>input_sequence_60593
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------------------------------------------------------------ATGGGGCGAGGCAGGGCACC
GTGCTGCGCCAAGGTCGGGCTCAACAGGGGCTCCTGGACGCCGCAGGAGGACATGCGCCTCATCGCCTACATCCAGAAGC
ACGGCCACGCCAACTGGCGCGCCCTCCCGAGGCAGGCGGGCCTGCTGCGCTGCGGGAAGAGCTGCCGGCTCCGGTGGATC
AACTACCTGCGCCCCGACCTCCGGCGCGGCAACTTCACCGCCGAGGAGGAGGCCACCGTCATCAAGCTGCACGCCTTGCT
CGGCAACAAGTAGGCTCGCCGTTAATCTGCGTGCATTCGGTTCCGAGATTGATCGATTGATTGATTTTGGT---------
--------------------GTGTTCTGATCGGATTTTGTTATTTGTCCAGGTGGTCCAAGATCGCGGCGTGCCTGCCCG
GGAGGACGGACAACGAGATCAAGAACGTCTGGAACACGCACCTGAAGAAGAGGGCGTCGGAGCAGAAGCCAGGCGTTGGC
GAGAGCAAGGGCGAGGCGGCCGACGGAGACCCCGACACGCCCGTCCCTTCGTTGTCTTCGGCGTCCTCGTCGATGACGAG
CAGCGAGGGATCCAACGGCGGCGCCGGGGAGCAGTGCGGCACGAGCAACGAGCCCGAGACGATGGACGTACCATCCCCTC
TCGAGCTGGAGCTCGAGCCAGTCATGGACATCCTGGACATGCTGGCCGACGCGCCCACGGAGGCGCTCGCGACGGCGGCG
CCAATGCCAACGTCTTCGTGCTCGTCGTCCTCCCTGACGACGTGCGCCGGGGGCGGCGGCGGGGTGGAGGAGCTGCTCGA
GCTGCCGGACATCGACATGGACGCTGACATCTGGAGCATCATCGATGACGATATCGCGCGCCTACAACAAGGCGATGCAA
CAGTGCCATGTACGACCAAGGCCAGCCAAGAAGAGGAGGGAAACGAGTGGTGGTTGCAGGATCTGGAGAAGGAACTCGGC
CTGTGGGGGCCCACGGAGGAATCCCAGCCCCAGGCGGGCCCACACGACCAGATAGGCTACCCGGGCCAACTCTCCGAAAC
GGAGGGGGACATGGTGATGGTATCCTCCCACCCACAGTCCAGATCGGATCATGAGGCGTCCAATTCTGAATAG-------
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---------------------------------------
>chr6D_1_TraesCS6D01G249200
CAAAAAATATTTTCATGGTCAAAGTACTGGAATTGCCATCATCGAAAAACTGAAATTGCCATGATCTACAAACTAAATTT
GCCACATGGCAACTTTAGTTTAAGCACTATGGCAACTACAGTGTAAACATTATGGCAACTTTTGGGTAAAAAAAATTCGT
CGAAACATATCAACATGAGGTCTAGTTTTGAAGATCTCGTCGAGACGGATTTAATGGTGAAAACAGATTTTTAATTCGCT
TTTTTAATTAGGAGATAAAACATTTTTAAGCCAAAAACCAGAAAGATTTCTGCTGATGTCATCTGTTCATACGTGGCAAA
ATGAGTGGTGATGGAGGCGTGTGGGCGATGTACAAATGCCCACACGTGTGGGCGTTAGATTTTCCGAACAAAAAAGATCC
ATTTCATTTAGTCCCGGAAAAGCGCAATCATCTCTTGTTTTCCCC--AACCACT-CAAAAAAGGGCCCTCAAACTTTTTT
CTGGCCCGGGTAGAAAGGGCTGCAGAGAACATCATCGTGATTTAGTGATTTTTAAGCAAGTGTACGTGTAAGCTCTCTCG
CTGGGCGCATGCGCTGCCCGTCAGTGCTGAGTGCGCATCCTTCCTGATTAACAACGGAGCAGCAGGGAGGAGTAGACCCT
GCATCGCATCATGGATCCCGGAGGAAACCC----GGGCCACGAACGGATGGGCGGCCGGCCCCAGGAGATGGA-------
