Multiple sequence alignment - TraesCS7A01G026500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G026500 chr7A 100.000 2543 0 0 1 2543 10629096 10626554 0.000000e+00 4697
1 TraesCS7A01G026500 chr7A 81.038 886 106 29 947 1777 10862611 10861733 0.000000e+00 649
2 TraesCS7A01G026500 chr7D 88.062 779 64 15 1768 2543 11327733 11326981 0.000000e+00 896
3 TraesCS7A01G026500 chr4B 82.663 646 78 12 1080 1696 247433427 247432787 2.230000e-150 542
4 TraesCS7A01G026500 chr4B 97.015 67 2 0 1689 1755 247420037 247419971 2.070000e-21 113
5 TraesCS7A01G026500 chr4A 89.333 300 28 4 1 298 726712965 726713262 8.590000e-100 374
6 TraesCS7A01G026500 chr4A 76.119 469 63 23 2049 2508 726715608 726716036 1.540000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G026500 chr7A 10626554 10629096 2542 True 4697 4697 100.000 1 2543 1 chr7A.!!$R1 2542
1 TraesCS7A01G026500 chr7A 10861733 10862611 878 True 649 649 81.038 947 1777 1 chr7A.!!$R2 830
2 TraesCS7A01G026500 chr7D 11326981 11327733 752 True 896 896 88.062 1768 2543 1 chr7D.!!$R1 775
3 TraesCS7A01G026500 chr4B 247432787 247433427 640 True 542 542 82.663 1080 1696 1 chr4B.!!$R2 616
4 TraesCS7A01G026500 chr4A 726712965 726716036 3071 False 287 374 82.726 1 2508 2 chr4A.!!$F1 2507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
911 1427 0.034477 AATCAGTACCTTTGCGGGGG 60.034 55.0 0.0 0.0 36.97 5.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 2920 1.027357 CTACAAGGACATGCATGGGC 58.973 55.0 29.41 20.15 41.68 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.504520 ACCAAAACCAAATAATCGCTCGT 59.495 39.130 0.00 0.00 0.00 4.18
94 96 9.754382 ATTTGATATTATGTTTGCTTGTGATCC 57.246 29.630 0.00 0.00 0.00 3.36
104 106 2.228059 GCTTGTGATCCATCTCCCATG 58.772 52.381 0.00 0.00 0.00 3.66
115 117 3.960755 CCATCTCCCATGTGTGAGTAGTA 59.039 47.826 0.00 0.00 0.00 1.82
116 118 4.038522 CCATCTCCCATGTGTGAGTAGTAG 59.961 50.000 0.00 0.00 0.00 2.57
120 122 5.103898 TCTCCCATGTGTGAGTAGTAGATCT 60.104 44.000 0.00 0.00 0.00 2.75
122 124 4.279671 CCCATGTGTGAGTAGTAGATCTCC 59.720 50.000 0.00 0.00 0.00 3.71
124 126 5.538053 CCATGTGTGAGTAGTAGATCTCCAT 59.462 44.000 0.00 0.00 0.00 3.41
127 129 8.801299 CATGTGTGAGTAGTAGATCTCCATTAT 58.199 37.037 0.00 0.00 0.00 1.28
146 148 3.515602 ATGGGAGATGTAGGGATTTGC 57.484 47.619 0.00 0.00 0.00 3.68
151 153 3.385577 GAGATGTAGGGATTTGCGAGAC 58.614 50.000 0.00 0.00 0.00 3.36
164 166 1.569493 CGAGACGTGGTTTTGCCTG 59.431 57.895 0.00 0.00 38.35 4.85
165 167 1.841663 CGAGACGTGGTTTTGCCTGG 61.842 60.000 0.00 0.00 38.35 4.45
168 170 2.130073 GACGTGGTTTTGCCTGGCTC 62.130 60.000 21.03 7.61 38.35 4.70
183 186 3.058432 CCTGGCTCTGATTTGATTATGCG 60.058 47.826 0.00 0.00 0.00 4.73
215 218 2.952310 GAGCTTTGGTTGAGAGGTTGTT 59.048 45.455 0.00 0.00 0.00 2.83
218 221 5.140454 AGCTTTGGTTGAGAGGTTGTTTAT 58.860 37.500 0.00 0.00 0.00 1.40
223 226 4.218200 TGGTTGAGAGGTTGTTTATGCATG 59.782 41.667 10.16 0.00 0.00 4.06
248 251 9.634021 TGGTGTATATCCATTGCTTGTTTTATA 57.366 29.630 0.00 0.00 0.00 0.98
260 263 8.554835 TTGCTTGTTTTATAATTTAAAGGCCC 57.445 30.769 0.00 0.00 0.00 5.80
261 264 7.106890 TGCTTGTTTTATAATTTAAAGGCCCC 58.893 34.615 0.00 0.00 0.00 5.80
264 267 6.865411 TGTTTTATAATTTAAAGGCCCCGAC 58.135 36.000 0.00 0.00 0.00 4.79
267 270 4.994907 ATAATTTAAAGGCCCCGACAAC 57.005 40.909 0.00 0.00 0.00 3.32
283 286 1.771854 ACAACACTACACCATGGTCCA 59.228 47.619 16.53 4.41 0.00 4.02
294 297 3.701040 CACCATGGTCCAAATTTAGAGGG 59.299 47.826 16.53 0.00 0.00 4.30
295 298 2.695147 CCATGGTCCAAATTTAGAGGGC 59.305 50.000 2.57 0.00 0.00 5.19
296 299 3.364549 CATGGTCCAAATTTAGAGGGCA 58.635 45.455 0.00 0.00 0.00 5.36
297 300 2.802719 TGGTCCAAATTTAGAGGGCAC 58.197 47.619 0.00 0.00 0.00 5.01
298 301 1.743394 GGTCCAAATTTAGAGGGCACG 59.257 52.381 0.65 0.00 0.00 5.34
299 302 2.617021 GGTCCAAATTTAGAGGGCACGA 60.617 50.000 0.00 0.00 0.00 4.35
302 305 5.063880 GTCCAAATTTAGAGGGCACGATAT 58.936 41.667 0.00 0.00 0.00 1.63
303 306 5.179555 GTCCAAATTTAGAGGGCACGATATC 59.820 44.000 0.00 0.00 0.00 1.63
304 307 5.071788 TCCAAATTTAGAGGGCACGATATCT 59.928 40.000 0.34 0.00 0.00 1.98
305 308 5.180117 CCAAATTTAGAGGGCACGATATCTG 59.820 44.000 0.34 0.00 0.00 2.90
306 309 3.386768 TTTAGAGGGCACGATATCTGC 57.613 47.619 14.95 14.95 0.00 4.26
310 313 2.357517 GGCACGATATCTGCCGGG 60.358 66.667 22.28 5.18 44.78 5.73
312 315 1.069090 GCACGATATCTGCCGGGAA 59.931 57.895 2.18 0.00 0.00 3.97
313 316 0.531974 GCACGATATCTGCCGGGAAA 60.532 55.000 2.18 0.00 0.00 3.13
314 317 1.948104 CACGATATCTGCCGGGAAAA 58.052 50.000 2.18 0.00 0.00 2.29
315 318 1.597663 CACGATATCTGCCGGGAAAAC 59.402 52.381 2.18 0.00 0.00 2.43
316 319 1.485066 ACGATATCTGCCGGGAAAACT 59.515 47.619 2.18 0.00 0.00 2.66
317 320 1.867233 CGATATCTGCCGGGAAAACTG 59.133 52.381 2.18 0.00 0.00 3.16
324 327 2.268076 CCGGGAAAACTGGCCAGTG 61.268 63.158 38.35 23.63 41.58 3.66
325 328 2.919494 CGGGAAAACTGGCCAGTGC 61.919 63.158 38.35 27.74 41.58 4.40
326 329 1.832167 GGGAAAACTGGCCAGTGCA 60.832 57.895 38.35 0.00 41.58 4.57
327 330 1.398958 GGGAAAACTGGCCAGTGCAA 61.399 55.000 38.35 0.00 41.58 4.08
332 335 2.031012 CTGGCCAGTGCAAGTCGA 59.969 61.111 25.53 0.00 40.13 4.20
333 336 1.376424 CTGGCCAGTGCAAGTCGAT 60.376 57.895 25.53 0.00 40.13 3.59
335 338 1.078848 GGCCAGTGCAAGTCGATCT 60.079 57.895 0.00 0.00 40.13 2.75
336 339 0.175760 GGCCAGTGCAAGTCGATCTA 59.824 55.000 0.00 0.00 40.13 1.98
343 849 4.211164 CAGTGCAAGTCGATCTAAACACAA 59.789 41.667 0.00 0.00 0.00 3.33
345 851 5.470098 AGTGCAAGTCGATCTAAACACAATT 59.530 36.000 0.00 0.00 0.00 2.32
354 860 9.953825 GTCGATCTAAACACAATTTTACTACAG 57.046 33.333 0.00 0.00 0.00 2.74
404 910 5.369993 GGGTAGTTAAGATTGGGATCCTCTT 59.630 44.000 16.52 16.52 32.44 2.85
408 914 6.794534 AGTTAAGATTGGGATCCTCTTTTGT 58.205 36.000 17.27 3.19 32.44 2.83
412 918 2.691409 TGGGATCCTCTTTTGTAGCG 57.309 50.000 12.58 0.00 0.00 4.26
416 922 3.455327 GGATCCTCTTTTGTAGCGGTAC 58.545 50.000 17.67 17.67 30.39 3.34
425 931 2.642139 TGTAGCGGTACTGCTGTTAC 57.358 50.000 34.54 25.59 46.70 2.50
426 932 1.135603 TGTAGCGGTACTGCTGTTACG 60.136 52.381 34.54 9.34 46.70 3.18
427 933 0.452987 TAGCGGTACTGCTGTTACGG 59.547 55.000 34.54 11.50 46.70 4.02
428 934 2.450345 GCGGTACTGCTGTTACGGC 61.450 63.158 19.72 9.54 36.10 5.68
448 954 1.006102 GGTCACTGTCGTGTGGAGG 60.006 63.158 0.00 0.00 41.89 4.30
461 967 4.394712 GGAGGCTGACCCCACGTG 62.395 72.222 9.08 9.08 36.11 4.49
466 972 1.741770 GCTGACCCCACGTGTCATC 60.742 63.158 15.65 8.87 41.58 2.92
467 973 1.446099 CTGACCCCACGTGTCATCG 60.446 63.158 15.65 0.00 41.58 3.84
468 974 2.813908 GACCCCACGTGTCATCGC 60.814 66.667 15.65 0.00 32.91 4.58
469 975 3.296709 GACCCCACGTGTCATCGCT 62.297 63.158 15.65 0.00 32.91 4.93
470 976 1.940883 GACCCCACGTGTCATCGCTA 61.941 60.000 15.65 0.00 32.91 4.26
476 984 1.386748 CACGTGTCATCGCTAAGTGTG 59.613 52.381 7.58 0.00 0.00 3.82
479 987 1.067142 GTGTCATCGCTAAGTGTGGGA 60.067 52.381 0.00 0.00 0.00 4.37
487 995 2.811431 CGCTAAGTGTGGGATGTTTTGA 59.189 45.455 0.00 0.00 0.00 2.69
496 1004 2.627699 TGGGATGTTTTGAGCTTTGGAC 59.372 45.455 0.00 0.00 0.00 4.02
514 1022 0.106369 ACATCCCTGTCCGTCGGATA 60.106 55.000 18.75 14.39 34.55 2.59
516 1024 1.618837 CATCCCTGTCCGTCGGATATT 59.381 52.381 18.75 0.00 34.55 1.28
517 1025 1.037493 TCCCTGTCCGTCGGATATTG 58.963 55.000 18.75 8.77 32.73 1.90
521 1029 2.585845 CTGTCCGTCGGATATTGATCG 58.414 52.381 18.75 0.00 32.73 3.69
523 1031 1.538512 GTCCGTCGGATATTGATCGGA 59.461 52.381 18.75 13.41 43.52 4.55
524 1032 1.810755 TCCGTCGGATATTGATCGGAG 59.189 52.381 10.71 0.00 40.83 4.63
528 1036 2.561419 GTCGGATATTGATCGGAGGGAA 59.439 50.000 0.00 0.00 40.83 3.97
529 1037 2.826128 TCGGATATTGATCGGAGGGAAG 59.174 50.000 0.00 0.00 36.72 3.46
530 1038 2.826128 CGGATATTGATCGGAGGGAAGA 59.174 50.000 0.00 0.00 35.02 2.87
