Multiple sequence alignment - TraesCS6D01G249200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G249200 | chr6D | 100.000 | 3104 | 0 | 0 | 1 | 3104 | 352834526 | 352837629 | 0.000000e+00 | 5733.0 |
1 | TraesCS6D01G249200 | chr6D | 94.514 | 401 | 19 | 3 | 2 | 399 | 17972632 | 17972232 | 1.580000e-172 | 616.0 |
2 | TraesCS6D01G249200 | chr6D | 94.859 | 389 | 16 | 4 | 2 | 388 | 141275130 | 141275516 | 3.420000e-169 | 604.0 |
3 | TraesCS6D01G249200 | chr6D | 83.594 | 256 | 42 | 0 | 1013 | 1268 | 298207274 | 298207019 | 1.110000e-59 | 241.0 |
4 | TraesCS6D01G249200 | chr6D | 82.869 | 251 | 41 | 2 | 1019 | 1268 | 296993543 | 296993294 | 1.120000e-54 | 224.0 |
5 | TraesCS6D01G249200 | chr6D | 82.308 | 260 | 38 | 5 | 1013 | 1268 | 298399315 | 298399060 | 5.210000e-53 | 219.0 |
6 | TraesCS6D01G249200 | chr6A | 92.906 | 1903 | 80 | 19 | 387 | 2278 | 490301193 | 490303051 | 0.000000e+00 | 2715.0 |
7 | TraesCS6D01G249200 | chr6A | 88.998 | 818 | 56 | 18 | 2295 | 3104 | 490303102 | 490303893 | 0.000000e+00 | 981.0 |
8 | TraesCS6D01G249200 | chr6A | 81.853 | 259 | 47 | 0 | 1010 | 1268 | 421102769 | 421103027 | 5.210000e-53 | 219.0 |
9 | TraesCS6D01G249200 | chr6B | 94.305 | 878 | 33 | 7 | 1332 | 2208 | 526100943 | 526100082 | 0.000000e+00 | 1328.0 |
10 | TraesCS6D01G249200 | chr6B | 93.577 | 903 | 37 | 7 | 387 | 1276 | 526101916 | 526101022 | 0.000000e+00 | 1327.0 |
11 | TraesCS6D01G249200 | chr6B | 89.259 | 810 | 52 | 18 | 2206 | 3000 | 526100049 | 526099260 | 0.000000e+00 | 981.0 |
12 | TraesCS6D01G249200 | chr6B | 83.203 | 256 | 43 | 0 | 1013 | 1268 | 461961858 | 461961603 | 5.170000e-58 | 235.0 |
13 | TraesCS6D01G249200 | chr6B | 82.677 | 254 | 44 | 0 | 1013 | 1266 | 461903664 | 461903411 | 3.110000e-55 | 226.0 |
14 | TraesCS6D01G249200 | chr6B | 82.422 | 256 | 45 | 0 | 1013 | 1268 | 461848254 | 461847999 | 1.120000e-54 | 224.0 |
15 | TraesCS6D01G249200 | chr5D | 95.607 | 387 | 15 | 1 | 2 | 386 | 272356056 | 272356442 | 1.220000e-173 | 619.0 |
16 | TraesCS6D01G249200 | chr4D | 95.596 | 386 | 17 | 0 | 1 | 386 | 385586711 | 385587096 | 1.220000e-173 | 619.0 |
17 | TraesCS6D01G249200 | chr4D | 95.584 | 385 | 17 | 0 | 2 | 386 | 5724572 | 5724188 | 4.400000e-173 | 617.0 |
18 | TraesCS6D01G249200 | chr4D | 94.885 | 391 | 19 | 1 | 1 | 391 | 396364788 | 396364399 | 7.360000e-171 | 610.0 |
19 | TraesCS6D01G249200 | chr4B | 95.596 | 386 | 14 | 3 | 2 | 385 | 206528090 | 206528474 | 1.580000e-172 | 616.0 |
20 | TraesCS6D01G249200 | chr2D | 94.697 | 396 | 20 | 1 | 2 | 396 | 399663060 | 399663455 | 5.690000e-172 | 614.0 |
21 | TraesCS6D01G249200 | chr2D | 93.617 | 94 | 5 | 1 | 1353 | 1445 | 555395715 | 555395808 | 4.170000e-29 | 139.0 |
22 | TraesCS6D01G249200 | chr2D | 95.349 | 86 | 4 | 0 | 1360 | 1445 | 555577008 | 555577093 | 1.500000e-28 | 137.0 |
23 | TraesCS6D01G249200 | chr7D | 94.207 | 397 | 20 | 3 | 2 | 396 | 561873790 | 561873395 | 1.230000e-168 | 603.0 |
24 | TraesCS6D01G249200 | chr7D | 90.361 | 83 | 8 | 0 | 1360 | 1442 | 165635180 | 165635262 | 3.270000e-20 | 110.0 |
25 | TraesCS6D01G249200 | chr2A | 95.556 | 90 | 4 | 0 | 1356 | 1445 | 695150630 | 695150719 | 8.970000e-31 | 145.0 |
26 | TraesCS6D01G249200 | chr2B | 94.444 | 90 | 5 | 0 | 1356 | 1445 | 662373640 | 662373729 | 4.170000e-29 | 139.0 |
27 | TraesCS6D01G249200 | chr2B | 92.553 | 94 | 6 | 1 | 1353 | 1445 | 661851750 | 661851843 | 1.940000e-27 | 134.0 |
28 | TraesCS6D01G249200 | chr7B | 90.361 | 83 | 8 | 0 | 1360 | 1442 | 128822544 | 128822626 | 3.270000e-20 | 110.0 |
29 | TraesCS6D01G249200 | chr3B | 90.566 | 53 | 3 | 2 | 2970 | 3020 | 336251334 | 336251386 | 5.550000e-08 | 69.4 |
30 | TraesCS6D01G249200 | chr1A | 90.000 | 50 | 3 | 2 | 2970 | 3017 | 167927976 | 167928025 | 2.580000e-06 | 63.9 |
31 | TraesCS6D01G249200 | chr5B | 87.719 | 57 | 0 | 6 | 2968 | 3020 | 214295904 | 214295851 | 3.340000e-05 | 60.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G249200 | chr6D | 352834526 | 352837629 | 3103 | False | 5733 | 5733 | 100.000000 | 1 | 3104 | 1 | chr6D.!!$F2 | 3103 |
1 | TraesCS6D01G249200 | chr6A | 490301193 | 490303893 | 2700 | False | 1848 | 2715 | 90.952000 | 387 | 3104 | 2 | chr6A.!!$F2 | 2717 |
2 | TraesCS6D01G249200 | chr6B | 526099260 | 526101916 | 2656 | True | 1212 | 1328 | 92.380333 | 387 | 3000 | 3 | chr6B.!!$R4 | 2613 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
380 | 381 | 0.034337 | ACACGTGTGGGCGTTAGATT | 59.966 | 50.0 | 22.71 | 0.0 | 43.83 | 2.40 | F |
994 | 1014 | 0.105453 | AGAGTGGTCTGGTCAGGTGT | 60.105 | 55.0 | 0.00 | 0.0 | 0.00 | 4.16 | F |
1272 | 1293 | 0.798776 | CCTTGCTCGGCAACAAGTAG | 59.201 | 55.0 | 7.15 | 0.0 | 43.99 | 2.57 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1277 | 1298 | 0.098728 | AATGCACGCAGATTAACGGC | 59.901 | 50.0 | 0.0 | 0.0 | 36.41 | 5.68 | R |
1902 | 1952 | 0.178929 | ACCACTCGTTTCCCTCCTCT | 60.179 | 55.0 | 0.0 | 0.0 | 0.00 | 3.69 | R |
3023 | 3158 | 0.036294 | GTGAGTCCTAGCCAACCACC | 60.036 | 60.0 | 0.0 | 0.0 | 0.00 | 4.61 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
29 | 30 | 9.927668 | AAAATATTTTCATGGTCAAAGTACTGG | 57.072 | 29.630 | 7.64 | 0.00 | 0.00 | 4.00 |
30 | 31 | 8.877864 | AATATTTTCATGGTCAAAGTACTGGA | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 3.86 |
31 | 32 | 8.877864 | ATATTTTCATGGTCAAAGTACTGGAA | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 3.53 |
32 | 33 | 7.781324 | ATTTTCATGGTCAAAGTACTGGAAT | 57.219 | 32.000 | 0.00 | 0.00 | 0.00 | 3.01 |
33 | 34 | 7.595819 | TTTTCATGGTCAAAGTACTGGAATT | 57.404 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
34 | 35 | 6.573664 | TTCATGGTCAAAGTACTGGAATTG | 57.426 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
35 | 36 | 4.458989 | TCATGGTCAAAGTACTGGAATTGC | 59.541 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
36 | 37 | 3.153919 | TGGTCAAAGTACTGGAATTGCC | 58.846 | 45.455 | 0.00 | 4.17 | 37.10 | 4.52 |
37 | 38 | 3.153919 | GGTCAAAGTACTGGAATTGCCA | 58.846 | 45.455 | 0.00 | 0.00 | 46.96 | 4.92 |
48 | 49 | 4.797800 | TGGAATTGCCATCATCGAAAAA | 57.202 | 36.364 | 0.00 | 0.00 | 43.33 | 1.94 |
49 | 50 | 4.493547 | TGGAATTGCCATCATCGAAAAAC | 58.506 | 39.130 | 0.00 | 0.00 | 43.33 | 2.43 |
50 | 51 | 4.220382 | TGGAATTGCCATCATCGAAAAACT | 59.780 | 37.500 | 0.00 | 0.00 | 43.33 | 2.66 |
51 | 52 | 4.563976 | GGAATTGCCATCATCGAAAAACTG | 59.436 | 41.667 | 0.00 | 0.00 | 36.34 | 3.16 |
52 | 53 | 5.389859 | AATTGCCATCATCGAAAAACTGA | 57.610 | 34.783 | 0.00 | 0.00 | 0.00 | 3.41 |
53 | 54 | 4.844998 | TTGCCATCATCGAAAAACTGAA | 57.155 | 36.364 | 0.00 | 0.00 | 0.00 | 3.02 |
54 | 55 | 4.844998 | TGCCATCATCGAAAAACTGAAA | 57.155 | 36.364 | 0.00 | 0.00 | 0.00 | 2.69 |
55 | 56 | 5.389859 | TGCCATCATCGAAAAACTGAAAT | 57.610 | 34.783 | 0.00 | 0.00 | 0.00 | 2.17 |
56 | 57 | 5.782047 | TGCCATCATCGAAAAACTGAAATT | 58.218 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
57 | 58 | 5.634439 | TGCCATCATCGAAAAACTGAAATTG | 59.366 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
58 | 59 | 5.445010 | GCCATCATCGAAAAACTGAAATTGC | 60.445 | 40.000 | 0.00 | 0.00 | 0.00 | 3.56 |
59 | 60 | 5.062558 | CCATCATCGAAAAACTGAAATTGCC | 59.937 | 40.000 | 0.00 | 0.00 | 0.00 | 4.52 |
60 | 61 | 5.193663 | TCATCGAAAAACTGAAATTGCCA | 57.806 | 34.783 | 0.00 | 0.00 | 0.00 | 4.92 |
61 | 62 | 5.782047 | TCATCGAAAAACTGAAATTGCCAT | 58.218 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
62 | 63 | 5.634439 | TCATCGAAAAACTGAAATTGCCATG | 59.366 | 36.000 | 0.00 | 0.00 | 0.00 | 3.66 |
63 | 64 | 5.193663 | TCGAAAAACTGAAATTGCCATGA | 57.806 | 34.783 | 0.00 | 0.00 | 0.00 | 3.07 |
64 | 65 | 5.782047 | TCGAAAAACTGAAATTGCCATGAT | 58.218 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
65 | 66 | 5.863397 | TCGAAAAACTGAAATTGCCATGATC | 59.137 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
66 | 67 | 5.865552 | CGAAAAACTGAAATTGCCATGATCT | 59.134 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
67 | 68 | 7.028962 | CGAAAAACTGAAATTGCCATGATCTA | 58.971 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
68 | 69 | 7.008628 | CGAAAAACTGAAATTGCCATGATCTAC | 59.991 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
69 | 70 | 6.839124 | AAACTGAAATTGCCATGATCTACA | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
