Multiple sequence alignment - TraesCS7A01G196000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G196000 chr7A 100.000 1388 0 0 886 2273 155951771 155953158 0.000000e+00 2564.0
1 TraesCS7A01G196000 chr7A 100.000 561 0 0 1 561 155950886 155951446 0.000000e+00 1037.0
2 TraesCS7A01G196000 chr7A 85.016 307 41 5 1386 1690 108749373 108749070 7.890000e-80 307.0
3 TraesCS7A01G196000 chr7A 86.923 260 30 4 1418 1675 16958657 16958400 2.860000e-74 289.0
4 TraesCS7A01G196000 chr7A 95.000 40 2 0 1341 1380 106774267 106774306 1.880000e-06 63.9
5 TraesCS7A01G196000 chr7D 91.560 391 18 7 912 1290 153971900 153972287 2.000000e-145 525.0
6 TraesCS7A01G196000 chr7D 84.359 569 43 26 1 561 153971226 153971756 1.200000e-142 516.0
7 TraesCS7A01G196000 chr7D 85.515 359 30 6 1936 2273 87679306 87678949 2.780000e-94 355.0
8 TraesCS7A01G196000 chr7B 89.620 395 15 10 912 1292 115961779 115962161 1.580000e-131 479.0
9 TraesCS7A01G196000 chr7B 87.205 297 25 9 9 303 115961107 115961392 2.180000e-85 326.0
10 TraesCS7A01G196000 chr7B 89.069 247 20 3 316 561 115961378 115961618 1.320000e-77 300.0
11 TraesCS7A01G196000 chr7B 87.907 215 11 12 1698 1903 115962214 115962422 2.920000e-59 239.0
12 TraesCS7A01G196000 chr3A 86.721 369 35 5 1334 1690 647273385 647273019 4.550000e-107 398.0
13 TraesCS7A01G196000 chr3A 85.593 354 43 8 1341 1690 680738328 680738677 4.610000e-97 364.0
14 TraesCS7A01G196000 chr5D 87.278 338 35 7 1341 1676 379257844 379258175 1.650000e-101 379.0
15 TraesCS7A01G196000 chr5D 84.177 316 37 4 1386 1690 14734179 14734492 6.140000e-76 294.0
16 TraesCS7A01G196000 chrUn 86.080 352 44 4 1341 1690 103379730 103379382 7.670000e-100 374.0
17 TraesCS7A01G196000 chr6A 84.737 380 38 10 1334 1696 600825434 600825058 1.660000e-96 363.0
18 TraesCS7A01G196000 chr6A 87.908 306 29 7 1388 1690 452958258 452958558 9.990000e-94 353.0
19 TraesCS7A01G196000 chr3D 85.237 359 31 7 1936 2273 582541053 582540696 1.290000e-92 350.0
20 TraesCS7A01G196000 chr2A 83.844 359 46 7 1334 1682 103237007 103237363 4.680000e-87 331.0
21 TraesCS7A01G196000 chr2A 86.691 278 34 3 1334 1610 122137894 122137619 2.840000e-79 305.0
22 TraesCS7A01G196000 chr2D 85.251 339 29 8 1955 2273 364829796 364830133 1.680000e-86 329.0
23 TraesCS7A01G196000 chr1D 86.120 317 23 8 1978 2273 77747068 77746752 2.820000e-84 322.0
24 TraesCS7A01G196000 chr4A 82.857 350 47 10 1350 1690 113319000 113319345 3.670000e-78 302.0
25 TraesCS7A01G196000 chr1B 84.797 296 25 8 1928 2203 545708136 545707841 1.720000e-71 279.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G196000 chr7A 155950886 155953158 2272 False 1800.5 2564 100.00000 1 2273 2 chr7A.!!$F2 2272
1 TraesCS7A01G196000 chr7D 153971226 153972287 1061 False 520.5 525 87.95950 1 1290 2 chr7D.!!$F1 1289
2 TraesCS7A01G196000 chr7B 115961107 115962422 1315 False 336.0 479 88.45025 9 1903 4 chr7B.!!$F1 1894

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
938 986 0.038166 ACACAAGGCATCCATCCGTT 59.962 50.0 0.0 0.0 0.0 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1944 2030 0.033366 AAATTTCGGCAAGCACACCC 59.967 50.0 0.0 0.0 0.0 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.034532 TGCCTACGTCCTCGGACA 59.965 61.111 15.77 0.00 44.77 4.02
33 34 2.338015 TGCCTACGTCCTCGGACAC 61.338 63.158 15.77 1.09 44.77 3.67
97 98 5.184892 AGCCAGACAGGATAGAACAAAAT 57.815 39.130 0.00 0.00 41.22 1.82
100 101 7.349598 AGCCAGACAGGATAGAACAAAATAAT 58.650 34.615 0.00 0.00 41.22 1.28
101 102 8.494433 AGCCAGACAGGATAGAACAAAATAATA 58.506 33.333 0.00 0.00 41.22 0.98
102 103 9.289782 GCCAGACAGGATAGAACAAAATAATAT 57.710 33.333 0.00 0.00 41.22 1.28
190 191 3.788766 GTGAAACGAGCGCGCCAT 61.789 61.111 30.33 10.88 42.48 4.40
249 251 1.881591 CACCGTCCCGTCCTTAAAAA 58.118 50.000 0.00 0.00 0.00 1.94
269 272 2.589442 GCCAAACGGACCGTCACA 60.589 61.111 22.00 0.00 39.99 3.58
271 274 2.604174 CCAAACGGACCGTCACAGC 61.604 63.158 22.00 0.00 39.99 4.40
281 284 1.594293 CGTCACAGCTTGTTCCCGT 60.594 57.895 0.00 0.00 0.00 5.28
303 306 1.605753 ACCGAAAGCAGTTCCTTTCC 58.394 50.000 8.55 0.00 44.89 3.13
304 307 1.133915 ACCGAAAGCAGTTCCTTTCCA 60.134 47.619 8.55 0.00 44.89 3.53
305 308 2.162681 CCGAAAGCAGTTCCTTTCCAT 58.837 47.619 8.55 0.00 44.89 3.41
306 309 2.095059 CCGAAAGCAGTTCCTTTCCATG 60.095 50.000 8.55 0.00 44.89 3.66
307 310 2.554032 CGAAAGCAGTTCCTTTCCATGT 59.446 45.455 8.55 0.00 44.89 3.21
308 311 3.365364 CGAAAGCAGTTCCTTTCCATGTC 60.365 47.826 8.55 0.00 44.89 3.06
309 312 2.957402 AGCAGTTCCTTTCCATGTCA 57.043 45.000 0.00 0.00 0.00 3.58
310 313 3.228188 AGCAGTTCCTTTCCATGTCAA 57.772 42.857 0.00 0.00 0.00 3.18
311 314 3.771216 AGCAGTTCCTTTCCATGTCAAT 58.229 40.909 0.00 0.00 0.00 2.57
312 315 4.922206 AGCAGTTCCTTTCCATGTCAATA 58.078 39.130 0.00 0.00 0.00 1.90
313 316 5.324409 AGCAGTTCCTTTCCATGTCAATAA 58.676 37.500 0.00 0.00 0.00 1.40
314 317 5.774690 AGCAGTTCCTTTCCATGTCAATAAA 59.225 36.000 0.00 0.00 0.00 1.40
315 318 6.267471 AGCAGTTCCTTTCCATGTCAATAAAA 59.733 34.615 0.00 0.00 0.00 1.52
316 319 6.928492 GCAGTTCCTTTCCATGTCAATAAAAA 59.072 34.615 0.00 0.00 0.00 1.94
351 354 2.262292 CGCCTCCCGACCGTTTTA 59.738 61.111 0.00 0.00 40.02 1.52
366 369 3.548014 CCGTTTTAAGTCAGCACAACAGG 60.548 47.826 0.00 0.00 0.00 4.00
368 371 1.225855 TTAAGTCAGCACAACAGGCG 58.774 50.000 0.00 0.00 36.08 5.52
442 446 4.745116 GGAAGCTTCCCCAACCTC 57.255 61.111 31.91 6.77 41.62 3.85
916 964 2.494918 CCTCCCGTTCCTACGCAG 59.505 66.667 0.00 0.00 46.27 5.18
925 973 0.602638 TTCCTACGCAGGCACACAAG 60.603 55.000 0.00 0.00 42.30 3.16
938 986 0.038166 ACACAAGGCATCCATCCGTT 59.962 50.000 0.00 0.00 0.00 4.44
960 1008 0.895530 TCGGTTCCTAAGTCAGCAGG 59.104 55.000 0.00 0.00 0.00 4.85
986 1048 0.599558 TCATCGACGGTCGTTCCTTT 59.400 50.000 27.53 6.71 41.35 3.11
987 1049 0.989890 CATCGACGGTCGTTCCTTTC 59.010 55.000 27.53 0.00 41.35 2.62
988 1050 0.455633 ATCGACGGTCGTTCCTTTCG 60.456 55.000 27.53 2.16 41.35 3.46
1229 1291 3.191539 GAAGAGCGCCGGCAAGAG 61.192 66.667 28.98 11.41 43.41 2.85
1298 1373 4.747108 GGTCATCTGAGACGTTTGGATATG 59.253 45.833 0.00 0.00 39.42 1.78
1305 1380 6.097696 TCTGAGACGTTTGGATATGTATGGAA 59.902 38.462 0.00 0.00 0.00 3.53
1307 1382 6.929049 TGAGACGTTTGGATATGTATGGAATC 59.071 38.462 0.00 0.00 0.00 2.52
1330 1408 4.693283 GTCATGGACCGATGATGTTCTTA 58.307 43.478 9.06 0.00 34.86 2.10
1331 1409 5.300752 GTCATGGACCGATGATGTTCTTAT 58.699 41.667 9.06 0.00 34.86 1.73
1332 1410 6.455647 GTCATGGACCGATGATGTTCTTATA 58.544 40.000 9.06 0.00 34.86 0.98
1333 1411 6.587990 GTCATGGACCGATGATGTTCTTATAG 59.412 42.308 9.06 0.00 34.86 1.31
1334 1412 6.267699 TCATGGACCGATGATGTTCTTATAGT 59.732 38.462 0.00 0.00 0.00 2.12
1335 1413 6.479972 TGGACCGATGATGTTCTTATAGTT 57.520 37.500 0.00 0.00 0.00 2.24
1336 1414 6.884832 TGGACCGATGATGTTCTTATAGTTT 58.115 36.000 0.00 0.00 0.00 2.66
1337 1415 8.014070 TGGACCGATGATGTTCTTATAGTTTA 57.986 34.615 0.00 0.00 0.00 2.01
1338 1416 8.647796 TGGACCGATGATGTTCTTATAGTTTAT 58.352 33.333 0.00 0.00 0.00 1.40
1367 1445 9.286170 GTTCTAGAACTTTTTCTAATCCCAACT 57.714 33.333 25.30 0.00 42.61 3.16
1378 1456 9.862149 TTTTCTAATCCCAACTAAAAAGTCTCT 57.138 29.630 0.00 0.00 0.00 3.10
1381 1459 9.322769 TCTAATCCCAACTAAAAAGTCTCTAGT 57.677 33.333 0.00 0.00 0.00 2.57
1382 1460 9.372369 CTAATCCCAACTAAAAAGTCTCTAGTG 57.628 37.037 0.00 0.00 0.00 2.74
1383 1461 5.548406 TCCCAACTAAAAAGTCTCTAGTGC 58.452 41.667 0.00 0.00 0.00 4.40
1384 1462 5.307196 TCCCAACTAAAAAGTCTCTAGTGCT 59.693 40.000 0.00 0.00 0.00 4.40