531 1039 3.449018 CGGATATTGATCGGAGGGAAGAT 59.551 47.826 0.00 0.00 35.02 2.40
532 1040 4.679106 CGGATATTGATCGGAGGGAAGATG 60.679 50.000 0.00 0.00 35.02 2.90
534 1042 5.395103 GGATATTGATCGGAGGGAAGATGAG 60.395 48.000 0.00 0.00 32.28 2.90
535 1043 2.755952 TGATCGGAGGGAAGATGAGA 57.244 50.000 0.00 0.00 0.00 3.27
536 1044 3.032265 TGATCGGAGGGAAGATGAGAA 57.968 47.619 0.00 0.00 0.00 2.87
537 1045 2.961741 TGATCGGAGGGAAGATGAGAAG 59.038 50.000 0.00 0.00 0.00 2.85
538 1046 1.781786 TCGGAGGGAAGATGAGAAGG 58.218 55.000 0.00 0.00 0.00 3.46
539 1047 0.755686 CGGAGGGAAGATGAGAAGGG 59.244 60.000 0.00 0.00 0.00 3.95
540 1048 1.886422 GGAGGGAAGATGAGAAGGGT 58.114 55.000 0.00 0.00 0.00 4.34
541 1049 1.765904 GGAGGGAAGATGAGAAGGGTC 59.234 57.143 0.00 0.00 0.00 4.46
542 1050 2.472029 GAGGGAAGATGAGAAGGGTCA 58.528 52.381 0.00 0.00 0.00 4.02
543 1051 2.433970 GAGGGAAGATGAGAAGGGTCAG 59.566 54.545 0.00 0.00 0.00 3.51
545 1053 2.192263 GGAAGATGAGAAGGGTCAGGT 58.808 52.381 0.00 0.00 0.00 4.00
546 1054 3.375699 GGAAGATGAGAAGGGTCAGGTA 58.624 50.000 0.00 0.00 0.00 3.08
547 1055 3.775316 GGAAGATGAGAAGGGTCAGGTAA 59.225 47.826 0.00 0.00 0.00 2.85
548 1056 4.383226 GGAAGATGAGAAGGGTCAGGTAAC 60.383 50.000 0.00 0.00 0.00 2.50
549 1057 2.761208 AGATGAGAAGGGTCAGGTAACG 59.239 50.000 0.00 0.00 46.39 3.18
550 1058 1.263356 TGAGAAGGGTCAGGTAACGG 58.737 55.000 0.00 0.00 46.39 4.44
551 1059 1.264295 GAGAAGGGTCAGGTAACGGT 58.736 55.000 0.00 0.00 46.39 4.83
552 1060 0.974383 AGAAGGGTCAGGTAACGGTG 59.026 55.000 0.00 0.00 46.39 4.94
553 1061 0.971386 GAAGGGTCAGGTAACGGTGA 59.029 55.000 0.00 0.00 46.39 4.02
554 1062 0.974383 AAGGGTCAGGTAACGGTGAG 59.026 55.000 0.00 0.00 46.39 3.51
555 1063 0.903454 AGGGTCAGGTAACGGTGAGG 60.903 60.000 0.00 0.00 46.39 3.86
556 1064 1.190178 GGGTCAGGTAACGGTGAGGT 61.190 60.000 0.00 0.00 46.39 3.85
557 1065 0.037605 GGTCAGGTAACGGTGAGGTG 60.038 60.000 0.00 0.00 46.39 4.00
558 1066 0.963962 GTCAGGTAACGGTGAGGTGA 59.036 55.000 0.00 0.00 46.39 4.02
559 1067 1.067776 GTCAGGTAACGGTGAGGTGAG 60.068 57.143 0.00 0.00 46.39 3.51
560 1068 0.966920 CAGGTAACGGTGAGGTGAGT 59.033 55.000 0.00 0.00 46.39 3.41
561 1069 1.343465 CAGGTAACGGTGAGGTGAGTT 59.657 52.381 0.00 0.00 46.39 3.01
562 1070 2.559668 CAGGTAACGGTGAGGTGAGTTA 59.440 50.000 0.00 0.00 46.39 2.24
563 1071 2.560105 AGGTAACGGTGAGGTGAGTTAC 59.440 50.000 8.35 8.35 44.66 2.50
575 1083 2.680577 GTGAGTTACCACTTACCACCG 58.319 52.381 0.00 0.00 34.16 4.94
584 1092 2.361438 CCACTTACCACCGAGTATCTCC 59.639 54.545 0.00 0.00 0.00 3.71
586 1094 2.024655 ACTTACCACCGAGTATCTCCCA 60.025 50.000 0.00 0.00 0.00 4.37
618 1126 1.359117 GCGGATTCATCCTCGTCGA 59.641 57.895 4.30 0.00 44.93 4.20
622 1130 1.597445 GGATTCATCCTCGTCGACGAC 60.597 57.143 34.97 22.03 43.40 4.34
631 1139 2.177778 GTCGACGACGGGGAGAAC 59.822 66.667 12.94 0.00 40.21 3.01
636 1144 3.367743 CGACGGGGAGAACGGTGA 61.368 66.667 0.00 0.00 35.23 4.02
643 1151 0.175989 GGGAGAACGGTGATCTGGAC 59.824 60.000 0.00 0.00 0.00 4.02
652 1167 1.471119 GTGATCTGGACTGTCCCGTA 58.529 55.000 23.42 9.58 35.03 4.02
676 1191 2.588439 GAGGTAAGCCGAACCCCC 59.412 66.667 0.00 0.00 37.77 5.40
693 1209 1.106944 CCCCGCCTCTCTCTCTTCTC 61.107 65.000 0.00 0.00 0.00 2.87
695 1211 0.395036 CCGCCTCTCTCTCTTCTCCA 60.395 60.000 0.00 0.00 0.00 3.86
701 1217 2.682856 CTCTCTCTCTTCTCCAACTCCG 59.317 54.545 0.00 0.00 0.00 4.63
703 1219 0.174617 CTCTCTTCTCCAACTCCGGC 59.825 60.000 0.00 0.00 0.00 6.13
704 1220 0.251832 TCTCTTCTCCAACTCCGGCT 60.252 55.000 0.00 0.00 0.00 5.52
705 1221 0.174617 CTCTTCTCCAACTCCGGCTC 59.825 60.000 0.00 0.00 0.00 4.70
706 1222 1.219393 CTTCTCCAACTCCGGCTCC 59.781 63.158 0.00 0.00 0.00 4.70
707 1223 2.564553 CTTCTCCAACTCCGGCTCCG 62.565 65.000 0.00 0.48 39.44 4.63
708 1224 3.382832 CTCCAACTCCGGCTCCGT 61.383 66.667 7.59 0.00 37.81 4.69
709 1225 2.036098 TCCAACTCCGGCTCCGTA 59.964 61.111 7.59 0.00 37.81 4.02
710 1226 2.005960 CTCCAACTCCGGCTCCGTAG 62.006 65.000 7.59 3.36 37.81 3.51
712 1228 1.139095 CAACTCCGGCTCCGTAGTC 59.861 63.158 7.00 0.00 37.63 2.59
713 1229 2.050934 AACTCCGGCTCCGTAGTCC 61.051 63.158 7.00 0.00 37.63 3.85
742 1258 2.759973 CACTCTGCCGGAGCCCTA 60.760 66.667 5.05 0.00 45.48 3.53
743 1259 2.443016 ACTCTGCCGGAGCCCTAG 60.443 66.667 5.05 0.00 45.48 3.02
744 1260 3.230245 CTCTGCCGGAGCCCTAGG 61.230 72.222 5.05 0.06 38.69 3.02
750 1266 2.053618 CCGGAGCCCTAGGAGATTG 58.946 63.158 11.48 0.00 0.00 2.67
751 1267 0.760945 CCGGAGCCCTAGGAGATTGT 60.761 60.000 11.48 0.00 0.00 2.71
752 1268 1.123928 CGGAGCCCTAGGAGATTGTT 58.876 55.000 11.48 0.00 0.00 2.83
753 1269 1.486726 CGGAGCCCTAGGAGATTGTTT 59.513 52.381 11.48 0.00 0.00 2.83
754 1270 2.092914 CGGAGCCCTAGGAGATTGTTTT 60.093 50.000 11.48 0.00 0.00 2.43
755 1271 3.546724 GGAGCCCTAGGAGATTGTTTTC 58.453 50.000 11.48 0.00 0.00 2.29
756 1272 3.546724 GAGCCCTAGGAGATTGTTTTCC 58.453 50.000 11.48 0.00 0.00 3.13
759 1275 2.289565 CCTAGGAGATTGTTTTCCGGC 58.710 52.381 1.05 0.00 38.54 6.13
760 1276 2.355716 CCTAGGAGATTGTTTTCCGGCA 60.356 50.000 1.05 0.00 38.54 5.69
761 1277 2.514458 AGGAGATTGTTTTCCGGCAT 57.486 45.000 0.00 0.00 38.54 4.40
762 1278 2.807676 AGGAGATTGTTTTCCGGCATT 58.192 42.857 0.00 0.00 38.54 3.56
763 1279 3.963129 AGGAGATTGTTTTCCGGCATTA 58.037 40.909 0.00 0.00 38.54 1.90
764 1280 4.536765 AGGAGATTGTTTTCCGGCATTAT 58.463 39.130 0.00 0.00 38.54 1.28
765 1281 5.690865 AGGAGATTGTTTTCCGGCATTATA 58.309 37.500 0.00 0.00 38.54 0.98
766 1282 5.765182 AGGAGATTGTTTTCCGGCATTATAG 59.235 40.000 0.00 0.00 38.54 1.31
768 1284 6.431234 GGAGATTGTTTTCCGGCATTATAGAT 59.569 38.462 0.00 0.00 0.00 1.98
770 1286 6.431234 AGATTGTTTTCCGGCATTATAGATCC 59.569 38.462 0.00 0.00 0.00 3.36
771 1287 5.042463 TGTTTTCCGGCATTATAGATCCA 57.958 39.130 0.00 0.00 0.00 3.41
772 1288 5.063204 TGTTTTCCGGCATTATAGATCCAG 58.937 41.667 0.00 0.00 0.00 3.86
773 1289 5.163248 TGTTTTCCGGCATTATAGATCCAGA 60.163 40.000 0.00 0.00 0.00 3.86
774 1290 4.808414 TTCCGGCATTATAGATCCAGAG 57.192 45.455 0.00 0.00 0.00 3.35
777 1293 3.306989 CCGGCATTATAGATCCAGAGCAA 60.307 47.826 0.00 0.00 0.00 3.91
778 1294 4.511527 CGGCATTATAGATCCAGAGCAAT 58.488 43.478 0.00 0.00 0.00 3.56
779 1295 4.569966 CGGCATTATAGATCCAGAGCAATC 59.430 45.833 0.00 0.00 0.00 2.67
780 1296 5.494724 GGCATTATAGATCCAGAGCAATCA 58.505 41.667 0.00 0.00 0.00 2.57
781 1297 5.942236 GGCATTATAGATCCAGAGCAATCAA 59.058 40.000 0.00 0.00 0.00 2.57
783 1299 7.122353 GGCATTATAGATCCAGAGCAATCAAAT 59.878 37.037 0.00 0.00 0.00 2.32
784 1300 8.182881 GCATTATAGATCCAGAGCAATCAAATC 58.817 37.037 0.00 0.00 0.00 2.17
785 1301 8.675504 CATTATAGATCCAGAGCAATCAAATCC 58.324 37.037 0.00 0.00 0.00 3.01
786 1302 3.474600 AGATCCAGAGCAATCAAATCCG 58.525 45.455 0.00 0.00 0.00 4.18
787 1303 1.382522 TCCAGAGCAATCAAATCCGC 58.617 50.000 0.00 0.00 0.00 5.54
788 1304 0.383231 CCAGAGCAATCAAATCCGCC 59.617 55.000 0.00 0.00 0.00 6.13
789 1305 0.383231 CAGAGCAATCAAATCCGCCC 59.617 55.000 0.00 0.00 0.00 6.13
790 1306 0.257039 AGAGCAATCAAATCCGCCCT 59.743 50.000 0.00 0.00 0.00 5.19
791 1307 1.490490 AGAGCAATCAAATCCGCCCTA 59.510 47.619 0.00 0.00 0.00 3.53
792 1308 1.604278 GAGCAATCAAATCCGCCCTAC 59.396 52.381 0.00 0.00 0.00 3.18
793 1309 1.064758 AGCAATCAAATCCGCCCTACA 60.065 47.619 0.00 0.00 0.00 2.74
794 1310 1.334869 GCAATCAAATCCGCCCTACAG 59.665 52.381 0.00 0.00 0.00 2.74
796 1312 3.016736 CAATCAAATCCGCCCTACAGTT 58.983 45.455 0.00 0.00 0.00 3.16
797 1313 2.396590 TCAAATCCGCCCTACAGTTC 57.603 50.000 0.00 0.00 0.00 3.01
798 1314 1.065709 TCAAATCCGCCCTACAGTTCC 60.066 52.381 0.00 0.00 0.00 3.62
799 1315 1.065418 CAAATCCGCCCTACAGTTCCT 60.065 52.381 0.00 0.00 0.00 3.36
800 1316 1.286248 AATCCGCCCTACAGTTCCTT 58.714 50.000 0.00 0.00 0.00 3.36
802 1318 0.611714 TCCGCCCTACAGTTCCTTTC 59.388 55.000 0.00 0.00 0.00 2.62