70 | 71 | 6.839124 | AACTGAAATTGCCATGATCTACAA | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
71 | 72 | 6.839124 | ACTGAAATTGCCATGATCTACAAA | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
72 | 73 | 6.624423 | ACTGAAATTGCCATGATCTACAAAC | 58.376 | 36.000 | 0.00 | 0.00 | 0.00 | 2.93 |
73 | 74 | 6.435277 | ACTGAAATTGCCATGATCTACAAACT | 59.565 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
74 | 75 | 7.611467 | ACTGAAATTGCCATGATCTACAAACTA | 59.389 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
75 | 76 | 8.347004 | TGAAATTGCCATGATCTACAAACTAA | 57.653 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
76 | 77 | 8.801299 | TGAAATTGCCATGATCTACAAACTAAA | 58.199 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
77 | 78 | 9.807649 | GAAATTGCCATGATCTACAAACTAAAT | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
104 | 105 | 4.923281 | CCACATGGCAACTTTAGTTTAAGC | 59.077 | 41.667 | 0.00 | 0.00 | 35.83 | 3.09 |
105 | 106 | 5.508825 | CCACATGGCAACTTTAGTTTAAGCA | 60.509 | 40.000 | 0.00 | 0.00 | 35.83 | 3.91 |
106 | 107 | 5.402270 | CACATGGCAACTTTAGTTTAAGCAC | 59.598 | 40.000 | 0.00 | 0.00 | 35.83 | 4.40 |
107 | 108 | 5.301805 | ACATGGCAACTTTAGTTTAAGCACT | 59.698 | 36.000 | 0.00 | 0.00 | 35.83 | 4.40 |
108 | 109 | 6.488683 | ACATGGCAACTTTAGTTTAAGCACTA | 59.511 | 34.615 | 0.00 | 0.00 | 35.83 | 2.74 |
109 | 110 | 7.176690 | ACATGGCAACTTTAGTTTAAGCACTAT | 59.823 | 33.333 | 0.00 | 0.00 | 35.83 | 2.12 |
110 | 111 | 6.908825 | TGGCAACTTTAGTTTAAGCACTATG | 58.091 | 36.000 | 5.98 | 0.00 | 35.83 | 2.23 |
111 | 112 | 6.072175 | TGGCAACTTTAGTTTAAGCACTATGG | 60.072 | 38.462 | 5.98 | 0.00 | 35.83 | 2.74 |
112 | 113 | 5.800438 | GCAACTTTAGTTTAAGCACTATGGC | 59.200 | 40.000 | 0.00 | 0.00 | 35.83 | 4.40 |
113 | 114 | 6.569610 | GCAACTTTAGTTTAAGCACTATGGCA | 60.570 | 38.462 | 0.00 | 0.00 | 35.83 | 4.92 |
114 | 115 | 7.367285 | CAACTTTAGTTTAAGCACTATGGCAA | 58.633 | 34.615 | 0.00 | 0.00 | 35.83 | 4.52 |
115 | 116 | 6.909909 | ACTTTAGTTTAAGCACTATGGCAAC | 58.090 | 36.000 | 0.00 | 0.00 | 35.83 | 4.17 |
116 | 117 | 6.715264 | ACTTTAGTTTAAGCACTATGGCAACT | 59.285 | 34.615 | 0.00 | 0.00 | 33.68 | 3.16 |
117 | 118 | 7.881232 | ACTTTAGTTTAAGCACTATGGCAACTA | 59.119 | 33.333 | 0.00 | 0.00 | 32.13 | 2.24 |
118 | 119 | 7.605410 | TTAGTTTAAGCACTATGGCAACTAC | 57.395 | 36.000 | 0.00 | 0.00 | 32.73 | 2.73 |
119 | 120 | 5.556915 | AGTTTAAGCACTATGGCAACTACA | 58.443 | 37.500 | 0.00 | 0.00 | 35.83 | 2.74 |
120 | 121 | 5.643777 | AGTTTAAGCACTATGGCAACTACAG | 59.356 | 40.000 | 0.00 | 0.00 | 35.83 | 2.74 |
121 | 122 | 3.703001 | AAGCACTATGGCAACTACAGT | 57.297 | 42.857 | 0.00 | 0.00 | 35.83 | 3.55 |
122 | 123 | 2.977914 | AGCACTATGGCAACTACAGTG | 58.022 | 47.619 | 0.00 | 1.76 | 40.78 | 3.66 |
123 | 124 | 2.303022 | AGCACTATGGCAACTACAGTGT | 59.697 | 45.455 | 0.00 | 0.00 | 40.30 | 3.55 |
124 | 125 | 3.513912 | AGCACTATGGCAACTACAGTGTA | 59.486 | 43.478 | 2.36 | 2.36 | 40.30 | 2.90 |
125 | 126 | 4.020573 | AGCACTATGGCAACTACAGTGTAA | 60.021 | 41.667 | 4.21 | 0.00 | 40.30 | 2.41 |
126 | 127 | 4.693566 | GCACTATGGCAACTACAGTGTAAA | 59.306 | 41.667 | 4.21 | 0.00 | 40.30 | 2.01 |
127 | 128 | 5.390567 | GCACTATGGCAACTACAGTGTAAAC | 60.391 | 44.000 | 4.21 | 0.00 | 40.30 | 2.01 |
128 | 129 | 5.699001 | CACTATGGCAACTACAGTGTAAACA | 59.301 | 40.000 | 4.21 | 0.21 | 36.34 | 2.83 |
129 | 130 | 6.371548 | CACTATGGCAACTACAGTGTAAACAT | 59.628 | 38.462 | 4.21 | 7.13 | 36.34 | 2.71 |
130 | 131 | 6.940298 | ACTATGGCAACTACAGTGTAAACATT | 59.060 | 34.615 | 4.21 | 0.00 | 37.61 | 2.71 |
131 | 132 | 8.098286 | ACTATGGCAACTACAGTGTAAACATTA | 58.902 | 33.333 | 4.21 | 0.00 | 37.61 | 1.90 |
132 | 133 | 7.938140 | ATGGCAACTACAGTGTAAACATTAT | 57.062 | 32.000 | 4.21 | 0.00 | 37.61 | 1.28 |
133 | 134 | 7.139896 | TGGCAACTACAGTGTAAACATTATG | 57.860 | 36.000 | 4.21 | 0.00 | 37.61 | 1.90 |
134 | 135 | 6.150307 | TGGCAACTACAGTGTAAACATTATGG | 59.850 | 38.462 | 4.21 | 0.00 | 37.61 | 2.74 |
135 | 136 | 6.027749 | GCAACTACAGTGTAAACATTATGGC | 58.972 | 40.000 | 4.21 | 0.00 | 0.00 | 4.40 |
136 | 137 | 6.348950 | GCAACTACAGTGTAAACATTATGGCA | 60.349 | 38.462 | 4.21 | 0.00 | 0.00 | 4.92 |
137 | 138 | 7.589395 | CAACTACAGTGTAAACATTATGGCAA | 58.411 | 34.615 | 4.21 | 0.00 | 0.00 | 4.52 |
138 | 139 | 7.141100 | ACTACAGTGTAAACATTATGGCAAC | 57.859 | 36.000 | 4.21 | 0.00 | 0.00 | 4.17 |
139 | 140 | 6.940298 | ACTACAGTGTAAACATTATGGCAACT | 59.060 | 34.615 | 4.21 | 0.00 | 37.61 | 3.16 |
140 | 141 | 6.648879 | ACAGTGTAAACATTATGGCAACTT | 57.351 | 33.333 | 0.00 | 0.00 | 37.61 | 2.66 |
141 | 142 | 7.049799 | ACAGTGTAAACATTATGGCAACTTT | 57.950 | 32.000 | 0.00 | 0.00 | 37.61 | 2.66 |
142 | 143 | 7.496747 | ACAGTGTAAACATTATGGCAACTTTT | 58.503 | 30.769 | 0.00 | 0.00 | 37.61 | 2.27 |
143 | 144 | 7.437862 | ACAGTGTAAACATTATGGCAACTTTTG | 59.562 | 33.333 | 0.00 | 0.00 | 37.61 | 2.44 |
144 | 145 | 6.928492 | AGTGTAAACATTATGGCAACTTTTGG | 59.072 | 34.615 | 0.00 | 0.00 | 37.61 | 3.28 |
145 | 146 | 6.147000 | GTGTAAACATTATGGCAACTTTTGGG | 59.853 | 38.462 | 0.00 | 0.00 | 37.61 | 4.12 |
146 | 147 | 4.972751 | AACATTATGGCAACTTTTGGGT | 57.027 | 36.364 | 0.00 | 0.00 | 37.61 | 4.51 |
147 | 148 | 6.426646 | AAACATTATGGCAACTTTTGGGTA | 57.573 | 33.333 | 0.00 | 0.00 | 37.61 | 3.69 |
148 | 149 | 6.426646 | AACATTATGGCAACTTTTGGGTAA | 57.573 | 33.333 | 0.00 | 0.00 | 37.61 | 2.85 |
149 | 150 | 6.426646 | ACATTATGGCAACTTTTGGGTAAA | 57.573 | 33.333 | 0.00 | 0.00 | 37.61 | 2.01 |
150 | 151 | 6.831976 | ACATTATGGCAACTTTTGGGTAAAA | 58.168 | 32.000 | 0.00 | 0.00 | 34.75 | 1.52 |
151 | 152 | 7.283329 | ACATTATGGCAACTTTTGGGTAAAAA | 58.717 | 30.769 | 0.00 | 0.00 | 35.50 | 1.94 |
175 | 176 | 8.964420 | AAAAATTCGTCGAAACATATCAACAT | 57.036 | 26.923 | 12.40 | 0.00 | 0.00 | 2.71 |
176 | 177 | 7.953305 | AAATTCGTCGAAACATATCAACATG | 57.047 | 32.000 | 12.40 | 0.00 | 0.00 | 3.21 |
177 | 178 | 6.902224 | ATTCGTCGAAACATATCAACATGA | 57.098 | 33.333 | 12.40 | 0.00 | 0.00 | 3.07 |
178 | 179 | 5.949233 | TCGTCGAAACATATCAACATGAG | 57.051 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
179 | 180 | 4.803613 | TCGTCGAAACATATCAACATGAGG | 59.196 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
180 | 181 | 4.566759 | CGTCGAAACATATCAACATGAGGT | 59.433 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
181 | 182 | 5.276395 | CGTCGAAACATATCAACATGAGGTC | 60.276 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
182 | 183 | 5.812642 | GTCGAAACATATCAACATGAGGTCT | 59.187 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
183 | 184 | 6.978659 | GTCGAAACATATCAACATGAGGTCTA | 59.021 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
184 | 185 | 7.168302 | GTCGAAACATATCAACATGAGGTCTAG | 59.832 | 40.741 | 0.00 | 0.00 | 0.00 | 2.43 |
185 | 186 | 6.980978 | CGAAACATATCAACATGAGGTCTAGT | 59.019 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
186 | 187 | 7.492669 | CGAAACATATCAACATGAGGTCTAGTT | 59.507 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
187 | 188 | 9.167311 | GAAACATATCAACATGAGGTCTAGTTT | 57.833 | 33.333 | 0.00 | 3.10 | 0.00 | 2.66 |
188 | 189 | 9.520515 | AAACATATCAACATGAGGTCTAGTTTT | 57.479 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
189 | 190 | 8.498054 | ACATATCAACATGAGGTCTAGTTTTG | 57.502 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
190 | 191 | 8.321353 | ACATATCAACATGAGGTCTAGTTTTGA | 58.679 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
191 | 192 | 9.166173 | CATATCAACATGAGGTCTAGTTTTGAA | 57.834 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
192 | 193 | 7.678947 | ATCAACATGAGGTCTAGTTTTGAAG | 57.321 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
193 | 194 | 6.826668 | TCAACATGAGGTCTAGTTTTGAAGA | 58.173 | 36.000 | 0.00 | 0.00 | 0.00 | 2.87 |
194 | 195 | 7.453393 | TCAACATGAGGTCTAGTTTTGAAGAT | 58.547 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
195 | 196 | 7.604164 | TCAACATGAGGTCTAGTTTTGAAGATC | 59.396 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
196 | 197 | 7.251321 | ACATGAGGTCTAGTTTTGAAGATCT | 57.749 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
197 | 198 | 7.327214 | ACATGAGGTCTAGTTTTGAAGATCTC | 58.673 | 38.462 | 0.00 | 5.80 | 38.59 | 2.75 |
198 | 199 | 5.955488 | TGAGGTCTAGTTTTGAAGATCTCG | 58.045 | 41.667 | 0.00 | 0.00 | 40.38 | 4.04 |