--GGACATTTTGCTCTCCTGGGACAGGGGTTTGGTAGGTAAACGCAATAGTCTCGGAGGTAGGAGGATAGAG---GTACG
TAGGGCCTCCCAACTCCTGGGCTTGTCACCTGTCGCCCCAGCGCCAGCCCTGCCACCAGTAAGTAGTAGGAGTGGTTGCG
TCAGTGCGAGCGTGCGCGGCGCACATATATACCGGCCGTGCCCGCCCCCGATCCATGCTCTGCACCGTCCCACCACCTCC
TGGACTCGGGCAAGTCGAAGTAGAACAGGCGAGCAGAGTGGTCTGGTCAGGTGTCCGAT-ATGGGGCGAGGCAGGGCACC
GTGCTGCGCCAAGGTCGGGCTCAACAGGGGCTCCTGGACGCCGCAGGAGGACATGCGCCTCATCGCCTACATCCAGAAGC
ACGGCCACGCCAACTGGCGCGCCCTCCCGAGGCAGGCGGGCCTGCTGCGCTGCGGGAAGAGCTGCCGGCTCCGGTGGATC
AACTACCTGCGCCCCGACCTCCGGCGCGGCAACTTCACCGCCGAGGAGGAGGCCACCGTCATCAAGCTGCACGCCTTGCT
CGGCAACAAGTAGGCTCGCCGTTAATCTGCGTGCATTCGGTTCCGAGATTGATCGATTGATTGATTTTGGT---------
--------------------GTGTTCTGATCGGATTTTGTTATTTGTCCAGGTGGTCCAAGATCGCGGCGTGCCTGCCCG
GGAGGACGGACAACGAGATCAAGAACGTCTGGAACACGCACCTGAAGAAGAGGGCGTCGGAGCAGAAGCCAGGCGTTGGC
GAGAGCAAGGGCGAGGCGGCCGACGGAGACCCCGACACGCCCGTCCCTTCGTTGTCTTCGGCGTCCTCGTCGATGACGAG
CAGCGAGGGATCCAACGGCGGCGCCGGGGAGCAGTGCGGCACGAGCAACGAGCCCGAGACGATGGACGTACCATCCCCTC
TCGAGCTGGAGCTCGAGCCAGTCATGGACATCCTGGACATGCTGGCCGACGCGCCCACGGAGGCGCTCGCGACGGCGGCG
CCAATGCCAACGTCTTCGTGCTCGTCGTCCTCCCTGACGACGTGCGCCGGGGGCGGCGGCGGGGTGGAGGAGCTGCTCGA
GCTGCCGGACATCGACATGGACGCTGACATCTGGAGCATCATCGATGACGATATCGCGCGCCTACAACAAGGCGATGCAA
CAGTGCCATGTACGACCAAGGCCAGCCAAGAAGAGGAGGGAAACGAGTGGTGGTTGCAGGATCTGGAGAAGGAACTCGGC
CTGTGGGGGCCCACGGAGGAATCCCAGCCCCAGGCGGGCCCACACGACCAGATAGGCTACCCGGGCCAACTCTCCGAAAC
GGAGGGGGACATGGTGATGGTATCCTCCCACCCACAGTCCAGATCGGATCATGAGGCGTCCAATTCTGAATAGAAGGTTG
AGATCCACGGTGGTCCCATCGGACGCCCGAGATCAAACATTACAACTTGGAGAAGTTTTTAACGAAACGTTTGAGTTGCA
TATTTGATTTCAT---TGT-----------------------------------TACAATGCACATACAAATTGAAGGAA
TGAAAAGTTAGGTCGATACAAGGCCAAGTAGCACGAGTACCTCTACTATCCTATCTAAGAG-------------------
----------------TTTAACCAAATGTACTGTGGCATGTA---TGCAACAGCACTCCACTGATCAACAGCCAGTGAGA
AGTGGTATGCAAACATGCGTACGGATGTAGTATGTCATTTGATTAATTTCGTACTAGTAGTTCGTAGTAAAAAATTGCGA
CTAATTTGTACCATGCATAT---ATATGCTGCACAGCGTCATGGTGACGTAAGAGCTGGATCATCCGATGGCCCACCACT
ACTACCACCATCATTAGTGCCTTTTGAAGAA-TCATCACCGGGCTTTGATTATGCATTCTAAAGCAACTTGCTTTTGCTA
ATGCGATGTAACCTTTTTCTTCTCCTTTAGCTGGCTTTTATTTTATTTTAT-----TTCTTTAGATTTGATTGCATGTTG