803 1319 0.392595 CCGCCCTACAGTTCCTTTCC 60.393 60.000 0.00 0.00 0.00 3.13
804 1320 0.739813 CGCCCTACAGTTCCTTTCCG 60.740 60.000 0.00 0.00 0.00 4.30
805 1321 0.611714 GCCCTACAGTTCCTTTCCGA 59.388 55.000 0.00 0.00 0.00 4.55
806 1322 1.405661 GCCCTACAGTTCCTTTCCGAG 60.406 57.143 0.00 0.00 0.00 4.63
807 1323 2.176889 CCCTACAGTTCCTTTCCGAGA 58.823 52.381 0.00 0.00 0.00 4.04
808 1324 2.766828 CCCTACAGTTCCTTTCCGAGAT 59.233 50.000 0.00 0.00 0.00 2.75
809 1325 3.958798 CCCTACAGTTCCTTTCCGAGATA 59.041 47.826 0.00 0.00 0.00 1.98
810 1326 4.404715 CCCTACAGTTCCTTTCCGAGATAA 59.595 45.833 0.00 0.00 0.00 1.75
812 1328 6.217294 CCTACAGTTCCTTTCCGAGATAATC 58.783 44.000 0.00 0.00 0.00 1.75
813 1329 5.941555 ACAGTTCCTTTCCGAGATAATCT 57.058 39.130 0.00 0.00 0.00 2.40
814 1330 5.665459 ACAGTTCCTTTCCGAGATAATCTG 58.335 41.667 0.00 0.00 0.00 2.90
815 1331 5.422331 ACAGTTCCTTTCCGAGATAATCTGA 59.578 40.000 0.00 0.00 0.00 3.27
816 1332 6.098982 ACAGTTCCTTTCCGAGATAATCTGAT 59.901 38.462 0.00 0.00 0.00 2.90
817 1333 6.644592 CAGTTCCTTTCCGAGATAATCTGATC 59.355 42.308 0.00 0.00 0.00 2.92
819 1335 5.147767 TCCTTTCCGAGATAATCTGATCCA 58.852 41.667 0.00 0.00 0.00 3.41
820 1336 5.602561 TCCTTTCCGAGATAATCTGATCCAA 59.397 40.000 0.00 0.00 0.00 3.53
821 1337 6.270927 TCCTTTCCGAGATAATCTGATCCAAT 59.729 38.462 0.00 0.00 0.00 3.16
822 1338 6.370994 CCTTTCCGAGATAATCTGATCCAATG 59.629 42.308 0.00 0.00 0.00 2.82
823 1339 4.825422 TCCGAGATAATCTGATCCAATGC 58.175 43.478 0.00 0.00 0.00 3.56
824 1340 3.615937 CCGAGATAATCTGATCCAATGCG 59.384 47.826 0.00 0.00 0.00 4.73
825 1341 3.061831 CGAGATAATCTGATCCAATGCGC 59.938 47.826 0.00 0.00 0.00 6.09
826 1342 3.999001 GAGATAATCTGATCCAATGCGCA 59.001 43.478 14.96 14.96 0.00 6.09
827 1343 3.750130 AGATAATCTGATCCAATGCGCAC 59.250 43.478 14.90 0.00 0.00 5.34
828 1344 2.048444 AATCTGATCCAATGCGCACT 57.952 45.000 14.90 0.00 0.00 4.40
829 1345 1.306148 ATCTGATCCAATGCGCACTG 58.694 50.000 14.90 13.71 0.00 3.66
830 1346 0.036105 TCTGATCCAATGCGCACTGT 60.036 50.000 18.52 0.00 0.00 3.55
831 1347 0.806868 CTGATCCAATGCGCACTGTT 59.193 50.000 18.52 4.56 0.00 3.16
832 1348 0.804364 TGATCCAATGCGCACTGTTC 59.196 50.000 18.52 14.17 0.00 3.18
833 1349 1.089920 GATCCAATGCGCACTGTTCT 58.910 50.000 18.52 1.18 0.00 3.01
834 1350 0.806868 ATCCAATGCGCACTGTTCTG 59.193 50.000 18.52 2.06 0.00 3.02
835 1351 0.250252 TCCAATGCGCACTGTTCTGA 60.250 50.000 18.52 4.71 0.00 3.27
836 1352 0.167470 CCAATGCGCACTGTTCTGAG 59.833 55.000 18.52 0.00 0.00 3.35
837 1353 1.150827 CAATGCGCACTGTTCTGAGA 58.849 50.000 14.90 0.00 0.00 3.27
838 1354 1.128136 CAATGCGCACTGTTCTGAGAG 59.872 52.381 14.90 0.00 0.00 3.20
839 1355 1.018226 ATGCGCACTGTTCTGAGAGC 61.018 55.000 14.90 0.00 0.00 4.09
840 1356 2.386660 GCGCACTGTTCTGAGAGCC 61.387 63.158 0.30 0.00 0.00 4.70
841 1357 2.091112 CGCACTGTTCTGAGAGCCG 61.091 63.158 0.00 0.00 0.00 5.52
842 1358 1.739562 GCACTGTTCTGAGAGCCGG 60.740 63.158 0.00 0.00 0.00 6.13
843 1359 1.967535 CACTGTTCTGAGAGCCGGA 59.032 57.895 5.05 0.00 0.00 5.14
844 1360 0.534412 CACTGTTCTGAGAGCCGGAT 59.466 55.000 5.05 0.00 0.00 4.18
845 1361 1.066573 CACTGTTCTGAGAGCCGGATT 60.067 52.381 5.05 0.00 0.00 3.01
846 1362 1.625818 ACTGTTCTGAGAGCCGGATTT 59.374 47.619 5.05 0.00 0.00 2.17
847 1363 2.005451 CTGTTCTGAGAGCCGGATTTG 58.995 52.381 5.05 0.00 0.00 2.32
848 1364 1.339055 TGTTCTGAGAGCCGGATTTGG 60.339 52.381 5.05 0.00 0.00 3.28
849 1365 0.984230 TTCTGAGAGCCGGATTTGGT 59.016 50.000 5.05 0.00 0.00 3.67
850 1366 0.984230 TCTGAGAGCCGGATTTGGTT 59.016 50.000 5.05 0.00 0.00 3.67
851 1367 1.351017 TCTGAGAGCCGGATTTGGTTT 59.649 47.619 5.05 0.00 0.00 3.27
852 1368 2.162681 CTGAGAGCCGGATTTGGTTTT 58.837 47.619 5.05 0.00 0.00 2.43
853 1369 1.885887 TGAGAGCCGGATTTGGTTTTG 59.114 47.619 5.05 0.00 0.00 2.44
854 1370 1.886542 GAGAGCCGGATTTGGTTTTGT 59.113 47.619 5.05 0.00 0.00 2.83
855 1371 2.296190 GAGAGCCGGATTTGGTTTTGTT 59.704 45.455 5.05 0.00 0.00 2.83
856 1372 2.698274 AGAGCCGGATTTGGTTTTGTTT 59.302 40.909 5.05 0.00 0.00 2.83
857 1373 3.133901 AGAGCCGGATTTGGTTTTGTTTT 59.866 39.130 5.05 0.00 0.00 2.43
858 1374 4.342665 AGAGCCGGATTTGGTTTTGTTTTA 59.657 37.500 5.05 0.00 0.00 1.52
859 1375 4.627058 AGCCGGATTTGGTTTTGTTTTAG 58.373 39.130 5.05 0.00 0.00 1.85
860 1376 4.100344 AGCCGGATTTGGTTTTGTTTTAGT 59.900 37.500 5.05 0.00 0.00 2.24
861 1377 4.210328 GCCGGATTTGGTTTTGTTTTAGTG 59.790 41.667 5.05 0.00 0.00 2.74
862 1378 5.353111 CCGGATTTGGTTTTGTTTTAGTGT 58.647 37.500 0.00 0.00 0.00 3.55
863 1379 5.460748 CCGGATTTGGTTTTGTTTTAGTGTC 59.539 40.000 0.00 0.00 0.00 3.67
864 1380 5.460748 CGGATTTGGTTTTGTTTTAGTGTCC 59.539 40.000 0.00 0.00 0.00 4.02
865 1381 6.578944 GGATTTGGTTTTGTTTTAGTGTCCT 58.421 36.000 0.00 0.00 0.00 3.85
866 1382 6.478673 GGATTTGGTTTTGTTTTAGTGTCCTG 59.521 38.462 0.00 0.00 0.00 3.86
867 1383 4.993029 TGGTTTTGTTTTAGTGTCCTGG 57.007 40.909 0.00 0.00 0.00 4.45
868 1384 4.345854 TGGTTTTGTTTTAGTGTCCTGGT 58.654 39.130 0.00 0.00 0.00 4.00
869 1385 5.507637 TGGTTTTGTTTTAGTGTCCTGGTA 58.492 37.500 0.00 0.00 0.00 3.25
870 1386 5.591067 TGGTTTTGTTTTAGTGTCCTGGTAG 59.409 40.000 0.00 0.00 0.00 3.18
871 1387 5.824097 GGTTTTGTTTTAGTGTCCTGGTAGA 59.176 40.000 0.00 0.00 0.00 2.59
872 1388 6.489022 GGTTTTGTTTTAGTGTCCTGGTAGAT 59.511 38.462 0.00 0.00 0.00 1.98
873 1389 7.013942 GGTTTTGTTTTAGTGTCCTGGTAGATT 59.986 37.037 0.00 0.00 0.00 2.40
874 1390 7.504924 TTTGTTTTAGTGTCCTGGTAGATTG 57.495 36.000 0.00 0.00 0.00 2.67
875 1391 5.556915 TGTTTTAGTGTCCTGGTAGATTGG 58.443 41.667 0.00 0.00 0.00 3.16
876 1392 3.906720 TTAGTGTCCTGGTAGATTGGC 57.093 47.619 0.00 0.00 0.00 4.52
877 1393 1.656587 AGTGTCCTGGTAGATTGGCA 58.343 50.000 0.00 0.00 0.00 4.92
878 1394 1.556911 AGTGTCCTGGTAGATTGGCAG 59.443 52.381 0.00 0.00 0.00 4.85
879 1395 0.253044 TGTCCTGGTAGATTGGCAGC 59.747 55.000 0.00 0.00 0.00 5.25
880 1396 0.543749 GTCCTGGTAGATTGGCAGCT 59.456 55.000 0.00 0.00 0.00 4.24
881 1397 0.543277 TCCTGGTAGATTGGCAGCTG 59.457 55.000 10.11 10.11 0.00 4.24
882 1398 0.465097 CCTGGTAGATTGGCAGCTGG 60.465 60.000 17.12 0.00 0.00 4.85
883 1399 0.543277 CTGGTAGATTGGCAGCTGGA 59.457 55.000 17.12 0.00 0.00 3.86
884 1400 1.142465 CTGGTAGATTGGCAGCTGGAT 59.858 52.381 17.12 0.00 0.00 3.41
885 1401 1.565759 TGGTAGATTGGCAGCTGGATT 59.434 47.619 17.12 0.00 0.00 3.01
886 1402 2.025037 TGGTAGATTGGCAGCTGGATTT 60.025 45.455 17.12 0.00 0.00 2.17
887 1403 2.620585 GGTAGATTGGCAGCTGGATTTC 59.379 50.000 17.12 0.00 0.00 2.17
888 1404 1.772836 AGATTGGCAGCTGGATTTCC 58.227 50.000 17.12 8.16 0.00 3.13
889 1405 1.006281 AGATTGGCAGCTGGATTTCCA 59.994 47.619 17.12 10.98 45.30 3.53
890 1406 1.826720 GATTGGCAGCTGGATTTCCAA 59.173 47.619 20.56 20.56 46.97 3.53
891 1407 1.714541 TTGGCAGCTGGATTTCCAAA 58.285 45.000 17.12 2.50 46.97 3.28
892 1408 1.714541 TGGCAGCTGGATTTCCAAAA 58.285 45.000 17.12 0.00 46.97 2.44
893 1409 2.045524 TGGCAGCTGGATTTCCAAAAA 58.954 42.857 17.12 0.00 46.97 1.94
894 1410 2.638855 TGGCAGCTGGATTTCCAAAAAT 59.361 40.909 17.12 0.00 46.97 1.82
895 1411 3.264947 GGCAGCTGGATTTCCAAAAATC 58.735 45.455 17.12 2.92 46.97 2.17
906 1422 7.351414 GATTTCCAAAAATCAGTACCTTTGC 57.649 36.000 6.11 0.00 46.68 3.68
907 1423 4.497473 TCCAAAAATCAGTACCTTTGCG 57.503 40.909 0.00 0.00 0.00 4.85
908 1424 3.254657 TCCAAAAATCAGTACCTTTGCGG 59.745 43.478 0.00 0.00 39.35 5.69
909 1425 3.574614 CAAAAATCAGTACCTTTGCGGG 58.425 45.455 0.00 0.00 36.97 6.13
910 1426 1.834188 AAATCAGTACCTTTGCGGGG 58.166 50.000 0.00 0.00 36.97 5.73
911 1427 0.034477 AATCAGTACCTTTGCGGGGG 60.034 55.000 0.00 0.00 36.97 5.40
912 1428 0.912487 ATCAGTACCTTTGCGGGGGA 60.912 55.000 0.00 0.00 36.97 4.81
913 1429 1.376812 CAGTACCTTTGCGGGGGAC 60.377 63.158 0.00 0.00 37.93 4.46
914 1430 2.951101 AGTACCTTTGCGGGGGACG 61.951 63.158 0.00 0.00 42.27 4.79