199 | 200 | 5.477291 | TGAGGTCTAGTTTTGAAGATCTCGT | 59.523 | 40.000 | 0.00 | 0.00 | 40.38 | 4.18 |
200 | 201 | 5.956642 | AGGTCTAGTTTTGAAGATCTCGTC | 58.043 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
201 | 202 | 4.794246 | GGTCTAGTTTTGAAGATCTCGTCG | 59.206 | 45.833 | 0.00 | 0.00 | 0.00 | 5.12 |
202 | 203 | 5.391736 | GGTCTAGTTTTGAAGATCTCGTCGA | 60.392 | 44.000 | 0.00 | 0.00 | 0.00 | 4.20 |
203 | 204 | 5.735427 | GTCTAGTTTTGAAGATCTCGTCGAG | 59.265 | 44.000 | 16.33 | 16.33 | 0.00 | 4.04 |
204 | 205 | 4.768130 | AGTTTTGAAGATCTCGTCGAGA | 57.232 | 40.909 | 26.15 | 26.15 | 43.20 | 4.04 |
205 | 206 | 4.477780 | AGTTTTGAAGATCTCGTCGAGAC | 58.522 | 43.478 | 26.46 | 18.95 | 41.76 | 3.36 |
219 | 220 | 3.777478 | GTCGAGACGGATTTAATGGTGA | 58.223 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
220 | 221 | 4.178540 | GTCGAGACGGATTTAATGGTGAA | 58.821 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
221 | 222 | 4.628333 | GTCGAGACGGATTTAATGGTGAAA | 59.372 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
222 | 223 | 5.121142 | GTCGAGACGGATTTAATGGTGAAAA | 59.879 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
223 | 224 | 5.121142 | TCGAGACGGATTTAATGGTGAAAAC | 59.879 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
224 | 225 | 5.106869 | CGAGACGGATTTAATGGTGAAAACA | 60.107 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
225 | 226 | 6.254281 | AGACGGATTTAATGGTGAAAACAG | 57.746 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
226 | 227 | 6.001460 | AGACGGATTTAATGGTGAAAACAGA | 58.999 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
227 | 228 | 6.659242 | AGACGGATTTAATGGTGAAAACAGAT | 59.341 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
228 | 229 | 7.176690 | AGACGGATTTAATGGTGAAAACAGATT | 59.823 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
229 | 230 | 7.666623 | ACGGATTTAATGGTGAAAACAGATTT | 58.333 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
230 | 231 | 8.147704 | ACGGATTTAATGGTGAAAACAGATTTT | 58.852 | 29.630 | 0.00 | 0.00 | 40.83 | 1.82 |
231 | 232 | 8.987890 | CGGATTTAATGGTGAAAACAGATTTTT | 58.012 | 29.630 | 0.00 | 0.00 | 38.17 | 1.94 |
238 | 239 | 7.401484 | TGGTGAAAACAGATTTTTAATTCGC | 57.599 | 32.000 | 0.00 | 0.00 | 38.17 | 4.70 |
239 | 240 | 7.206687 | TGGTGAAAACAGATTTTTAATTCGCT | 58.793 | 30.769 | 0.00 | 0.00 | 38.17 | 4.93 |
240 | 241 | 7.708752 | TGGTGAAAACAGATTTTTAATTCGCTT | 59.291 | 29.630 | 0.00 | 0.00 | 38.17 | 4.68 |
241 | 242 | 8.547894 | GGTGAAAACAGATTTTTAATTCGCTTT | 58.452 | 29.630 | 0.00 | 0.00 | 38.17 | 3.51 |
242 | 243 | 9.914923 | GTGAAAACAGATTTTTAATTCGCTTTT | 57.085 | 25.926 | 0.00 | 0.00 | 38.17 | 2.27 |
281 | 282 | 7.929941 | AAACATTTTTAAGCCAAAAACCAGA | 57.070 | 28.000 | 8.31 | 0.00 | 46.19 | 3.86 |
282 | 283 | 7.929941 | AACATTTTTAAGCCAAAAACCAGAA | 57.070 | 28.000 | 8.31 | 0.00 | 46.19 | 3.02 |
283 | 284 | 7.929941 | ACATTTTTAAGCCAAAAACCAGAAA | 57.070 | 28.000 | 8.31 | 0.00 | 46.19 | 2.52 |
284 | 285 | 7.984391 | ACATTTTTAAGCCAAAAACCAGAAAG | 58.016 | 30.769 | 8.31 | 0.00 | 46.19 | 2.62 |
285 | 286 | 7.826744 | ACATTTTTAAGCCAAAAACCAGAAAGA | 59.173 | 29.630 | 8.31 | 0.00 | 46.19 | 2.52 |
286 | 287 | 8.839343 | CATTTTTAAGCCAAAAACCAGAAAGAT | 58.161 | 29.630 | 8.31 | 0.00 | 46.19 | 2.40 |
287 | 288 | 8.800370 | TTTTTAAGCCAAAAACCAGAAAGATT | 57.200 | 26.923 | 3.16 | 0.00 | 40.39 | 2.40 |
288 | 289 | 8.800370 | TTTTAAGCCAAAAACCAGAAAGATTT | 57.200 | 26.923 | 0.00 | 0.00 | 33.14 | 2.17 |
289 | 290 | 8.432110 | TTTAAGCCAAAAACCAGAAAGATTTC | 57.568 | 30.769 | 0.00 | 0.00 | 37.45 | 2.17 |
302 | 303 | 6.680874 | AGAAAGATTTCTGCTGATGTCATC | 57.319 | 37.500 | 7.02 | 5.83 | 45.27 | 2.92 |
303 | 304 | 6.416415 | AGAAAGATTTCTGCTGATGTCATCT | 58.584 | 36.000 | 13.90 | 2.28 | 45.27 | 2.90 |
304 | 305 | 6.316640 | AGAAAGATTTCTGCTGATGTCATCTG | 59.683 | 38.462 | 13.90 | 13.85 | 45.27 | 2.90 |
305 | 306 | 5.100344 | AGATTTCTGCTGATGTCATCTGT | 57.900 | 39.130 | 17.91 | 0.95 | 0.00 | 3.41 |
306 | 307 | 5.498393 | AGATTTCTGCTGATGTCATCTGTT | 58.502 | 37.500 | 17.91 | 1.31 | 0.00 | 3.16 |
307 | 308 | 5.585445 | AGATTTCTGCTGATGTCATCTGTTC | 59.415 | 40.000 | 17.91 | 6.13 | 0.00 | 3.18 |
308 | 309 | 3.967332 | TCTGCTGATGTCATCTGTTCA | 57.033 | 42.857 | 17.91 | 9.59 | 0.00 | 3.18 |
309 | 310 | 4.482952 | TCTGCTGATGTCATCTGTTCAT | 57.517 | 40.909 | 17.91 | 0.00 | 0.00 | 2.57 |
310 | 311 | 5.603170 | TCTGCTGATGTCATCTGTTCATA | 57.397 | 39.130 | 17.91 | 2.78 | 0.00 | 2.15 |
311 | 312 | 5.354767 | TCTGCTGATGTCATCTGTTCATAC | 58.645 | 41.667 | 17.91 | 4.40 | 0.00 | 2.39 |
312 | 313 | 4.114794 | TGCTGATGTCATCTGTTCATACG | 58.885 | 43.478 | 17.91 | 0.00 | 0.00 | 3.06 |
313 | 314 | 4.115516 | GCTGATGTCATCTGTTCATACGT | 58.884 | 43.478 | 17.91 | 0.00 | 0.00 | 3.57 |
314 | 315 | 4.026228 | GCTGATGTCATCTGTTCATACGTG | 60.026 | 45.833 | 17.91 | 0.00 | 0.00 | 4.49 |
315 | 316 | 4.432712 | TGATGTCATCTGTTCATACGTGG | 58.567 | 43.478 | 13.90 | 0.00 | 0.00 | 4.94 |
316 | 317 | 2.616960 | TGTCATCTGTTCATACGTGGC | 58.383 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
317 | 318 | 2.028567 | TGTCATCTGTTCATACGTGGCA | 60.029 | 45.455 | 0.00 | 0.00 | 0.00 | 4.92 |
318 | 319 | 3.000041 | GTCATCTGTTCATACGTGGCAA | 59.000 | 45.455 | 0.00 | 0.00 | 0.00 | 4.52 |
319 | 320 | 3.435327 | GTCATCTGTTCATACGTGGCAAA | 59.565 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
320 | 321 | 4.068599 | TCATCTGTTCATACGTGGCAAAA | 58.931 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
321 | 322 | 4.699735 | TCATCTGTTCATACGTGGCAAAAT | 59.300 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
322 | 323 | 4.418013 | TCTGTTCATACGTGGCAAAATG | 57.582 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
323 | 324 | 4.068599 | TCTGTTCATACGTGGCAAAATGA | 58.931 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
324 | 325 | 4.154015 | TCTGTTCATACGTGGCAAAATGAG | 59.846 | 41.667 | 0.00 | 0.00 | 30.53 | 2.90 |
325 | 326 | 3.818210 | TGTTCATACGTGGCAAAATGAGT | 59.182 | 39.130 | 0.00 | 0.00 | 30.53 | 3.41 |
326 | 327 | 4.158384 | GTTCATACGTGGCAAAATGAGTG | 58.842 | 43.478 | 0.00 | 0.00 | 30.53 | 3.51 |
327 | 328 | 2.746904 | TCATACGTGGCAAAATGAGTGG | 59.253 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
328 | 329 | 2.264005 | TACGTGGCAAAATGAGTGGT | 57.736 | 45.000 | 0.00 | 0.00 | 0.00 | 4.16 |
329 | 330 | 0.667993 | ACGTGGCAAAATGAGTGGTG | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
330 | 331 | 0.950836 | CGTGGCAAAATGAGTGGTGA | 59.049 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
331 | 332 | 1.541147 | CGTGGCAAAATGAGTGGTGAT | 59.459 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
332 | 333 | 2.669113 | CGTGGCAAAATGAGTGGTGATG | 60.669 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
333 | 334 | 1.894466 | TGGCAAAATGAGTGGTGATGG | 59.106 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
334 | 335 | 2.170166 | GGCAAAATGAGTGGTGATGGA | 58.830 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
335 | 336 | 2.165030 | GGCAAAATGAGTGGTGATGGAG | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
336 | 337 | 2.165030 | GCAAAATGAGTGGTGATGGAGG | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
337 | 338 | 2.134789 | AAATGAGTGGTGATGGAGGC | 57.865 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
338 | 339 | 0.107508 | AATGAGTGGTGATGGAGGCG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
339 | 340 | 1.267574 | ATGAGTGGTGATGGAGGCGT | 61.268 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
340 | 341 | 1.448540 | GAGTGGTGATGGAGGCGTG | 60.449 | 63.158 | 0.00 | 0.00 | 0.00 | 5.34 |
341 | 342 | 2.172483 | GAGTGGTGATGGAGGCGTGT | 62.172 | 60.000 | 0.00 | 0.00 | 0.00 | 4.49 |
342 | 343 | 2.034879 | GTGGTGATGGAGGCGTGTG | 61.035 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
343 | 344 | 2.436646 | GGTGATGGAGGCGTGTGG | 60.437 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
344 | 345 | 2.436646 | GTGATGGAGGCGTGTGGG | 60.437 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
345 | 346 | 4.408821 | TGATGGAGGCGTGTGGGC | 62.409 | 66.667 | 0.00 | 0.00 | 42.69 | 5.36 |
352 | 353 | 3.192922 | GGCGTGTGGGCGATGTAC | 61.193 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
