>input_sequence_64722
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----------------------------------------------------TCCTAGAAGCATCCTGAGGCACGCGCCA
GCAGTGCACGGCATGCAGGAGTTCCAGCCAATCGCCGGCCTGGCCGGGCGGCTGTTTGGCGGCGCGGCGGAAT---CGGC
GGGCCTCCTGCGCCGCGGCGGGGCGGCGGCGGCGGCGCAGGAGGAGGTGCGGTGCCCGCGGTGCGACTCGGCCAACACCA
AGTTCTGCTACTACAACAACTACAACCTCTCGCAGCCGCGCCACTTCTGCAAGGGCTGCCGCCGGTACTGGACCAAGGGC
GGCCTCCTCCGCAACGTCCCCGTCGGGGGCGGTTGCCGCAAGCCCAAGCGAAAAGCCGCCGCCGCCTCC------GACGT
CGACAAGGACGTCTCCAGCGTCAATACTGAGGCCAAGAACGCACGCTCTGGCTCCAGTGCTGGCAGCTCCAGCCTCACCT
CCGGTCCCTCGTCCGCGTCGACGAACACCGTCAACGACGTTGGTGCATGTGCCGCGGCCCACTCGAGCGGCGGAAGCACG
CCGTTCAGGGGCTTTGGCCCAAGCACCTTCATGGCGGACGCGCCGACTCTGCAGCCGCCGGCGCCGATGTTCGCCGACCA
GGCGGCCGCGTTCGCGACGCTCTTCGGGACGCCGCTTCCGGCCTTCACCTTCGCGGCGCAGCACAAGGCCGAGGACGACG
TTGCCCCTGCAGTCACACTCACAGAGCAGTCGTCGTCGGCGACTTCCACCGCAGACATGGTGCCGTTCTCCGCACGGTCA
ACTGGCGCAGCGACGGCATCAGCGTCAGACTGGCCACCGGCGACGATGATCGACGCCGGGATATTCGACCTCGCCGGCGC
CGTCGGGAGCGACACGACGTCGTACTGGAACACGGCGAGCTGGACGGACCCGGACGGGACCGTGTACCTGCCCTAGCGCG
CCGC--------------------------CCGCTCAGTCATG--GTCGCTTGCTCGACCTTCGA-------CTTGTCTA
ATCGT---------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G213400
TTCACCAAGTTCGTCATTTTTGAAACTCCCTCAATCGATTAGGGTGTTTGTTTCGGGATTTGGTTCATGATTTCGACTGG
ATTAACGACTTCTGAAATCAA-TAGCAGCAACCACCCTATAAAAACACATTAACAAAGAAGAAACACTGGGGCATTATAG
CAACAATATAGTGCACACAACTACCAGCATAAGAAACTTCCCTACATACACATTGGTTGATTAGTAGATAACACATAATT
ACATTTTCAGAAAAGGCCCACCAAAATACTGTATTATAAAAAGAAAACACACTCAATTATCTCCCACACATGCCAAACCA
AGTAACATTTTCGTATGAAATCGAAAACACCAAACAACACAACGATGCGCACCCAACCCTTCTAGTAATAAGAAGAATCA
CACTTGTCTTTTTTGAACACAATACAATTGTGGATGCTCACATACACACATGTACACTCACTTCTACGAACGCGCTCGCA
CACACCATATCTTGTGAGCACCTCCGAAGTACTGGGGTGCCACAAAATGTTAAGATTGACGAAGTCACCGCAGGCGTCTC
TTAGTCAAGAGGAACGTCTCCTTCCACTGAACAAAC------------------------------------------AT
TGTGAGAAAGATTAAAATAAATTTAGAAAAATAC-ACTATCAATGCCAAGTCTAGGATTTGGATCCTGGTAGACTAATTT
CACCGCAAGGAACCTAACC---ATGTTGAGTTACGCTCACTTCACTCACCACACTTGTCTAT------CTAATGTCTATT
TTGGACGTGTGTTCCACAAAAATATCAACACAACCCACCTTGCAATAAATTTCGCAGCTAAAGGGCAATAG---------
-------------------------TGTGACGTGGCGGCCCGGGGAGGAAGAGGGAGGGCGCGCTCT--GAGGATATTTA
CACAACCGCTTCTGTGATGGAGAGTCCAGGCCGAGCAGAGCAAGATAGATAGCAAGCTTCGAAAGCTAGCTCCCTCCTCG
CGGCAGGCTCCACCATCAGCCACGGCCGCGGCCGCGCAGCACAGCCC---CCTCCTAGAAGCATCCTGAGGCACGCGCCA
GCAGTGCACGGCATGCAGGAGTTCCAGCCAATCGCCGGCCTGGCCGGGCGGCTGTTTGGCGGCGCGGCGGAAT---CGGC
GGGCCTCCTGCGCCGCGGCGGGGCGGCGGCGGCGGCGCAGGAGGAGGTGCGGTGCCCGCGGTGCGACTCGGCCAACACCA
AGTTCTGCTACTACAACAACTACAACCTCTCGCAGCCGCGCCACTTCTGCAAGGGCTGCCGCCGGTACTGGACCAAGGGC
GGCCTCCTCCGCAACGTCCCCGTCGGGGGCGGTTGCCGCAAGCCCAAGCGAAAAGCCGCCGCCGCCTCC------GACGT
CGACAAGGACGTCTCCAGCGTCAATACTGAGGCCAAGAACGCACGCTCTGGCTCCAGTGCTGGCAGCTCCAGCCTCACCT
