | CATGATATTTACACTGCTTACTGGTTT | 58.323 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2101 | 2292 | 8.824159 | AGTACTGATCATGATATTTACACTGC | 57.176 | 34.615 | 8.54 | 0.00 | 0.00 | 4.40 |
2138 | 2329 | 1.961277 | GCAGTCCACACCGTCCAAG | 60.961 | 63.158 | 0.00 | 0.00 | 0.00 | 3.61 |
2141 | 2332 | 2.665185 | GTGCAGTCCACACCGTCC | 60.665 | 66.667 | 0.00 | 0.00 | 44.06 | 4.79 |
2193 | 2395 | 0.463833 | GGCCTTAGTTGCGTATGCCT | 60.464 | 55.000 | 4.05 | 0.00 | 41.78 | 4.75 |
2194 | 2396 | 0.463833 | AGGCCTTAGTTGCGTATGCC | 60.464 | 55.000 | 0.00 | 0.00 | 41.78 | 4.40 |
2196 | 2398 | 2.604046 | AGAGGCCTTAGTTGCGTATG | 57.396 | 50.000 | 6.77 | 0.00 | 0.00 | 2.39 |
2197 | 2399 | 3.629142 | AAAGAGGCCTTAGTTGCGTAT | 57.371 | 42.857 | 6.77 | 0.00 | 31.15 | 3.06 |
2198 | 2400 | 3.071479 | CAAAAGAGGCCTTAGTTGCGTA | 58.929 | 45.455 | 6.77 | 0.00 | 31.15 | 4.42 |
2199 | 2401 | 1.880027 | CAAAAGAGGCCTTAGTTGCGT | 59.120 | 47.619 | 6.77 | 0.00 | 31.15 | 5.24 |
2200 | 2402 | 1.200020 | CCAAAAGAGGCCTTAGTTGCG | 59.800 | 52.381 | 6.77 | 2.49 | 31.15 | 4.85 |
2202 | 2404 | 3.888930 | TGAACCAAAAGAGGCCTTAGTTG | 59.111 | 43.478 | 6.77 | 11.36 | 31.15 | 3.16 |
2203 | 2405 | 4.178956 | TGAACCAAAAGAGGCCTTAGTT | 57.821 | 40.909 | 6.77 | 4.67 | 31.15 | 2.24 |
2204 | 2406 | 3.876309 | TGAACCAAAAGAGGCCTTAGT | 57.124 | 42.857 | 6.77 | 0.00 | 31.15 | 2.24 |
2206 | 2408 | 4.538490 | TCCTATGAACCAAAAGAGGCCTTA | 59.462 | 41.667 | 6.77 | 0.00 | 31.15 | 2.69 |
2208 | 2410 | 2.919602 | TCCTATGAACCAAAAGAGGCCT | 59.080 | 45.455 | 3.86 | 3.86 | 0.00 | 5.19 |
2209 | 2411 | 3.366052 | TCCTATGAACCAAAAGAGGCC | 57.634 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
2210 | 2412 | 5.930135 | TCTATCCTATGAACCAAAAGAGGC | 58.070 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
2211 | 2413 | 8.986929 | AATTCTATCCTATGAACCAAAAGAGG | 57.013 | 34.615 | 0.00 | 0.00 | 0.00 | 3.69 |
2242 | 2444 | 9.844257 | CTCATTTCCTACAAGATTCCTATTTCT | 57.156 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2243 | 2445 | 9.838339 | TCTCATTTCCTACAAGATTCCTATTTC | 57.162 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2245 | 2447 | 9.790344 | CATCTCATTTCCTACAAGATTCCTATT | 57.210 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
2246 | 2448 | 9.163894 | TCATCTCATTTCCTACAAGATTCCTAT | 57.836 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2247 | 2449 | 8.424918 | GTCATCTCATTTCCTACAAGATTCCTA | 58.575 | 37.037 | 0.00 | 0.00 | 0.00 | 2.94 |
2248 | 2450 | 7.092712 | TGTCATCTCATTTCCTACAAGATTCCT | 60.093 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