1385 1463 5.998363 CCCAACTAAAAAGTCTCTAGTGCTT 59.002 40.000 0.00 0.00 0.00 3.91
1386 1464 7.015877 TCCCAACTAAAAAGTCTCTAGTGCTTA 59.984 37.037 0.00 0.00 0.00 3.09
1387 1465 7.660208 CCCAACTAAAAAGTCTCTAGTGCTTAA 59.340 37.037 0.00 0.00 0.00 1.85
1388 1466 9.052759 CCAACTAAAAAGTCTCTAGTGCTTAAA 57.947 33.333 0.00 0.00 0.00 1.52
1395 1473 7.731882 AAGTCTCTAGTGCTTAAAAAGTTCC 57.268 36.000 0.00 0.00 0.00 3.62
1396 1474 7.068686 AGTCTCTAGTGCTTAAAAAGTTCCT 57.931 36.000 0.00 0.00 0.00 3.36
1397 1475 7.510407 AGTCTCTAGTGCTTAAAAAGTTCCTT 58.490 34.615 0.00 0.00 0.00 3.36
1398 1476 7.658167 AGTCTCTAGTGCTTAAAAAGTTCCTTC 59.342 37.037 0.00 0.00 0.00 3.46
1399 1477 6.935208 TCTCTAGTGCTTAAAAAGTTCCTTCC 59.065 38.462 0.00 0.00 0.00 3.46
1400 1478 6.838382 TCTAGTGCTTAAAAAGTTCCTTCCT 58.162 36.000 0.00 0.00 0.00 3.36
1401 1479 7.970102 TCTAGTGCTTAAAAAGTTCCTTCCTA 58.030 34.615 0.00 0.00 0.00 2.94
1402 1480 8.603304 TCTAGTGCTTAAAAAGTTCCTTCCTAT 58.397 33.333 0.00 0.00 0.00 2.57
1403 1481 9.232473 CTAGTGCTTAAAAAGTTCCTTCCTATT 57.768 33.333 0.00 0.00 0.00 1.73
1404 1482 8.478775 AGTGCTTAAAAAGTTCCTTCCTATTT 57.521 30.769 0.00 0.00 0.00 1.40
1405 1483 8.360390 AGTGCTTAAAAAGTTCCTTCCTATTTG 58.640 33.333 0.00 0.00 0.00 2.32
1406 1484 8.141909 GTGCTTAAAAAGTTCCTTCCTATTTGT 58.858 33.333 0.00 0.00 0.00 2.83
1407 1485 8.700973 TGCTTAAAAAGTTCCTTCCTATTTGTT 58.299 29.630 0.00 0.00 0.00 2.83
1408 1486 9.542462 GCTTAAAAAGTTCCTTCCTATTTGTTT 57.458 29.630 0.00 0.00 0.00 2.83
1412 1490 9.599866 AAAAAGTTCCTTCCTATTTGTTTTCAG 57.400 29.630 0.00 0.00 0.00 3.02
1413 1491 8.533569 AAAGTTCCTTCCTATTTGTTTTCAGA 57.466 30.769 0.00 0.00 0.00 3.27
1414 1492 7.751768 AGTTCCTTCCTATTTGTTTTCAGAG 57.248 36.000 0.00 0.00 0.00 3.35
1415 1493 7.518188 AGTTCCTTCCTATTTGTTTTCAGAGA 58.482 34.615 0.00 0.00 0.00 3.10
1416 1494 8.166726 AGTTCCTTCCTATTTGTTTTCAGAGAT 58.833 33.333 0.00 0.00 0.00 2.75
1417 1495 8.797438 GTTCCTTCCTATTTGTTTTCAGAGATT 58.203 33.333 0.00 0.00 0.00 2.40
1433 1511 9.503399 TTTCAGAGATTAAAAAGTCCTTAGTCC 57.497 33.333 0.00 0.00 0.00 3.85
1434 1512 7.621796 TCAGAGATTAAAAAGTCCTTAGTCCC 58.378 38.462 0.00 0.00 0.00 4.46
1435 1513 7.458170 TCAGAGATTAAAAAGTCCTTAGTCCCT 59.542 37.037 0.00 0.00 0.00 4.20
1436 1514 8.103935 CAGAGATTAAAAAGTCCTTAGTCCCTT 58.896 37.037 0.00 0.00 0.00 3.95
1437 1515 8.670490 AGAGATTAAAAAGTCCTTAGTCCCTTT 58.330 33.333 0.00 0.00 0.00 3.11
1438 1516 8.865420 AGATTAAAAAGTCCTTAGTCCCTTTC 57.135 34.615 0.00 0.00 0.00 2.62
1439 1517 8.670490 AGATTAAAAAGTCCTTAGTCCCTTTCT 58.330 33.333 0.00 0.00 0.00 2.52
1440 1518 9.955102 GATTAAAAAGTCCTTAGTCCCTTTCTA 57.045 33.333 0.00 0.00 0.00 2.10
1441 1519 9.961264 ATTAAAAAGTCCTTAGTCCCTTTCTAG 57.039 33.333 0.00 0.00 0.00 2.43
1442 1520 7.628501 AAAAAGTCCTTAGTCCCTTTCTAGA 57.371 36.000 0.00 0.00 0.00 2.43
1443 1521 6.860790 AAAGTCCTTAGTCCCTTTCTAGAG 57.139 41.667 0.00 0.00 0.00 2.43
1444 1522 5.799978 AGTCCTTAGTCCCTTTCTAGAGA 57.200 43.478 0.00 0.00 0.00 3.10
1445 1523 6.349897 AGTCCTTAGTCCCTTTCTAGAGAT 57.650 41.667 0.00 0.00 0.00 2.75
1446 1524 6.747931 AGTCCTTAGTCCCTTTCTAGAGATT 58.252 40.000 0.00 0.00 0.00 2.40
1447 1525 7.884891 AGTCCTTAGTCCCTTTCTAGAGATTA 58.115 38.462 0.00 0.00 0.00 1.75
1448 1526 8.516198 AGTCCTTAGTCCCTTTCTAGAGATTAT 58.484 37.037 0.00 0.00 0.00 1.28
1449 1527 9.150028 GTCCTTAGTCCCTTTCTAGAGATTATT 57.850 37.037 0.00 0.00 0.00 1.40
1465 1543 8.757982 AGAGATTATTAAATGACCATGTTGCT 57.242 30.769 0.00 0.00 0.00 3.91
1466 1544 9.193806 AGAGATTATTAAATGACCATGTTGCTT 57.806 29.630 0.00 0.00 0.00 3.91
1467 1545 9.455847 GAGATTATTAAATGACCATGTTGCTTC 57.544 33.333 0.00 0.00 0.00 3.86
1468 1546 9.193806 AGATTATTAAATGACCATGTTGCTTCT 57.806 29.630 0.00 0.00 0.00 2.85
1471 1549 7.944729 ATTAAATGACCATGTTGCTTCTAGT 57.055 32.000 0.00 0.00 0.00 2.57
1473 1551 9.632638 ATTAAATGACCATGTTGCTTCTAGTAT 57.367 29.630 0.00 0.00 0.00 2.12
1504 1582 7.742556 AAATAACAATCAAACAAACCATGGG 57.257 32.000 18.09 0.00 0.00 4.00
1505 1583 6.678568 ATAACAATCAAACAAACCATGGGA 57.321 33.333 18.09 1.42 0.00 4.37
1506 1584 5.565455 AACAATCAAACAAACCATGGGAT 57.435 34.783 18.09 4.06 0.00 3.85
1507 1585 4.897140 ACAATCAAACAAACCATGGGATG 58.103 39.130 18.09 16.47 0.00 3.51
1523 1601 4.251246 TGGCGGGCCATTGAATAC 57.749 55.556 8.62 0.00 41.89 1.89
1524 1602 1.304617 TGGCGGGCCATTGAATACA 59.695 52.632 8.62 0.00 41.89 2.29
1525 1603 0.106268 TGGCGGGCCATTGAATACAT 60.106 50.000 8.62 0.00 41.89 2.29
1526 1604 0.314935 GGCGGGCCATTGAATACATG 59.685 55.000 4.39 0.00 35.81 3.21
1527 1605 0.314935 GCGGGCCATTGAATACATGG 59.685 55.000 4.39 0.00 38.45 3.66
1528 1606 1.979855 CGGGCCATTGAATACATGGA 58.020 50.000 4.39 0.00 37.66 3.41
1529 1607 1.881973 CGGGCCATTGAATACATGGAG 59.118 52.381 4.39 0.00 37.66 3.86
1530 1608 2.487086 CGGGCCATTGAATACATGGAGA 60.487 50.000 4.39 0.00 37.66 3.71
1531 1609 3.771216 GGGCCATTGAATACATGGAGAT 58.229 45.455 4.39 0.00 37.66 2.75
1532 1610 3.508793 GGGCCATTGAATACATGGAGATG 59.491 47.826 4.39 0.00 37.66 2.90
1533 1611 3.057033 GGCCATTGAATACATGGAGATGC 60.057 47.826 0.00 0.00 37.66 3.91
1534 1612 3.570975 GCCATTGAATACATGGAGATGCA 59.429 43.478 3.01 0.00 37.66 3.96
1535 1613 4.219944 GCCATTGAATACATGGAGATGCAT 59.780 41.667 0.00 0.00 37.66 3.96
1536 1614 5.279306 GCCATTGAATACATGGAGATGCATT 60.279 40.000 0.00 0.00 37.66 3.56
1537 1615 6.156519 CCATTGAATACATGGAGATGCATTG 58.843 40.000 0.00 0.00 37.66 2.82
1538 1616 6.239204 CCATTGAATACATGGAGATGCATTGT 60.239 38.462 0.00 3.12 37.66 2.71
1539 1617 6.778834 TTGAATACATGGAGATGCATTGTT 57.221 33.333 0.00 0.00 32.14 2.83
1540 1618 6.139048 TGAATACATGGAGATGCATTGTTG 57.861 37.500 0.00 0.00 32.14 3.33
1541 1619 5.887035 TGAATACATGGAGATGCATTGTTGA 59.113 36.000 0.00 0.00 32.14 3.18
1542 1620 6.377712 TGAATACATGGAGATGCATTGTTGAA 59.622 34.615 0.00 0.00 32.14 2.69
1543 1621 6.778834 ATACATGGAGATGCATTGTTGAAA 57.221 33.333 0.00 0.00 32.14 2.69
1544 1622 5.471556 ACATGGAGATGCATTGTTGAAAA 57.528 34.783 0.00 0.00 32.14 2.29
1545 1623 5.856156 ACATGGAGATGCATTGTTGAAAAA 58.144 33.333 0.00 0.00 32.14 1.94
1546 1624 5.929992 ACATGGAGATGCATTGTTGAAAAAG 59.070 36.000 0.00 0.00 32.14 2.27
1547 1625 5.534207 TGGAGATGCATTGTTGAAAAAGT 57.466 34.783 0.00 0.00 0.00 2.66
1548 1626 5.531634 TGGAGATGCATTGTTGAAAAAGTC 58.468 37.500 0.00 0.00 0.00 3.01
1549 1627 4.925646 GGAGATGCATTGTTGAAAAAGTCC 59.074 41.667 0.00 0.00 0.00 3.85
1550 1628 4.886579 AGATGCATTGTTGAAAAAGTCCC 58.113 39.130 0.00 0.00 0.00 4.46
1551 1629 3.467374 TGCATTGTTGAAAAAGTCCCC 57.533 42.857 0.00 0.00 0.00 4.81
1552 1630 2.768527 TGCATTGTTGAAAAAGTCCCCA 59.231 40.909 0.00 0.00 0.00 4.96
1553 1631 3.198635 TGCATTGTTGAAAAAGTCCCCAA 59.801 39.130 0.00 0.00 0.00 4.12
1554 1632 4.195416 GCATTGTTGAAAAAGTCCCCAAA 58.805 39.130 0.00 0.00 0.00 3.28
1555 1633 4.637977 GCATTGTTGAAAAAGTCCCCAAAA 59.362 37.500 0.00 0.00 0.00 2.44
1556 1634 5.124617 GCATTGTTGAAAAAGTCCCCAAAAA 59.875 36.000 0.00 0.00 0.00 1.94
1557 1635 6.677675 GCATTGTTGAAAAAGTCCCCAAAAAG 60.678 38.462 0.00 0.00 0.00 2.27
1558 1636 5.746990 TGTTGAAAAAGTCCCCAAAAAGA 57.253 34.783 0.00 0.00 0.00 2.52
1559 1637 5.483811 TGTTGAAAAAGTCCCCAAAAAGAC 58.516 37.500 0.00 0.00 0.00 3.01
1560 1638 5.247337 TGTTGAAAAAGTCCCCAAAAAGACT 59.753 36.000 0.00 0.00 45.18 3.24
1561 1639 5.592104 TGAAAAAGTCCCCAAAAAGACTC 57.408 39.130 0.00 0.00 42.48 3.36
1562 1640 5.269189 TGAAAAAGTCCCCAAAAAGACTCT 58.731 37.500 0.00 0.00 42.48 3.24