353 | 354 | 2.433491 | GCGTGTGGGCGATGTACA | 60.433 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
354 | 355 | 2.030401 | GCGTGTGGGCGATGTACAA | 61.030 | 57.895 | 0.00 | 0.00 | 0.00 | 2.41 |
355 | 356 | 1.570347 | GCGTGTGGGCGATGTACAAA | 61.570 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
356 | 357 | 1.083489 | CGTGTGGGCGATGTACAAAT | 58.917 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
357 | 358 | 1.202020 | CGTGTGGGCGATGTACAAATG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
358 | 359 | 0.808125 | TGTGGGCGATGTACAAATGC | 59.192 | 50.000 | 0.00 | 4.11 | 0.00 | 3.56 |
359 | 360 | 0.100503 | GTGGGCGATGTACAAATGCC | 59.899 | 55.000 | 21.68 | 21.68 | 44.98 | 4.40 |
361 | 362 | 2.487918 | GGCGATGTACAAATGCCCA | 58.512 | 52.632 | 20.03 | 0.00 | 39.83 | 5.36 |
362 | 363 | 0.100503 | GGCGATGTACAAATGCCCAC | 59.899 | 55.000 | 20.03 | 2.10 | 39.83 | 4.61 |
363 | 364 | 0.808125 | GCGATGTACAAATGCCCACA | 59.192 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
364 | 365 | 1.467374 | GCGATGTACAAATGCCCACAC | 60.467 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
365 | 366 | 1.202020 | CGATGTACAAATGCCCACACG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.49 |
366 | 367 | 1.810151 | GATGTACAAATGCCCACACGT | 59.190 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
367 | 368 | 0.947960 | TGTACAAATGCCCACACGTG | 59.052 | 50.000 | 15.48 | 15.48 | 0.00 | 4.49 |
368 | 369 | 0.948678 | GTACAAATGCCCACACGTGT | 59.051 | 50.000 | 17.22 | 17.22 | 32.44 | 4.49 |
369 | 370 | 0.947960 | TACAAATGCCCACACGTGTG | 59.052 | 50.000 | 36.13 | 36.13 | 45.23 | 3.82 |
377 | 378 | 3.240203 | CACACGTGTGGGCGTTAG | 58.760 | 61.111 | 35.65 | 12.08 | 43.83 | 2.34 |
378 | 379 | 1.300311 | CACACGTGTGGGCGTTAGA | 60.300 | 57.895 | 35.65 | 0.00 | 43.83 | 2.10 |
379 | 380 | 0.669318 | CACACGTGTGGGCGTTAGAT | 60.669 | 55.000 | 35.65 | 0.55 | 43.83 | 1.98 |
380 | 381 | 0.034337 | ACACGTGTGGGCGTTAGATT | 59.966 | 50.000 | 22.71 | 0.00 | 43.83 | 2.40 |
381 | 382 | 1.153353 | CACGTGTGGGCGTTAGATTT | 58.847 | 50.000 | 7.58 | 0.00 | 43.83 | 2.17 |
382 | 383 | 1.533731 | CACGTGTGGGCGTTAGATTTT | 59.466 | 47.619 | 7.58 | 0.00 | 43.83 | 1.82 |
383 | 384 | 1.802365 | ACGTGTGGGCGTTAGATTTTC | 59.198 | 47.619 | 0.00 | 0.00 | 43.04 | 2.29 |
384 | 385 | 1.129811 | CGTGTGGGCGTTAGATTTTCC | 59.870 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
385 | 386 | 1.129811 | GTGTGGGCGTTAGATTTTCCG | 59.870 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
392 | 393 | 4.538917 | GGCGTTAGATTTTCCGAACAAAA | 58.461 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
435 | 436 | 2.096496 | CGGAAAAGCGCAATCATCTCTT | 59.904 | 45.455 | 11.47 | 0.00 | 0.00 | 2.85 |
436 | 437 | 3.432782 | GGAAAAGCGCAATCATCTCTTG | 58.567 | 45.455 | 11.47 | 0.00 | 0.00 | 3.02 |
549 | 553 | 4.977741 | TTAAGCAAGTGTACGTGTAAGC | 57.022 | 40.909 | 0.00 | 0.00 | 0.00 | 3.09 |
550 | 554 | 2.814280 | AGCAAGTGTACGTGTAAGCT | 57.186 | 45.000 | 0.00 | 0.00 | 0.00 | 3.74 |
551 | 555 | 2.673833 | AGCAAGTGTACGTGTAAGCTC | 58.326 | 47.619 | 0.00 | 0.00 | 0.00 | 4.09 |
552 | 556 | 2.296471 | AGCAAGTGTACGTGTAAGCTCT | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 4.09 |
559 | 563 | 0.169230 | ACGTGTAAGCTCTCTCGCTG | 59.831 | 55.000 | 10.79 | 0.00 | 40.79 | 5.18 |
562 | 566 | 1.227118 | GTAAGCTCTCTCGCTGGGC | 60.227 | 63.158 | 0.00 | 0.00 | 40.79 | 5.36 |
591 | 595 | 3.108289 | CCGTCAGTGCTGAGTGCG | 61.108 | 66.667 | 1.65 | 3.29 | 46.63 | 5.34 |
942 | 962 | 3.706373 | CCGTCCCACCACCTCCTG | 61.706 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
946 | 966 | 2.203998 | CCCACCACCTCCTGGACT | 60.204 | 66.667 | 0.00 | 0.00 | 43.95 | 3.85 |
952 | 972 | 4.316823 | ACCTCCTGGACTCGGGCA | 62.317 | 66.667 | 5.55 | 0.00 | 39.31 | 5.36 |
954 | 974 | 2.581354 | CTCCTGGACTCGGGCAAG | 59.419 | 66.667 | 0.00 | 0.00 | 39.31 | 4.01 |
968 | 988 | 2.338500 | GGGCAAGTCGAAGTAGAACAG | 58.662 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
994 | 1014 | 0.105453 | AGAGTGGTCTGGTCAGGTGT | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1272 | 1293 | 0.798776 | CCTTGCTCGGCAACAAGTAG | 59.201 | 55.000 | 7.15 | 0.00 | 43.99 | 2.57 |
1276 | 1297 | 1.362406 | GCTCGGCAACAAGTAGGCTC | 61.362 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1277 | 1298 | 1.078759 | CTCGGCAACAAGTAGGCTCG | 61.079 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
1278 | 1299 | 2.740714 | CGGCAACAAGTAGGCTCGC | 61.741 | 63.158 | 0.00 | 0.00 | 0.00 | 5.03 |
1279 | 1300 | 2.399356 | GGCAACAAGTAGGCTCGCC | 61.399 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
1280 | 1301 | 2.740714 | GCAACAAGTAGGCTCGCCG | 61.741 | 63.158 | 1.69 | 0.00 | 41.95 | 6.46 |
1281 | 1302 | 1.374252 | CAACAAGTAGGCTCGCCGT | 60.374 | 57.895 | 1.69 | 0.00 | 41.95 | 5.68 |
1286 | 1307 | 1.859080 | CAAGTAGGCTCGCCGTTAATC | 59.141 | 52.381 | 1.69 | 0.00 | 41.95 | 1.75 |
1313 | 1334 | 2.221981 | GCATTCGGTTCCGAGATTGATC | 59.778 | 50.000 | 13.56 | 0.00 | 39.68 | 2.92 |
1442 | 1492 | 1.795286 | GAACACGCACCTGAAGAAGAG | 59.205 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
1560 | 1610 | 2.755876 | ATGACGAGCAGCGAGGGA | 60.756 | 61.111 | 5.99 | 0.00 | 44.57 | 4.20 |
1898 | 1948 | 2.925706 | TACGACCAAGGCCAGCCA | 60.926 | 61.111 | 12.03 | 0.00 | 38.92 | 4.75 |
1899 | 1949 | 2.521451 | TACGACCAAGGCCAGCCAA | 61.521 | 57.895 | 12.03 | 0.00 | 38.92 | 4.52 |
1902 | 1952 | 1.228552 | GACCAAGGCCAGCCAAGAA | 60.229 | 57.895 | 12.03 | 0.00 | 38.92 | 2.52 |
1927 | 1977 | 1.652563 | GGAAACGAGTGGTGGTTGC | 59.347 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
1933 | 1983 | 1.021390 | CGAGTGGTGGTTGCAGGATC | 61.021 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2024 | 2074 | 2.901042 | CTACCCGGGCCAACTCTC | 59.099 | 66.667 | 24.08 | 0.00 | 0.00 | 3.20 |
2059 | 2109 | 2.039084 | GACATGGTGATGGTATCCTCCC | 59.961 | 54.545 | 0.00 | 0.00 | 33.39 | 4.30 |
2064 | 2114 | 0.345146 | TGATGGTATCCTCCCACCCA | 59.655 | 55.000 | 0.00 | 0.00 | 34.07 | 4.51 |
2247 | 2335 | 6.554334 | TTGAAGGAATGAAAAGTTAGGTCG | 57.446 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
2272 | 2360 | 0.531200 | AGGCCAAGTAGCACGAGTAC | 59.469 | 55.000 | 5.01 | 0.00 | 0.00 | 2.73 |
2284 | 2372 | 3.391955 | AGCACGAGTACCTCTACTATCCT | 59.608 | 47.826 | 0.00 | 0.00 | 32.96 | 3.24 |
2285 | 2373 | 4.592351 | AGCACGAGTACCTCTACTATCCTA | 59.408 | 45.833 | 0.00 | 0.00 | 32.96 | 2.94 |
2286 | 2374 | 5.248934 | AGCACGAGTACCTCTACTATCCTAT | 59.751 | 44.000 | 0.00 | 0.00 | 32.96 | 2.57 |
2288 | 2376 | 6.574859 | GCACGAGTACCTCTACTATCCTATCT | 60.575 | 46.154 | 0.00 | 0.00 | 32.96 | 1.98 |
2289 | 2377 | 7.363705 | GCACGAGTACCTCTACTATCCTATCTA | 60.364 | 44.444 | 0.00 | 0.00 | 32.96 | 1.98 |
2291 | 2379 | 8.752187 | ACGAGTACCTCTACTATCCTATCTAAG | 58.248 | 40.741 | 0.00 | 0.00 | 32.96 | 2.18 |
2292 | 2380 | 8.970020 | CGAGTACCTCTACTATCCTATCTAAGA | 58.030 | 40.741 | 0.00 | 0.00 | 32.96 | 2.10 |
2336 | 2462 | 1.072173 | TGTATGCAACAGCACTCCACT | 59.928 | 47.619 | 0.00 | 0.00 | 41.80 | 4.00 |
2359 | 2485 | 1.202687 | TCAACAGCCAGTGAGAAGTGG | 60.203 | 52.381 | 0.00 | 0.00 | 36.85 | 4.00 |
2396 | 2522 | 6.203647 | CGTACGGATGTAGTATGTCATTTGA | 58.796 | 40.000 | 7.57 | 0.00 | 0.00 | 2.69 |
2449 | 2575 | 7.810766 | AAAATTGCGACTAATTTGTACCATG | 57.189 | 32.000 | 6.33 | 0.00 | 39.48 | 3.66 |
2451 | 2577 | 3.339141 | TGCGACTAATTTGTACCATGCA | 58.661 | 40.909 | 0.00 | 0.00 | 0.00 | 3.96 |
2452 | 2578 | 3.944650 | TGCGACTAATTTGTACCATGCAT | 59.055 | 39.130 | 0.00 | 0.00 | 0.00 | 3.96 |
2453 | 2579 | 5.119694 | TGCGACTAATTTGTACCATGCATA | 58.880 | 37.500 | 0.00 | 0.00 | 0.00 | 3.14 |
2454 | 2580 | 5.762711 | TGCGACTAATTTGTACCATGCATAT | 59.237 | 36.000 | 0.00 | 0.00 | 0.00 | 1.78 |
2526 | 2655 | 3.199946 | CCACCACTACTACCACCATCATT | 59.800 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
2527 | 2656 | 4.407621 | CCACCACTACTACCACCATCATTA | 59.592 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
2528 | 2657 | 5.453339 | CCACCACTACTACCACCATCATTAG | 60.453 | 48.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2623 | 2753 | 6.641169 | AACCTTTTTCTTCTCCTTTAGCTG | 57.359 | 37.500 | 0.00 | 0.00 | 0.00 | 4.24 |
2743 | 2878 | 2.178580 | GTGAAATGGGAGCATGGGAAA | 58.821 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