2249 | 2451 | 7.050377 | TGTCATCTCATTTCCTACAAGATTCC | 58.950 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
2250 | 2452 | 8.557864 | CATGTCATCTCATTTCCTACAAGATTC | 58.442 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
2251 | 2453 | 8.051535 | ACATGTCATCTCATTTCCTACAAGATT | 58.948 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2252 | 2454 | 7.571919 | ACATGTCATCTCATTTCCTACAAGAT | 58.428 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
2253 | 2455 | 6.950842 | ACATGTCATCTCATTTCCTACAAGA | 58.049 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2254 | 2456 | 8.899427 | ATACATGTCATCTCATTTCCTACAAG | 57.101 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
2255 | 2457 | 8.708378 | AGATACATGTCATCTCATTTCCTACAA | 58.292 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
2256 | 2458 | 8.255111 | AGATACATGTCATCTCATTTCCTACA | 57.745 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
2257 | 2459 | 8.755696 | GAGATACATGTCATCTCATTTCCTAC | 57.244 | 38.462 | 24.95 | 8.46 | 45.17 | 3.18 |
2266 | 2468 | 4.832266 | AGGACCTGAGATACATGTCATCTC | 59.168 | 45.833 | 24.04 | 24.04 | 45.76 | 2.75 |
2267 | 2469 | 4.813809 | AGGACCTGAGATACATGTCATCT | 58.186 | 43.478 | 0.00 | 9.42 | 42.89 | 2.90 |
2268 | 2470 | 6.435591 | TCATAGGACCTGAGATACATGTCATC | 59.564 | 42.308 | 0.00 | 4.47 | 42.89 | 2.92 |
2269 | 2471 | 6.318112 | TCATAGGACCTGAGATACATGTCAT | 58.682 | 40.000 | 0.00 | 0.00 | 42.89 | 3.06 |
2270 | 2472 | 5.705400 | TCATAGGACCTGAGATACATGTCA | 58.295 | 41.667 | 0.00 | 0.00 | 42.89 | 3.58 |
2271 | 2473 | 5.772672 | ACTCATAGGACCTGAGATACATGTC | 59.227 | 44.000 | 15.76 | 0.00 | 42.22 | 3.06 |
2272 | 2474 | 5.710646 | ACTCATAGGACCTGAGATACATGT | 58.289 | 41.667 | 15.76 | 2.69 | 42.22 | 3.21 |
2273 | 2475 | 7.389803 | CTACTCATAGGACCTGAGATACATG | 57.610 | 44.000 | 15.76 | 5.02 | 42.22 | 3.21 |
2288 | 2490 | 9.703892 | CATCTTGTTTCCTATTCCTACTCATAG | 57.296 | 37.037 | 0.00 | 0.00 | 0.00 | 2.23 |
2289 | 2491 | 9.213777 | ACATCTTGTTTCCTATTCCTACTCATA | 57.786 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
2290 | 2492 | 8.095452 | ACATCTTGTTTCCTATTCCTACTCAT | 57.905 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
2291 | 2493 | 7.180229 | TGACATCTTGTTTCCTATTCCTACTCA | 59.820 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
2292 | 2494 | 7.556844 | TGACATCTTGTTTCCTATTCCTACTC | 58.443 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