1563 1641 5.719563 TGAAAAAGTCCCCAAAAAGACTCTT 59.280 36.000 0.00 0.00 42.48 2.85
1564 1642 5.854010 AAAAGTCCCCAAAAAGACTCTTC 57.146 39.130 0.00 0.00 42.48 2.87
1565 1643 4.797912 AAGTCCCCAAAAAGACTCTTCT 57.202 40.909 0.00 0.00 42.48 2.85
1566 1644 4.797912 AGTCCCCAAAAAGACTCTTCTT 57.202 40.909 0.00 0.00 44.53 2.52
1567 1645 5.906772 AGTCCCCAAAAAGACTCTTCTTA 57.093 39.130 0.00 0.00 41.56 2.10
1568 1646 6.262056 AGTCCCCAAAAAGACTCTTCTTAA 57.738 37.500 0.00 0.00 41.56 1.85
1569 1647 6.299922 AGTCCCCAAAAAGACTCTTCTTAAG 58.700 40.000 0.00 0.00 41.56 1.85
1570 1648 6.101296 AGTCCCCAAAAAGACTCTTCTTAAGA 59.899 38.462 0.00 0.00 41.56 2.10
1571 1649 6.771267 GTCCCCAAAAAGACTCTTCTTAAGAA 59.229 38.462 16.85 16.85 41.56 2.52
1572 1650 7.448777 GTCCCCAAAAAGACTCTTCTTAAGAAT 59.551 37.037 18.02 3.93 41.56 2.40
1573 1651 7.665974 TCCCCAAAAAGACTCTTCTTAAGAATC 59.334 37.037 18.02 12.80 41.56 2.52
1574 1652 7.667635 CCCCAAAAAGACTCTTCTTAAGAATCT 59.332 37.037 18.02 14.73 45.24 2.40
1589 1667 9.892130 TCTTAAGAATCTTCTTCATTTAGTCCC 57.108 33.333 8.40 0.00 43.72 4.46
1590 1668 9.672673 CTTAAGAATCTTCTTCATTTAGTCCCA 57.327 33.333 8.40 0.00 43.72 4.37
1592 1670 8.572855 AAGAATCTTCTTCATTTAGTCCCAAG 57.427 34.615 0.00 0.00 43.72 3.61
1593 1671 7.694093 AGAATCTTCTTCATTTAGTCCCAAGT 58.306 34.615 0.00 0.00 32.55 3.16
1594 1672 7.609532 AGAATCTTCTTCATTTAGTCCCAAGTG 59.390 37.037 0.00 0.00 32.55 3.16
1595 1673 6.187727 TCTTCTTCATTTAGTCCCAAGTGT 57.812 37.500 0.00 0.00 0.00 3.55
1596 1674 6.231211 TCTTCTTCATTTAGTCCCAAGTGTC 58.769 40.000 0.00 0.00 0.00 3.67
1597 1675 5.825593 TCTTCATTTAGTCCCAAGTGTCT 57.174 39.130 0.00 0.00 0.00 3.41
1598 1676 6.928348 TCTTCATTTAGTCCCAAGTGTCTA 57.072 37.500 0.00 0.00 0.00 2.59
1599 1677 6.936279 TCTTCATTTAGTCCCAAGTGTCTAG 58.064 40.000 0.00 0.00 0.00 2.43
1600 1678 6.497259 TCTTCATTTAGTCCCAAGTGTCTAGT 59.503 38.462 0.00 0.00 0.00 2.57
1601 1679 6.681729 TCATTTAGTCCCAAGTGTCTAGTT 57.318 37.500 0.00 0.00 0.00 2.24
1602 1680 6.698380 TCATTTAGTCCCAAGTGTCTAGTTC 58.302 40.000 0.00 0.00 0.00 3.01
1603 1681 6.269077 TCATTTAGTCCCAAGTGTCTAGTTCA 59.731 38.462 0.00 0.00 0.00 3.18
1604 1682 5.723672 TTAGTCCCAAGTGTCTAGTTCAG 57.276 43.478 0.00 0.00 0.00 3.02
1605 1683 3.577919 AGTCCCAAGTGTCTAGTTCAGT 58.422 45.455 0.00 0.00 0.00 3.41
1606 1684 3.574826 AGTCCCAAGTGTCTAGTTCAGTC 59.425 47.826 0.00 0.00 0.00 3.51
1607 1685 2.897969 TCCCAAGTGTCTAGTTCAGTCC 59.102 50.000 0.00 0.00 0.00 3.85
1608 1686 2.028020 CCCAAGTGTCTAGTTCAGTCCC 60.028 54.545 0.00 0.00 0.00 4.46
1609 1687 2.900546 CCAAGTGTCTAGTTCAGTCCCT 59.099 50.000 0.00 0.00 0.00 4.20
1610 1688 4.087182 CCAAGTGTCTAGTTCAGTCCCTA 58.913 47.826 0.00 0.00 0.00 3.53
1611 1689 4.527038 CCAAGTGTCTAGTTCAGTCCCTAA 59.473 45.833 0.00 0.00 0.00 2.69
1612 1690 5.011738 CCAAGTGTCTAGTTCAGTCCCTAAA 59.988 44.000 0.00 0.00 0.00 1.85
1613 1691 6.463897 CCAAGTGTCTAGTTCAGTCCCTAAAA 60.464 42.308 0.00 0.00 0.00 1.52
1614 1692 6.936968 AGTGTCTAGTTCAGTCCCTAAAAT 57.063 37.500 0.00 0.00 0.00 1.82
1615 1693 8.311836 CAAGTGTCTAGTTCAGTCCCTAAAATA 58.688 37.037 0.00 0.00 0.00 1.40
1616 1694 8.611051 AGTGTCTAGTTCAGTCCCTAAAATAT 57.389 34.615 0.00 0.00 0.00 1.28
1617 1695 8.697292 AGTGTCTAGTTCAGTCCCTAAAATATC 58.303 37.037 0.00 0.00 0.00 1.63
1618 1696 7.927092 GTGTCTAGTTCAGTCCCTAAAATATCC 59.073 40.741 0.00 0.00 0.00 2.59
1619 1697 7.070821 TGTCTAGTTCAGTCCCTAAAATATCCC 59.929 40.741 0.00 0.00 0.00 3.85
1620 1698 7.290481 GTCTAGTTCAGTCCCTAAAATATCCCT 59.710 40.741 0.00 0.00 0.00 4.20
1621 1699 6.502074 AGTTCAGTCCCTAAAATATCCCTC 57.498 41.667 0.00 0.00 0.00 4.30
1622 1700 5.369993 AGTTCAGTCCCTAAAATATCCCTCC 59.630 44.000 0.00 0.00 0.00 4.30
1623 1701 4.240323 TCAGTCCCTAAAATATCCCTCCC 58.760 47.826 0.00 0.00 0.00 4.30
1624 1702 3.008049 CAGTCCCTAAAATATCCCTCCCG 59.992 52.174 0.00 0.00 0.00 5.14
1625 1703 2.977580 GTCCCTAAAATATCCCTCCCGT 59.022 50.000 0.00 0.00 0.00 5.28
1626 1704 3.393609 GTCCCTAAAATATCCCTCCCGTT 59.606 47.826 0.00 0.00 0.00 4.44
1627 1705 4.049318 TCCCTAAAATATCCCTCCCGTTT 58.951 43.478 0.00 0.00 0.00 3.60
1628 1706 4.141344 TCCCTAAAATATCCCTCCCGTTTG 60.141 45.833 0.00 0.00 0.00 2.93
1629 1707 4.141344 CCCTAAAATATCCCTCCCGTTTGA 60.141 45.833 0.00 0.00 0.00 2.69
1630 1708 5.457633 CCCTAAAATATCCCTCCCGTTTGAT 60.458 44.000 0.00 0.00 0.00 2.57
1631 1709 6.240060 CCCTAAAATATCCCTCCCGTTTGATA 60.240 42.308 0.00 0.00 0.00 2.15
1632 1710 7.228590 CCTAAAATATCCCTCCCGTTTGATAA 58.771 38.462 0.00 0.00 0.00 1.75
1633 1711 7.722285 CCTAAAATATCCCTCCCGTTTGATAAA 59.278 37.037 0.00 0.00 0.00 1.40
1634 1712 7.964666 AAAATATCCCTCCCGTTTGATAAAA 57.035 32.000 0.00 0.00 0.00 1.52
1635 1713 7.964666 AAATATCCCTCCCGTTTGATAAAAA 57.035 32.000 0.00 0.00 0.00 1.94
1669 1747 5.899631 AAGACCTTTTTAGTCCCTACACA 57.100 39.130 0.00 0.00 34.67 3.72
1670 1748 6.449830 AAGACCTTTTTAGTCCCTACACAT 57.550 37.500 0.00 0.00 34.67 3.21
1671 1749 7.563724 AAGACCTTTTTAGTCCCTACACATA 57.436 36.000 0.00 0.00 34.67 2.29
1672 1750 7.563724 AGACCTTTTTAGTCCCTACACATAA 57.436 36.000 0.00 0.00 34.67 1.90
1673 1751 7.981142 AGACCTTTTTAGTCCCTACACATAAA 58.019 34.615 0.00 0.00 34.67 1.40
1674 1752 8.442374 AGACCTTTTTAGTCCCTACACATAAAA 58.558 33.333 0.00 0.00 34.67 1.52
1675 1753 8.999905 ACCTTTTTAGTCCCTACACATAAAAA 57.000 30.769 0.00 0.00 35.31 1.94
1691 1769 1.187087 AAAAAGTCCCGGCAAACACA 58.813 45.000 0.00 0.00 0.00 3.72
1692 1770 1.408969 AAAAGTCCCGGCAAACACAT 58.591 45.000 0.00 0.00 0.00 3.21
1693 1771 0.958822 AAAGTCCCGGCAAACACATC 59.041 50.000 0.00 0.00 0.00 3.06
1694 1772 0.893727 AAGTCCCGGCAAACACATCC 60.894 55.000 0.00 0.00 0.00 3.51
1695 1773 2.034999 TCCCGGCAAACACATCCC 59.965 61.111 0.00 0.00 0.00 3.85
1696 1774 3.439540 CCCGGCAAACACATCCCG 61.440 66.667 0.00 0.00 40.39 5.14
1697 1775 2.671619 CCGGCAAACACATCCCGT 60.672 61.111 0.00 0.00 39.12 5.28
1698 1776 2.265182 CCGGCAAACACATCCCGTT 61.265 57.895 0.00 0.00 39.12 4.44
1699 1777 0.956410 CCGGCAAACACATCCCGTTA 60.956 55.000 0.00 0.00 39.12 3.18
1711 1789 5.766174 ACACATCCCGTTATTTTAGTGTTGT 59.234 36.000 0.00 0.00 35.66 3.32
1713 1791 4.752661 TCCCGTTATTTTAGTGTTGTGC 57.247 40.909 0.00 0.00 0.00 4.57
1716 1794 4.472286 CCGTTATTTTAGTGTTGTGCCTG 58.528 43.478 0.00 0.00 0.00 4.85
1732 1810 0.674895 CCTGCGGACTGCTTAGCTTT 60.675 55.000 7.96 0.00 46.63 3.51
1743 1821 4.821805 ACTGCTTAGCTTTGCTCTGTTTTA 59.178 37.500 5.60 0.00 40.44 1.52
1744 1822 5.474876 ACTGCTTAGCTTTGCTCTGTTTTAT 59.525 36.000 5.60 0.00 40.44 1.40
1745 1823 6.655003 ACTGCTTAGCTTTGCTCTGTTTTATA 59.345 34.615 5.60 0.00 40.44 0.98
1746 1824 7.076842 TGCTTAGCTTTGCTCTGTTTTATAG 57.923 36.000 5.60 0.00 40.44 1.31
1748 1826 4.972514 AGCTTTGCTCTGTTTTATAGCC 57.027 40.909 0.00 0.00 30.62 3.93
1777 1858 9.941664 CTCATGTACATAAATGAAGGATTTGAC 57.058 33.333 8.32 0.00 35.74 3.18
1838 1919 1.884579 ACTTGCTTCTGATTGGTGCTG 59.115 47.619 0.00 0.00 0.00 4.41
1853 1934 2.093869 GGTGCTGGTGATTAACTACCGA 60.094 50.000 5.71 0.00 39.87 4.69
1854 1935 3.431766 GGTGCTGGTGATTAACTACCGAT 60.432 47.826 5.71 0.00 39.87 4.18
1855 1936 4.189231 GTGCTGGTGATTAACTACCGATT 58.811 43.478 5.71 0.00 39.87 3.34
1889 1975 5.296283 CCTTGATTCATCTCCAGCAAACTAG 59.704 44.000 0.00 0.00 0.00 2.57
1915 2001 2.266055 CGCTTGTGGGGAGTCTCC 59.734 66.667 10.78 10.78 35.23 3.71
1928 2014 4.223556 GGAGTCTCCCCTTTCCTTTAAG 57.776 50.000 7.78 0.00 0.00 1.85
1929 2015 3.054287 GGAGTCTCCCCTTTCCTTTAAGG 60.054 52.174 7.78 4.29 43.58 2.69
1960 2046 3.283684 CGGGTGTGCTTGCCGAAA 61.284 61.111 0.00 0.00 0.00 3.46