924 1440 2.764547 GGGGGACGAGGGAAGAGG 60.765 72.222 0.00 0.00 0.00 3.69
925 1441 2.764547 GGGGACGAGGGAAGAGGG 60.765 72.222 0.00 0.00 0.00 4.30
926 1442 2.764547 GGGACGAGGGAAGAGGGG 60.765 72.222 0.00 0.00 0.00 4.79
927 1443 2.764547 GGACGAGGGAAGAGGGGG 60.765 72.222 0.00 0.00 0.00 5.40
928 1444 2.363361 GACGAGGGAAGAGGGGGA 59.637 66.667 0.00 0.00 0.00 4.81
929 1445 1.758906 GACGAGGGAAGAGGGGGAG 60.759 68.421 0.00 0.00 0.00 4.30
930 1446 2.444895 CGAGGGAAGAGGGGGAGG 60.445 72.222 0.00 0.00 0.00 4.30
931 1447 2.770475 GAGGGAAGAGGGGGAGGC 60.770 72.222 0.00 0.00 0.00 4.70
932 1448 3.296737 AGGGAAGAGGGGGAGGCT 61.297 66.667 0.00 0.00 0.00 4.58
933 1449 2.286502 GGGAAGAGGGGGAGGCTT 60.287 66.667 0.00 0.00 0.00 4.35
934 1450 2.684499 GGGAAGAGGGGGAGGCTTG 61.684 68.421 0.00 0.00 0.00 4.01
935 1451 1.925972 GGAAGAGGGGGAGGCTTGT 60.926 63.158 0.00 0.00 0.00 3.16
936 1452 1.501654 GGAAGAGGGGGAGGCTTGTT 61.502 60.000 0.00 0.00 0.00 2.83
937 1453 0.034960 GAAGAGGGGGAGGCTTGTTC 60.035 60.000 0.00 0.00 0.00 3.18
938 1454 1.501654 AAGAGGGGGAGGCTTGTTCC 61.502 60.000 0.00 0.00 0.00 3.62
942 1458 3.395630 GGGAGGCTTGTTCCCGTA 58.604 61.111 0.00 0.00 44.58 4.02
943 1459 1.681076 GGGAGGCTTGTTCCCGTAA 59.319 57.895 0.00 0.00 44.58 3.18
944 1460 0.675837 GGGAGGCTTGTTCCCGTAAC 60.676 60.000 0.00 0.00 44.58 2.50
945 1461 0.675837 GGAGGCTTGTTCCCGTAACC 60.676 60.000 0.00 0.00 37.27 2.85
976 1492 8.318412 TCTCTCATTTATTACTTGTTACTGGCA 58.682 33.333 0.00 0.00 0.00 4.92
993 1509 1.227764 CATGCAGGACATCCTCGGG 60.228 63.158 0.00 0.00 46.65 5.14
1000 1528 1.033746 GGACATCCTCGGGTACGTGA 61.034 60.000 0.00 0.00 41.85 4.35
1018 1546 0.810648 GATGTCGCAATTGGGCTTCA 59.189 50.000 17.19 15.01 0.00 3.02
1020 1548 1.035923 TGTCGCAATTGGGCTTCAAA 58.964 45.000 17.19 0.00 39.05 2.69
1030 1558 2.097036 TGGGCTTCAAAGATGAGCATG 58.903 47.619 0.00 0.00 36.78 4.06
1049 1585 0.250513 GCCGTCAAGAAGGTGGAGAT 59.749 55.000 4.05 0.00 32.29 2.75
1097 1633 0.673644 GGTCTTCACCATGGACACGG 60.674 60.000 21.47 4.50 43.17 4.94
1105 1641 0.034756 CCATGGACACGGTGTTCTGA 59.965 55.000 19.74 1.58 0.00 3.27
1106 1642 1.432514 CATGGACACGGTGTTCTGAG 58.567 55.000 19.74 6.60 0.00 3.35
1153 1690 7.050281 AGAATATTTTGTCAGAAACGTCGAG 57.950 36.000 0.00 0.00 0.00 4.04
1160 1697 1.674441 TCAGAAACGTCGAGAGTGTGT 59.326 47.619 0.00 0.00 0.00 3.72
1177 1724 1.881973 GTGTTGTGCCATCTGTCACAT 59.118 47.619 0.00 0.00 42.07 3.21
1211 1758 5.248870 ACAAGTTTGTGCTCAAGTTTAGG 57.751 39.130 0.98 0.00 40.49 2.69
1244 1792 3.197790 GCGCAGTGCCATGTCGAT 61.198 61.111 10.11 0.00 37.76 3.59
1301 1863 4.760530 TGTCTTTGATCTCAGTATGGGG 57.239 45.455 0.00 0.00 37.03 4.96
1303 1865 4.536090 TGTCTTTGATCTCAGTATGGGGTT 59.464 41.667 0.00 0.00 37.03 4.11
1305 1867 3.281727 TTGATCTCAGTATGGGGTTGC 57.718 47.619 0.00 0.00 37.03 4.17
1309 1876 2.124320 CAGTATGGGGTTGCGGGG 60.124 66.667 0.00 0.00 0.00 5.73
1357 1924 3.303189 GCAGTAGCTCTCCTGCCA 58.697 61.111 17.67 0.00 46.55 4.92
1362 1929 1.063341 AGTAGCTCTCCTGCCATCAGA 60.063 52.381 0.00 0.00 42.95 3.27
1416 1983 2.096496 GTCCCTTCGCATGATTTCTGTG 59.904 50.000 0.00 0.00 0.00 3.66
1475 2601 3.920231 TGAAGAGATATGCAGTGCCTT 57.080 42.857 13.72 7.22 0.00 4.35
1495 2621 0.391228 TGCTCGACTACACCTTTGCA 59.609 50.000 0.00 0.00 0.00 4.08
1503 2629 4.619394 CGACTACACCTTTGCAGATCTTCT 60.619 45.833 0.00 0.00 0.00 2.85
1533 2659 1.202940 GGAAGCCCTCCATATCCAACC 60.203 57.143 0.00 0.00 44.67 3.77
1555 2681 3.544684 TGCTGTTGATACCATGGTGATC 58.455 45.455 28.17 22.73 0.00 2.92
1583 2710 6.258230 TGTTGCTGAAATGGAAGTTGATAG 57.742 37.500 0.00 0.00 0.00 2.08
1620 2767 3.746492 AGTTGTTCGGTCTCTAAATGCAC 59.254 43.478 0.00 0.00 0.00 4.57
1651 2804 3.763360 CCTAGTTTCATTGTTGCCATCCA 59.237 43.478 0.00 0.00 0.00 3.41
1652 2805 4.403432 CCTAGTTTCATTGTTGCCATCCAT 59.597 41.667 0.00 0.00 0.00 3.41
1657 2810 1.137479 CATTGTTGCCATCCATCCCAC 59.863 52.381 0.00 0.00 0.00 4.61
1659 2812 0.323633 TGTTGCCATCCATCCCACAG 60.324 55.000 0.00 0.00 0.00 3.66
1720 2882 4.032960 TGGATTTGCAAGATGTACCAGT 57.967 40.909 0.00 0.00 0.00 4.00
1722 2884 4.941263 TGGATTTGCAAGATGTACCAGTAC 59.059 41.667 0.00 0.86 36.63 2.73
1731 2893 5.860941 AGATGTACCAGTACCTTCATCAG 57.139 43.478 5.53 0.00 35.56 2.90
1733 2895 5.721960 AGATGTACCAGTACCTTCATCAGTT 59.278 40.000 5.53 0.00 35.56 3.16
1738 2900 5.690865 ACCAGTACCTTCATCAGTTTGAAA 58.309 37.500 0.00 0.00 35.31 2.69
1744 2906 7.939039 AGTACCTTCATCAGTTTGAAATCTGAA 59.061 33.333 11.98 4.99 42.67 3.02
1749 2911 7.223260 TCATCAGTTTGAAATCTGAAGCATT 57.777 32.000 11.98 0.00 42.67 3.56
1753 2915 8.801715 TCAGTTTGAAATCTGAAGCATTTTAC 57.198 30.769 7.44 0.00 37.69 2.01
1756 2918 9.199982 AGTTTGAAATCTGAAGCATTTTACATG 57.800 29.630 0.00 0.00 0.00 3.21
1758 2920 6.632909 TGAAATCTGAAGCATTTTACATGGG 58.367 36.000 0.00 0.00 0.00 4.00
1760 2922 2.760092 TCTGAAGCATTTTACATGGGCC 59.240 45.455 0.00 0.00 0.00 5.80
1772 2934 2.707618 ATGGGCCCATGCATGTCCT 61.708 57.895 37.06 10.13 40.13 3.85
1774 2936 2.428925 GGGCCCATGCATGTCCTTG 61.429 63.158 24.58 9.25 40.13 3.61
1775 2937 1.683365 GGCCCATGCATGTCCTTGT 60.683 57.895 24.58 0.00 40.13 3.16
1786 2948 4.404073 TGCATGTCCTTGTAGTTTGGTTTT 59.596 37.500 0.00 0.00 0.00 2.43
1793 2955 5.128008 TCCTTGTAGTTTGGTTTTCCTTTGG 59.872 40.000 0.00 0.00 41.38 3.28
1811 2973 0.180642 GGGAGTTAGTTAGCCCCTGC 59.819 60.000 0.00 0.00 34.39 4.85
1883 3045 5.673514 TCATGCATTATCTAAGTGTGAGCA 58.326 37.500 0.00 0.00 0.00 4.26
1997 3161 1.089920 CGGGCTGGATTTTCAGAGTG 58.910 55.000 0.00 0.00 36.93 3.51
1999 3163 2.519013 GGGCTGGATTTTCAGAGTGTT 58.481 47.619 0.00 0.00 36.93 3.32
2040 3204 9.559958 CAATTGACCAGTTTAAACAGACATATC 57.440 33.333 20.06 8.07 0.00 1.63
2041 3205 6.961359 TGACCAGTTTAAACAGACATATCG 57.039 37.500 20.06 0.97 0.00 2.92
2043 3207 6.588756 TGACCAGTTTAAACAGACATATCGTC 59.411 38.462 20.06 12.33 45.77 4.20
2064 3228 7.861630 TCGTCTTTTTCAGAAATAAAGAGGTG 58.138 34.615 19.89 10.88 41.21 4.00
2172 3337 5.014808 GCAAAATGCTGGATATTTGACCT 57.985 39.130 15.37 0.00 40.96 3.85
2180 3349 4.390297 GCTGGATATTTGACCTATTCGCTC 59.610 45.833 0.00 0.00 0.00 5.03
2182 3351 3.927142 GGATATTTGACCTATTCGCTCCG 59.073 47.826 0.00 0.00 0.00 4.63
2210 3379 7.936847 ACAGTAACAAATCATCCTTACTTGTGA 59.063 33.333 0.00 0.00 30.90 3.58
2211 3380 8.783093 CAGTAACAAATCATCCTTACTTGTGAA 58.217 33.333 0.00 0.00 30.90 3.18
2212 3381 8.784043 AGTAACAAATCATCCTTACTTGTGAAC 58.216 33.333 0.00 0.00 30.90 3.18
2213 3382 7.823745 AACAAATCATCCTTACTTGTGAACT 57.176 32.000 0.00 0.00 30.90 3.01
2214 3383 8.918202 AACAAATCATCCTTACTTGTGAACTA 57.082 30.769 0.00 0.00 30.90 2.24
2215 3384 8.324163 ACAAATCATCCTTACTTGTGAACTAC 57.676 34.615 0.00 0.00 0.00 2.73
2216 3385 7.117812 ACAAATCATCCTTACTTGTGAACTACG 59.882 37.037 0.00 0.00 0.00 3.51
2310 3480 3.489180 TCGACTTTTCTCGATCAGGTC 57.511 47.619 0.00 0.00 37.76 3.85
2386 3556 2.114616 CCTGATCCCACTGCTAGACTT 58.885 52.381 0.00 0.00 0.00 3.01
2389 3559 4.346418 CCTGATCCCACTGCTAGACTTAAT 59.654 45.833 0.00 0.00 0.00 1.40
2390 3560 5.163258 CCTGATCCCACTGCTAGACTTAATT 60.163 44.000 0.00 0.00 0.00 1.40
2391 3561 6.313519 TGATCCCACTGCTAGACTTAATTT 57.686 37.500 0.00 0.00 0.00 1.82
2392 3562 6.721318 TGATCCCACTGCTAGACTTAATTTT 58.279 36.000 0.00 0.00 0.00 1.82
2393 3563 7.175104 TGATCCCACTGCTAGACTTAATTTTT 58.825 34.615 0.00 0.00 0.00 1.94
2418 3588 1.885049 AGCTGGATCACATGTAGGGT 58.115 50.000 0.00 0.00 0.00 4.34
2421 3591 2.105477 GCTGGATCACATGTAGGGTCAT 59.895 50.000 0.00 0.00 0.00 3.06
2437 3608 3.243670 GGGTCATCCGTAGCCTACTTTAC 60.244 52.174 0.00 0.00 33.83 2.01
2482 3653 8.141909 GGTCTTTAAACTTACCAAGCAAAGAAT 58.858 33.333 10.21 0.00 36.61 2.40
2483 3654 9.181805 GTCTTTAAACTTACCAAGCAAAGAATC 57.818 33.333 10.21 0.00 36.61 2.52