2293 | 2495 | 7.496346 | TGACATCTTGTTTCCTATTCCTACT | 57.504 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2294 | 2496 | 8.738645 | AATGACATCTTGTTTCCTATTCCTAC | 57.261 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2295 | 2497 | 9.177608 | CAAATGACATCTTGTTTCCTATTCCTA | 57.822 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
2296 | 2498 | 7.123247 | CCAAATGACATCTTGTTTCCTATTCCT | 59.877 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
2297 | 2499 | 7.093771 | ACCAAATGACATCTTGTTTCCTATTCC | 60.094 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
2298 | 2500 | 7.830739 | ACCAAATGACATCTTGTTTCCTATTC | 58.169 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
2299 | 2501 | 7.781324 | ACCAAATGACATCTTGTTTCCTATT | 57.219 | 32.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2300 | 2502 | 7.451255 | TCAACCAAATGACATCTTGTTTCCTAT | 59.549 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2301 | 2503 | 6.775142 | TCAACCAAATGACATCTTGTTTCCTA | 59.225 | 34.615 | 0.00 | 0.00 | 0.00 | 2.94 |
2302 | 2504 | 5.598005 | TCAACCAAATGACATCTTGTTTCCT | 59.402 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2303 | 2505 | 5.841810 | TCAACCAAATGACATCTTGTTTCC | 58.158 | 37.500 | 0.00 | 0.00 | 0.00 | 3.13 |
2315 | 2517 | 8.961294 | AAATTCTTTTGATGTCAACCAAATGA | 57.039 | 26.923 | 11.92 | 11.92 | 35.81 | 2.57 |
2339 | 2541 | 7.823745 | AAAAGAGCCTAGACTCAATGAAAAA | 57.176 | 32.000 | 8.89 | 0.00 | 39.26 | 1.94 |
2340 | 2542 | 7.823745 | AAAAAGAGCCTAGACTCAATGAAAA | 57.176 | 32.000 | 8.89 | 0.00 | 39.26 | 2.29 |
2367 | 2569 | 9.973661 | TTCTATCCTCCACATTTCATAGAAAAA | 57.026 | 29.630 | 0.00 | 0.00 | 32.47 | 1.94 |
2368 | 2570 | 9.973661 | TTTCTATCCTCCACATTTCATAGAAAA | 57.026 | 29.630 | 8.71 | 0.00 | 38.76 | 2.29 |
2369 | 2571 | 9.396022 | GTTTCTATCCTCCACATTTCATAGAAA | 57.604 | 33.333 | 7.52 | 7.52 | 39.11 | 2.52 |
2370 | 2572 | 7.993183 | GGTTTCTATCCTCCACATTTCATAGAA | 59.007 | 37.037 | 0.00 | 0.00 | 33.19 | 2.10 |
2371 | 2573 | 7.127186 | TGGTTTCTATCCTCCACATTTCATAGA | 59.873 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
2372 | 2574 | 7.282585 | TGGTTTCTATCCTCCACATTTCATAG | 58.717 | 38.462 | 0.00 | 0.00 | 0.00 | 2.23 |
2373 | 2575 | 7.206789 | TGGTTTCTATCCTCCACATTTCATA | 57.793 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2374 | 2576 | 6.078456 | TGGTTTCTATCCTCCACATTTCAT | 57.922 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2375 | 2577 | 5.512942 | TGGTTTCTATCCTCCACATTTCA | 57.487 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
2376 | 2578 | 6.039829 | GGATTGGTTTCTATCCTCCACATTTC | 59.960 | 42.308 | 0.00 | 0.00 | 40.55 | 2.17 |