1961 2047 2.625823 CGGGTGTGCTTGCCGAAAT 61.626 57.895 0.00 0.00 0.00 2.17
1962 2048 1.665442 GGGTGTGCTTGCCGAAATT 59.335 52.632 0.00 0.00 0.00 1.82
1963 2049 0.033366 GGGTGTGCTTGCCGAAATTT 59.967 50.000 0.00 0.00 0.00 1.82
1964 2050 1.540146 GGGTGTGCTTGCCGAAATTTT 60.540 47.619 0.00 0.00 0.00 1.82
1965 2051 1.792367 GGTGTGCTTGCCGAAATTTTC 59.208 47.619 0.00 0.00 0.00 2.29
1976 2062 2.819422 GAAATTTTCGGCCGGTCTAC 57.181 50.000 27.83 7.58 0.00 2.59
1977 2063 1.061566 GAAATTTTCGGCCGGTCTACG 59.938 52.381 27.83 3.92 43.80 3.51
1978 2064 1.363885 AATTTTCGGCCGGTCTACGC 61.364 55.000 27.83 0.00 42.52 4.42
1979 2065 3.938019 TTTTCGGCCGGTCTACGCC 62.938 63.158 27.83 0.00 42.52 5.68
1983 2069 3.603671 GGCCGGTCTACGCCCTAG 61.604 72.222 1.90 0.00 37.08 3.02
1984 2070 4.281947 GCCGGTCTACGCCCTAGC 62.282 72.222 1.90 0.00 42.52 3.42
1997 2083 2.347731 GCCCTAGCGTTGGATATAAGC 58.652 52.381 0.00 0.00 0.00 3.09
1998 2084 2.289444 GCCCTAGCGTTGGATATAAGCA 60.289 50.000 0.00 0.00 0.00 3.91
1999 2085 3.326747 CCCTAGCGTTGGATATAAGCAC 58.673 50.000 0.00 0.00 0.00 4.40
2000 2086 3.244078 CCCTAGCGTTGGATATAAGCACA 60.244 47.826 0.00 0.00 0.00 4.57
2001 2087 4.563580 CCCTAGCGTTGGATATAAGCACAT 60.564 45.833 0.00 0.00 0.00 3.21
2002 2088 5.337250 CCCTAGCGTTGGATATAAGCACATA 60.337 44.000 0.00 0.00 0.00 2.29
2003 2089 6.341316 CCTAGCGTTGGATATAAGCACATAT 58.659 40.000 0.00 0.00 0.00 1.78
2004 2090 7.417456 CCCTAGCGTTGGATATAAGCACATATA 60.417 40.741 0.00 0.00 0.00 0.86
2005 2091 7.979537 CCTAGCGTTGGATATAAGCACATATAA 59.020 37.037 0.00 0.00 0.00 0.98
2006 2092 7.596749 AGCGTTGGATATAAGCACATATAAC 57.403 36.000 0.00 0.00 0.00 1.89
2007 2093 6.594159 AGCGTTGGATATAAGCACATATAACC 59.406 38.462 0.00 0.00 33.52 2.85
2008 2094 6.370442 GCGTTGGATATAAGCACATATAACCA 59.630 38.462 8.27 8.27 38.31 3.67
2009 2095 7.065803 GCGTTGGATATAAGCACATATAACCAT 59.934 37.037 11.38 0.00 39.21 3.55
2010 2096 8.604035 CGTTGGATATAAGCACATATAACCATC 58.396 37.037 11.38 10.25 39.21 3.51
2011 2097 9.448438 GTTGGATATAAGCACATATAACCATCA 57.552 33.333 11.38 0.52 39.21 3.07
2012 2098 9.671279 TTGGATATAAGCACATATAACCATCAG 57.329 33.333 11.38 0.00 39.21 2.90
2013 2099 9.045745 TGGATATAAGCACATATAACCATCAGA 57.954 33.333 8.27 0.00 36.39 3.27
2017 2103 5.830799 AGCACATATAACCATCAGATCCA 57.169 39.130 0.00 0.00 0.00 3.41
2018 2104 5.802465 AGCACATATAACCATCAGATCCAG 58.198 41.667 0.00 0.00 0.00 3.86
2019 2105 5.545335 AGCACATATAACCATCAGATCCAGA 59.455 40.000 0.00 0.00 0.00 3.86
2020 2106 5.873712 GCACATATAACCATCAGATCCAGAG 59.126 44.000 0.00 0.00 0.00 3.35
2021 2107 6.519721 GCACATATAACCATCAGATCCAGAGT 60.520 42.308 0.00 0.00 0.00 3.24
2022 2108 7.310052 GCACATATAACCATCAGATCCAGAGTA 60.310 40.741 0.00 0.00 0.00 2.59
2023 2109 8.249638 CACATATAACCATCAGATCCAGAGTAG 58.750 40.741 0.00 0.00 0.00 2.57
2024 2110 8.173412 ACATATAACCATCAGATCCAGAGTAGA 58.827 37.037 0.00 0.00 0.00 2.59
2025 2111 9.029368 CATATAACCATCAGATCCAGAGTAGAA 57.971 37.037 0.00 0.00 0.00 2.10
2026 2112 7.921041 ATAACCATCAGATCCAGAGTAGAAA 57.079 36.000 0.00 0.00 0.00 2.52
2027 2113 6.627087 AACCATCAGATCCAGAGTAGAAAA 57.373 37.500 0.00 0.00 0.00 2.29
2028 2114 6.627087 ACCATCAGATCCAGAGTAGAAAAA 57.373 37.500 0.00 0.00 0.00 1.94
2050 2136 2.285827 AAATCTCCTTCTCGCTCACG 57.714 50.000 0.00 0.00 42.01 4.35
2051 2137 1.178276 AATCTCCTTCTCGCTCACGT 58.822 50.000 0.00 0.00 41.18 4.49
2052 2138 2.039818 ATCTCCTTCTCGCTCACGTA 57.960 50.000 0.00 0.00 41.18 3.57
2053 2139 1.085091 TCTCCTTCTCGCTCACGTAC 58.915 55.000 0.00 0.00 41.18 3.67
2054 2140 0.803117 CTCCTTCTCGCTCACGTACA 59.197 55.000 0.00 0.00 41.18 2.90
2055 2141 1.199327 CTCCTTCTCGCTCACGTACAA 59.801 52.381 0.00 0.00 41.18 2.41
2056 2142 1.068748 TCCTTCTCGCTCACGTACAAC 60.069 52.381 0.00 0.00 41.18 3.32
2057 2143 1.068472 CCTTCTCGCTCACGTACAACT 60.068 52.381 0.00 0.00 41.18 3.16
2058 2144 2.243407 CTTCTCGCTCACGTACAACTC 58.757 52.381 0.00 0.00 41.18 3.01
2059 2145 0.520404 TCTCGCTCACGTACAACTCC 59.480 55.000 0.00 0.00 41.18 3.85
2060 2146 0.240145 CTCGCTCACGTACAACTCCA 59.760 55.000 0.00 0.00 41.18 3.86
2061 2147 0.885879 TCGCTCACGTACAACTCCAT 59.114 50.000 0.00 0.00 41.18 3.41
2062 2148 0.992072 CGCTCACGTACAACTCCATG 59.008 55.000 0.00 0.00 33.53 3.66
2063 2149 1.402325 CGCTCACGTACAACTCCATGA 60.402 52.381 0.00 0.00 33.53 3.07
2064 2150 1.993370 GCTCACGTACAACTCCATGAC 59.007 52.381 0.00 0.00 0.00 3.06
2065 2151 2.609491 GCTCACGTACAACTCCATGACA 60.609 50.000 0.00 0.00 0.00 3.58
2066 2152 3.849911 CTCACGTACAACTCCATGACAT 58.150 45.455 0.00 0.00 0.00 3.06
2067 2153 3.845178 TCACGTACAACTCCATGACATC 58.155 45.455 0.00 0.00 0.00 3.06
2068 2154 3.509967 TCACGTACAACTCCATGACATCT 59.490 43.478 0.00 0.00 0.00 2.90
2069 2155 3.859961 CACGTACAACTCCATGACATCTC 59.140 47.826 0.00 0.00 0.00 2.75
2070 2156 3.509967 ACGTACAACTCCATGACATCTCA 59.490 43.478 0.00 0.00 0.00 3.27
2071 2157 3.859961 CGTACAACTCCATGACATCTCAC 59.140 47.826 0.00 0.00 0.00 3.51
2072 2158 4.618227 CGTACAACTCCATGACATCTCACA 60.618 45.833 0.00 0.00 0.00 3.58
2073 2159 3.935315 ACAACTCCATGACATCTCACAG 58.065 45.455 0.00 0.00 0.00 3.66
2074 2160 2.676839 CAACTCCATGACATCTCACAGC 59.323 50.000 0.00 0.00 0.00 4.40
2075 2161 1.209019 ACTCCATGACATCTCACAGCC 59.791 52.381 0.00 0.00 0.00 4.85
2076 2162 1.208776 CTCCATGACATCTCACAGCCA 59.791 52.381 0.00 0.00 0.00 4.75
2077 2163 1.065926 TCCATGACATCTCACAGCCAC 60.066 52.381 0.00 0.00 0.00 5.01
2078 2164 1.065636 CCATGACATCTCACAGCCACT 60.066 52.381 0.00 0.00 0.00 4.00
2079 2165 2.617276 CCATGACATCTCACAGCCACTT 60.617 50.000 0.00 0.00 0.00 3.16
2080 2166 2.174363 TGACATCTCACAGCCACTTG 57.826 50.000 0.00 0.00 0.00 3.16
2081 2167 0.801251 GACATCTCACAGCCACTTGC 59.199 55.000 0.00 0.00 41.71 4.01
2090 2176 3.495543 GCCACTTGCTAGCAGCTC 58.504 61.111 18.45 3.35 42.97 4.09
2091 2177 2.459442 GCCACTTGCTAGCAGCTCG 61.459 63.158 18.45 10.26 42.97 5.03
2092 2178 2.459442 CCACTTGCTAGCAGCTCGC 61.459 63.158 18.45 12.01 42.97 5.03
2093 2179 2.125350 ACTTGCTAGCAGCTCGCC 60.125 61.111 18.45 0.00 42.97 5.54
2094 2180 3.260483 CTTGCTAGCAGCTCGCCG 61.260 66.667 18.45 3.94 42.97 6.46
2095 2181 4.819761 TTGCTAGCAGCTCGCCGG 62.820 66.667 18.45 0.00 42.97 6.13
2097 2183 4.940593 GCTAGCAGCTCGCCGGAG 62.941 72.222 10.63 0.00 44.04 4.63
2147 2233 3.663176 CTGGTTGCAGCACCGGTG 61.663 66.667 30.66 30.66 40.09 4.94
2160 2246 2.357517 CGGTGCTCACTGGTCCAC 60.358 66.667 0.97 0.00 34.12 4.02
2161 2247 2.032681 GGTGCTCACTGGTCCACC 59.967 66.667 0.00 0.00 40.71 4.61
2162 2248 2.032681 GTGCTCACTGGTCCACCC 59.967 66.667 0.00 0.00 34.29 4.61
2163 2249 3.249189 TGCTCACTGGTCCACCCC 61.249 66.667 0.00 0.00 34.29 4.95
2164 2250 4.394712 GCTCACTGGTCCACCCCG 62.395 72.222 0.00 0.00 34.29 5.73
2165 2251 3.706373 CTCACTGGTCCACCCCGG 61.706 72.222 0.00 0.00 36.89 5.73
2190 2276 4.198890 CGCTAGCAGCTCGCCTGA 62.199 66.667 16.45 0.00 44.64 3.86
2191 2277 2.584694 GCTAGCAGCTCGCCTGAC 60.585 66.667 10.63 0.00 44.64 3.51
2192 2278 2.105930 CTAGCAGCTCGCCTGACC 59.894 66.667 0.00 0.00 44.64 4.02
2193 2279 3.438017 CTAGCAGCTCGCCTGACCC 62.438 68.421 0.00 0.00 44.64 4.46
2199 2285 4.379243 CTCGCCTGACCCGCTTGT 62.379 66.667 0.00 0.00 0.00 3.16
2200 2286 4.373116 TCGCCTGACCCGCTTGTC 62.373 66.667 0.00 0.00 35.77 3.18
2212 2298 3.036084 CTTGTCGGCGTGCTCGTT 61.036 61.111 6.85 0.00 39.49 3.85
2213 2299 3.281751 CTTGTCGGCGTGCTCGTTG 62.282 63.158 6.85 2.93 39.49 4.10
2236 2322 4.460873 GCTTGCCGGTTGTAGCGC 62.461 66.667 1.90 0.00 37.85 5.92