CCGGTCCCTCGTCCGCGTCGACGAACACCGTCAACGACGTTGGTGCATGTGCCGCGGCCCACTCGAGCGGCGGAAGCACG
CCGTTCAGGGGCTTTGGCCCAAGCACCTTCATGGCGGACGCGCCGACTCTGCAGCCGCCGGCGCCGATGTTCGCCGACCA
GGCGGCCGCGTTCGCGACGCTCTTCGGGACGCCGCTTCCGGCCTTCACCTTCGCGGCGCAGCACAAGGCCGAGGACGACG
TTGCCCCTGCAGTCACACTCACAGAGCAGTCGTCGTCGGCGACTTCCACCGCAGACATGGTGCCGTTCTCCGCACGGTCA
ACTGGCGCAGCGACGGCATCAGCGTCAGACTGGCCACCGGCGACGATGATCGACGCCGGGATATTCGACCTCGCCGGCGC
CGTCGGGAGCGACACGACGTCGTACTGGAACACGGCGAGCTGGACGGACCCGGACGGGACCGTGTACCTGCCCTAGCGCG
CCGC--------------------------CCGCTCAGTCATG--GTCGCTTGCTCGACCTTCGA-------CTTGTCTA
ATCGTAACCACCGCTCTCTTAATCTATA------------------CTCTCAGTGTGCCGGCAGCTTGGCTGCTTCTGT-
GATTCTTTCGATGGGGCAGTTTTTGCACACTTGTGCAAAGCAAATTATGTCTGAACTTCGGTTTAATT--------ATTA
CTACGGGTTTGTTGAAACCAG---------------------------TAAGCAGTGTAAATATCATGATCAGTACTCCT
AATTATAACTTGGACGGTGTGGACTGCAC-----------TCGGCTAGCTCTCTATATATCTTTGTCATGACACAGGCAT
ACGCAACTAAGGCCTCTTTTGGTTCATAGGATAGAATTATCATAGAAATAGGAATCTTGTAGGAAATGAGATGACATGTA
TCTCAGGTCCTATGAGTAGGAATAGGAAACAAGATGTCATTTGGTTGACATCAAAAGAATTTTTTCATTGAGTCTAGGCT
CTTTTTTATTTTTCTATGAAATGTGGAGGATAGAAACCAATCCTATGTAAGAATAAGAATCCATTCCTATGAATCAAAGG
GCTTTAAAGGAAAAAATTCTATAAGAATTCTATCTTCTAGAATTTCTATGAAATTTCTAAGGAAGCCTAACTGGCTTACG
TCGATTGCTTCTCGGAGTAGGAGGTTGTTGGTTCAGCATGGGCTATGACAACTCGGAGTAGGAGGTTGTTGGTTCAGCTT
GGCCTATGACAACTCGGAGTAGGAGGTGGTTGCTTCAGCTTGGCCTATGACAGGACAGTGTGACACGCTCTTCTACTTAC
TCCGGATGTGGTTGTTGCTTTAGCACGACACATTTCTGCTCTGCGGTGCTGTGCATTATTTCTTTCTTTTTAATTTGAAT
CGGAGCCGTTAATTAAGAAGAAGAGCGTTGTCCGATAATTAT--------AAAAAATTAGACAAAAACCATCTCAATCCA
CTAATCAGATACACACACATAATACAACACACACCACAGTGAAGAAAACCTAGTCAAGGTTTTACATTAACATCATTGAC
TCGTGGTCATCACTTCTTCCCTAGCAAGTGACTTCGAT
>chr7B_1
TTCACTAAGTTCCTCATGTTTTTAAACTCCATAATTAATGTGTCCGATTCAGT----ATTTGGTTCATGATTTTGACTGG
GTTAATGACTTCTGAAATCAACTAGCGGCAACCACCCTATAAAAATACATTGACAAAAA--AAACACTGCGGCATTATAG
CAACAATATAGTGCATACAACTACTAGCGTAAGAAACTTTTCTGCATACGTATTGCTTGATTAGTAGATAACACATAATC
ATATCATCAAAAAAGGCCCACTAAAATTCTGTATTATAAAAAGAAAACACACTCAATTATCTCCCGCACATGCCAAACAA
AGTAATATTTTTTCATGAAATCCAAAACACCAA-CAATGCAATGAAACACGCCCAACCCTTCTCGTAATAAAAAGAATCA
CACTTGTCTTTTGTGAACACAGTACAATTGAGATTGATGAAGTCACTGAATATTGAGATAGA------------------
--------------TGAATACCTCCGAGATACTGGGCCGCCACAGAATATTGAGATTGATGAAGTCACCGCAGGCATCTC
TTAGTCAAGAGGAACGTCTCTTTCCACTGAACAAACATTATCTTAGTGAAGAGGAACGTCTCCTCCCATTGAACGAACAT
TGTCAGAAAGCCCGAAATAAATTTGGAAAAATACGACCATCAATGGCAAGTCTAGGACTTGAACTCTAGTGGACTAATTT
CACGACAAGGAACCTAACC---ATC-TGAGTTACGCTCACTTCACTCATCACACCTGTCTATCTAATCCTAATGTCTATT
TTGCACGTGTGTTCCACAAAA-TATCAACACAACCCACCTTGCAATAAATTTCGCAGCTAAAGGGCAATAG---------
-------------------------TATGACGTGGCGGCCCGGGGAGGAAGAGGGAGCGCGCGCTCT--GAGGATATTTA
CACAACCGCTTCTGTGATGGAGAGCCCAGGCCGAGCAGAGC-AGATAGATAGCAAGCTTCGAAAGCTAGCTCCCTCCTCG