2511 3682 3.577415 TGATGACAGATGGATGGAGCTAG 59.423 47.826 0.00 0.00 0.00 3.42
2517 3688 3.256383 CAGATGGATGGAGCTAGAGACTG 59.744 52.174 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.454504 ACAAGACGAGCGATTATTTGGTTT 59.545 37.500 0.00 0.00 0.00 3.27
18 19 1.418373 TTGTCATGACAAGACGAGCG 58.582 50.000 32.36 0.00 45.42 5.03
72 73 8.790718 AGATGGATCACAAGCAAACATAATATC 58.209 33.333 0.00 0.00 0.00 1.63
104 106 7.309499 CCCATAATGGAGATCTACTACTCACAC 60.309 44.444 6.49 0.00 40.96 3.82
120 122 4.502036 TCCCTACATCTCCCATAATGGA 57.498 45.455 0.00 0.00 40.96 3.41
122 124 5.416952 GCAAATCCCTACATCTCCCATAATG 59.583 44.000 0.00 0.00 0.00 1.90
124 126 4.504864 CGCAAATCCCTACATCTCCCATAA 60.505 45.833 0.00 0.00 0.00 1.90
127 129 1.140852 CGCAAATCCCTACATCTCCCA 59.859 52.381 0.00 0.00 0.00 4.37
146 148 1.569493 CAGGCAAAACCACGTCTCG 59.431 57.895 0.00 0.00 43.14 4.04
151 153 1.898574 AGAGCCAGGCAAAACCACG 60.899 57.895 15.80 0.00 43.14 4.94
164 166 3.561310 TCACGCATAATCAAATCAGAGCC 59.439 43.478 0.00 0.00 0.00 4.70
165 167 4.801147 TCACGCATAATCAAATCAGAGC 57.199 40.909 0.00 0.00 0.00 4.09
168 170 8.908678 CCAAATAATCACGCATAATCAAATCAG 58.091 33.333 0.00 0.00 0.00 2.90
183 186 6.024552 TCAACCAAAGCTCCAAATAATCAC 57.975 37.500 0.00 0.00 0.00 3.06
215 218 6.247676 AGCAATGGATATACACCATGCATAA 58.752 36.000 19.07 0.00 45.89 1.90
218 221 4.103013 AGCAATGGATATACACCATGCA 57.897 40.909 19.07 0.00 45.89 3.96
248 251 2.297880 GTGTTGTCGGGGCCTTTAAATT 59.702 45.455 0.84 0.00 0.00 1.82
260 263 1.270625 ACCATGGTGTAGTGTTGTCGG 60.271 52.381 18.99 0.00 0.00 4.79
261 264 2.066262 GACCATGGTGTAGTGTTGTCG 58.934 52.381 25.52 0.00 0.00 4.35
264 267 2.559698 TGGACCATGGTGTAGTGTTG 57.440 50.000 25.52 0.00 0.00 3.33
267 270 5.943416 TCTAAATTTGGACCATGGTGTAGTG 59.057 40.000 25.52 3.43 0.00 2.74
283 286 4.757149 GCAGATATCGTGCCCTCTAAATTT 59.243 41.667 13.20 0.00 34.67 1.82
294 297 0.531974 TTTCCCGGCAGATATCGTGC 60.532 55.000 14.95 14.95 40.42 5.34
295 298 1.597663 GTTTTCCCGGCAGATATCGTG 59.402 52.381 0.00 0.00 0.00 4.35
296 299 1.485066 AGTTTTCCCGGCAGATATCGT 59.515 47.619 0.00 0.00 0.00 3.73
297 300 1.867233 CAGTTTTCCCGGCAGATATCG 59.133 52.381 0.00 0.00 0.00 2.92
298 301 2.222027 CCAGTTTTCCCGGCAGATATC 58.778 52.381 0.00 0.00 0.00 1.63
299 302 1.750682 GCCAGTTTTCCCGGCAGATAT 60.751 52.381 0.00 0.00 45.52 1.63
302 305 2.282180 GCCAGTTTTCCCGGCAGA 60.282 61.111 0.00 0.00 45.52 4.26
305 308 3.373565 CTGGCCAGTTTTCCCGGC 61.374 66.667 25.53 0.00 45.47 6.13
306 309 2.115266 ACTGGCCAGTTTTCCCGG 59.885 61.111 33.20 6.96 38.83 5.73
307 310 2.919494 GCACTGGCCAGTTTTCCCG 61.919 63.158 36.06 23.44 40.20 5.14
308 311 1.398958 TTGCACTGGCCAGTTTTCCC 61.399 55.000 36.06 20.27 40.20 3.97
309 312 0.032540 CTTGCACTGGCCAGTTTTCC 59.967 55.000 36.06 22.63 40.20 3.13
310 313 0.746659 ACTTGCACTGGCCAGTTTTC 59.253 50.000 36.06 25.51 42.87 2.29
312 315 1.447317 CGACTTGCACTGGCCAGTTT 61.447 55.000 36.06 17.20 45.18 2.66
313 316 1.893808 CGACTTGCACTGGCCAGTT 60.894 57.895 36.06 21.53 45.18 3.16
315 318 1.364626 GATCGACTTGCACTGGCCAG 61.365 60.000 31.60 31.60 40.13 4.85
316 319 1.375908 GATCGACTTGCACTGGCCA 60.376 57.895 4.71 4.71 40.13 5.36
317 320 0.175760 TAGATCGACTTGCACTGGCC 59.824 55.000 0.00 0.00 40.13 5.36
318 321 2.010145 TTAGATCGACTTGCACTGGC 57.990 50.000 0.00 0.00 41.68 4.85
319 322 3.123621 GTGTTTAGATCGACTTGCACTGG 59.876 47.826 0.00 0.00 0.00 4.00
320 323 3.740832 TGTGTTTAGATCGACTTGCACTG 59.259 43.478 0.00 0.00 0.00 3.66
321 324 3.990092 TGTGTTTAGATCGACTTGCACT 58.010 40.909 0.00 0.00 0.00 4.40
322 325 4.725556 TTGTGTTTAGATCGACTTGCAC 57.274 40.909 0.00 0.00 0.00 4.57
324 327 8.015658 AGTAAAATTGTGTTTAGATCGACTTGC 58.984 33.333 0.00 0.00 0.00 4.01
327 330 9.701098 TGTAGTAAAATTGTGTTTAGATCGACT 57.299 29.630 0.00 0.00 0.00 4.18
329 332 9.701098 ACTGTAGTAAAATTGTGTTTAGATCGA 57.299 29.630 0.00 0.00 0.00 3.59
368 874 9.675464 CAATCTTAACTACCCCAAAATACTGTA 57.325 33.333 0.00 0.00 0.00 2.74
369 875 7.614192 CCAATCTTAACTACCCCAAAATACTGT 59.386 37.037 0.00 0.00 0.00 3.55
370 876 7.068226 CCCAATCTTAACTACCCCAAAATACTG 59.932 40.741 0.00 0.00 0.00 2.74
371 877 7.036425 TCCCAATCTTAACTACCCCAAAATACT 60.036 37.037 0.00 0.00 0.00 2.12
372 878 7.120716 TCCCAATCTTAACTACCCCAAAATAC 58.879 38.462 0.00 0.00 0.00 1.89
373 879 7.286667 TCCCAATCTTAACTACCCCAAAATA 57.713 36.000 0.00 0.00 0.00 1.40
374 880 6.160483 TCCCAATCTTAACTACCCCAAAAT 57.840 37.500 0.00 0.00 0.00 1.82
375 881 5.602291 TCCCAATCTTAACTACCCCAAAA 57.398 39.130 0.00 0.00 0.00 2.44
376 882 5.340528 GGATCCCAATCTTAACTACCCCAAA 60.341 44.000 0.00 0.00 32.12 3.28
377 883 4.167307 GGATCCCAATCTTAACTACCCCAA 59.833 45.833 0.00 0.00 32.12 4.12
378 884 3.720002 GGATCCCAATCTTAACTACCCCA 59.280 47.826 0.00 0.00 32.12 4.96
379 885 3.981375 AGGATCCCAATCTTAACTACCCC 59.019 47.826 8.55 0.00 32.12 4.95
380 886 4.908481 AGAGGATCCCAATCTTAACTACCC 59.092 45.833 8.55 0.00 33.66 3.69
381 887 6.502074 AAGAGGATCCCAATCTTAACTACC 57.498 41.667 8.55 0.00 33.66 3.18
382 888 7.829706 ACAAAAGAGGATCCCAATCTTAACTAC 59.170 37.037 13.55 0.00 33.05 2.73
383 889 7.928873 ACAAAAGAGGATCCCAATCTTAACTA 58.071 34.615 13.55 0.00 33.05 2.24
384 890 6.794534 ACAAAAGAGGATCCCAATCTTAACT 58.205 36.000 13.55 0.00 33.05 2.24
385 891 7.201741 GCTACAAAAGAGGATCCCAATCTTAAC 60.202 40.741 13.55 0.16 33.05 2.01
386 892 6.828785 GCTACAAAAGAGGATCCCAATCTTAA 59.171 38.462 13.55 2.37 33.05 1.85
389 895 4.684485 CGCTACAAAAGAGGATCCCAATCT 60.684 45.833 8.55 1.57 33.66 2.40
404 910 2.536761 AACAGCAGTACCGCTACAAA 57.463 45.000 2.60 0.00 41.38 2.83
408 914 0.452987 CCGTAACAGCAGTACCGCTA 59.547 55.000 2.60 0.00 41.38 4.26
412 918 1.808390 CGGCCGTAACAGCAGTACC 60.808 63.158 19.50 0.00 0.00 3.34
416 922 2.813908 GACCGGCCGTAACAGCAG 60.814 66.667 26.12 8.44 0.00 4.24
458 964 0.992072 CCACACTTAGCGATGACACG 59.008 55.000 0.00 0.00 0.00 4.49
461 967 2.205074 CATCCCACACTTAGCGATGAC 58.795 52.381 0.00 0.00 33.66 3.06
466 972 2.811431 TCAAAACATCCCACACTTAGCG 59.189 45.455 0.00 0.00 0.00 4.26
467 973 3.366374 GCTCAAAACATCCCACACTTAGC 60.366 47.826 0.00 0.00 0.00 3.09
468 974 4.074970 AGCTCAAAACATCCCACACTTAG 58.925 43.478 0.00 0.00 0.00 2.18
469 975 4.098914 AGCTCAAAACATCCCACACTTA 57.901 40.909 0.00 0.00 0.00 2.24
470 976 2.949447 AGCTCAAAACATCCCACACTT 58.051 42.857 0.00 0.00 0.00 3.16
476 984 2.627699 TGTCCAAAGCTCAAAACATCCC 59.372 45.455 0.00 0.00 0.00 3.85
479 987 3.259123 GGGATGTCCAAAGCTCAAAACAT 59.741 43.478 0.86 4.89 37.91 2.71
487 995 3.965888 GACAGGGATGTCCAAAGCT 57.034 52.632 0.86 0.00 38.24 3.74
496 1004 1.257743 ATATCCGACGGACAGGGATG 58.742 55.000 21.02 0.00 40.65 3.51
514 1022 3.581101 TCTCATCTTCCCTCCGATCAAT 58.419 45.455 0.00 0.00 0.00 2.57
516 1024 2.755952 TCTCATCTTCCCTCCGATCA 57.244 50.000 0.00 0.00 0.00 2.92
517 1025 2.298729 CCTTCTCATCTTCCCTCCGATC 59.701 54.545 0.00 0.00 0.00 3.69
521 1029 1.765904 GACCCTTCTCATCTTCCCTCC 59.234 57.143 0.00 0.00 0.00 4.30
523 1031 2.476199 CTGACCCTTCTCATCTTCCCT 58.524 52.381 0.00 0.00 0.00 4.20
524 1032 1.488393 CCTGACCCTTCTCATCTTCCC 59.512 57.143 0.00 0.00 0.00 3.97
528 1036 2.761208 CGTTACCTGACCCTTCTCATCT 59.239 50.000 0.00 0.00 0.00 2.90
529 1037 2.159085 CCGTTACCTGACCCTTCTCATC 60.159 54.545 0.00 0.00 0.00 2.92
530 1038 1.831736 CCGTTACCTGACCCTTCTCAT 59.168 52.381 0.00 0.00 0.00 2.90
531 1039 1.263356 CCGTTACCTGACCCTTCTCA 58.737 55.000 0.00 0.00 0.00 3.27
532 1040 1.067071 CACCGTTACCTGACCCTTCTC 60.067 57.143 0.00 0.00 0.00 2.87
534 1042 0.971386 TCACCGTTACCTGACCCTTC 59.029 55.000 0.00 0.00 0.00 3.46
535 1043 0.974383 CTCACCGTTACCTGACCCTT 59.026 55.000 0.00 0.00 0.00 3.95
536 1044 0.903454 CCTCACCGTTACCTGACCCT 60.903 60.000 0.00 0.00 0.00 4.34
537 1045 1.190178 ACCTCACCGTTACCTGACCC 61.190 60.000 0.00 0.00 0.00 4.46