2237 2323 3.799755 CTTGCCGGTTGTAGCGCC 61.800 66.667 2.29 0.00 37.85 6.53
2242 2328 3.484547 CGGTTGTAGCGCCGGTTC 61.485 66.667 2.29 0.00 43.85 3.62
2243 2329 2.047560 GGTTGTAGCGCCGGTTCT 60.048 61.111 2.29 2.72 0.00 3.01
2244 2330 2.098831 GGTTGTAGCGCCGGTTCTC 61.099 63.158 2.29 0.00 0.00 2.87
2245 2331 1.373748 GTTGTAGCGCCGGTTCTCA 60.374 57.895 2.29 0.00 0.00 3.27
2246 2332 1.373748 TTGTAGCGCCGGTTCTCAC 60.374 57.895 2.29 0.00 0.00 3.51
2247 2333 1.812686 TTGTAGCGCCGGTTCTCACT 61.813 55.000 2.29 0.00 0.00 3.41
2248 2334 1.805945 GTAGCGCCGGTTCTCACTG 60.806 63.158 2.29 0.00 0.00 3.66
2253 2339 4.996976 CCGGTTCTCACTGGTCTG 57.003 61.111 0.00 0.00 43.90 3.51
2254 2340 1.374758 CCGGTTCTCACTGGTCTGC 60.375 63.158 0.00 0.00 43.90 4.26
2255 2341 1.374758 CGGTTCTCACTGGTCTGCC 60.375 63.158 0.00 0.00 0.00 4.85
2256 2342 1.003233 GGTTCTCACTGGTCTGCCC 60.003 63.158 0.00 0.00 0.00 5.36
2257 2343 1.484444 GGTTCTCACTGGTCTGCCCT 61.484 60.000 0.00 0.00 0.00 5.19
2258 2344 0.321122 GTTCTCACTGGTCTGCCCTG 60.321 60.000 0.00 0.00 38.12 4.45
2259 2345 0.471780 TTCTCACTGGTCTGCCCTGA 60.472 55.000 0.00 0.00 36.11 3.86
2260 2346 0.902048 TCTCACTGGTCTGCCCTGAG 60.902 60.000 0.00 0.00 38.75 3.35
2261 2347 1.897225 CTCACTGGTCTGCCCTGAGG 61.897 65.000 0.00 0.00 36.03 3.86
2271 2357 4.860881 CCCTGAGGCCTCCCGCTA 62.861 72.222 29.95 10.03 37.74 4.26
2272 2358 3.230245 CCTGAGGCCTCCCGCTAG 61.230 72.222 29.95 19.08 37.74 3.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.920869 CGTAGGCACGCGCATAAG 59.079 61.111 5.73 0.00 42.05 1.73
26 27 0.459934 ACCGAAAACAACGTGTCCGA 60.460 50.000 0.00 0.00 37.88 4.55
27 28 0.042794 GACCGAAAACAACGTGTCCG 60.043 55.000 0.00 0.00 40.83 4.79
28 29 0.042794 CGACCGAAAACAACGTGTCC 60.043 55.000 0.00 0.00 32.12 4.02
32 33 2.873604 CGCCGACCGAAAACAACGT 61.874 57.895 0.00 0.00 40.02 3.99
33 34 2.127906 CGCCGACCGAAAACAACG 60.128 61.111 0.00 0.00 40.02 4.10
76 77 7.573968 ATTATTTTGTTCTATCCTGTCTGGC 57.426 36.000 0.00 0.00 35.26 4.85
97 98 0.250553 CGCCGCCTTTCCCCATATTA 60.251 55.000 0.00 0.00 0.00 0.98
100 101 4.183858 CCGCCGCCTTTCCCCATA 62.184 66.667 0.00 0.00 0.00 2.74
190 191 0.987294 CTTTGAGGGAGGAGGCTTCA 59.013 55.000 0.00 0.00 0.00 3.02
249 251 2.281276 GACGGTCCGTTTGGCCTT 60.281 61.111 19.95 0.00 41.37 4.35
250 252 3.552384 TGACGGTCCGTTTGGCCT 61.552 61.111 19.95 0.00 41.37 5.19
251 253 3.351416 GTGACGGTCCGTTTGGCC 61.351 66.667 19.95 5.69 41.37 5.36
252 254 2.589442 TGTGACGGTCCGTTTGGC 60.589 61.111 19.95 6.10 41.37 4.52
253 255 2.604174 GCTGTGACGGTCCGTTTGG 61.604 63.158 19.95 10.36 41.37 3.28
254 256 1.157870 AAGCTGTGACGGTCCGTTTG 61.158 55.000 19.95 10.06 41.37 2.93
255 257 1.145377 AAGCTGTGACGGTCCGTTT 59.855 52.632 19.95 4.51 41.37 3.60
256 258 1.594293 CAAGCTGTGACGGTCCGTT 60.594 57.895 19.95 1.74 41.37 4.44
258 260 1.557443 GAACAAGCTGTGACGGTCCG 61.557 60.000 10.48 10.48 0.00 4.79
260 262 1.228657 GGGAACAAGCTGTGACGGTC 61.229 60.000 0.00 0.00 0.00 4.79
261 263 1.227853 GGGAACAAGCTGTGACGGT 60.228 57.895 0.00 0.00 0.00 4.83
269 272 1.005394 CGGTACACGGGAACAAGCT 60.005 57.895 0.00 0.00 39.42 3.74
271 274 1.796459 CTTTCGGTACACGGGAACAAG 59.204 52.381 0.00 0.00 44.45 3.16
281 284 2.922740 AAGGAACTGCTTTCGGTACA 57.077 45.000 0.00 0.00 40.86 2.90
313 316 3.066760 CGAACCAGAAGGAACTGCTTTTT 59.933 43.478 0.00 0.00 46.70 1.94
314 317 2.618709 CGAACCAGAAGGAACTGCTTTT 59.381 45.455 0.00 0.00 46.70 2.27
315 318 2.222027 CGAACCAGAAGGAACTGCTTT 58.778 47.619 0.00 0.00 46.70 3.51
316 319 1.884235 CGAACCAGAAGGAACTGCTT 58.116 50.000 0.00 0.00 46.70 3.91
318 321 1.578206 GGCGAACCAGAAGGAACTGC 61.578 60.000 0.00 0.00 38.69 4.40
319 322 0.035458 AGGCGAACCAGAAGGAACTG 59.965 55.000 0.00 0.00 37.23 3.16
320 323 0.321996 GAGGCGAACCAGAAGGAACT 59.678 55.000 0.00 0.00 38.88 3.01
321 324 0.673956 GGAGGCGAACCAGAAGGAAC 60.674 60.000 0.00 0.00 39.06 3.62
322 325 1.677552 GGAGGCGAACCAGAAGGAA 59.322 57.895 0.00 0.00 39.06 3.36
323 326 2.291043 GGGAGGCGAACCAGAAGGA 61.291 63.158 0.00 0.00 39.06 3.36
324 327 2.269241 GGGAGGCGAACCAGAAGG 59.731 66.667 0.00 0.00 39.06 3.46
325 328 2.125512 CGGGAGGCGAACCAGAAG 60.126 66.667 0.00 0.00 39.06 2.85
326 329 2.602267 TCGGGAGGCGAACCAGAA 60.602 61.111 0.00 0.00 39.06 3.02
327 330 3.379445 GTCGGGAGGCGAACCAGA 61.379 66.667 0.00 0.00 39.06 3.86
328 331 4.452733 GGTCGGGAGGCGAACCAG 62.453 72.222 0.00 0.00 39.06 4.00
348 351 1.601903 CGCCTGTTGTGCTGACTTAAA 59.398 47.619 0.00 0.00 0.00 1.52
351 354 3.736483 CGCCTGTTGTGCTGACTT 58.264 55.556 0.00 0.00 0.00 3.01
502 506 3.435186 GCCTGCGGTTTGAGCCTC 61.435 66.667 0.00 0.00 0.00 4.70
916 964 1.669999 GGATGGATGCCTTGTGTGCC 61.670 60.000 0.00 0.00 0.00 5.01
925 973 1.595382 CGAGGAACGGATGGATGCC 60.595 63.158 0.00 0.00 38.46 4.40
938 986 1.183549 GCTGACTTAGGAACCGAGGA 58.816 55.000 0.00 0.00 0.00 3.71
960 1008 0.437295 CGACCGTCGATGAACAAACC 59.563 55.000 16.03 0.00 43.74 3.27
1276 1338 5.352284 ACATATCCAAACGTCTCAGATGAC 58.648 41.667 0.00 0.00 0.00 3.06
1278 1340 6.367149 CCATACATATCCAAACGTCTCAGATG 59.633 42.308 0.00 0.00 0.00 2.90
1282 1344 5.862678 TCCATACATATCCAAACGTCTCA 57.137 39.130 0.00 0.00 0.00 3.27
1298 1373 2.035449 TCGGTCCATGACGATTCCATAC 59.965 50.000 0.00 0.00 33.69 2.39
1307 1382 1.860950 GAACATCATCGGTCCATGACG 59.139 52.381 0.00 0.00 35.57 4.35
1341 1419 9.286170 AGTTGGGATTAGAAAAAGTTCTAGAAC 57.714 33.333 25.24 25.24 45.08 3.01
1352 1430 9.862149 AGAGACTTTTTAGTTGGGATTAGAAAA 57.138 29.630 0.00 0.00 0.00 2.29
1355 1433 9.322769 ACTAGAGACTTTTTAGTTGGGATTAGA 57.677 33.333 0.00 0.00 0.00 2.10
1356 1434 9.372369 CACTAGAGACTTTTTAGTTGGGATTAG 57.628 37.037 0.00 0.00 0.00 1.73
1357 1435 7.822822 GCACTAGAGACTTTTTAGTTGGGATTA 59.177 37.037 0.00 0.00 0.00 1.75
1358 1436 6.655425 GCACTAGAGACTTTTTAGTTGGGATT 59.345 38.462 0.00 0.00 0.00 3.01
1359 1437 6.013293 AGCACTAGAGACTTTTTAGTTGGGAT 60.013 38.462 0.00 0.00 0.00 3.85
1360 1438 5.307196 AGCACTAGAGACTTTTTAGTTGGGA 59.693 40.000 0.00 0.00 0.00 4.37
1361 1439 5.552178 AGCACTAGAGACTTTTTAGTTGGG 58.448 41.667 0.00 0.00 0.00 4.12
1362 1440 8.603242 TTAAGCACTAGAGACTTTTTAGTTGG 57.397 34.615 0.00 0.00 0.00 3.77
1369 1447 8.622157 GGAACTTTTTAAGCACTAGAGACTTTT 58.378 33.333 0.00 0.00 0.00 2.27
1370 1448 7.993758 AGGAACTTTTTAAGCACTAGAGACTTT 59.006 33.333 0.00 0.00 27.25 2.66
1371 1449 7.510407 AGGAACTTTTTAAGCACTAGAGACTT 58.490 34.615 0.00 0.00 27.25 3.01
1372 1450 7.068686 AGGAACTTTTTAAGCACTAGAGACT 57.931 36.000 0.00 0.00 27.25 3.24
1391 1469 7.745620 TCTCTGAAAACAAATAGGAAGGAAC 57.254 36.000 0.00 0.00 0.00 3.62
1392 1470 8.940397 AATCTCTGAAAACAAATAGGAAGGAA 57.060 30.769 0.00 0.00 0.00 3.36
1407 1485 9.503399 GGACTAAGGACTTTTTAATCTCTGAAA 57.497 33.333 0.00 0.00 0.00 2.69
1408 1486 8.101419 GGGACTAAGGACTTTTTAATCTCTGAA 58.899 37.037 0.00 0.00 0.00 3.02
1409 1487 7.458170 AGGGACTAAGGACTTTTTAATCTCTGA 59.542 37.037 0.00 0.00 36.02 3.27
1410 1488 7.625469 AGGGACTAAGGACTTTTTAATCTCTG 58.375 38.462 0.00 0.00 36.02 3.35
1411 1489 7.816300 AGGGACTAAGGACTTTTTAATCTCT 57.184 36.000 0.00 0.00 36.02 3.10
1412 1490 8.865420 AAAGGGACTAAGGACTTTTTAATCTC 57.135 34.615 0.00 0.00 38.49 2.75
1413 1491 8.670490 AGAAAGGGACTAAGGACTTTTTAATCT 58.330 33.333 0.00 0.00 38.49 2.40
1414 1492 8.865420 AGAAAGGGACTAAGGACTTTTTAATC 57.135 34.615 0.00 0.00 38.49 1.75
1415 1493 9.961264 CTAGAAAGGGACTAAGGACTTTTTAAT 57.039 33.333 0.00 0.00 38.49 1.40
1416 1494 9.162733 TCTAGAAAGGGACTAAGGACTTTTTAA 57.837 33.333 0.00 0.00 38.49 1.52