CGGCAGGCTCCACCATC-----------------------------------------------CCTGAGGCACGTGCGA
GCAGTGCACGGCATGCAGGAGTTCCAGCCCATCCCCGGCCTGGCCGGGCGGCTGTTCGGCGGCGCGGCGGATCGTCCGGC
GGGCCTCCTCCGCCACGGCGGGGCGCC------------GGAGGAGGTGCGCTGCCCGCGGTGCGACTCGGCCAACACCA
AGTTCTGCTACTACAACAACTACAACCTCTCGCAGCCGCGCCACTTCTGCAAGGGCTGCCGCCGGTACTGGACCAAGGGC
GGCCTCCTCCGCAACGTCCCCGTCGGGGGCGGGTGCCGCAAGCCCAAGCGAAAAGCCGCCGCCGCCTCCTCCTCCGACGT
CGATAAGGACCCCTCCGGCGCCAATAGCGAGGCCAAGAACGCACGCTCCGGCTGCAGTGCTGGCAGCTCCAGCCTCACCT
CCGGTGCCTCGTCCGCGTCGACGAACACCGTCAATGACGTTGGTGCATGTGCCGCGGCCCACTCGAGCGGCGGAAGCATG
CCGTTCACAGGCCTTGGCCCAAGCACCTTCATCGCAGACGCGCCGCCTCTGCAGCCGCCGACGGCGATGTTCACCGACCA
GGCGGCCGCGTTCGCGTCGCTCTTCGGGACGCCGCTTCCGGCCTTCACCTTCTCAGCGCAGCGCAAGGCCGAGGACGACG
TTGCCCCTGCAGTCACATCCACAGAACAGCCGTCGTCGGCGTCTTCCACCGCAGACCTGGCGCCGTTCTCCGCACGGTCA
ACTGGCGCGGCGACGGCATCAGCGTCAGACTGGCCGCCGGCGACGATGATCGACGCCGGGATATTCGACATCGCCGGCGC
CGTCGGGAGCGACACGACGTCGTACTGGAACACGGCGAGCTGGACTGACCCGGACGGGACGGTATACCTGCCCTAGCGCG
ACGCGCGATGACGATCGTGCGCGCGGCCGCCCGCTCAGCCCCGTCGTCGCTTGCTCCAGCTTCGGTCGAAGGCTTGTCTA
ATCGTAACCACCGCTGTCTTAATCTATACTAC---ACCTTCTAATCCTCTCAGTGTGCCGGCAGCTTGGCTGCTTCTGTC
GTTTCTTTCCAT-----------GCT------------AGCAAATTATGGCTGAACTTCATTTTAAAATTTGATTGATTA
CTACGGGTTTGTTGTAGCCAGCGAGCTTTAGTAGCTGGTAGCTACAATTAATCAGTGTAAATATCATGATCGGTACTCCT
AATTCTAATTTCGACGGTGTGGACTGCACTGGTGTACTGATCGGCTAGCTCTCTATATATCTTTGTCATGACACCTGAGG
CGGACGCAA-----------------------------------------------------------------------
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------------------------------------------------------------------CTAACTGGCTTACG
TCGATTGCTTCTCGGAGTAGGAGGTTGTTGGTTCAGCATGGCCTATGATAACTCGGAGTGGGAGTTTGTTGG--------
---------------------------------TTCAGCTTGGCCTATGACAAGACGGTGTGACACGCTCTTCTACTTAC
TCCGGATGTGGTTGTTGCTTTAGCACGACACAGTTCTGTTCCGCGGTGATGTGCATTCTTTCTTTCTTTCTTCTTAGC--
CGGAGCCTTTAATTAAGAAGAAGAGAGTCGTTCGATAATTATCAAACAGAAAAAAAAGAGACAAAAGTCATCACAATCTG
CTGATCAGAT--ACACACACAATACAACGCACACCACAATGAAGAAAACATCGTCGAGGTTTTACATTAACGCCATTGA-
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>chr7D_425
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-------------------------AATTGTAGATGCTCACACACACATA--TACCCTCACTTATACGAACCCGCTCGCA
CACACCATATCCTGTGAGCACCTCCGAGATACTGGAGCGTCACAAAGTATTGAGATTGACGAAGTCACCGCAGGTGTCTC
TTAGTCAAGAGGAACGTCATCTTT------------------------------------------CACTGAACGAACAT
TGTGAGGAAGGCTAAAATAAATTTTAAAAAATACAACCATCGATGCCAAGTCTAGAACTTGAAACCTAATGGACTAACTT
CACCACAAGGAACCTAAGTTCTATC-TGAGTTACCCTCACTTCACTCACCACACTTGCCTAT------CTAATGTCTATT
TTGCACGTGCGTTCCACAAAA-TATCGACGTAACCCACCTTGCAATAAATTTCGCAGCTAAAGGGCAATAGTGTGACGTG
GCGGCCCGGGGAGGAAGAGAGAGAGTGTGACGTGGCGGCCCGGGGAGGAAGAGAGAGAGCGCGCGCTCTGAGGATATTTA