2744 | 2879 | 2.767960 | GTGAAATGGGAGCATGGGAAAT | 59.232 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
2745 | 2880 | 3.198417 | GTGAAATGGGAGCATGGGAAATT | 59.802 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
2746 | 2881 | 3.198200 | TGAAATGGGAGCATGGGAAATTG | 59.802 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
2747 | 2882 | 1.797320 | ATGGGAGCATGGGAAATTGG | 58.203 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2748 | 2883 | 0.325484 | TGGGAGCATGGGAAATTGGG | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
2749 | 2884 | 0.032217 | GGGAGCATGGGAAATTGGGA | 60.032 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2750 | 2885 | 1.622173 | GGGAGCATGGGAAATTGGGAA | 60.622 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
2755 | 2890 | 2.761809 | CATGGGAAATTGGGAATGGGA | 58.238 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
2801 | 2936 | 6.112927 | TCTGAATTTTAAGGGCTTGCATTT | 57.887 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2826 | 2961 | 0.457166 | CAGAAACACCATGCGGCATG | 60.457 | 55.000 | 31.02 | 31.02 | 41.10 | 4.06 |
2830 | 2965 | 0.525761 | AACACCATGCGGCATGTTAC | 59.474 | 50.000 | 33.70 | 0.00 | 39.94 | 2.50 |
2845 | 2980 | 6.403092 | CGGCATGTTACTCATTGTTCATGTTA | 60.403 | 38.462 | 0.00 | 0.00 | 39.52 | 2.41 |
2895 | 3030 | 4.379339 | CCTTTTCAGGAAAACCGACAAA | 57.621 | 40.909 | 3.19 | 0.00 | 44.19 | 2.83 |
2929 | 3064 | 3.873361 | TGATGCCTCAATCTTTCGATGAC | 59.127 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
2930 | 3065 | 3.333029 | TGCCTCAATCTTTCGATGACA | 57.667 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
2988 | 3123 | 2.449525 | GCGACGATGTTGCGCCTTA | 61.450 | 57.895 | 4.18 | 0.00 | 44.55 | 2.69 |
3007 | 3142 | 3.877801 | GCAATCGCTAACAACTCGG | 57.122 | 52.632 | 0.00 | 0.00 | 34.30 | 4.63 |
3011 | 3146 | 0.179145 | ATCGCTAACAACTCGGACGG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3023 | 3158 | 2.895039 | CGGACGGGTTATTGATCCG | 58.105 | 57.895 | 0.00 | 0.00 | 45.61 | 4.18 |
3024 | 3159 | 0.599204 | CGGACGGGTTATTGATCCGG | 60.599 | 60.000 | 5.05 | 0.00 | 46.77 | 5.14 |
3068 | 3204 | 4.576216 | TGTGCGGTGTTTCATAAAATGT | 57.424 | 36.364 | 0.00 | 0.00 | 0.00 | 2.71 |
3069 | 3205 | 4.541779 | TGTGCGGTGTTTCATAAAATGTC | 58.458 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
3075 | 3211 | 6.611381 | CGGTGTTTCATAAAATGTCTGATGT | 58.389 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3096 | 3232 | 8.642432 | TGATGTTTGGTTTGTTGGATTTGTATA | 58.358 | 29.630 | 0.00 | 0.00 | 0.00 | 1.47 |
3097 | 3233 | 9.651913 | GATGTTTGGTTTGTTGGATTTGTATAT | 57.348 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
3098 | 3234 | 9.651913 | ATGTTTGGTTTGTTGGATTTGTATATC | 57.348 | 29.630 | 0.00 | 0.00 | 0.00 | 1.63 |
3099 | 3235 | 7.810282 | TGTTTGGTTTGTTGGATTTGTATATCG | 59.190 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
3100 | 3236 | 7.689446 | TTGGTTTGTTGGATTTGTATATCGA | 57.311 | 32.000 | 0.00 | 0.00 | 0.00 | 3.59 |
3101 | 3237 | 7.079182 | TGGTTTGTTGGATTTGTATATCGAC | 57.921 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3102 | 3238 | 6.183360 | TGGTTTGTTGGATTTGTATATCGACG | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 5.12 |
3103 | 3239 | 6.036300 | GGTTTGTTGGATTTGTATATCGACGA | 59.964 | 38.462 | 0.00 | 0.00 | 0.00 | 4.20 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
3 | 4 | 9.927668 | CCAGTACTTTGACCATGAAAATATTTT | 57.072 | 29.630 | 13.24 | 13.24 | 0.00 | 1.82 |
4 | 5 | 9.308000 | TCCAGTACTTTGACCATGAAAATATTT | 57.692 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
5 | 6 | 8.877864 | TCCAGTACTTTGACCATGAAAATATT | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
6 | 7 | 8.877864 | TTCCAGTACTTTGACCATGAAAATAT | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
7 | 8 | 8.877864 | ATTCCAGTACTTTGACCATGAAAATA | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
8 | 9 | 7.781324 | ATTCCAGTACTTTGACCATGAAAAT | 57.219 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
9 | 10 | 7.432869 | CAATTCCAGTACTTTGACCATGAAAA | 58.567 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
10 | 11 | 6.516527 | GCAATTCCAGTACTTTGACCATGAAA | 60.517 | 38.462 | 8.83 | 0.00 | 0.00 | 2.69 |
11 | 12 | 5.048083 | GCAATTCCAGTACTTTGACCATGAA | 60.048 | 40.000 | 8.83 | 0.00 | 0.00 | 2.57 |
12 | 13 | 4.458989 | GCAATTCCAGTACTTTGACCATGA | 59.541 | 41.667 | 8.83 | 0.00 | 0.00 | 3.07 |
13 | 14 | 4.380867 | GGCAATTCCAGTACTTTGACCATG | 60.381 | 45.833 | 8.83 | 0.00 | 34.01 | 3.66 |
14 | 15 | 3.763897 | GGCAATTCCAGTACTTTGACCAT | 59.236 | 43.478 | 8.83 | 0.00 | 34.01 | 3.55 |
15 | 16 | 3.153919 | GGCAATTCCAGTACTTTGACCA | 58.846 | 45.455 | 8.83 | 0.00 | 34.01 | 4.02 |
16 | 17 | 3.153919 | TGGCAATTCCAGTACTTTGACC | 58.846 | 45.455 | 8.13 | 9.00 | 40.72 | 4.02 |
28 | 29 | 4.563976 | CAGTTTTTCGATGATGGCAATTCC | 59.436 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
29 | 30 | 5.401550 | TCAGTTTTTCGATGATGGCAATTC | 58.598 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
30 | 31 | 5.389859 | TCAGTTTTTCGATGATGGCAATT | 57.610 | 34.783 | 0.00 | 0.00 | 0.00 | 2.32 |
31 | 32 | 5.389859 | TTCAGTTTTTCGATGATGGCAAT | 57.610 | 34.783 | 0.00 | 0.00 | 0.00 | 3.56 |
32 | 33 | 4.844998 | TTCAGTTTTTCGATGATGGCAA | 57.155 | 36.364 | 0.00 | 0.00 | 0.00 | 4.52 |
33 | 34 | 4.844998 | TTTCAGTTTTTCGATGATGGCA | 57.155 | 36.364 | 0.00 | 0.00 | 0.00 | 4.92 |
34 | 35 | 5.445010 | GCAATTTCAGTTTTTCGATGATGGC | 60.445 | 40.000 | 0.00 | 0.00 | 0.00 | 4.40 |
35 | 36 | 5.062558 | GGCAATTTCAGTTTTTCGATGATGG | 59.937 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
36 | 37 | 5.634439 | TGGCAATTTCAGTTTTTCGATGATG | 59.366 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
37 | 38 | 5.782047 | TGGCAATTTCAGTTTTTCGATGAT | 58.218 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
38 | 39 | 5.193663 | TGGCAATTTCAGTTTTTCGATGA | 57.806 | 34.783 | 0.00 | 0.00 | 0.00 | 2.92 |
39 | 40 | 5.634439 | TCATGGCAATTTCAGTTTTTCGATG | 59.366 | 36.000 | 0.00 | 0.00 | 0.00 | 3.84 |
40 | 41 | 5.782047 | TCATGGCAATTTCAGTTTTTCGAT | 58.218 | 33.333 | 0.00 | 0.00 | 0.00 | 3.59 |
41 | 42 | 5.193663 | TCATGGCAATTTCAGTTTTTCGA | 57.806 | 34.783 | 0.00 | 0.00 | 0.00 | 3.71 |
42 | 43 | 5.865552 | AGATCATGGCAATTTCAGTTTTTCG | 59.134 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
43 | 44 | 7.814107 | TGTAGATCATGGCAATTTCAGTTTTTC | 59.186 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
44 | 45 | 7.669427 | TGTAGATCATGGCAATTTCAGTTTTT | 58.331 | 30.769 | 0.00 | 0.00 | 0.00 | 1.94 |
45 | 46 | 7.230849 | TGTAGATCATGGCAATTTCAGTTTT | 57.769 | 32.000 | 0.00 | 0.00 | 0.00 | 2.43 |
46 | 47 | 6.839124 | TGTAGATCATGGCAATTTCAGTTT | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
47 | 48 | 6.839124 | TTGTAGATCATGGCAATTTCAGTT | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
48 | 49 | 6.435277 | AGTTTGTAGATCATGGCAATTTCAGT | 59.565 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
49 | 50 | 6.860080 | AGTTTGTAGATCATGGCAATTTCAG | 58.140 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
50 | 51 | 6.839124 | AGTTTGTAGATCATGGCAATTTCA | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
51 | 52 | 9.807649 | ATTTAGTTTGTAGATCATGGCAATTTC | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
54 | 55 | 9.590451 | CAAATTTAGTTTGTAGATCATGGCAAT | 57.410 | 29.630 | 0.00 | 0.00 | 41.80 | 3.56 |
55 | 56 | 8.984891 | CAAATTTAGTTTGTAGATCATGGCAA | 57.015 | 30.769 | 0.00 | 0.00 | 41.80 | 4.52 |
81 | 82 | 4.923281 | GCTTAAACTAAAGTTGCCATGTGG | 59.077 | 41.667 | 0.00 | 0.00 | 38.44 | 4.17 |
82 | 83 | 5.402270 | GTGCTTAAACTAAAGTTGCCATGTG | 59.598 | 40.000 | 0.00 | 0.00 | 38.44 | 3.21 |
83 | 84 | 5.301805 | AGTGCTTAAACTAAAGTTGCCATGT | 59.698 | 36.000 | 0.00 | 0.00 | 38.44 | 3.21 |
84 | 85 | 5.772521 | AGTGCTTAAACTAAAGTTGCCATG | 58.227 | 37.500 | 0.00 | 0.00 | 38.44 | 3.66 |
85 | 86 | 7.362920 | CCATAGTGCTTAAACTAAAGTTGCCAT | 60.363 | 37.037 | 0.00 | 0.00 | 38.44 | 4.40 |
86 | 87 | 6.072175 | CCATAGTGCTTAAACTAAAGTTGCCA | 60.072 | 38.462 | 0.00 | 0.00 | 38.44 | 4.92 |
87 | 88 | 6.322491 | CCATAGTGCTTAAACTAAAGTTGCC | 58.678 | 40.000 | 0.00 | 0.00 | 38.44 | 4.52 |
88 | 89 | 5.800438 | GCCATAGTGCTTAAACTAAAGTTGC | 59.200 | 40.000 | 0.00 | 0.00 | 38.44 | 4.17 |