2377 | 2579 | 5.893824 | GGATTGGTTTCTATCCTCCACATTT | 59.106 | 40.000 | 0.00 | 0.00 | 40.55 | 2.32 |
2378 | 2580 | 5.449553 | GGATTGGTTTCTATCCTCCACATT | 58.550 | 41.667 | 0.00 | 0.00 | 40.55 | 2.71 |
2379 | 2581 | 5.053978 | GGATTGGTTTCTATCCTCCACAT | 57.946 | 43.478 | 0.00 | 0.00 | 40.55 | 3.21 |
2380 | 2582 | 4.503714 | GGATTGGTTTCTATCCTCCACA | 57.496 | 45.455 | 0.00 | 0.00 | 40.55 | 4.17 |
2412 | 2614 | 9.578576 | CCTTTGATTCATAGGAATGGATTCTTA | 57.421 | 33.333 | 15.80 | 0.00 | 43.69 | 2.10 |
2413 | 2615 | 7.508296 | CCCTTTGATTCATAGGAATGGATTCTT | 59.492 | 37.037 | 20.87 | 0.00 | 43.69 | 2.52 |
2414 | 2616 | 7.008941 | CCCTTTGATTCATAGGAATGGATTCT | 58.991 | 38.462 | 20.87 | 0.00 | 43.69 | 2.40 |
2415 | 2617 | 6.294955 | GCCCTTTGATTCATAGGAATGGATTC | 60.295 | 42.308 | 20.87 | 0.00 | 43.69 | 2.52 |
2416 | 2618 | 5.541484 | GCCCTTTGATTCATAGGAATGGATT | 59.459 | 40.000 | 20.87 | 0.00 | 43.69 | 3.01 |
2417 | 2619 | 5.082425 | GCCCTTTGATTCATAGGAATGGAT | 58.918 | 41.667 | 20.87 | 0.00 | 43.69 | 3.41 |
2418 | 2620 | 4.168675 | AGCCCTTTGATTCATAGGAATGGA | 59.831 | 41.667 | 20.87 | 0.00 | 43.69 | 3.41 |
2419 | 2621 | 4.477249 | AGCCCTTTGATTCATAGGAATGG | 58.523 | 43.478 | 20.87 | 3.33 | 43.69 | 3.16 |
2420 | 2622 | 6.475596 | AAAGCCCTTTGATTCATAGGAATG | 57.524 | 37.500 | 20.87 | 8.54 | 43.69 | 2.67 |
2421 | 2623 | 8.608185 | TTTAAAGCCCTTTGATTCATAGGAAT | 57.392 | 30.769 | 20.87 | 1.48 | 38.85 | 3.01 |
2422 | 2624 | 7.124147 | CCTTTAAAGCCCTTTGATTCATAGGAA | 59.876 | 37.037 | 20.87 | 7.25 | 35.14 | 3.36 |
2423 | 2625 | 6.607198 | CCTTTAAAGCCCTTTGATTCATAGGA | 59.393 | 38.462 | 20.87 | 1.95 | 35.14 | 2.94 |
2424 | 2626 | 6.607198 | TCCTTTAAAGCCCTTTGATTCATAGG | 59.393 | 38.462 | 14.34 | 14.34 | 33.40 | 2.57 |
2425 | 2627 | 7.645058 | TCCTTTAAAGCCCTTTGATTCATAG | 57.355 | 36.000 | 9.86 | 0.00 | 34.23 | 2.23 |
2426 | 2628 | 8.429237 | TTTCCTTTAAAGCCCTTTGATTCATA | 57.571 | 30.769 | 9.86 | 0.00 | 34.23 | 2.15 |
2427 | 2629 | 6.933514 | TTCCTTTAAAGCCCTTTGATTCAT | 57.066 | 33.333 | 9.86 | 0.00 | 34.23 | 2.57 |
2428 | 2630 | 6.739331 | TTTCCTTTAAAGCCCTTTGATTCA | 57.261 | 33.333 | 9.86 | 0.00 | 34.23 | 2.57 |
2480 | 2682 | 9.706529 | AGGCTTCCTTAGAAATTTCATAGAAAT | 57.293 | 29.630 | 19.99 | 0.00 | 0.00 | 2.17 |
2483 | 2685 | 9.614792 | GTTAGGCTTCCTTAGAAATTTCATAGA | 57.385 | 33.333 | 19.99 | 8.26 | 34.61 | 1.98 |
2484 | 2686 | 9.620259 | AGTTAGGCTTCCTTAGAAATTTCATAG | 57.380 | 33.333 | 19.99 | 14.81 | 34.61 | 2.23 |
2485 | 2687 | 9.396022 | CAGTTAGGCTTCCTTAGAAATTTCATA | 57.604 | 33.333 | 19.99 | 6.53 | 34.61 | 2.15 |