CACAACCGCTTCTGTGATGGAGAGCCCAGGCCGAGCAGAGC-AGATAGATAGCAAGCTTCGAAAGCTAGCTCCCTC---G
CGGCAGGCTCCACCATCAGCCACGGCCGCGGCCGCGCAGCACAGCCCCCTCCTCCTAGAAGCATCCTGAGGCACGTGCGG
GCAGTGCACGGCATGCAGGAGTTCCAGTCCATCCCCGGCCTGGCCGGGCGGCTGTTCGGCGGCGCTGCGGAAT---CGGC
GGGCCTCCTCCGCCGCGGCGGGGCGGCGG---CGGCGCAGGAGGAGGTGCGGTGCCCGCGGTGCGACTCGGCCAACACCA
AGTTCTGCTACTACAACAACTACAACCTCTCGCAGCCGCGCCACTTCTGCAAGGGCTGCCGCCGGTACTGGACCAAGGGC
GGCCTCCTCCGCAACGTCCCCGTCGGGGGCGGGTGCCGCAAGCCCAAGCGAAAAGCCGCCGCCGCCTCCTCC---GACGT
CGAGAAGGACGCCTCCAGCGCCAATAGTGAGGCCAAGAACGCACGCTCTGGCTGCAGTGCTGGCAGCTCCAGCCTCACCT
CCGCTGCCTCGTCCGCGTCGACGAACACCGTCATCGACGCTGGTGCATGTGCCTCGGCCCACTCGAGCGGCGGAAGCATG
CCGTTCACGGGCCTTGGCCCAAGCACCTTCATGGCAGACGCGCCGCCTCTGCAGCCGCCGGCGCCGATGTTCGCCGACCA
AGCGGCCGCGTTCGCGTCGCTCTTCGGGACGCCGCTTCCGGCCTTCTCCTTCTCGGCGCAGCGCAAGGCCGAGGACGACG
TGGCCCCTGCGGTCACACTCACAGAGCAGCCGTCGTCGGCGTCTTCCACCGCAGACCTGGCGCCGTTCTCCGCACGGTCA
ACTGGCGCGGTGACGGCATCAGCGTCAGACTGGCCGCCGGCGACGGTGATCGAAGCTGGGATATTCGACATCGCCGGCGC
CGTCGGGAGCGACACGACGTCGTACTGGAACACGGCGAGCTGGACGGACCCGGACGGGACGGTATACCTGCCCTAGCGCG
ACGTGCGGTGACGATCGTGCGCGCGGTCGCCCGCTCAGCCCCCTCGTGGCTTGCTCGAGCTTCGGTCGAAGCCTGGTCTA
ATCGTAACCACCGCTGTCTTAATCTATACTACTACACCTTCTAATCCTCTCAGTGTGCCGGCAGCTTGGCTGCTTCTGT-
GTTTCTTTCCATGGGGCAGTTTCGCT------------AGCAAATTATGGCTGAACTTCATTTTAAAATTTTATTGATTA
CTACGGGTTTGTTGTAACCAGTGAGCTTTAGTAGCTGGTAGCTACAATTAATCAGTGTAAATATCATGATCAGTACTCCT
GATTATAATTTCGACGGTGTGGACTGCACTGGTGTACTGATCGGCTAGCTCTCTATATATCTTTGTCATGACACCTGAGG
CGGACGCAA-----------------------------------------------------------------------
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------------------------------------------------------------------CTAACTGGCTTACG
TCGATTGCTTCTCGGAGTAGGAGGTTGTTGGTTCAGCATGGCCTATGACAACTCGGAGTGGGAGGTTGTTGG--------
---------------------------------TTCAGCTTGGCCTATGACAAGACAGTGTGACACGCTCTTCTACTTAC
TCCGGATGTGGTTGTTGCTTTAGCACGACACAGTTCTGTTCCGCGGTGCTGTGCATTCTTTCTTTCTTTCTTTTTAGC--
CGGAGCCTTTAATTAAGAAGAAGAGAGTCGTCCGATAATTATCAAACC---AAAAAAAAGACAAAAGTCATCACAATCTG
CTGATCAGAT----ACACACAATACAACGCACACCACAGTGAAGAAAACCTCGTCGAGGTTTTACATTAACGTCATTGAT
TCATCATCATCACTTCTCTCAGATCAAGTGACTTCGA-
>SNPs
-----S------S----S---SS--SSS--SS---SS--SS-SSS-S--SSS-SSSS----------------S------
S----S--------------------S------------------S-----S-----S-SS--------S----------
---------------S--------S---S----------SS--S-----SS----S-----------------------S
-S--SS---S-----------S-----S-------------------------------------S------------S-
-----S-----SSS--------S----------S---SS---S--SS-S-S------------S-------S--------
------------S--------S--------------------------S--S-----------S-------S--------
-----------S---------------SS--------S----------S--S----------------------------