89 | 90 | 6.908825 | TGCCATAGTGCTTAAACTAAAGTTG | 58.091 | 36.000 | 0.00 | 0.00 | 38.44 | 3.16 |
90 | 91 | 7.230712 | AGTTGCCATAGTGCTTAAACTAAAGTT | 59.769 | 33.333 | 0.00 | 0.00 | 40.50 | 2.66 |
91 | 92 | 6.715264 | AGTTGCCATAGTGCTTAAACTAAAGT | 59.285 | 34.615 | 0.00 | 0.00 | 36.28 | 2.66 |
92 | 93 | 7.145932 | AGTTGCCATAGTGCTTAAACTAAAG | 57.854 | 36.000 | 0.00 | 0.00 | 36.28 | 1.85 |
93 | 94 | 7.662258 | TGTAGTTGCCATAGTGCTTAAACTAAA | 59.338 | 33.333 | 0.00 | 0.00 | 36.28 | 1.85 |
94 | 95 | 7.162761 | TGTAGTTGCCATAGTGCTTAAACTAA | 58.837 | 34.615 | 0.00 | 0.00 | 36.28 | 2.24 |
95 | 96 | 6.703319 | TGTAGTTGCCATAGTGCTTAAACTA | 58.297 | 36.000 | 0.00 | 0.00 | 37.08 | 2.24 |
96 | 97 | 5.556915 | TGTAGTTGCCATAGTGCTTAAACT | 58.443 | 37.500 | 0.00 | 0.00 | 32.07 | 2.66 |
97 | 98 | 5.411669 | ACTGTAGTTGCCATAGTGCTTAAAC | 59.588 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
98 | 99 | 5.411361 | CACTGTAGTTGCCATAGTGCTTAAA | 59.589 | 40.000 | 0.00 | 0.00 | 33.28 | 1.52 |
99 | 100 | 4.935205 | CACTGTAGTTGCCATAGTGCTTAA | 59.065 | 41.667 | 0.00 | 0.00 | 33.28 | 1.85 |
100 | 101 | 4.020573 | ACACTGTAGTTGCCATAGTGCTTA | 60.021 | 41.667 | 0.00 | 0.00 | 41.74 | 3.09 |
101 | 102 | 3.244561 | ACACTGTAGTTGCCATAGTGCTT | 60.245 | 43.478 | 0.00 | 0.00 | 41.74 | 3.91 |
102 | 103 | 2.303022 | ACACTGTAGTTGCCATAGTGCT | 59.697 | 45.455 | 0.00 | 0.00 | 41.74 | 4.40 |
103 | 104 | 2.699954 | ACACTGTAGTTGCCATAGTGC | 58.300 | 47.619 | 0.00 | 0.00 | 41.74 | 4.40 |
104 | 105 | 5.699001 | TGTTTACACTGTAGTTGCCATAGTG | 59.301 | 40.000 | 0.00 | 0.00 | 43.20 | 2.74 |
105 | 106 | 5.860611 | TGTTTACACTGTAGTTGCCATAGT | 58.139 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
106 | 107 | 6.985188 | ATGTTTACACTGTAGTTGCCATAG | 57.015 | 37.500 | 0.00 | 0.00 | 0.00 | 2.23 |
107 | 108 | 8.888716 | CATAATGTTTACACTGTAGTTGCCATA | 58.111 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
108 | 109 | 7.148086 | CCATAATGTTTACACTGTAGTTGCCAT | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 4.40 |
109 | 110 | 6.150307 | CCATAATGTTTACACTGTAGTTGCCA | 59.850 | 38.462 | 0.00 | 0.00 | 0.00 | 4.92 |
110 | 111 | 6.551736 | CCATAATGTTTACACTGTAGTTGCC | 58.448 | 40.000 | 0.00 | 0.00 | 0.00 | 4.52 |
111 | 112 | 6.027749 | GCCATAATGTTTACACTGTAGTTGC | 58.972 | 40.000 | 0.00 | 0.00 | 0.00 | 4.17 |
112 | 113 | 7.139896 | TGCCATAATGTTTACACTGTAGTTG | 57.860 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
113 | 114 | 7.447238 | AGTTGCCATAATGTTTACACTGTAGTT | 59.553 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
114 | 115 | 6.940298 | AGTTGCCATAATGTTTACACTGTAGT | 59.060 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
115 | 116 | 7.377766 | AGTTGCCATAATGTTTACACTGTAG | 57.622 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
116 | 117 | 7.753309 | AAGTTGCCATAATGTTTACACTGTA | 57.247 | 32.000 | 0.00 | 0.00 | 0.00 | 2.74 |
117 | 118 | 6.648879 | AAGTTGCCATAATGTTTACACTGT | 57.351 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
118 | 119 | 7.095691 | CCAAAAGTTGCCATAATGTTTACACTG | 60.096 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
119 | 120 | 6.928492 | CCAAAAGTTGCCATAATGTTTACACT | 59.072 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
120 | 121 | 6.147000 | CCCAAAAGTTGCCATAATGTTTACAC | 59.853 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
121 | 122 | 6.183361 | ACCCAAAAGTTGCCATAATGTTTACA | 60.183 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
122 | 123 | 6.227522 | ACCCAAAAGTTGCCATAATGTTTAC | 58.772 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
123 | 124 | 6.426646 | ACCCAAAAGTTGCCATAATGTTTA | 57.573 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
124 | 125 | 5.303259 | ACCCAAAAGTTGCCATAATGTTT | 57.697 | 34.783 | 0.00 | 0.00 | 0.00 | 2.83 |
125 | 126 | 4.972751 | ACCCAAAAGTTGCCATAATGTT | 57.027 | 36.364 | 0.00 | 0.00 | 0.00 | 2.71 |
126 | 127 | 6.426646 | TTTACCCAAAAGTTGCCATAATGT | 57.573 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
127 | 128 | 7.736447 | TTTTTACCCAAAAGTTGCCATAATG | 57.264 | 32.000 | 0.00 | 0.00 | 35.15 | 1.90 |
150 | 151 | 8.849490 | CATGTTGATATGTTTCGACGAATTTTT | 58.151 | 29.630 | 11.71 | 0.03 | 33.42 | 1.94 |
151 | 152 | 8.233868 | TCATGTTGATATGTTTCGACGAATTTT | 58.766 | 29.630 | 11.71 | 1.80 | 33.42 | 1.82 |
152 | 153 | 7.747888 | TCATGTTGATATGTTTCGACGAATTT | 58.252 | 30.769 | 11.71 | 2.15 | 33.42 | 1.82 |
153 | 154 | 7.302350 | TCATGTTGATATGTTTCGACGAATT | 57.698 | 32.000 | 11.71 | 2.51 | 33.42 | 2.17 |
154 | 155 | 6.018751 | CCTCATGTTGATATGTTTCGACGAAT | 60.019 | 38.462 | 11.71 | 0.00 | 33.42 | 3.34 |
155 | 156 | 5.290885 | CCTCATGTTGATATGTTTCGACGAA | 59.709 | 40.000 | 6.10 | 6.10 | 33.42 | 3.85 |
156 | 157 | 4.803613 | CCTCATGTTGATATGTTTCGACGA | 59.196 | 41.667 | 0.00 | 0.00 | 33.42 | 4.20 |
157 | 158 | 4.566759 | ACCTCATGTTGATATGTTTCGACG | 59.433 | 41.667 | 0.00 | 0.00 | 33.42 | 5.12 |
158 | 159 | 5.812642 | AGACCTCATGTTGATATGTTTCGAC | 59.187 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
159 | 160 | 5.977635 | AGACCTCATGTTGATATGTTTCGA | 58.022 | 37.500 | 0.00 | 0.00 | 0.00 | 3.71 |
160 | 161 | 6.980978 | ACTAGACCTCATGTTGATATGTTTCG | 59.019 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
161 | 162 | 8.723942 | AACTAGACCTCATGTTGATATGTTTC | 57.276 | 34.615 | 0.00 | 0.00 | 0.00 | 2.78 |
162 | 163 | 9.520515 | AAAACTAGACCTCATGTTGATATGTTT | 57.479 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
163 | 164 | 8.950210 | CAAAACTAGACCTCATGTTGATATGTT | 58.050 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
164 | 165 | 8.321353 | TCAAAACTAGACCTCATGTTGATATGT | 58.679 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
165 | 166 | 8.722480 | TCAAAACTAGACCTCATGTTGATATG | 57.278 | 34.615 | 0.00 | 0.00 | 0.00 | 1.78 |
166 | 167 | 9.388506 | CTTCAAAACTAGACCTCATGTTGATAT | 57.611 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
167 | 168 | 8.593679 | TCTTCAAAACTAGACCTCATGTTGATA | 58.406 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
168 | 169 | 7.453393 | TCTTCAAAACTAGACCTCATGTTGAT | 58.547 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
169 | 170 | 6.826668 | TCTTCAAAACTAGACCTCATGTTGA | 58.173 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
170 | 171 | 7.605691 | AGATCTTCAAAACTAGACCTCATGTTG | 59.394 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
171 | 172 | 7.684529 | AGATCTTCAAAACTAGACCTCATGTT | 58.315 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
172 | 173 | 7.251321 | AGATCTTCAAAACTAGACCTCATGT | 57.749 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
173 | 174 | 6.475076 | CGAGATCTTCAAAACTAGACCTCATG | 59.525 | 42.308 | 0.00 | 0.00 | 0.00 | 3.07 |
174 | 175 | 6.153680 | ACGAGATCTTCAAAACTAGACCTCAT | 59.846 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
175 | 176 | 5.477291 | ACGAGATCTTCAAAACTAGACCTCA | 59.523 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
176 | 177 | 5.956642 | ACGAGATCTTCAAAACTAGACCTC | 58.043 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
177 | 178 | 5.392165 | CGACGAGATCTTCAAAACTAGACCT | 60.392 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
178 | 179 | 4.794246 | CGACGAGATCTTCAAAACTAGACC | 59.206 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
179 | 180 | 5.629097 | TCGACGAGATCTTCAAAACTAGAC | 58.371 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
180 | 181 | 5.642491 | TCTCGACGAGATCTTCAAAACTAGA | 59.358 | 40.000 | 23.27 | 0.00 | 33.35 | 2.43 |
181 | 182 | 5.735427 | GTCTCGACGAGATCTTCAAAACTAG | 59.265 | 44.000 | 28.81 | 0.00 | 40.98 | 2.57 |
182 | 183 | 5.629097 | GTCTCGACGAGATCTTCAAAACTA | 58.371 | 41.667 | 28.81 | 0.33 | 40.98 | 2.24 |
183 | 184 | 4.477780 | GTCTCGACGAGATCTTCAAAACT | 58.522 | 43.478 | 28.81 | 0.00 | 40.98 | 2.66 |
184 | 185 | 4.809455 | GTCTCGACGAGATCTTCAAAAC | 57.191 | 45.455 | 28.81 | 10.84 | 40.98 | 2.43 |
198 | 199 | 3.777478 | TCACCATTAAATCCGTCTCGAC | 58.223 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
199 | 200 | 4.459390 | TTCACCATTAAATCCGTCTCGA | 57.541 | 40.909 | 0.00 | 0.00 | 0.00 | 4.04 |
200 | 201 | 5.106869 | TGTTTTCACCATTAAATCCGTCTCG | 60.107 | 40.000 | 0.00 | 0.00 | 0.00 | 4.04 |
201 | 202 | 6.148811 | TCTGTTTTCACCATTAAATCCGTCTC | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