1417 1495 8.731591 TCTAGAAAGGGACTAAGGACTTTTTA 57.268 34.615 0.00 0.00 38.49 1.52
1418 1496 7.513091 TCTCTAGAAAGGGACTAAGGACTTTTT 59.487 37.037 0.00 0.00 38.49 1.94
1419 1497 7.017531 TCTCTAGAAAGGGACTAAGGACTTTT 58.982 38.462 0.00 0.00 38.49 2.27
1420 1498 6.563163 TCTCTAGAAAGGGACTAAGGACTTT 58.437 40.000 0.00 0.00 38.49 2.66
1421 1499 6.155247 TCTCTAGAAAGGGACTAAGGACTT 57.845 41.667 0.00 0.00 38.49 3.01
1422 1500 5.799978 TCTCTAGAAAGGGACTAAGGACT 57.200 43.478 0.00 0.00 38.49 3.85
1423 1501 8.715190 ATAATCTCTAGAAAGGGACTAAGGAC 57.285 38.462 0.00 0.00 38.49 3.85
1439 1517 9.851686 AGCAACATGGTCATTTAATAATCTCTA 57.148 29.630 0.00 0.00 0.00 2.43
1440 1518 8.757982 AGCAACATGGTCATTTAATAATCTCT 57.242 30.769 0.00 0.00 0.00 3.10
1441 1519 9.455847 GAAGCAACATGGTCATTTAATAATCTC 57.544 33.333 0.00 0.00 0.00 2.75
1442 1520 9.193806 AGAAGCAACATGGTCATTTAATAATCT 57.806 29.630 0.00 0.00 0.00 2.40
1445 1523 9.461312 ACTAGAAGCAACATGGTCATTTAATAA 57.539 29.630 0.00 0.00 0.00 1.40
1447 1525 7.944729 ACTAGAAGCAACATGGTCATTTAAT 57.055 32.000 0.00 0.00 0.00 1.40
1478 1556 8.628280 CCCATGGTTTGTTTGATTGTTATTTTT 58.372 29.630 11.73 0.00 0.00 1.94
1479 1557 7.995488 TCCCATGGTTTGTTTGATTGTTATTTT 59.005 29.630 11.73 0.00 0.00 1.82
1480 1558 7.512992 TCCCATGGTTTGTTTGATTGTTATTT 58.487 30.769 11.73 0.00 0.00 1.40
1481 1559 7.072263 TCCCATGGTTTGTTTGATTGTTATT 57.928 32.000 11.73 0.00 0.00 1.40
1482 1560 6.678568 TCCCATGGTTTGTTTGATTGTTAT 57.321 33.333 11.73 0.00 0.00 1.89
1483 1561 6.462500 CATCCCATGGTTTGTTTGATTGTTA 58.538 36.000 11.73 0.00 0.00 2.41
1484 1562 5.307204 CATCCCATGGTTTGTTTGATTGTT 58.693 37.500 11.73 0.00 0.00 2.83
1485 1563 4.262981 CCATCCCATGGTTTGTTTGATTGT 60.263 41.667 11.73 0.00 45.54 2.71
1486 1564 4.255301 CCATCCCATGGTTTGTTTGATTG 58.745 43.478 11.73 0.00 45.54 2.67
1487 1565 4.556592 CCATCCCATGGTTTGTTTGATT 57.443 40.909 11.73 0.00 45.54 2.57
1507 1585 0.314935 CATGTATTCAATGGCCCGCC 59.685 55.000 0.00 0.00 0.00 6.13
1508 1586 0.314935 CCATGTATTCAATGGCCCGC 59.685 55.000 0.00 0.00 0.00 6.13
1509 1587 1.881973 CTCCATGTATTCAATGGCCCG 59.118 52.381 0.00 0.00 35.51 6.13
1510 1588 3.228188 TCTCCATGTATTCAATGGCCC 57.772 47.619 0.00 0.00 35.51 5.80
1511 1589 3.057033 GCATCTCCATGTATTCAATGGCC 60.057 47.826 0.00 0.00 35.51 5.36
1512 1590 3.570975 TGCATCTCCATGTATTCAATGGC 59.429 43.478 0.00 0.00 35.51 4.40
1513 1591 5.977489 ATGCATCTCCATGTATTCAATGG 57.023 39.130 0.00 0.00 31.72 3.16
1514 1592 6.745116 ACAATGCATCTCCATGTATTCAATG 58.255 36.000 0.00 0.00 41.82 2.82
1515 1593 6.971726 ACAATGCATCTCCATGTATTCAAT 57.028 33.333 0.00 0.00 41.82 2.57
1516 1594 6.377712 TCAACAATGCATCTCCATGTATTCAA 59.622 34.615 0.00 0.00 41.82 2.69
1517 1595 5.887035 TCAACAATGCATCTCCATGTATTCA 59.113 36.000 0.00 0.00 41.82 2.57
1518 1596 6.381481 TCAACAATGCATCTCCATGTATTC 57.619 37.500 0.00 0.00 41.82 1.75
1519 1597 6.778834 TTCAACAATGCATCTCCATGTATT 57.221 33.333 0.00 0.00 43.82 1.89
1520 1598 6.778834 TTTCAACAATGCATCTCCATGTAT 57.221 33.333 0.00 0.00 36.95 2.29
1521 1599 6.587206 TTTTCAACAATGCATCTCCATGTA 57.413 33.333 0.00 0.00 31.86 2.29
1522 1600 5.471556 TTTTCAACAATGCATCTCCATGT 57.528 34.783 0.00 0.00 31.86 3.21
1523 1601 5.929992 ACTTTTTCAACAATGCATCTCCATG 59.070 36.000 0.00 0.00 0.00 3.66
1524 1602 6.105397 ACTTTTTCAACAATGCATCTCCAT 57.895 33.333 0.00 0.00 0.00 3.41
1525 1603 5.509501 GGACTTTTTCAACAATGCATCTCCA 60.510 40.000 0.00 0.00 0.00 3.86
1526 1604 4.925646 GGACTTTTTCAACAATGCATCTCC 59.074 41.667 0.00 0.00 0.00 3.71
1527 1605 4.925646 GGGACTTTTTCAACAATGCATCTC 59.074 41.667 0.00 0.00 0.00 2.75
1528 1606 4.262592 GGGGACTTTTTCAACAATGCATCT 60.263 41.667 0.00 0.00 0.00 2.90
1529 1607 3.996363 GGGGACTTTTTCAACAATGCATC 59.004 43.478 0.00 0.00 0.00 3.91
1530 1608 3.390639 TGGGGACTTTTTCAACAATGCAT 59.609 39.130 0.00 0.00 0.00 3.96
1531 1609 2.768527 TGGGGACTTTTTCAACAATGCA 59.231 40.909 0.00 0.00 0.00 3.96
1532 1610 3.467374 TGGGGACTTTTTCAACAATGC 57.533 42.857 0.00 0.00 0.00 3.56
1533 1611 6.597280 TCTTTTTGGGGACTTTTTCAACAATG 59.403 34.615 0.00 0.00 0.00 2.82
1534 1612 6.597672 GTCTTTTTGGGGACTTTTTCAACAAT 59.402 34.615 0.00 0.00 0.00 2.71
1535 1613 5.935206 GTCTTTTTGGGGACTTTTTCAACAA 59.065 36.000 0.00 0.00 0.00 2.83
1536 1614 5.247337 AGTCTTTTTGGGGACTTTTTCAACA 59.753 36.000 0.00 0.00 39.44 3.33
1537 1615 5.730550 AGTCTTTTTGGGGACTTTTTCAAC 58.269 37.500 0.00 0.00 39.44 3.18
1538 1616 5.719563 AGAGTCTTTTTGGGGACTTTTTCAA 59.280 36.000 0.00 0.00 42.06 2.69
1539 1617 5.269189 AGAGTCTTTTTGGGGACTTTTTCA 58.731 37.500 0.00 0.00 42.06 2.69
1540 1618 5.854010 AGAGTCTTTTTGGGGACTTTTTC 57.146 39.130 0.00 0.00 42.06 2.29
1541 1619 5.958380 AGAAGAGTCTTTTTGGGGACTTTTT 59.042 36.000 6.88 0.00 42.06 1.94
1542 1620 5.519808 AGAAGAGTCTTTTTGGGGACTTTT 58.480 37.500 6.88 0.00 42.06 2.27
1543 1621 5.130705 AGAAGAGTCTTTTTGGGGACTTT 57.869 39.130 6.88 0.00 42.06 2.66
1544 1622 4.797912 AGAAGAGTCTTTTTGGGGACTT 57.202 40.909 6.88 0.00 42.06 3.01
1545 1623 4.797912 AAGAAGAGTCTTTTTGGGGACT 57.202 40.909 6.88 0.00 41.55 3.85
1546 1624 6.296803 TCTTAAGAAGAGTCTTTTTGGGGAC 58.703 40.000 16.78 0.00 41.55 4.46
1547 1625 6.509523 TCTTAAGAAGAGTCTTTTTGGGGA 57.490 37.500 16.78 9.89 41.55 4.81
1548 1626 7.767250 ATTCTTAAGAAGAGTCTTTTTGGGG 57.233 36.000 21.75 8.14 41.55 4.96
1563 1641 9.892130 GGGACTAAATGAAGAAGATTCTTAAGA 57.108 33.333 7.78 0.00 46.84 2.10
1564 1642 9.672673 TGGGACTAAATGAAGAAGATTCTTAAG 57.327 33.333 7.78 0.00 46.84 1.85
1566 1644 9.672673 CTTGGGACTAAATGAAGAAGATTCTTA 57.327 33.333 7.78 0.00 46.84 2.10
1568 1646 7.609532 CACTTGGGACTAAATGAAGAAGATTCT 59.390 37.037 0.00 0.00 39.74 2.40
1569 1647 7.391833 ACACTTGGGACTAAATGAAGAAGATTC 59.608 37.037 0.00 0.00 0.00 2.52
1570 1648 7.234355 ACACTTGGGACTAAATGAAGAAGATT 58.766 34.615 0.00 0.00 0.00 2.40
1571 1649 6.784031 ACACTTGGGACTAAATGAAGAAGAT 58.216 36.000 0.00 0.00 0.00 2.40
1572 1650 6.043243 AGACACTTGGGACTAAATGAAGAAGA 59.957 38.462 0.00 0.00 0.00 2.87
1573 1651 6.234177 AGACACTTGGGACTAAATGAAGAAG 58.766 40.000 0.00 0.00 0.00 2.85
1574 1652 6.187727 AGACACTTGGGACTAAATGAAGAA 57.812 37.500 0.00 0.00 0.00 2.52
1575 1653 5.825593 AGACACTTGGGACTAAATGAAGA 57.174 39.130 0.00 0.00 0.00 2.87
1576 1654 6.702329 ACTAGACACTTGGGACTAAATGAAG 58.298 40.000 0.00 0.00 0.00 3.02
1577 1655 6.681729 ACTAGACACTTGGGACTAAATGAA 57.318 37.500 0.00 0.00 0.00 2.57
1578 1656 6.269077 TGAACTAGACACTTGGGACTAAATGA 59.731 38.462 0.00 0.00 0.00 2.57
1579 1657 6.464222 TGAACTAGACACTTGGGACTAAATG 58.536 40.000 0.00 0.00 0.00 2.32
1580 1658 6.270231 ACTGAACTAGACACTTGGGACTAAAT 59.730 38.462 0.00 0.00 0.00 1.40
1581 1659 5.601313 ACTGAACTAGACACTTGGGACTAAA 59.399 40.000 0.00 0.00 0.00 1.85
1582 1660 5.145564 ACTGAACTAGACACTTGGGACTAA 58.854 41.667 0.00 0.00 0.00 2.24
1583 1661 4.737578 ACTGAACTAGACACTTGGGACTA 58.262 43.478 0.00 0.00 0.00 2.59
1584 1662 3.574826 GACTGAACTAGACACTTGGGACT 59.425 47.826 0.00 0.00 0.00 3.85
1585 1663 3.306156 GGACTGAACTAGACACTTGGGAC 60.306 52.174 0.00 0.00 0.00 4.46
1586 1664 2.897969 GGACTGAACTAGACACTTGGGA 59.102 50.000 0.00 0.00 0.00 4.37
1587 1665 2.028020 GGGACTGAACTAGACACTTGGG 60.028 54.545 0.00 0.00 0.00 4.12
1588 1666 2.900546 AGGGACTGAACTAGACACTTGG 59.099 50.000 0.00 0.00 37.18 3.61
1589 1667 5.723672 TTAGGGACTGAACTAGACACTTG 57.276 43.478 0.00 0.00 41.52 3.16
1590 1668 6.742559 TTTTAGGGACTGAACTAGACACTT 57.257 37.500 0.00 0.00 41.52 3.16
1591 1669 6.936968 ATTTTAGGGACTGAACTAGACACT 57.063 37.500 0.00 0.00 41.52 3.55