2486 | 2688 | 7.340487 | CCAGTTAGGCTTCCTTAGAAATTTCAT | 59.660 | 37.037 | 19.99 | 7.95 | 34.61 | 2.57 |
2487 | 2689 | 6.659242 | CCAGTTAGGCTTCCTTAGAAATTTCA | 59.341 | 38.462 | 19.99 | 3.83 | 34.61 | 2.69 |
2488 | 2690 | 7.089770 | CCAGTTAGGCTTCCTTAGAAATTTC | 57.910 | 40.000 | 10.33 | 10.33 | 34.61 | 2.17 |
2504 | 2706 | 2.858344 | CAATCGACGTAAGCCAGTTAGG | 59.142 | 50.000 | 0.00 | 0.00 | 45.62 | 2.69 |
2560 | 2762 | 2.950309 | TCCTACTCCGAGTTGTCATAGC | 59.050 | 50.000 | 6.31 | 0.00 | 0.00 | 2.97 |
2578 | 2780 | 0.846693 | AGCTGAACCAACAACCTCCT | 59.153 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2591 | 2793 | 2.040278 | AGTTGTCATAGGCCAAGCTGAA | 59.960 | 45.455 | 5.01 | 0.00 | 0.00 | 3.02 |
2592 | 2794 | 1.630369 | AGTTGTCATAGGCCAAGCTGA | 59.370 | 47.619 | 5.01 | 0.00 | 0.00 | 4.26 |
2593 | 2795 | 2.012673 | GAGTTGTCATAGGCCAAGCTG | 58.987 | 52.381 | 5.01 | 0.00 | 0.00 | 4.24 |
2594 | 2796 | 1.406069 | CGAGTTGTCATAGGCCAAGCT | 60.406 | 52.381 | 5.01 | 0.00 | 0.00 | 3.74 |
2595 | 2797 | 1.009829 | CGAGTTGTCATAGGCCAAGC | 58.990 | 55.000 | 5.01 | 0.00 | 0.00 | 4.01 |
2596 | 2798 | 1.207089 | TCCGAGTTGTCATAGGCCAAG | 59.793 | 52.381 | 5.01 | 0.00 | 0.00 | 3.61 |
2597 | 2799 | 1.207089 | CTCCGAGTTGTCATAGGCCAA | 59.793 | 52.381 | 5.01 | 0.00 | 0.00 | 4.52 |
2598 | 2800 | 0.824109 | CTCCGAGTTGTCATAGGCCA | 59.176 | 55.000 | 5.01 | 0.00 | 0.00 | 5.36 |
2599 | 2801 | 0.824759 | ACTCCGAGTTGTCATAGGCC | 59.175 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2600 | 2802 | 2.034812 | CCTACTCCGAGTTGTCATAGGC | 59.965 | 54.545 | 6.31 | 0.00 | 0.00 | 3.93 |
2601 | 2803 | 3.552875 | TCCTACTCCGAGTTGTCATAGG | 58.447 | 50.000 | 6.31 | 6.41 | 0.00 | 2.57 |
2602 | 2804 | 3.566322 | CCTCCTACTCCGAGTTGTCATAG | 59.434 | 52.174 | 6.31 | 0.00 | 0.00 | 2.23 |
2603 | 2805 | 3.053842 | ACCTCCTACTCCGAGTTGTCATA | 60.054 | 47.826 | 6.31 | 0.00 | 0.00 | 2.15 |
2604 | 2806 | 2.291670 | ACCTCCTACTCCGAGTTGTCAT | 60.292 | 50.000 | 6.31 | 0.00 | 0.00 | 3.06 |
2605 | 2807 | 1.075050 | ACCTCCTACTCCGAGTTGTCA | 59.925 | 52.381 | 6.31 | 0.00 | 0.00 | 3.58 |
2606 | 2808 | 1.473278 | CACCTCCTACTCCGAGTTGTC | 59.527 | 57.143 | 6.31 | 0.00 | 0.00 | 3.18 |
2607 | 2809 | 1.546961 | CACCTCCTACTCCGAGTTGT | 58.453 | 55.000 | 6.31 | 0.00 | 0.00 | 3.32 |
2608 | 2810 | 0.818296 | CCACCTCCTACTCCGAGTTG | 59.182 | 60.000 | 6.31 | 4.59 | 0.00 | 3.16 |
2609 | 2811 | 0.408700 | ACCACCTCCTACTCCGAGTT | 59.591 | 55.000 | 6.31 | 0.00 | 0.00 | 3.01 |
2610 | 2812 | 0.408700 | AACCACCTCCTACTCCGAGT | 59.591 | 55.000 | 6.25 | 6.25 | 0.00 | 4.18 |