202 | 203 | 6.001460 | TCTGTTTTCACCATTAAATCCGTCT | 58.999 | 36.000 | 0.00 | 0.00 | 0.00 | 4.18 |
203 | 204 | 6.249035 | TCTGTTTTCACCATTAAATCCGTC | 57.751 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
204 | 205 | 6.834168 | ATCTGTTTTCACCATTAAATCCGT | 57.166 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
205 | 206 | 8.532977 | AAAATCTGTTTTCACCATTAAATCCG | 57.467 | 30.769 | 0.00 | 0.00 | 32.14 | 4.18 |
212 | 213 | 8.495148 | GCGAATTAAAAATCTGTTTTCACCATT | 58.505 | 29.630 | 0.00 | 0.00 | 36.55 | 3.16 |
213 | 214 | 7.872483 | AGCGAATTAAAAATCTGTTTTCACCAT | 59.128 | 29.630 | 0.00 | 0.00 | 36.55 | 3.55 |
214 | 215 | 7.206687 | AGCGAATTAAAAATCTGTTTTCACCA | 58.793 | 30.769 | 0.00 | 0.00 | 36.55 | 4.17 |
215 | 216 | 7.637709 | AGCGAATTAAAAATCTGTTTTCACC | 57.362 | 32.000 | 0.00 | 0.00 | 36.55 | 4.02 |
216 | 217 | 9.914923 | AAAAGCGAATTAAAAATCTGTTTTCAC | 57.085 | 25.926 | 0.00 | 0.00 | 36.55 | 3.18 |
255 | 256 | 9.449719 | TCTGGTTTTTGGCTTAAAAATGTTTTA | 57.550 | 25.926 | 12.79 | 0.00 | 46.56 | 1.52 |
256 | 257 | 8.341892 | TCTGGTTTTTGGCTTAAAAATGTTTT | 57.658 | 26.923 | 12.79 | 0.00 | 46.56 | 2.43 |
257 | 258 | 7.929941 | TCTGGTTTTTGGCTTAAAAATGTTT | 57.070 | 28.000 | 12.79 | 0.00 | 46.56 | 2.83 |
258 | 259 | 7.929941 | TTCTGGTTTTTGGCTTAAAAATGTT | 57.070 | 28.000 | 12.79 | 0.00 | 46.56 | 2.71 |
259 | 260 | 7.826744 | TCTTTCTGGTTTTTGGCTTAAAAATGT | 59.173 | 29.630 | 12.79 | 0.00 | 46.56 | 2.71 |
260 | 261 | 8.207521 | TCTTTCTGGTTTTTGGCTTAAAAATG | 57.792 | 30.769 | 12.79 | 8.43 | 46.56 | 2.32 |
261 | 262 | 8.978874 | ATCTTTCTGGTTTTTGGCTTAAAAAT | 57.021 | 26.923 | 12.79 | 0.00 | 46.56 | 1.82 |
262 | 263 | 8.800370 | AATCTTTCTGGTTTTTGGCTTAAAAA | 57.200 | 26.923 | 7.68 | 7.68 | 43.88 | 1.94 |
263 | 264 | 8.800370 | AAATCTTTCTGGTTTTTGGCTTAAAA | 57.200 | 26.923 | 0.00 | 0.00 | 36.51 | 1.52 |
264 | 265 | 8.264347 | AGAAATCTTTCTGGTTTTTGGCTTAAA | 58.736 | 29.630 | 4.43 | 0.00 | 45.27 | 1.52 |
265 | 266 | 7.791029 | AGAAATCTTTCTGGTTTTTGGCTTAA | 58.209 | 30.769 | 4.43 | 0.00 | 45.27 | 1.85 |
266 | 267 | 7.360113 | AGAAATCTTTCTGGTTTTTGGCTTA | 57.640 | 32.000 | 4.43 | 0.00 | 45.27 | 3.09 |
267 | 268 | 6.239217 | AGAAATCTTTCTGGTTTTTGGCTT | 57.761 | 33.333 | 4.43 | 0.00 | 45.27 | 4.35 |
268 | 269 | 5.876651 | AGAAATCTTTCTGGTTTTTGGCT | 57.123 | 34.783 | 4.43 | 0.00 | 45.27 | 4.75 |
280 | 281 | 6.093771 | ACAGATGACATCAGCAGAAATCTTTC | 59.906 | 38.462 | 17.57 | 0.00 | 34.14 | 2.62 |
281 | 282 | 5.944599 | ACAGATGACATCAGCAGAAATCTTT | 59.055 | 36.000 | 17.57 | 0.00 | 34.14 | 2.52 |
282 | 283 | 5.498393 | ACAGATGACATCAGCAGAAATCTT | 58.502 | 37.500 | 17.57 | 0.00 | 34.14 | 2.40 |
283 | 284 | 5.100344 | ACAGATGACATCAGCAGAAATCT | 57.900 | 39.130 | 17.57 | 0.00 | 34.14 | 2.40 |
284 | 285 | 5.353400 | TGAACAGATGACATCAGCAGAAATC | 59.647 | 40.000 | 17.57 | 5.04 | 34.14 | 2.17 |
285 | 286 | 5.250982 | TGAACAGATGACATCAGCAGAAAT | 58.749 | 37.500 | 17.57 | 0.00 | 34.14 | 2.17 |
286 | 287 | 4.644498 | TGAACAGATGACATCAGCAGAAA | 58.356 | 39.130 | 17.57 | 0.00 | 34.14 | 2.52 |
287 | 288 | 4.276058 | TGAACAGATGACATCAGCAGAA | 57.724 | 40.909 | 17.57 | 0.00 | 34.14 | 3.02 |
288 | 289 | 3.967332 | TGAACAGATGACATCAGCAGA | 57.033 | 42.857 | 17.57 | 0.00 | 34.14 | 4.26 |
289 | 290 | 4.208666 | CGTATGAACAGATGACATCAGCAG | 59.791 | 45.833 | 17.57 | 6.89 | 34.14 | 4.24 |
290 | 291 | 4.114794 | CGTATGAACAGATGACATCAGCA | 58.885 | 43.478 | 17.57 | 9.50 | 34.14 | 4.41 |
291 | 292 | 4.026228 | CACGTATGAACAGATGACATCAGC | 60.026 | 45.833 | 17.57 | 4.42 | 0.00 | 4.26 |
292 | 293 | 4.505556 | CCACGTATGAACAGATGACATCAG | 59.494 | 45.833 | 17.57 | 11.95 | 0.00 | 2.90 |
293 | 294 | 4.432712 | CCACGTATGAACAGATGACATCA | 58.567 | 43.478 | 17.57 | 0.00 | 0.00 | 3.07 |
294 | 295 | 3.246226 | GCCACGTATGAACAGATGACATC | 59.754 | 47.826 | 7.39 | 7.39 | 0.00 | 3.06 |
295 | 296 | 3.198068 | GCCACGTATGAACAGATGACAT | 58.802 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
296 | 297 | 2.028567 | TGCCACGTATGAACAGATGACA | 60.029 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
297 | 298 | 2.616960 | TGCCACGTATGAACAGATGAC | 58.383 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
298 | 299 | 3.326836 | TTGCCACGTATGAACAGATGA | 57.673 | 42.857 | 0.00 | 0.00 | 0.00 | 2.92 |
299 | 300 | 4.418013 | TTTTGCCACGTATGAACAGATG | 57.582 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
300 | 301 | 4.699735 | TCATTTTGCCACGTATGAACAGAT | 59.300 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
301 | 302 | 4.068599 | TCATTTTGCCACGTATGAACAGA | 58.931 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
302 | 303 | 4.083324 | ACTCATTTTGCCACGTATGAACAG | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
303 | 304 | 3.818210 | ACTCATTTTGCCACGTATGAACA | 59.182 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
304 | 305 | 4.158384 | CACTCATTTTGCCACGTATGAAC | 58.842 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
305 | 306 | 3.190327 | CCACTCATTTTGCCACGTATGAA | 59.810 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
306 | 307 | 2.746904 | CCACTCATTTTGCCACGTATGA | 59.253 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
307 | 308 | 2.487762 | ACCACTCATTTTGCCACGTATG | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
308 | 309 | 2.487762 | CACCACTCATTTTGCCACGTAT | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
309 | 310 | 1.876799 | CACCACTCATTTTGCCACGTA | 59.123 | 47.619 | 0.00 | 0.00 | 0.00 | 3.57 |
310 | 311 | 0.667993 | CACCACTCATTTTGCCACGT | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
311 | 312 | 0.950836 | TCACCACTCATTTTGCCACG | 59.049 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
312 | 313 | 2.353011 | CCATCACCACTCATTTTGCCAC | 60.353 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
313 | 314 | 1.894466 | CCATCACCACTCATTTTGCCA | 59.106 | 47.619 | 0.00 | 0.00 | 0.00 | 4.92 |
314 | 315 | 2.165030 | CTCCATCACCACTCATTTTGCC | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
315 | 316 | 2.165030 | CCTCCATCACCACTCATTTTGC | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
316 | 317 | 2.165030 | GCCTCCATCACCACTCATTTTG | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
317 | 318 | 2.450476 | GCCTCCATCACCACTCATTTT | 58.550 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
318 | 319 | 1.679944 | CGCCTCCATCACCACTCATTT | 60.680 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
319 | 320 | 0.107508 | CGCCTCCATCACCACTCATT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
320 | 321 | 1.267574 | ACGCCTCCATCACCACTCAT | 61.268 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
321 | 322 | 1.913262 | ACGCCTCCATCACCACTCA | 60.913 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
322 | 323 | 1.448540 | CACGCCTCCATCACCACTC | 60.449 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
323 | 324 | 2.217038 | ACACGCCTCCATCACCACT | 61.217 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
324 | 325 | 2.034879 | CACACGCCTCCATCACCAC | 61.035 | 63.158 | 0.00 | 0.00 | 0.00 | 4.16 |
325 | 326 | 2.347114 | CACACGCCTCCATCACCA | 59.653 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
326 | 327 | 2.436646 | CCACACGCCTCCATCACC | 60.437 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
327 | 328 | 2.436646 | CCCACACGCCTCCATCAC | 60.437 | 66.667 | 0.00 | 0.00 | 0.00 | 3.06 |
328 | 329 | 4.408821 | GCCCACACGCCTCCATCA | 62.409 | 66.667 | 0.00 | 0.00 | 0.00 | 3.07 |
333 | 334 | 3.365291 | TACATCGCCCACACGCCTC | 62.365 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
334 | 335 | 3.387091 | TACATCGCCCACACGCCT | 61.387 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
335 | 336 | 3.192922 | GTACATCGCCCACACGCC | 61.193 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
336 | 337 | 1.570347 | TTTGTACATCGCCCACACGC | 61.570 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
337 | 338 | 1.083489 | ATTTGTACATCGCCCACACG | 58.917 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
338 | 339 | 1.467374 | GCATTTGTACATCGCCCACAC | 60.467 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
339 | 340 | 0.808125 | GCATTTGTACATCGCCCACA | 59.192 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