538 1046 0.037605 CACCTCACCGTTACCTGACC 60.038 60.000 0.00 0.00 0.00 4.02
539 1047 0.963962 TCACCTCACCGTTACCTGAC 59.036 55.000 0.00 0.00 0.00 3.51
540 1048 1.254026 CTCACCTCACCGTTACCTGA 58.746 55.000 0.00 0.00 0.00 3.86
541 1049 0.966920 ACTCACCTCACCGTTACCTG 59.033 55.000 0.00 0.00 0.00 4.00
542 1050 1.713297 AACTCACCTCACCGTTACCT 58.287 50.000 0.00 0.00 0.00 3.08
543 1051 2.951726 GTAACTCACCTCACCGTTACC 58.048 52.381 0.00 0.00 37.05 2.85
555 1063 2.297033 TCGGTGGTAAGTGGTAACTCAC 59.703 50.000 0.00 0.00 34.77 3.51
556 1064 2.559668 CTCGGTGGTAAGTGGTAACTCA 59.440 50.000 0.00 0.00 34.77 3.41
557 1065 2.560105 ACTCGGTGGTAAGTGGTAACTC 59.440 50.000 0.00 0.00 34.77 3.01
558 1066 2.601905 ACTCGGTGGTAAGTGGTAACT 58.398 47.619 0.00 0.00 38.71 2.24
559 1067 4.400567 AGATACTCGGTGGTAAGTGGTAAC 59.599 45.833 0.00 0.00 0.00 2.50
560 1068 4.603131 AGATACTCGGTGGTAAGTGGTAA 58.397 43.478 0.00 0.00 0.00 2.85
561 1069 4.202441 GAGATACTCGGTGGTAAGTGGTA 58.798 47.826 0.00 0.00 0.00 3.25
562 1070 3.022406 GAGATACTCGGTGGTAAGTGGT 58.978 50.000 0.00 0.00 0.00 4.16
563 1071 2.361438 GGAGATACTCGGTGGTAAGTGG 59.639 54.545 0.00 0.00 0.00 4.00
564 1072 2.361438 GGGAGATACTCGGTGGTAAGTG 59.639 54.545 0.00 0.00 0.00 3.16
565 1073 2.024655 TGGGAGATACTCGGTGGTAAGT 60.025 50.000 0.00 0.00 0.00 2.24
566 1074 2.623889 CTGGGAGATACTCGGTGGTAAG 59.376 54.545 0.00 0.00 0.00 2.34
574 1082 1.323412 CCTGGACTGGGAGATACTCG 58.677 60.000 0.00 0.00 0.00 4.18
575 1083 1.044611 GCCTGGACTGGGAGATACTC 58.955 60.000 0.00 0.00 0.00 2.59
601 1109 2.988966 TCGTCGACGAGGATGAATCCG 61.989 57.143 34.97 6.73 44.22 4.18
618 1126 3.677648 CACCGTTCTCCCCGTCGT 61.678 66.667 0.00 0.00 0.00 4.34
622 1130 1.141881 CAGATCACCGTTCTCCCCG 59.858 63.158 0.00 0.00 0.00 5.73
624 1132 0.175989 GTCCAGATCACCGTTCTCCC 59.824 60.000 0.00 0.00 0.00 4.30
631 1139 1.517832 GGGACAGTCCAGATCACCG 59.482 63.158 21.75 0.00 38.64 4.94
636 1144 0.629596 TCCTACGGGACAGTCCAGAT 59.370 55.000 25.01 12.21 38.64 2.90
652 1167 2.758737 CGGCTTACCTCCGGTCCT 60.759 66.667 0.00 0.00 42.99 3.85
654 1169 1.153686 GTTCGGCTTACCTCCGGTC 60.154 63.158 0.00 0.00 46.43 4.79
656 1171 2.186125 GGTTCGGCTTACCTCCGG 59.814 66.667 0.00 0.00 46.43 5.14
676 1191 0.395036 TGGAGAAGAGAGAGAGGCGG 60.395 60.000 0.00 0.00 0.00 6.13
680 1195 2.682856 CGGAGTTGGAGAAGAGAGAGAG 59.317 54.545 0.00 0.00 0.00 3.20
683 1198 1.840737 CCGGAGTTGGAGAAGAGAGA 58.159 55.000 0.00 0.00 0.00 3.10
693 1209 2.494918 CTACGGAGCCGGAGTTGG 59.505 66.667 12.98 0.00 44.71 3.77
725 1241 2.759973 TAGGGCTCCGGCAGAGTG 60.760 66.667 0.00 0.00 45.21 3.51
729 1245 3.230245 CTCCTAGGGCTCCGGCAG 61.230 72.222 9.46 0.00 40.87 4.85
731 1247 1.839296 AATCTCCTAGGGCTCCGGC 60.839 63.158 9.46 0.00 37.82 6.13
733 1249 1.123928 AACAATCTCCTAGGGCTCCG 58.876 55.000 9.46 0.00 0.00 4.63
734 1250 3.546724 GAAAACAATCTCCTAGGGCTCC 58.453 50.000 9.46 0.00 0.00 4.70
735 1251 3.546724 GGAAAACAATCTCCTAGGGCTC 58.453 50.000 9.46 0.00 0.00 4.70
736 1252 2.092914 CGGAAAACAATCTCCTAGGGCT 60.093 50.000 9.46 0.00 0.00 5.19
737 1253 2.289565 CGGAAAACAATCTCCTAGGGC 58.710 52.381 9.46 0.00 0.00 5.19
738 1254 2.919228 CCGGAAAACAATCTCCTAGGG 58.081 52.381 9.46 0.00 0.00 3.53
739 1255 2.289565 GCCGGAAAACAATCTCCTAGG 58.710 52.381 5.05 0.82 0.00 3.02
740 1256 2.985896 TGCCGGAAAACAATCTCCTAG 58.014 47.619 5.05 0.00 0.00 3.02
742 1258 2.514458 ATGCCGGAAAACAATCTCCT 57.486 45.000 5.05 0.00 0.00 3.69
743 1259 4.918810 ATAATGCCGGAAAACAATCTCC 57.081 40.909 5.05 0.00 0.00 3.71
744 1260 6.861065 TCTATAATGCCGGAAAACAATCTC 57.139 37.500 5.05 0.00 0.00 2.75
750 1266 5.305585 TCTGGATCTATAATGCCGGAAAAC 58.694 41.667 5.05 0.00 33.07 2.43
751 1267 5.551233 CTCTGGATCTATAATGCCGGAAAA 58.449 41.667 5.05 0.00 35.51 2.29
752 1268 4.563580 GCTCTGGATCTATAATGCCGGAAA 60.564 45.833 5.05 0.00 35.51 3.13
753 1269 3.055819 GCTCTGGATCTATAATGCCGGAA 60.056 47.826 5.05 0.00 35.51 4.30
754 1270 2.497675 GCTCTGGATCTATAATGCCGGA 59.502 50.000 5.05 0.00 34.75 5.14
755 1271 2.234661 TGCTCTGGATCTATAATGCCGG 59.765 50.000 0.00 0.00 0.00 6.13
756 1272 3.599730 TGCTCTGGATCTATAATGCCG 57.400 47.619 0.00 0.00 0.00 5.69
759 1275 8.675504 GGATTTGATTGCTCTGGATCTATAATG 58.324 37.037 0.00 0.00 0.00 1.90
760 1276 7.551974 CGGATTTGATTGCTCTGGATCTATAAT 59.448 37.037 0.00 0.00 0.00 1.28
761 1277 6.875726 CGGATTTGATTGCTCTGGATCTATAA 59.124 38.462 0.00 0.00 0.00 0.98
762 1278 6.401394 CGGATTTGATTGCTCTGGATCTATA 58.599 40.000 0.00 0.00 0.00 1.31
763 1279 5.243981 CGGATTTGATTGCTCTGGATCTAT 58.756 41.667 0.00 0.00 0.00 1.98
764 1280 4.635223 CGGATTTGATTGCTCTGGATCTA 58.365 43.478 0.00 0.00 0.00 1.98
765 1281 3.474600 CGGATTTGATTGCTCTGGATCT 58.525 45.455 0.00 0.00 0.00 2.75
766 1282 2.031333 GCGGATTTGATTGCTCTGGATC 60.031 50.000 0.00 0.00 0.00 3.36
768 1284 1.382522 GCGGATTTGATTGCTCTGGA 58.617 50.000 0.00 0.00 0.00 3.86
770 1286 0.383231 GGGCGGATTTGATTGCTCTG 59.617 55.000 0.00 0.00 0.00 3.35
771 1287 0.257039 AGGGCGGATTTGATTGCTCT 59.743 50.000 0.00 0.00 32.10 4.09
772 1288 1.604278 GTAGGGCGGATTTGATTGCTC 59.396 52.381 0.00 0.00 0.00 4.26
773 1289 1.064758 TGTAGGGCGGATTTGATTGCT 60.065 47.619 0.00 0.00 0.00 3.91
774 1290 1.334869 CTGTAGGGCGGATTTGATTGC 59.665 52.381 0.00 0.00 0.00 3.56
777 1293 2.421529 GGAACTGTAGGGCGGATTTGAT 60.422 50.000 0.00 0.00 0.00 2.57
778 1294 1.065709 GGAACTGTAGGGCGGATTTGA 60.066 52.381 0.00 0.00 0.00 2.69
779 1295 1.065418 AGGAACTGTAGGGCGGATTTG 60.065 52.381 0.00 0.00 37.18 2.32
780 1296 1.286248 AGGAACTGTAGGGCGGATTT 58.714 50.000 0.00 0.00 37.18 2.17
781 1297 1.286248 AAGGAACTGTAGGGCGGATT 58.714 50.000 0.00 0.00 40.86 3.01
783 1299 0.611714 GAAAGGAACTGTAGGGCGGA 59.388 55.000 0.00 0.00 40.86 5.54
784 1300 0.392595 GGAAAGGAACTGTAGGGCGG 60.393 60.000 0.00 0.00 40.86 6.13
785 1301 0.739813 CGGAAAGGAACTGTAGGGCG 60.740 60.000 0.00 0.00 40.86 6.13
786 1302 0.611714 TCGGAAAGGAACTGTAGGGC 59.388 55.000 0.00 0.00 40.86 5.19
787 1303 2.176889 TCTCGGAAAGGAACTGTAGGG 58.823 52.381 0.00 0.00 40.86 3.53
788 1304 5.593679 TTATCTCGGAAAGGAACTGTAGG 57.406 43.478 0.00 0.00 40.86 3.18
789 1305 6.920758 CAGATTATCTCGGAAAGGAACTGTAG 59.079 42.308 0.00 0.00 40.86 2.74
790 1306 6.605995 TCAGATTATCTCGGAAAGGAACTGTA 59.394 38.462 0.00 0.00 40.86 2.74
791 1307 5.422331 TCAGATTATCTCGGAAAGGAACTGT 59.578 40.000 0.00 0.00 40.86 3.55
792 1308 5.907207 TCAGATTATCTCGGAAAGGAACTG 58.093 41.667 0.00 0.00 40.86 3.16
793 1309 6.239458 GGATCAGATTATCTCGGAAAGGAACT 60.239 42.308 0.00 0.00 31.84 3.01
794 1310 5.929415 GGATCAGATTATCTCGGAAAGGAAC 59.071 44.000 0.00 0.00 31.60 3.62
796 1312 5.147767 TGGATCAGATTATCTCGGAAAGGA 58.852 41.667 0.00 0.00 31.60 3.36
797 1313 5.474578 TGGATCAGATTATCTCGGAAAGG 57.525 43.478 0.00 0.00 31.60 3.11
798 1314 6.128336 GCATTGGATCAGATTATCTCGGAAAG 60.128 42.308 0.00 0.00 31.60 2.62
799 1315 5.702670 GCATTGGATCAGATTATCTCGGAAA 59.297 40.000 0.00 0.00 31.60 3.13
800 1316 5.240891 GCATTGGATCAGATTATCTCGGAA 58.759 41.667 0.00 0.00 31.60 4.30
802 1318 3.615937 CGCATTGGATCAGATTATCTCGG 59.384 47.826 0.00 0.00 0.00 4.63
803 1319 3.061831 GCGCATTGGATCAGATTATCTCG 59.938 47.826 0.30 0.00 0.00 4.04
804 1320 3.999001 TGCGCATTGGATCAGATTATCTC 59.001 43.478 5.66 0.00 0.00 2.75
805 1321 3.750130 GTGCGCATTGGATCAGATTATCT 59.250 43.478 15.91 0.00 0.00 1.98
806 1322 3.750130 AGTGCGCATTGGATCAGATTATC 59.250 43.478 15.91 0.00 0.00 1.75
807 1323 3.501062 CAGTGCGCATTGGATCAGATTAT 59.499 43.478 23.85 0.00 0.00 1.28
808 1324 2.874086 CAGTGCGCATTGGATCAGATTA 59.126 45.455 23.85 0.00 0.00 1.75
809 1325 1.674441 CAGTGCGCATTGGATCAGATT 59.326 47.619 23.85 0.00 0.00 2.40
810 1326 1.306148 CAGTGCGCATTGGATCAGAT 58.694 50.000 23.85 0.00 0.00 2.90
812 1328 0.806868 AACAGTGCGCATTGGATCAG 59.193 50.000 32.39 10.63 0.00 2.90