2611 | 2813 | 0.818296 | CAACCACCTCCTACTCCGAG | 59.182 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2612 | 2814 | 1.255667 | GCAACCACCTCCTACTCCGA | 61.256 | 60.000 | 0.00 | 0.00 | 0.00 | 4.55 |
2613 | 2815 | 1.218316 | GCAACCACCTCCTACTCCG | 59.782 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
2614 | 2816 | 0.984995 | AAGCAACCACCTCCTACTCC | 59.015 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2615 | 2817 | 1.623811 | TGAAGCAACCACCTCCTACTC | 59.376 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
2616 | 2818 | 1.625818 | CTGAAGCAACCACCTCCTACT | 59.374 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
2617 | 2819 | 1.946283 | GCTGAAGCAACCACCTCCTAC | 60.946 | 57.143 | 0.00 | 0.00 | 41.59 | 3.18 |
2618 | 2820 | 0.324943 | GCTGAAGCAACCACCTCCTA | 59.675 | 55.000 | 0.00 | 0.00 | 41.59 | 2.94 |
2619 | 2821 | 1.073897 | GCTGAAGCAACCACCTCCT | 59.926 | 57.895 | 0.00 | 0.00 | 41.59 | 3.69 |
2620 | 2822 | 0.538287 | AAGCTGAAGCAACCACCTCC | 60.538 | 55.000 | 4.90 | 0.00 | 45.16 | 4.30 |
2621 | 2823 | 0.595095 | CAAGCTGAAGCAACCACCTC | 59.405 | 55.000 | 4.90 | 0.00 | 45.16 | 3.85 |
2622 | 2824 | 0.825010 | CCAAGCTGAAGCAACCACCT | 60.825 | 55.000 | 4.90 | 0.00 | 45.16 | 4.00 |
2623 | 2825 | 1.662044 | CCAAGCTGAAGCAACCACC | 59.338 | 57.895 | 4.90 | 0.00 | 45.16 | 4.61 |
2624 | 2826 | 1.006922 | GCCAAGCTGAAGCAACCAC | 60.007 | 57.895 | 4.90 | 0.00 | 45.16 | 4.16 |
2625 | 2827 | 2.202395 | GGCCAAGCTGAAGCAACCA | 61.202 | 57.895 | 0.00 | 0.00 | 45.16 | 3.67 |
2626 | 2828 | 0.609131 | TAGGCCAAGCTGAAGCAACC | 60.609 | 55.000 | 5.01 | 0.34 | 45.16 | 3.77 |
2627 | 2829 | 1.133790 | CATAGGCCAAGCTGAAGCAAC | 59.866 | 52.381 | 5.01 | 0.00 | 45.16 | 4.17 |
2628 | 2830 | 1.004628 | TCATAGGCCAAGCTGAAGCAA | 59.995 | 47.619 | 5.01 | 0.00 | 45.16 | 3.91 |
2629 | 2831 | 0.620030 | TCATAGGCCAAGCTGAAGCA | 59.380 | 50.000 | 5.01 | 0.00 | 45.16 | 3.91 |
2630 | 2832 | 1.020437 | GTCATAGGCCAAGCTGAAGC | 58.980 | 55.000 | 5.01 | 0.00 | 42.49 | 3.86 |
2631 | 2833 | 2.286872 | CTGTCATAGGCCAAGCTGAAG | 58.713 | 52.381 | 5.01 | 0.00 | 0.00 | 3.02 |
2651 | 2853 | 0.249489 | AAGAGCGTGTCACACTGTCC | 60.249 | 55.000 | 6.33 | 0.00 | 31.34 | 4.02 |
2711 | 2913 | 1.962822 | CAGCACCGCAGAGCAGAAA | 60.963 | 57.895 | 0.00 | 0.00 | 0.00 | 2.52 |
2717 | 2919 | 1.020861 | TAATGCACAGCACCGCAGAG | 61.021 | 55.000 | 0.00 | 0.00 | 43.04 | 3.35 |
2720 | 2922 | 0.887247 | AAATAATGCACAGCACCGCA | 59.113 | 45.000 | 0.00 | 0.00 | 43.04 | 5.69 |