340 | 341 | 0.100503 | GGCATTTGTACATCGCCCAC | 59.899 | 55.000 | 16.18 | 0.00 | 36.73 | 4.61 |
341 | 342 | 2.487918 | GGCATTTGTACATCGCCCA | 58.512 | 52.632 | 16.18 | 0.00 | 36.73 | 5.36 |
343 | 344 | 0.100503 | GTGGGCATTTGTACATCGCC | 59.899 | 55.000 | 17.95 | 17.95 | 42.21 | 5.54 |
344 | 345 | 0.808125 | TGTGGGCATTTGTACATCGC | 59.192 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
345 | 346 | 1.202020 | CGTGTGGGCATTTGTACATCG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 3.84 |
346 | 347 | 1.810151 | ACGTGTGGGCATTTGTACATC | 59.190 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
347 | 348 | 1.539388 | CACGTGTGGGCATTTGTACAT | 59.461 | 47.619 | 7.58 | 0.00 | 0.00 | 2.29 |
348 | 349 | 0.947960 | CACGTGTGGGCATTTGTACA | 59.052 | 50.000 | 7.58 | 0.00 | 0.00 | 2.90 |
349 | 350 | 0.948678 | ACACGTGTGGGCATTTGTAC | 59.051 | 50.000 | 22.71 | 0.00 | 34.19 | 2.90 |
350 | 351 | 0.947960 | CACACGTGTGGGCATTTGTA | 59.052 | 50.000 | 35.65 | 0.00 | 42.10 | 2.41 |
351 | 352 | 1.732917 | CACACGTGTGGGCATTTGT | 59.267 | 52.632 | 35.65 | 1.12 | 42.10 | 2.83 |
352 | 353 | 4.632037 | CACACGTGTGGGCATTTG | 57.368 | 55.556 | 35.65 | 12.14 | 42.10 | 2.32 |
364 | 365 | 1.129811 | GGAAAATCTAACGCCCACACG | 59.870 | 52.381 | 0.00 | 0.00 | 39.50 | 4.49 |
365 | 366 | 1.129811 | CGGAAAATCTAACGCCCACAC | 59.870 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
366 | 367 | 1.002201 | TCGGAAAATCTAACGCCCACA | 59.998 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
367 | 368 | 1.729284 | TCGGAAAATCTAACGCCCAC | 58.271 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
368 | 369 | 2.078392 | GTTCGGAAAATCTAACGCCCA | 58.922 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
369 | 370 | 2.078392 | TGTTCGGAAAATCTAACGCCC | 58.922 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
370 | 371 | 3.817148 | TTGTTCGGAAAATCTAACGCC | 57.183 | 42.857 | 0.00 | 0.00 | 0.00 | 5.68 |
392 | 393 | 5.594317 | CCGGGACTAAATGAAATGGATCTTT | 59.406 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
409 | 410 | 1.303317 | ATTGCGCTTTTCCGGGACT | 60.303 | 52.632 | 9.73 | 0.00 | 0.00 | 3.85 |
410 | 411 | 1.136774 | GATTGCGCTTTTCCGGGAC | 59.863 | 57.895 | 9.73 | 0.00 | 0.00 | 4.46 |
435 | 436 | 2.534042 | TTGAGTGGTTGGGGAAAACA | 57.466 | 45.000 | 0.00 | 0.00 | 31.20 | 2.83 |
436 | 437 | 3.897141 | TTTTGAGTGGTTGGGGAAAAC | 57.103 | 42.857 | 0.00 | 0.00 | 0.00 | 2.43 |
487 | 491 | 1.977854 | TGTTCTCTGCAGCCCTTTCTA | 59.022 | 47.619 | 9.47 | 0.00 | 0.00 | 2.10 |
591 | 595 | 3.065371 | CCGTTGTTAATCAGGAAGGATGC | 59.935 | 47.826 | 0.00 | 0.00 | 0.00 | 3.91 |
594 | 598 | 3.618997 | GCTCCGTTGTTAATCAGGAAGGA | 60.619 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
595 | 599 | 2.678336 | GCTCCGTTGTTAATCAGGAAGG | 59.322 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
596 | 600 | 3.334691 | TGCTCCGTTGTTAATCAGGAAG | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
597 | 601 | 3.334691 | CTGCTCCGTTGTTAATCAGGAA | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
942 | 962 | 1.446272 | CTTCGACTTGCCCGAGTCC | 60.446 | 63.158 | 9.50 | 0.00 | 42.41 | 3.85 |
946 | 966 | 1.068055 | GTTCTACTTCGACTTGCCCGA | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
952 | 972 | 1.884579 | TCGCCTGTTCTACTTCGACTT | 59.115 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
954 | 974 | 1.897641 | CTCGCCTGTTCTACTTCGAC | 58.102 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
968 | 988 | 2.125753 | CAGACCACTCTGCTCGCC | 60.126 | 66.667 | 0.00 | 0.00 | 37.72 | 5.54 |
994 | 1014 | 3.311110 | GCCTCGCCCCATATCGGA | 61.311 | 66.667 | 0.00 | 0.00 | 36.56 | 4.55 |
1272 | 1293 | 3.014856 | GCAGATTAACGGCGAGCC | 58.985 | 61.111 | 16.62 | 3.59 | 0.00 | 4.70 |
1277 | 1298 | 0.098728 | AATGCACGCAGATTAACGGC | 59.901 | 50.000 | 0.00 | 0.00 | 36.41 | 5.68 |
1278 | 1299 | 1.592110 | CGAATGCACGCAGATTAACGG | 60.592 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
1279 | 1300 | 1.592110 | CCGAATGCACGCAGATTAACG | 60.592 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
1280 | 1301 | 1.396996 | ACCGAATGCACGCAGATTAAC | 59.603 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
1281 | 1302 | 1.732941 | ACCGAATGCACGCAGATTAA | 58.267 | 45.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1286 | 1307 | 2.480555 | GGAACCGAATGCACGCAG | 59.519 | 61.111 | 0.00 | 0.00 | 0.00 | 5.18 |
1313 | 1334 | 6.088483 | CAGAACACACCAAAATCAATCAATCG | 59.912 | 38.462 | 0.00 | 0.00 | 0.00 | 3.34 |
1550 | 1600 | 2.892425 | CGTTGGATCCCTCGCTGC | 60.892 | 66.667 | 9.90 | 0.00 | 0.00 | 5.25 |
1843 | 1893 | 2.433491 | TTGTTGTAGGCGCGCGAT | 60.433 | 55.556 | 37.18 | 23.62 | 0.00 | 4.58 |
1898 | 1948 | 2.300437 | CACTCGTTTCCCTCCTCTTCTT | 59.700 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1899 | 1949 | 1.896465 | CACTCGTTTCCCTCCTCTTCT | 59.104 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
1902 | 1952 | 0.178929 | ACCACTCGTTTCCCTCCTCT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1927 | 1977 | 2.100584 | CGAGTTCCTTCTCCAGATCCTG | 59.899 | 54.545 | 0.00 | 0.00 | 0.00 | 3.86 |
1933 | 1983 | 1.219393 | GGCCGAGTTCCTTCTCCAG | 59.781 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
2059 | 2109 | 1.219124 | CCGATCTGGACTGTGGGTG | 59.781 | 63.158 | 0.00 | 0.00 | 42.00 | 4.61 |
2134 | 2184 | 2.276201 | TGTAATGTTTGATCTCGGGCG | 58.724 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
2137 | 2187 | 5.411361 | TCCAAGTTGTAATGTTTGATCTCGG | 59.589 | 40.000 | 1.45 | 0.00 | 0.00 | 4.63 |
2209 | 2297 | 7.546316 | TCATTCCTTCAATTTGTATGTGCATTG | 59.454 | 33.333 | 0.00 | 0.00 | 0.00 | 2.82 |
2247 | 2335 | 1.933853 | CGTGCTACTTGGCCTTGTATC | 59.066 | 52.381 | 3.32 | 3.55 | 0.00 | 2.24 |
2286 | 2374 | 9.268268 | CACAGTACATTTGGTTAAACTCTTAGA | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
2288 | 2376 | 7.040961 | GCCACAGTACATTTGGTTAAACTCTTA | 60.041 | 37.037 | 8.67 | 0.00 | 32.50 | 2.10 |
2289 | 2377 | 6.238925 | GCCACAGTACATTTGGTTAAACTCTT | 60.239 | 38.462 | 8.67 | 0.00 | 32.50 | 2.85 |
2291 | 2379 | 5.009210 | TGCCACAGTACATTTGGTTAAACTC | 59.991 | 40.000 | 8.67 | 0.00 | 32.50 | 3.01 |
2292 | 2380 | 4.890581 | TGCCACAGTACATTTGGTTAAACT | 59.109 | 37.500 | 8.67 | 0.00 | 32.50 | 2.66 |
2293 | 2381 | 5.189659 | TGCCACAGTACATTTGGTTAAAC | 57.810 | 39.130 | 8.67 | 0.00 | 32.50 | 2.01 |
2336 | 2462 | 2.369860 | ACTTCTCACTGGCTGTTGATCA | 59.630 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
2526 | 2655 | 5.415701 | GGTGATGATTCTTCAAAAGGCACTA | 59.584 | 40.000 | 4.00 | 0.00 | 33.60 | 2.74 |
2527 | 2656 | 4.219288 | GGTGATGATTCTTCAAAAGGCACT | 59.781 | 41.667 | 4.00 | 0.00 | 35.91 | 4.40 |
2528 | 2657 | 4.488879 | GGTGATGATTCTTCAAAAGGCAC | 58.511 | 43.478 | 4.00 | 0.00 | 34.96 | 5.01 |
2743 | 2878 | 4.659835 | CCAAAATATGGTCCCATTCCCAAT | 59.340 | 41.667 | 3.76 | 0.00 | 44.85 | 3.16 |
2744 | 2879 | 4.036518 | CCAAAATATGGTCCCATTCCCAA | 58.963 | 43.478 | 3.76 | 0.00 | 44.85 | 4.12 |
2745 | 2880 | 3.652055 | CCAAAATATGGTCCCATTCCCA | 58.348 | 45.455 | 3.76 | 0.00 | 44.85 | 4.37 |
2801 | 2936 | 2.293122 | CCGCATGGTGTTTCTGAAAAGA | 59.707 | 45.455 | 4.09 | 0.00 | 0.00 | 2.52 |
2819 | 2954 | 2.161410 | TGAACAATGAGTAACATGCCGC | 59.839 | 45.455 | 0.00 | 0.00 | 39.39 | 6.53 |
2895 | 3030 | 3.877559 | TGAGGCATCAGTTGAATCGAAT | 58.122 | 40.909 | 0.00 | 0.00 | 0.00 | 3.34 |
2905 | 3040 | 3.616956 | TCGAAAGATTGAGGCATCAGT | 57.383 | 42.857 | 0.00 | 0.00 | 33.42 | 3.41 |
2930 | 3065 | 4.940654 | CCACCCAAATTGACAAAGTGTTTT | 59.059 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
3007 | 3142 | 1.578583 | CACCGGATCAATAACCCGTC | 58.421 | 55.000 | 9.46 | 0.00 | 41.53 | 4.79 |
3011 | 3146 | 2.021457 | CCAACCACCGGATCAATAACC | 58.979 | 52.381 | 9.46 | 0.00 | 0.00 | 2.85 |
3023 | 3158 | 0.036294 | GTGAGTCCTAGCCAACCACC | 60.036 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3024 | 3159 | 0.389948 | CGTGAGTCCTAGCCAACCAC | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3068 | 3204 | 5.867903 | AATCCAACAAACCAAACATCAGA | 57.132 | 34.783 | 0.00 | 0.00 | 0.00 | 3.27 |
3069 | 3205 | 5.816777 | ACAAATCCAACAAACCAAACATCAG | 59.183 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3075 | 3211 | 8.024285 | GTCGATATACAAATCCAACAAACCAAA | 58.976 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.