1592 1670 7.927092 GGATATTTTAGGGACTGAACTAGACAC 59.073 40.741 0.00 0.00 41.52 3.67
1593 1671 7.070821 GGGATATTTTAGGGACTGAACTAGACA 59.929 40.741 0.00 0.00 41.52 3.41
1594 1672 7.290481 AGGGATATTTTAGGGACTGAACTAGAC 59.710 40.741 0.00 0.00 41.52 2.59
1595 1673 7.371043 AGGGATATTTTAGGGACTGAACTAGA 58.629 38.462 0.00 0.00 41.52 2.43
1596 1674 7.256368 GGAGGGATATTTTAGGGACTGAACTAG 60.256 44.444 0.00 0.00 41.52 2.57
1597 1675 6.557633 GGAGGGATATTTTAGGGACTGAACTA 59.442 42.308 0.00 0.00 41.52 2.24
1598 1676 5.369993 GGAGGGATATTTTAGGGACTGAACT 59.630 44.000 0.00 0.00 41.52 3.01
1599 1677 5.456330 GGGAGGGATATTTTAGGGACTGAAC 60.456 48.000 0.00 0.00 41.52 3.18
1600 1678 4.663592 GGGAGGGATATTTTAGGGACTGAA 59.336 45.833 0.00 0.00 41.52 3.02
1601 1679 4.240323 GGGAGGGATATTTTAGGGACTGA 58.760 47.826 0.00 0.00 41.52 3.41
1602 1680 3.008049 CGGGAGGGATATTTTAGGGACTG 59.992 52.174 0.00 0.00 41.52 3.51
1603 1681 3.248888 CGGGAGGGATATTTTAGGGACT 58.751 50.000 0.00 0.00 46.37 3.85
1604 1682 2.977580 ACGGGAGGGATATTTTAGGGAC 59.022 50.000 0.00 0.00 0.00 4.46
1605 1683 3.355857 ACGGGAGGGATATTTTAGGGA 57.644 47.619 0.00 0.00 0.00 4.20
1606 1684 4.141344 TCAAACGGGAGGGATATTTTAGGG 60.141 45.833 0.00 0.00 0.00 3.53
1607 1685 5.043737 TCAAACGGGAGGGATATTTTAGG 57.956 43.478 0.00 0.00 0.00 2.69
1608 1686 8.685838 TTTATCAAACGGGAGGGATATTTTAG 57.314 34.615 0.00 0.00 0.00 1.85
1609 1687 9.476928 TTTTTATCAAACGGGAGGGATATTTTA 57.523 29.630 0.00 0.00 0.00 1.52
1610 1688 7.964666 TTTTATCAAACGGGAGGGATATTTT 57.035 32.000 0.00 0.00 0.00 1.82
1611 1689 7.964666 TTTTTATCAAACGGGAGGGATATTT 57.035 32.000 0.00 0.00 0.00 1.40
1645 1723 6.665695 TGTGTAGGGACTAAAAAGGTCTTTT 58.334 36.000 3.12 3.12 45.48 2.27
1646 1724 6.256643 TGTGTAGGGACTAAAAAGGTCTTT 57.743 37.500 0.00 0.00 45.48 2.52
1647 1725 5.899631 TGTGTAGGGACTAAAAAGGTCTT 57.100 39.130 0.00 0.00 45.48 3.01
1648 1726 7.563724 TTATGTGTAGGGACTAAAAAGGTCT 57.436 36.000 0.00 0.00 45.48 3.85
1649 1727 8.625786 TTTTATGTGTAGGGACTAAAAAGGTC 57.374 34.615 0.00 0.00 45.48 3.85
1650 1728 8.999905 TTTTTATGTGTAGGGACTAAAAAGGT 57.000 30.769 0.00 0.00 45.48 3.50
1672 1750 1.187087 TGTGTTTGCCGGGACTTTTT 58.813 45.000 2.18 0.00 0.00 1.94
1673 1751 1.339929 GATGTGTTTGCCGGGACTTTT 59.660 47.619 2.18 0.00 0.00 2.27
1674 1752 0.958822 GATGTGTTTGCCGGGACTTT 59.041 50.000 2.18 0.00 0.00 2.66
1675 1753 0.893727 GGATGTGTTTGCCGGGACTT 60.894 55.000 2.18 0.00 0.00 3.01
1676 1754 1.303317 GGATGTGTTTGCCGGGACT 60.303 57.895 2.18 0.00 0.00 3.85
1677 1755 2.340328 GGGATGTGTTTGCCGGGAC 61.340 63.158 2.18 0.00 0.00 4.46
1678 1756 2.034999 GGGATGTGTTTGCCGGGA 59.965 61.111 2.18 0.00 0.00 5.14
1679 1757 3.439540 CGGGATGTGTTTGCCGGG 61.440 66.667 2.18 0.00 45.72 5.73
1682 1760 3.586100 AAATAACGGGATGTGTTTGCC 57.414 42.857 0.00 0.00 0.00 4.52
1683 1761 5.571357 CACTAAAATAACGGGATGTGTTTGC 59.429 40.000 0.00 0.00 0.00 3.68
1684 1762 6.674066 ACACTAAAATAACGGGATGTGTTTG 58.326 36.000 0.00 0.00 34.32 2.93
1685 1763 6.887626 ACACTAAAATAACGGGATGTGTTT 57.112 33.333 0.00 0.00 34.32 2.83
1686 1764 6.263617 ACAACACTAAAATAACGGGATGTGTT 59.736 34.615 0.00 0.00 44.69 3.32
1687 1765 5.766174 ACAACACTAAAATAACGGGATGTGT 59.234 36.000 0.00 0.00 38.77 3.72
1688 1766 6.083630 CACAACACTAAAATAACGGGATGTG 58.916 40.000 0.00 0.00 0.00 3.21
1689 1767 5.335348 GCACAACACTAAAATAACGGGATGT 60.335 40.000 0.00 0.00 0.00 3.06
1690 1768 5.092781 GCACAACACTAAAATAACGGGATG 58.907 41.667 0.00 0.00 0.00 3.51
1691 1769 4.157105 GGCACAACACTAAAATAACGGGAT 59.843 41.667 0.00 0.00 0.00 3.85
1692 1770 3.502979 GGCACAACACTAAAATAACGGGA 59.497 43.478 0.00 0.00 0.00 5.14
1693 1771 3.504520 AGGCACAACACTAAAATAACGGG 59.495 43.478 0.00 0.00 0.00 5.28
1694 1772 4.472286 CAGGCACAACACTAAAATAACGG 58.528 43.478 0.00 0.00 0.00 4.44
1695 1773 3.911964 GCAGGCACAACACTAAAATAACG 59.088 43.478 0.00 0.00 0.00 3.18
1696 1774 3.911964 CGCAGGCACAACACTAAAATAAC 59.088 43.478 0.00 0.00 0.00 1.89
1697 1775 3.057876 CCGCAGGCACAACACTAAAATAA 60.058 43.478 0.00 0.00 46.14 1.40
1698 1776 2.486203 CCGCAGGCACAACACTAAAATA 59.514 45.455 0.00 0.00 46.14 1.40
1699 1777 1.269448 CCGCAGGCACAACACTAAAAT 59.731 47.619 0.00 0.00 46.14 1.82
1716 1794 1.135523 GCAAAGCTAAGCAGTCCGC 59.864 57.895 5.51 0.00 42.91 5.54
1732 1810 5.420725 TGAGAAGGCTATAAAACAGAGCA 57.579 39.130 0.00 0.00 43.60 4.26
1743 1821 9.499479 CTTCATTTATGTACATGAGAAGGCTAT 57.501 33.333 18.81 0.00 31.04 2.97
1744 1822 7.933577 CCTTCATTTATGTACATGAGAAGGCTA 59.066 37.037 28.02 7.56 42.82 3.93
1745 1823 6.769822 CCTTCATTTATGTACATGAGAAGGCT 59.230 38.462 28.02 6.37 42.82 4.58
1746 1824 6.767902 TCCTTCATTTATGTACATGAGAAGGC 59.232 38.462 30.80 0.00 46.44 4.35
1854 1935 9.478238 TGGAGATGAATCAAGGATCAATTTTAA 57.522 29.630 0.00 0.00 0.00 1.52
1855 1936 9.128404 CTGGAGATGAATCAAGGATCAATTTTA 57.872 33.333 0.00 0.00 0.00 1.52
1907 1993 3.054287 CCTTAAAGGAAAGGGGAGACTCC 60.054 52.174 13.60 13.60 42.08 3.85
1908 1994 4.223556 CCTTAAAGGAAAGGGGAGACTC 57.776 50.000 0.00 0.00 42.08 3.36
1916 2002 1.953785 GCGGTCCCCTTAAAGGAAAGG 60.954 57.143 0.00 0.00 44.87 3.11
1917 2003 1.004394 AGCGGTCCCCTTAAAGGAAAG 59.996 52.381 0.00 0.00 37.67 2.62
1918 2004 1.069775 AGCGGTCCCCTTAAAGGAAA 58.930 50.000 0.00 0.00 37.67 3.13
1919 2005 1.835531 CTAGCGGTCCCCTTAAAGGAA 59.164 52.381 0.00 0.00 37.67 3.36
1920 2006 1.492764 CTAGCGGTCCCCTTAAAGGA 58.507 55.000 0.00 0.00 37.67 3.36
1921 2007 0.468648 CCTAGCGGTCCCCTTAAAGG 59.531 60.000 0.00 0.00 34.30 3.11
1922 2008 0.179054 GCCTAGCGGTCCCCTTAAAG 60.179 60.000 0.00 0.00 0.00 1.85
1923 2009 1.909975 GCCTAGCGGTCCCCTTAAA 59.090 57.895 0.00 0.00 0.00 1.52
1924 2010 3.638132 GCCTAGCGGTCCCCTTAA 58.362 61.111 0.00 0.00 0.00 1.85
1936 2022 4.760047 AAGCACACCCGCGCCTAG 62.760 66.667 0.00 0.00 36.85 3.02
1943 2029 2.141122 AATTTCGGCAAGCACACCCG 62.141 55.000 0.00 0.00 43.21 5.28
1944 2030 0.033366 AAATTTCGGCAAGCACACCC 59.967 50.000 0.00 0.00 0.00 4.61
1945 2031 1.792367 GAAAATTTCGGCAAGCACACC 59.208 47.619 0.00 0.00 0.00 4.16
1957 2043 1.061566 CGTAGACCGGCCGAAAATTTC 59.938 52.381 30.73 12.41 0.00 2.17
1958 2044 1.081094 CGTAGACCGGCCGAAAATTT 58.919 50.000 30.73 8.26 0.00 1.82
1959 2045 1.363885 GCGTAGACCGGCCGAAAATT 61.364 55.000 30.73 9.80 36.94 1.82
1960 2046 1.812507 GCGTAGACCGGCCGAAAAT 60.813 57.895 30.73 12.19 36.94 1.82
1961 2047 2.432972 GCGTAGACCGGCCGAAAA 60.433 61.111 30.73 5.96 36.94 2.29
1977 2063 2.289444 TGCTTATATCCAACGCTAGGGC 60.289 50.000 6.73 0.00 0.00 5.19
1978 2064 3.244078 TGTGCTTATATCCAACGCTAGGG 60.244 47.826 5.05 5.05 0.00 3.53
1979 2065 3.990092 TGTGCTTATATCCAACGCTAGG 58.010 45.455 0.00 0.00 0.00 3.02
1980 2066 8.808529 GTTATATGTGCTTATATCCAACGCTAG 58.191 37.037 0.00 0.00 0.00 3.42
1981 2067 7.762615 GGTTATATGTGCTTATATCCAACGCTA 59.237 37.037 0.00 0.00 29.71 4.26
1982 2068 6.594159 GGTTATATGTGCTTATATCCAACGCT 59.406 38.462 0.00 0.00 29.71 5.07
1983 2069 6.370442 TGGTTATATGTGCTTATATCCAACGC 59.630 38.462 10.17 0.00 33.77 4.84
1984 2070 7.899178 TGGTTATATGTGCTTATATCCAACG 57.101 36.000 10.17 0.00 33.77 4.10
1985 2071 9.448438 TGATGGTTATATGTGCTTATATCCAAC 57.552 33.333 13.88 12.56 37.41 3.77
1986 2072 9.671279 CTGATGGTTATATGTGCTTATATCCAA 57.329 33.333 13.88 4.32 37.41 3.53
1987 2073 9.045745 TCTGATGGTTATATGTGCTTATATCCA 57.954 33.333 12.96 12.96 37.88 3.41
1991 2077 9.045745 TGGATCTGATGGTTATATGTGCTTATA 57.954 33.333 0.00 0.00 0.00 0.98
1992 2078 7.921304 TGGATCTGATGGTTATATGTGCTTAT 58.079 34.615 0.00 0.00 0.00 1.73