2748 | 2950 | 6.687081 | ATTAACGGCTCCGATTCAAATTAA | 57.313 | 33.333 | 15.95 | 7.73 | 42.83 | 1.40 |
2750 | 2952 | 5.576447 | AATTAACGGCTCCGATTCAAATT | 57.424 | 34.783 | 15.95 | 9.45 | 42.83 | 1.82 |
2751 | 2953 | 6.540914 | TCTTAATTAACGGCTCCGATTCAAAT | 59.459 | 34.615 | 15.95 | 4.37 | 42.83 | 2.32 |
2754 | 2956 | 5.013568 | TCTTAATTAACGGCTCCGATTCA | 57.986 | 39.130 | 15.95 | 0.00 | 42.83 | 2.57 |
2756 | 2958 | 5.667466 | TCTTCTTAATTAACGGCTCCGATT | 58.333 | 37.500 | 15.95 | 7.09 | 42.83 | 3.34 |
2757 | 2959 | 5.272283 | TCTTCTTAATTAACGGCTCCGAT | 57.728 | 39.130 | 15.95 | 5.76 | 42.83 | 4.18 |
2758 | 2960 | 4.724074 | TCTTCTTAATTAACGGCTCCGA | 57.276 | 40.909 | 15.95 | 0.00 | 42.83 | 4.55 |
2766 | 2968 | 7.235080 | GGACAACGCTCTTCTTCTTAATTAAC | 58.765 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
2807 | 3017 | 7.004086 | AGTGGATTGAGATGGTTTTTGTCTAA | 58.996 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
2808 | 3018 | 6.542821 | AGTGGATTGAGATGGTTTTTGTCTA | 58.457 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2817 | 3027 | 6.760440 | ATCTGATTAGTGGATTGAGATGGT | 57.240 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
2818 | 3028 | 7.601886 | GTGTATCTGATTAGTGGATTGAGATGG | 59.398 | 40.741 | 0.00 | 0.00 | 0.00 | 3.51 |
2823 | 3033 | 7.041721 | GTGTGTGTATCTGATTAGTGGATTGA | 58.958 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
2833 | 3043 | 9.665719 | TGTTGTATTATGTGTGTGTATCTGATT | 57.334 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2841 | 3051 | 5.008217 | GGTGTGTGTTGTATTATGTGTGTGT | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2842 | 3052 | 5.008118 | TGGTGTGTGTTGTATTATGTGTGTG | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2850 | 3060 | 5.024785 | TCACTGTGGTGTGTGTTGTATTA | 57.975 | 39.130 | 8.11 | 0.00 | 43.41 | 0.98 |
2859 | 3069 | 2.752903 | GGTTTTCTTCACTGTGGTGTGT | 59.247 | 45.455 | 8.11 | 0.00 | 43.41 | 3.72 |
2882 | 3092 | 9.912634 | CAATGATGTTAATGTAAAACCTTGACT | 57.087 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
2913 | 3123 | 3.680196 | GCTAGGGAAGAAGTGATGACCAC | 60.680 | 52.174 | 0.00 | 0.00 | 46.03 | 4.16 |
2915 | 3125 | 2.501723 | TGCTAGGGAAGAAGTGATGACC | 59.498 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2916 | 3126 | 3.895232 | TGCTAGGGAAGAAGTGATGAC | 57.105 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
2928 | 3138 | 1.919240 | TCGAAGTCACTTGCTAGGGA | 58.081 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2929 | 3139 | 2.969628 | ATCGAAGTCACTTGCTAGGG | 57.030 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.