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----------SS------------S------------S-------------------S---S-S---S--S---------
----S-------------------SS------------------------------------------------------
---S-----------------S----------------------------------------------------------
---------------------------------------------------------S----------------------
------------------------S----------------S--------------------------------------
---------------------------------------------------------------------------S--S-
-----------------------------S---S----------------------S-----------------------
---------S-------------------SSS------------------------------------------------
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--------------------------------S-----------------------------------------------
---S-------S--------S-----S--------------------------S--------------------------
-----S------------------------------------------------------------------------S-
-------S----S----------------------S---------S----------------------------------
----------------S-----------------------------------S---------S-----------------
-----------------------------S-----------S--------------S---S-------------------
--------S--------------------------S---------------------------------S----------
------------------------------------------------------------S--S----------------
S-------------------------------------S-SS----------------S-----S---------------
---------------S----------------------------------------------------------------
-S-------S------------SSSSSSSSSSSSSSSS-----------S---------SS-----SS------------
--------------S------------------------------------S----------------------------
--------S--S--------------------------------------------------------------SS-SSS
SS-SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
-----------------------------------------S-----------------S------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S---------------------------
--------------------------------S-----S--S---------------S-----------S-SS--S-SSS
-------S-----------------S--S---------------------------SS--------SS----S-----SS
--S-------SS-------S--------S----------------------S---S---------------S-------S
--S-SS-----------SS-SS-S-------------S
>forward_371
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-------------------------------AAACAACACAACGATGCGCA-----------------------------
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>reverse_2395
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--------------------------------------------------------------------------AGGCAT
ACGCAACTAAGGCC------------------------------------------------------------------
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