1993 2079 7.235399 TCTGGATCTGATGGTTATATGTGCTTA 59.765 37.037 0.00 0.00 0.00 3.09
1994 2080 6.043590 TCTGGATCTGATGGTTATATGTGCTT 59.956 38.462 0.00 0.00 0.00 3.91
1995 2081 5.545335 TCTGGATCTGATGGTTATATGTGCT 59.455 40.000 0.00 0.00 0.00 4.40
1996 2082 5.798132 TCTGGATCTGATGGTTATATGTGC 58.202 41.667 0.00 0.00 0.00 4.57
1997 2083 7.002250 ACTCTGGATCTGATGGTTATATGTG 57.998 40.000 0.00 0.00 0.00 3.21
1998 2084 8.173412 TCTACTCTGGATCTGATGGTTATATGT 58.827 37.037 0.00 0.00 0.00 2.29
1999 2085 8.586879 TCTACTCTGGATCTGATGGTTATATG 57.413 38.462 0.00 0.00 0.00 1.78
2000 2086 9.607333 TTTCTACTCTGGATCTGATGGTTATAT 57.393 33.333 0.00 0.00 0.00 0.86
2001 2087 9.434275 TTTTCTACTCTGGATCTGATGGTTATA 57.566 33.333 0.00 0.00 0.00 0.98
2002 2088 7.921041 TTTCTACTCTGGATCTGATGGTTAT 57.079 36.000 0.00 0.00 0.00 1.89
2003 2089 7.733773 TTTTCTACTCTGGATCTGATGGTTA 57.266 36.000 0.00 0.00 0.00 2.85
2004 2090 6.627087 TTTTCTACTCTGGATCTGATGGTT 57.373 37.500 0.00 0.00 0.00 3.67
2005 2091 6.627087 TTTTTCTACTCTGGATCTGATGGT 57.373 37.500 0.00 0.00 0.00 3.55
2029 2115 2.996621 CGTGAGCGAGAAGGAGATTTTT 59.003 45.455 0.00 0.00 41.33 1.94
2030 2116 2.028930 ACGTGAGCGAGAAGGAGATTTT 60.029 45.455 0.00 0.00 42.00 1.82
2031 2117 1.546476 ACGTGAGCGAGAAGGAGATTT 59.454 47.619 0.00 0.00 42.00 2.17
2032 2118 1.178276 ACGTGAGCGAGAAGGAGATT 58.822 50.000 0.00 0.00 42.00 2.40
2033 2119 1.671845 GTACGTGAGCGAGAAGGAGAT 59.328 52.381 0.00 0.00 42.00 2.75
2034 2120 1.085091 GTACGTGAGCGAGAAGGAGA 58.915 55.000 0.00 0.00 42.00 3.71
2035 2121 0.803117 TGTACGTGAGCGAGAAGGAG 59.197 55.000 0.00 0.00 42.00 3.69
2036 2122 1.068748 GTTGTACGTGAGCGAGAAGGA 60.069 52.381 0.00 0.00 42.00 3.36
2037 2123 1.068472 AGTTGTACGTGAGCGAGAAGG 60.068 52.381 0.00 0.00 42.00 3.46
2038 2124 2.243407 GAGTTGTACGTGAGCGAGAAG 58.757 52.381 0.00 0.00 42.00 2.85
2039 2125 1.068748 GGAGTTGTACGTGAGCGAGAA 60.069 52.381 0.00 0.00 42.00 2.87
2040 2126 0.520404 GGAGTTGTACGTGAGCGAGA 59.480 55.000 0.00 0.00 42.00 4.04
2041 2127 0.240145 TGGAGTTGTACGTGAGCGAG 59.760 55.000 0.00 0.00 42.00 5.03
2042 2128 0.885879 ATGGAGTTGTACGTGAGCGA 59.114 50.000 0.00 0.00 42.00 4.93
2043 2129 0.992072 CATGGAGTTGTACGTGAGCG 59.008 55.000 0.00 0.00 44.93 5.03
2044 2130 1.993370 GTCATGGAGTTGTACGTGAGC 59.007 52.381 0.00 0.00 33.64 4.26
2045 2131 3.297830 TGTCATGGAGTTGTACGTGAG 57.702 47.619 0.00 0.00 33.64 3.51
2046 2132 3.509967 AGATGTCATGGAGTTGTACGTGA 59.490 43.478 0.00 0.00 0.00 4.35
2047 2133 3.849911 AGATGTCATGGAGTTGTACGTG 58.150 45.455 0.00 0.00 0.00 4.49
2048 2134 3.509967 TGAGATGTCATGGAGTTGTACGT 59.490 43.478 0.00 0.00 0.00 3.57
2049 2135 3.859961 GTGAGATGTCATGGAGTTGTACG 59.140 47.826 0.00 0.00 34.36 3.67
2050 2136 4.820897 TGTGAGATGTCATGGAGTTGTAC 58.179 43.478 0.00 0.00 34.36 2.90
2051 2137 4.621510 GCTGTGAGATGTCATGGAGTTGTA 60.622 45.833 0.00 0.00 34.36 2.41
2052 2138 3.867600 GCTGTGAGATGTCATGGAGTTGT 60.868 47.826 0.00 0.00 34.36 3.32
2053 2139 2.676839 GCTGTGAGATGTCATGGAGTTG 59.323 50.000 0.00 0.00 34.36 3.16
2054 2140 2.355513 GGCTGTGAGATGTCATGGAGTT 60.356 50.000 0.00 0.00 34.36 3.01
2055 2141 1.209019 GGCTGTGAGATGTCATGGAGT 59.791 52.381 0.00 0.00 34.36 3.85
2056 2142 1.208776 TGGCTGTGAGATGTCATGGAG 59.791 52.381 0.00 0.00 34.36 3.86
2057 2143 1.065926 GTGGCTGTGAGATGTCATGGA 60.066 52.381 0.00 0.00 34.36 3.41
2058 2144 1.065636 AGTGGCTGTGAGATGTCATGG 60.066 52.381 0.00 0.00 34.36 3.66
2059 2145 2.398252 AGTGGCTGTGAGATGTCATG 57.602 50.000 0.00 0.00 34.36 3.07
2060 2146 2.708051 CAAGTGGCTGTGAGATGTCAT 58.292 47.619 0.00 0.00 34.36 3.06
2061 2147 1.879372 GCAAGTGGCTGTGAGATGTCA 60.879 52.381 0.00 0.00 40.25 3.58
2062 2148 0.801251 GCAAGTGGCTGTGAGATGTC 59.199 55.000 0.00 0.00 40.25 3.06
2063 2149 2.938354 GCAAGTGGCTGTGAGATGT 58.062 52.632 0.00 0.00 40.25 3.06
2073 2159 2.459442 CGAGCTGCTAGCAAGTGGC 61.459 63.158 19.86 18.03 45.56 5.01
2074 2160 2.459442 GCGAGCTGCTAGCAAGTGG 61.459 63.158 26.43 10.89 45.56 4.00
2075 2161 2.459442 GGCGAGCTGCTAGCAAGTG 61.459 63.158 30.68 8.54 45.56 3.16
2076 2162 2.125350 GGCGAGCTGCTAGCAAGT 60.125 61.111 30.68 8.63 45.56 3.16
2077 2163 3.260483 CGGCGAGCTGCTAGCAAG 61.260 66.667 30.68 21.51 45.56 4.01
2078 2164 4.819761 CCGGCGAGCTGCTAGCAA 62.820 66.667 30.68 2.68 45.56 3.91
2080 2166 4.940593 CTCCGGCGAGCTGCTAGC 62.941 72.222 24.01 24.01 45.43 3.42
2130 2216 3.663176 CACCGGTGCTGCAACCAG 61.663 66.667 24.02 6.46 40.53 4.00
2140 2226 2.357517 GACCAGTGAGCACCGGTG 60.358 66.667 30.66 30.66 41.87 4.94
2141 2227 3.626924 GGACCAGTGAGCACCGGT 61.627 66.667 0.00 0.00 44.32 5.28
2142 2228 3.625897 TGGACCAGTGAGCACCGG 61.626 66.667 0.00 0.00 35.04 5.28
2143 2229 2.357517 GTGGACCAGTGAGCACCG 60.358 66.667 0.00 0.00 0.00 4.94
2144 2230 2.032681 GGTGGACCAGTGAGCACC 59.967 66.667 0.00 0.00 35.64 5.01
2145 2231 2.032681 GGGTGGACCAGTGAGCAC 59.967 66.667 0.00 0.00 39.85 4.40
2146 2232 3.249189 GGGGTGGACCAGTGAGCA 61.249 66.667 0.00 0.00 42.91 4.26
2147 2233 4.394712 CGGGGTGGACCAGTGAGC 62.395 72.222 0.00 0.00 42.91 4.26
2148 2234 3.706373 CCGGGGTGGACCAGTGAG 61.706 72.222 0.00 0.00 42.91 3.51
2174 2260 2.584694 GTCAGGCGAGCTGCTAGC 60.585 66.667 24.01 24.01 45.43 3.42
2175 2261 2.105930 GGTCAGGCGAGCTGCTAG 59.894 66.667 0.15 3.13 45.43 3.42
2176 2262 3.461773 GGGTCAGGCGAGCTGCTA 61.462 66.667 0.15 0.00 45.43 3.49
2182 2268 4.379243 ACAAGCGGGTCAGGCGAG 62.379 66.667 0.00 0.00 35.00 5.03
2183 2269 4.373116 GACAAGCGGGTCAGGCGA 62.373 66.667 6.00 0.00 37.73 5.54
2195 2281 3.036084 AACGAGCACGCCGACAAG 61.036 61.111 2.62 0.00 43.96 3.16
2196 2282 3.334751 CAACGAGCACGCCGACAA 61.335 61.111 2.62 0.00 43.96 3.18
2216 2302 3.799755 CTACAACCGGCAAGCGGC 61.800 66.667 0.00 0.00 43.74 6.53
2217 2303 3.799755 GCTACAACCGGCAAGCGG 61.800 66.667 0.00 0.00 0.00 5.52
2219 2305 4.460873 GCGCTACAACCGGCAAGC 62.461 66.667 0.00 4.43 0.00 4.01
2226 2312 2.047560 AGAACCGGCGCTACAACC 60.048 61.111 7.64 0.00 0.00 3.77
2227 2313 1.373748 TGAGAACCGGCGCTACAAC 60.374 57.895 7.64 0.00 0.00 3.32
2228 2314 1.373748 GTGAGAACCGGCGCTACAA 60.374 57.895 7.64 0.00 0.00 2.41
2229 2315 2.260434 GTGAGAACCGGCGCTACA 59.740 61.111 7.64 0.00 0.00 2.74
2230 2316 1.805945 CAGTGAGAACCGGCGCTAC 60.806 63.158 7.64 0.00 0.00 3.58
2231 2317 2.571757 CAGTGAGAACCGGCGCTA 59.428 61.111 7.64 0.00 0.00 4.26
2232 2318 4.379243 CCAGTGAGAACCGGCGCT 62.379 66.667 7.64 0.00 0.00 5.92
2233 2319 4.681978 ACCAGTGAGAACCGGCGC 62.682 66.667 0.00 0.00 0.00 6.53
2234 2320 2.432628 GACCAGTGAGAACCGGCG 60.433 66.667 0.00 0.00 0.00 6.46
2235 2321 1.374758 CAGACCAGTGAGAACCGGC 60.375 63.158 0.00 0.00 0.00 6.13
2236 2322 1.374758 GCAGACCAGTGAGAACCGG 60.375 63.158 0.00 0.00 0.00 5.28
2237 2323 1.374758 GGCAGACCAGTGAGAACCG 60.375 63.158 0.00 0.00 35.26 4.44
2238 2324 1.003233 GGGCAGACCAGTGAGAACC 60.003 63.158 0.00 0.00 39.85 3.62
2239 2325 0.321122 CAGGGCAGACCAGTGAGAAC 60.321 60.000 0.00 0.00 43.89 3.01
2240 2326 0.471780 TCAGGGCAGACCAGTGAGAA 60.472 55.000 0.00 0.00 43.89 2.87
2241 2327 0.902048 CTCAGGGCAGACCAGTGAGA 60.902 60.000 5.73 0.00 45.34 3.27
2242 2328 1.595882 CTCAGGGCAGACCAGTGAG 59.404 63.158 0.00 0.00 43.89 3.51
2243 2329 1.915266 CCTCAGGGCAGACCAGTGA 60.915 63.158 0.00 0.00 43.89 3.41
2244 2330 2.667418 CCTCAGGGCAGACCAGTG 59.333 66.667 0.00 0.00 43.89 3.66
2254 2340 4.860881 TAGCGGGAGGCCTCAGGG 62.861 72.222 33.29 21.55 45.17 4.45
2255 2341 3.230245 CTAGCGGGAGGCCTCAGG 61.230 72.222 33.29 24.01 45.17 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.