813 1329 0.804364 GAACAGTGCGCATTGGATCA 59.196 50.000 32.39 0.00 0.00 2.92
814 1330 1.089920 AGAACAGTGCGCATTGGATC 58.910 50.000 32.39 27.69 0.00 3.36
815 1331 0.806868 CAGAACAGTGCGCATTGGAT 59.193 50.000 32.39 22.34 0.00 3.41
816 1332 0.250252 TCAGAACAGTGCGCATTGGA 60.250 50.000 32.39 19.09 0.00 3.53
817 1333 0.167470 CTCAGAACAGTGCGCATTGG 59.833 55.000 32.39 18.97 0.00 3.16
819 1335 1.436600 CTCTCAGAACAGTGCGCATT 58.563 50.000 15.91 6.43 0.00 3.56
820 1336 1.018226 GCTCTCAGAACAGTGCGCAT 61.018 55.000 15.91 0.00 0.00 4.73
821 1337 1.665916 GCTCTCAGAACAGTGCGCA 60.666 57.895 5.66 5.66 0.00 6.09
822 1338 2.386660 GGCTCTCAGAACAGTGCGC 61.387 63.158 0.00 0.00 34.34 6.09
823 1339 2.091112 CGGCTCTCAGAACAGTGCG 61.091 63.158 0.00 0.00 34.34 5.34
824 1340 1.739562 CCGGCTCTCAGAACAGTGC 60.740 63.158 0.00 0.00 33.03 4.40
825 1341 0.534412 ATCCGGCTCTCAGAACAGTG 59.466 55.000 0.00 0.00 0.00 3.66
826 1342 1.270907 AATCCGGCTCTCAGAACAGT 58.729 50.000 0.00 0.00 0.00 3.55
827 1343 2.005451 CAAATCCGGCTCTCAGAACAG 58.995 52.381 0.00 0.00 0.00 3.16
828 1344 1.339055 CCAAATCCGGCTCTCAGAACA 60.339 52.381 0.00 0.00 0.00 3.18
829 1345 1.339151 ACCAAATCCGGCTCTCAGAAC 60.339 52.381 0.00 0.00 0.00 3.01
830 1346 0.984230 ACCAAATCCGGCTCTCAGAA 59.016 50.000 0.00 0.00 0.00 3.02
831 1347 0.984230 AACCAAATCCGGCTCTCAGA 59.016 50.000 0.00 0.00 0.00 3.27
832 1348 1.826385 AAACCAAATCCGGCTCTCAG 58.174 50.000 0.00 0.00 0.00 3.35
833 1349 1.885887 CAAAACCAAATCCGGCTCTCA 59.114 47.619 0.00 0.00 0.00 3.27
834 1350 1.886542 ACAAAACCAAATCCGGCTCTC 59.113 47.619 0.00 0.00 0.00 3.20
835 1351 1.995376 ACAAAACCAAATCCGGCTCT 58.005 45.000 0.00 0.00 0.00 4.09
836 1352 2.812358 AACAAAACCAAATCCGGCTC 57.188 45.000 0.00 0.00 0.00 4.70
837 1353 3.552132 AAAACAAAACCAAATCCGGCT 57.448 38.095 0.00 0.00 0.00 5.52
838 1354 4.210328 CACTAAAACAAAACCAAATCCGGC 59.790 41.667 0.00 0.00 0.00 6.13
839 1355 5.353111 ACACTAAAACAAAACCAAATCCGG 58.647 37.500 0.00 0.00 0.00 5.14
840 1356 5.460748 GGACACTAAAACAAAACCAAATCCG 59.539 40.000 0.00 0.00 0.00 4.18
841 1357 6.478673 CAGGACACTAAAACAAAACCAAATCC 59.521 38.462 0.00 0.00 0.00 3.01
842 1358 6.478673 CCAGGACACTAAAACAAAACCAAATC 59.521 38.462 0.00 0.00 0.00 2.17
843 1359 6.070481 ACCAGGACACTAAAACAAAACCAAAT 60.070 34.615 0.00 0.00 0.00 2.32
844 1360 5.246429 ACCAGGACACTAAAACAAAACCAAA 59.754 36.000 0.00 0.00 0.00 3.28
845 1361 4.773149 ACCAGGACACTAAAACAAAACCAA 59.227 37.500 0.00 0.00 0.00 3.67
846 1362 4.345854 ACCAGGACACTAAAACAAAACCA 58.654 39.130 0.00 0.00 0.00 3.67
847 1363 4.994907 ACCAGGACACTAAAACAAAACC 57.005 40.909 0.00 0.00 0.00 3.27
848 1364 6.930667 TCTACCAGGACACTAAAACAAAAC 57.069 37.500 0.00 0.00 0.00 2.43
849 1365 7.013846 CCAATCTACCAGGACACTAAAACAAAA 59.986 37.037 0.00 0.00 0.00 2.44
850 1366 6.488683 CCAATCTACCAGGACACTAAAACAAA 59.511 38.462 0.00 0.00 0.00 2.83
851 1367 6.001460 CCAATCTACCAGGACACTAAAACAA 58.999 40.000 0.00 0.00 0.00 2.83
852 1368 5.556915 CCAATCTACCAGGACACTAAAACA 58.443 41.667 0.00 0.00 0.00 2.83
853 1369 4.395231 GCCAATCTACCAGGACACTAAAAC 59.605 45.833 0.00 0.00 0.00 2.43
854 1370 4.042311 TGCCAATCTACCAGGACACTAAAA 59.958 41.667 0.00 0.00 0.00 1.52
855 1371 3.585289 TGCCAATCTACCAGGACACTAAA 59.415 43.478 0.00 0.00 0.00 1.85
856 1372 3.178046 TGCCAATCTACCAGGACACTAA 58.822 45.455 0.00 0.00 0.00 2.24
857 1373 2.766263 CTGCCAATCTACCAGGACACTA 59.234 50.000 0.00 0.00 0.00 2.74
858 1374 1.556911 CTGCCAATCTACCAGGACACT 59.443 52.381 0.00 0.00 0.00 3.55
859 1375 2.014068 GCTGCCAATCTACCAGGACAC 61.014 57.143 0.00 0.00 0.00 3.67
860 1376 0.253044 GCTGCCAATCTACCAGGACA 59.747 55.000 0.00 0.00 0.00 4.02
861 1377 0.543749 AGCTGCCAATCTACCAGGAC 59.456 55.000 0.00 0.00 0.00 3.85
862 1378 0.543277 CAGCTGCCAATCTACCAGGA 59.457 55.000 0.00 0.00 0.00 3.86
863 1379 0.465097 CCAGCTGCCAATCTACCAGG 60.465 60.000 8.66 0.00 0.00 4.45
864 1380 0.543277 TCCAGCTGCCAATCTACCAG 59.457 55.000 8.66 0.00 0.00 4.00
865 1381 1.216064 ATCCAGCTGCCAATCTACCA 58.784 50.000 8.66 0.00 0.00 3.25
866 1382 2.355010 AATCCAGCTGCCAATCTACC 57.645 50.000 8.66 0.00 0.00 3.18
867 1383 2.620585 GGAAATCCAGCTGCCAATCTAC 59.379 50.000 8.66 0.00 35.64 2.59
868 1384 2.241941 TGGAAATCCAGCTGCCAATCTA 59.758 45.455 8.66 0.00 42.01 1.98
869 1385 1.006281 TGGAAATCCAGCTGCCAATCT 59.994 47.619 8.66 0.00 42.01 2.40
870 1386 1.477553 TGGAAATCCAGCTGCCAATC 58.522 50.000 8.66 3.75 42.01 2.67
871 1387 3.695803 TGGAAATCCAGCTGCCAAT 57.304 47.368 8.66 0.00 42.01 3.16
876 1392 8.928542 AGGTACTGATTTTTGGAAATCCAGCTG 61.929 40.741 6.78 6.78 46.87 4.24
877 1393 6.977687 AGGTACTGATTTTTGGAAATCCAGCT 60.978 38.462 1.86 6.71 46.87 4.24
878 1394 5.185828 AGGTACTGATTTTTGGAAATCCAGC 59.814 40.000 1.86 5.06 46.87 4.85
879 1395 6.840780 AGGTACTGATTTTTGGAAATCCAG 57.159 37.500 1.86 8.60 46.87 3.86
880 1396 7.441017 CAAAGGTACTGATTTTTGGAAATCCA 58.559 34.615 0.00 0.00 46.87 3.41
881 1397 6.368791 GCAAAGGTACTGATTTTTGGAAATCC 59.631 38.462 8.82 0.00 46.87 3.01
882 1398 8.732072 CCGCAAAGGTACTGATTTTTGGAAATC 61.732 40.741 5.21 5.21 40.63 2.17
883 1399 5.925969 CGCAAAGGTACTGATTTTTGGAAAT 59.074 36.000 0.00 0.00 40.86 2.17
884 1400 5.285651 CGCAAAGGTACTGATTTTTGGAAA 58.714 37.500 0.00 0.00 40.86 3.13
885 1401 4.261825 CCGCAAAGGTACTGATTTTTGGAA 60.262 41.667 0.00 0.00 40.86 3.53
886 1402 3.254657 CCGCAAAGGTACTGATTTTTGGA 59.745 43.478 0.00 0.00 40.86 3.53
887 1403 3.574614 CCGCAAAGGTACTGATTTTTGG 58.425 45.455 0.00 0.00 40.86 3.28
888 1404 3.574614 CCCGCAAAGGTACTGATTTTTG 58.425 45.455 0.00 0.00 40.86 2.44
889 1405 2.560981 CCCCGCAAAGGTACTGATTTTT 59.439 45.455 0.00 0.00 40.86 1.94
890 1406 2.167662 CCCCGCAAAGGTACTGATTTT 58.832 47.619 0.00 0.00 40.86 1.82
891 1407 1.615919 CCCCCGCAAAGGTACTGATTT 60.616 52.381 0.00 0.00 40.86 2.17
892 1408 0.034477 CCCCCGCAAAGGTACTGATT 60.034 55.000 0.00 0.00 40.86 2.57
893 1409 0.912487 TCCCCCGCAAAGGTACTGAT 60.912 55.000 0.00 0.00 40.86 2.90
894 1410 1.536907 TCCCCCGCAAAGGTACTGA 60.537 57.895 0.00 0.00 40.86 3.41
895 1411 1.376812 GTCCCCCGCAAAGGTACTG 60.377 63.158 0.00 0.00 40.86 2.74
897 1413 2.435410 CGTCCCCCGCAAAGGTAC 60.435 66.667 0.00 0.00 38.74 3.34
898 1414 2.604079 TCGTCCCCCGCAAAGGTA 60.604 61.111 0.00 0.00 38.74 3.08
899 1415 4.016706 CTCGTCCCCCGCAAAGGT 62.017 66.667 0.00 0.00 38.74 3.50
900 1416 4.778143 CCTCGTCCCCCGCAAAGG 62.778 72.222 0.00 0.00 40.63 3.11
901 1417 4.778143 CCCTCGTCCCCCGCAAAG 62.778 72.222 0.00 0.00 36.19 2.77
906 1422 3.148279 CTCTTCCCTCGTCCCCCG 61.148 72.222 0.00 0.00 38.13 5.73
907 1423 2.764547 CCTCTTCCCTCGTCCCCC 60.765 72.222 0.00 0.00 0.00 5.40
908 1424 2.764547 CCCTCTTCCCTCGTCCCC 60.765 72.222 0.00 0.00 0.00 4.81
909 1425 2.764547 CCCCTCTTCCCTCGTCCC 60.765 72.222 0.00 0.00 0.00 4.46
910 1426 2.764547 CCCCCTCTTCCCTCGTCC 60.765 72.222 0.00 0.00 0.00 4.79
911 1427 1.758906 CTCCCCCTCTTCCCTCGTC 60.759 68.421 0.00 0.00 0.00 4.20
912 1428 2.364961 CTCCCCCTCTTCCCTCGT 59.635 66.667 0.00 0.00 0.00 4.18
913 1429 2.444895 CCTCCCCCTCTTCCCTCG 60.445 72.222 0.00 0.00 0.00 4.63
914 1430 2.770475 GCCTCCCCCTCTTCCCTC 60.770 72.222 0.00 0.00 0.00 4.30
915 1431 2.898813 AAGCCTCCCCCTCTTCCCT 61.899 63.158 0.00 0.00 0.00 4.20
916 1432 2.286502 AAGCCTCCCCCTCTTCCC 60.287 66.667 0.00 0.00 0.00 3.97
917 1433 1.501654 AACAAGCCTCCCCCTCTTCC 61.502 60.000 0.00 0.00 0.00 3.46
918 1434 0.034960 GAACAAGCCTCCCCCTCTTC 60.035 60.000 0.00 0.00 0.00 2.87
919 1435 1.501654 GGAACAAGCCTCCCCCTCTT 61.502 60.000 0.00 0.00 0.00 2.85
920 1436 1.925972 GGAACAAGCCTCCCCCTCT 60.926 63.158 0.00 0.00 0.00 3.69
921 1437 2.677848 GGAACAAGCCTCCCCCTC 59.322 66.667 0.00 0.00 0.00 4.30
922 1438 2.941583 GGGAACAAGCCTCCCCCT 60.942 66.667 0.00 0.00 46.18 4.79
926 1442 0.675837 GGTTACGGGAACAAGCCTCC 60.676 60.000 5.30 0.00 40.09 4.30
927 1443 1.017701 CGGTTACGGGAACAAGCCTC 61.018 60.000 5.30 0.00 40.09 4.70
928 1444 1.004200 CGGTTACGGGAACAAGCCT 60.004 57.895 5.30 0.00 40.09 4.58
929 1445 3.569902 CGGTTACGGGAACAAGCC 58.430 61.111 5.30 0.00 40.09 4.35
939 1455 7.866393 AGTAATAAATGAGAGATTCCGGTTACG 59.134 37.037 0.00 0.00 40.55 3.18
940 1456 9.543783 AAGTAATAAATGAGAGATTCCGGTTAC 57.456 33.333 0.00 0.00 0.00 2.50
941 1457 9.542462 CAAGTAATAAATGAGAGATTCCGGTTA 57.458 33.333 0.00 0.00 0.00 2.85
942 1458 8.047310 ACAAGTAATAAATGAGAGATTCCGGTT 58.953 33.333 0.00 0.00 0.00 4.44
943 1459 7.565680 ACAAGTAATAAATGAGAGATTCCGGT 58.434 34.615 0.00 0.00 0.00 5.28
944 1460 8.438676 AACAAGTAATAAATGAGAGATTCCGG 57.561 34.615 0.00 0.00 0.00 5.14
949 1465 9.331282 GCCAGTAACAAGTAATAAATGAGAGAT 57.669 33.333 0.00 0.00 0.00 2.75
993 1509 1.062002 CCCAATTGCGACATCACGTAC 59.938 52.381 0.00 0.00 35.59 3.67
1000 1528 1.255882 TTGAAGCCCAATTGCGACAT 58.744 45.000 0.00 0.00 36.02 3.06
1018 1546 1.741706 CTTGACGGCATGCTCATCTTT 59.258 47.619 18.92 0.00 0.00 2.52
1020 1548 0.538584 TCTTGACGGCATGCTCATCT 59.461 50.000 18.92 0.00 0.00 2.90
1030 1558 0.250513 ATCTCCACCTTCTTGACGGC 59.749 55.000 0.00 0.00 0.00 5.68
1049 1585 0.328926 TTGCATGATGTCCAGAGCCA 59.671 50.000 0.00 0.00 0.00 4.75
1065 1601 1.239347 GAAGACCAGGTTCCTGTTGC 58.761 55.000 16.33 6.46 32.56 4.17
1089 1625 1.069090 GCTCAGAACACCGTGTCCA 59.931 57.895 4.23 0.00 0.00 4.02
1097 1633 1.388547 TGGTTTGTGGCTCAGAACAC 58.611 50.000 12.88 0.00 38.08 3.32
1105 1641 2.354074 CTTGCGCTTGGTTTGTGGCT 62.354 55.000 9.73 0.00 0.00 4.75
1106 1642 1.950630 CTTGCGCTTGGTTTGTGGC 60.951 57.895 9.73 0.00 0.00 5.01
1177 1724 0.996762 AAACTTGTCCCTGGGGGTGA 60.997 55.000 14.00 0.00 44.74 4.02
1211 1758 1.268184 TGCGCATTCGATTTGATGAGC 60.268 47.619 5.66 14.30 39.64 4.26
1258 1812 0.801251 GTGCTTCGCTCTTGATGCTT 59.199 50.000 3.77 0.00 39.17 3.91
1286 1848 1.138859 CGCAACCCCATACTGAGATCA 59.861 52.381 0.00 0.00 0.00 2.92
1315 1882 3.414700 GAGCACGAGTTGGCACGG 61.415 66.667 1.05 0.00 33.08 4.94
1324 1891 0.725686 CTGCTGAAATGGAGCACGAG 59.274 55.000 0.00 0.00 41.56 4.18
1326 1893 1.662629 CTACTGCTGAAATGGAGCACG 59.337 52.381 0.00 0.00 41.56 5.34
1357 1924 5.818336 CAGACATGAAAAGCAGAGATCTGAT 59.182 40.000 13.98 4.21 46.59 2.90
1362 1929 4.454847 CACACAGACATGAAAAGCAGAGAT 59.545 41.667 0.00 0.00 0.00 2.75
1448 2378 1.516161 GCATATCTCTTCATGCGGCA 58.484 50.000 4.58 4.58 38.31 5.69
1475 2601 1.202592 TGCAAAGGTGTAGTCGAGCAA 60.203 47.619 0.00 0.00 0.00 3.91
1495 2621 2.816411 TCCGTACCACCAAGAAGATCT 58.184 47.619 0.00 0.00 0.00 2.75
1503 2629 1.833787 GAGGGCTTCCGTACCACCAA 61.834 60.000 0.00 0.00 35.17 3.67
1533 2659 2.989909 TCACCATGGTATCAACAGCAG 58.010 47.619 19.28 0.58 0.00 4.24
1548 2674 1.699083 TCAGCAACAAGAGGATCACCA 59.301 47.619 0.00 0.00 37.82 4.17
1555 2681 3.571401 ACTTCCATTTCAGCAACAAGAGG 59.429 43.478 0.00 0.00 0.00 3.69
1583 2710 2.017049 ACAACTGCAGAACAACAGGAC 58.983 47.619 23.35 0.00 38.25 3.85
1620 2767 0.546598 ATGAAACTAGGGGGAAGGCG 59.453 55.000 0.00 0.00 0.00 5.52
1651 2804 9.479549 AATGACATTAGAAAAATACTGTGGGAT 57.520 29.630 0.00 0.00 0.00 3.85
1652 2805 8.739039 CAATGACATTAGAAAAATACTGTGGGA 58.261 33.333 0.00 0.00 0.00 4.37
1657 2810 9.265938 CACGACAATGACATTAGAAAAATACTG 57.734 33.333 0.00 0.00 0.00 2.74
1714 2876 6.428083 TTCAAACTGATGAAGGTACTGGTA 57.572 37.500 0.00 0.00 40.86 3.25
1720 2882 7.094634 GCTTCAGATTTCAAACTGATGAAGGTA 60.095 37.037 13.63 0.00 38.88 3.08
1722 2884 6.091437 GCTTCAGATTTCAAACTGATGAAGG 58.909 40.000 13.63 3.37 38.88 3.46
1731 2893 8.437742 CCATGTAAAATGCTTCAGATTTCAAAC 58.562 33.333 0.00 0.00 0.00 2.93
1733 2895 7.098477 CCCATGTAAAATGCTTCAGATTTCAA 58.902 34.615 0.00 0.00 0.00 2.69
1738 2900 3.385755 GGCCCATGTAAAATGCTTCAGAT 59.614 43.478 0.00 0.00 0.00 2.90
1744 2906 1.764134 CATGGGCCCATGTAAAATGCT 59.236 47.619 44.55 18.42 46.20 3.79
1756 2918 2.042639 AAGGACATGCATGGGCCC 60.043 61.111 29.41 24.40 40.13 5.80
1758 2920 1.027357 CTACAAGGACATGCATGGGC 58.973 55.000 29.41 20.15 41.68 5.36
1760 2922 3.119388 CCAAACTACAAGGACATGCATGG 60.119 47.826 29.41 14.24 0.00 3.66
1769 2931 5.128008 CCAAAGGAAAACCAAACTACAAGGA 59.872 40.000 0.00 0.00 0.00 3.36
1772 2934 5.024118 TCCCAAAGGAAAACCAAACTACAA 58.976 37.500 0.00 0.00 40.08 2.41
1774 2936 4.647853 ACTCCCAAAGGAAAACCAAACTAC 59.352 41.667 0.00 0.00 43.40 2.73
1775 2937 4.874199 ACTCCCAAAGGAAAACCAAACTA 58.126 39.130 0.00 0.00 43.40 2.24
1786 2948 2.574824 GGGCTAACTAACTCCCAAAGGA 59.425 50.000 0.00 0.00 41.08 3.36
1793 2955 3.782632 GCAGGGGCTAACTAACTCC 57.217 57.895 0.00 0.00 36.96 3.85
1811 2973 7.254932 GCTAATGCCAAAGAGAACCTACATAAG 60.255 40.741 0.00 0.00 0.00 1.73
1819 2981 5.358160 ACATAAGCTAATGCCAAAGAGAACC 59.642 40.000 0.00 0.00 40.80 3.62
1857 3019 8.098912 TGCTCACACTTAGATAATGCATGATAT 58.901 33.333 0.00 0.00 0.00 1.63
1883 3045 8.109634 TCCAAGATAAGCTTTCTTAAATCCTGT 58.890 33.333 17.72 0.00 38.21 4.00
1915 3077 9.569167 CTTATCTTCGTGACTTCTGTACATTTA 57.431 33.333 0.00 0.00 0.00 1.40
1925 3087 5.061920 ACACCTCTTATCTTCGTGACTTC 57.938 43.478 0.00 0.00 0.00 3.01
1928 3090 4.557205 ACAACACCTCTTATCTTCGTGAC 58.443 43.478 0.00 0.00 0.00 3.67
1997 3161 6.367695 GGTCAATTGGTATTTGGCTTAACAAC 59.632 38.462 5.42 0.00 29.55 3.32
1999 3163 5.540337 TGGTCAATTGGTATTTGGCTTAACA 59.460 36.000 5.42 0.00 0.00 2.41
2040 3204 7.861630 TCACCTCTTTATTTCTGAAAAAGACG 58.138 34.615 6.95 8.82 35.02 4.18
2041 3205 9.452065 GTTCACCTCTTTATTTCTGAAAAAGAC 57.548 33.333 6.95 0.00 35.02 3.01
2060 3224 6.656693 CCAGTGATTGAGATTAAAGTTCACCT 59.343 38.462 0.00 0.00 34.08 4.00
2064 3228 7.327032 GCAAACCAGTGATTGAGATTAAAGTTC 59.673 37.037 11.43 0.00 0.00 3.01
2079 3243 1.686355 ATTTCGGTGCAAACCAGTGA 58.314 45.000 0.00 0.00 0.00 3.41
2172 3337 2.093890 TGTTACTGTCCGGAGCGAATA 58.906 47.619 3.06 0.00 0.00 1.75
2180 3349 3.873910 AGGATGATTTGTTACTGTCCGG 58.126 45.455 0.00 0.00 0.00 5.14
2182 3351 7.390718 ACAAGTAAGGATGATTTGTTACTGTCC 59.609 37.037 0.00 0.00 36.17 4.02
2210 3379 4.737855 ACTGGCTTGTATCATCGTAGTT 57.262 40.909 0.00 0.00 0.00 2.24
2211 3380 6.940867 TCTATACTGGCTTGTATCATCGTAGT 59.059 38.462 6.92 0.00 35.14 2.73
2212 3381 7.379098 TCTATACTGGCTTGTATCATCGTAG 57.621 40.000 6.92 0.79 35.14 3.51
2213 3382 7.754851 TTCTATACTGGCTTGTATCATCGTA 57.245 36.000 6.92 0.00 35.14 3.43
2214 3383 6.650427 TTCTATACTGGCTTGTATCATCGT 57.350 37.500 6.92 0.00 35.14 3.73
2215 3384 7.946655 TTTTCTATACTGGCTTGTATCATCG 57.053 36.000 6.92 0.00 35.14 3.84
2291 3461 3.495670 AGACCTGATCGAGAAAAGTCG 57.504 47.619 0.00 0.00 41.51 4.18
2310 3480 4.578105 GTCAAATTTGAGATCAGGCCCTAG 59.422 45.833 21.05 0.00 37.98 3.02
2391 3561 6.150976 CCTACATGTGATCCAGCTAACAAAAA 59.849 38.462 9.11 0.00 0.00 1.94
2392 3562 5.647658 CCTACATGTGATCCAGCTAACAAAA 59.352 40.000 9.11 0.00 0.00 2.44
2393 3563 5.185454 CCTACATGTGATCCAGCTAACAAA 58.815 41.667 9.11 0.00 0.00 2.83
2395 3565 3.134623 CCCTACATGTGATCCAGCTAACA 59.865 47.826 9.11 0.00 0.00 2.41
2396 3566 3.134804 ACCCTACATGTGATCCAGCTAAC 59.865 47.826 9.11 0.00 0.00 2.34
2397 3567 3.384168 ACCCTACATGTGATCCAGCTAA 58.616 45.455 9.11 0.00 0.00 3.09
2398 3568 2.965831 GACCCTACATGTGATCCAGCTA 59.034 50.000 9.11 0.00 0.00 3.32
2399 3569 1.765314 GACCCTACATGTGATCCAGCT 59.235 52.381 9.11 0.00 0.00 4.24
2403 3573 2.289072 CGGATGACCCTACATGTGATCC 60.289 54.545 9.11 8.35 41.43 3.36
2418 3588 3.907221 AGGTAAAGTAGGCTACGGATGA 58.093 45.455 18.41 0.46 0.00 2.92
2421 3591 4.098501 GCTAAAGGTAAAGTAGGCTACGGA 59.901 45.833 18.41 5.64 0.00 4.69
2482 3653 4.283722 CCATCCATCTGTCATCATCAGAGA 59.716 45.833 0.00 0.00 43.66 3.10
2483 3654 4.283722 TCCATCCATCTGTCATCATCAGAG 59.716 45.833 0.00 0.00 43.66 3.35
2511 3682 1.188219 TCCCAGCACACTCCAGTCTC 61.188 60.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.