CTTCGGGTGAGCAAAATCACATGAAACTTGATGATAGAGAAGTTGGTCACCTAAGCAGTGAAATGGGAGCATGGGAAATT
GGGAATGGGACCATATTTTGGTGGTGTTGAGTTCTGAATTTTAAGGGCTTGCATTTCTTTTCAGAAACACCATGCGGCAT
GTTACTCATTGTTCATGTTAATTTCTTTTTCCTTTTTTGAGATCCACTCCTTTTCAGGAAAACCGACAAATTCGATTCAA
CTGATGCCTCAATCTTTCGATGACAAAACACTTTGTCAATTTGGGTGGAAACAACTTTGGTGATGCGACGATGTTGCGCC
TTAGCAATCGCTAACAACTCGGACGGGTTATTGATCCGGTGGTTGGCTAGGACTCACGGG-TTGTGCGGTGTTTCATAAA
ATGTCTGATGTTTGGTTTGTTGGATTTGTATATCGACGA
>chr6A_387
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------------------------------------------------------------------AACAAATAAGATCC
ATTTCATTTTATCCCGGAAAAGCGCAATCATCTCTAATTTTTCCCCCAACCACT-CCAAAAAGTGGCCTCAAACTTTTTT
CTGGCCCGG-----------------GAACATCATCGTGATTTAGTGATTTTTAAGCAAGTGTACGTGTAGG----CTCG
CTCGGTGCATGCACTGCCCATCAGTGCTGAGTGCACA----TCCTGATTAACAACGGAGCAGCAGGGAGGAGTAGACCCT
GCATCGCATCATGGATCCCGGAGGAAGGAGACCTGGGCCACCAACGGGTGGGCGGCCGGCCCCAGGAGATGGA-------
--GGGCACTTTGCTCTCCTGGGACAGGGGTTTGGTAGGTAAACGCAATAGTCTCGGAGGTAGGAGGATAGAG---GTACG
TAGGGCCTCCCAACTCCTGGGCTTGTCACCTGTCGCCCCAGCGCCAGCCCTGCCACCAGTAAGTAGTAGGAGTGGTTGCG
TCAGTGCGAGCGTGCGCGGCGCACATATATACCGGCCGTGCCCGCCCCCGATCCATGCTCTGCACCGTCCCACCACCTCC
TCGTCCCGGGCGAATCGAGGTAGAACGAGCGAGCAGAGTGGTCTGGTGAGGTGGCCGATTATGGGGCGAGGCAGGGCACC
GTGCTGCGCCAAGGTCGGGCTCAACAGGGGCTCCTGGACGCCGCAGGAGGACATGCGCCTCATCGCCTACATCCAGAAGC
ACGGCCACGCCAACTGGCGCGCCCTCCCGAGGCAGGCCGGCCTGCTCCGCTGCGGGAAGAGCTGCCGGCTCCGGTGGATC
AACTACCTGCGCCCCGACCTCAGGCGCGGCAACTTCACCGCCGAGGAGGAGGCCACCGTCATCAAGCTGCACGCCTTGCT
CGGCAACAAGTAAGCT------TAGCTTGCGTGCATTCGGTTCCGAGATTGATTGATTGATTGA-TTTGGT---------
--------------------GTGTTCTGATCGGATTTTGTTATTTGTCCAGGTGGTCCAAGATCGCGGCGTGCCTGCCCG
GGAGGACGGACAACGAGATCAAGAACGTCTGGAACACGCACCTGAAGAAGAAGGCGTCGGAGCAGAAGCCAGGCGTCGGC
GGGAGCAAGGGCGAGCCGGCCGACGGAGACCCCGACACGCCCGTCCCCTCGTTGTCTTCGGCGTCCTCGTCGATGACGAC
AAGCGAGGGGTCCAACGGCGGCGCCGGGGAGCAGTGCGGCACGAGCAACGAGCCCGAAACGATGGACGTACCGTCGCCTC
TCGAGCTGGAGCTCGAGCCGGTCATGGACATCCTGGGCATGCTGGCCGACGCGCCCACGGAGGCGCTCGCGACGGCGGCG
CCAATGCCAACGTCTTCGTGCTCGTCGTCCTCCCCGACGACGTGCGCCGGGGGCGGCGGCGGGGTGGAGGAGCTGCTCGA
GCTGCCGGACATCGACATGGACGCCGACATCTGGAGCATCATCGATGACGATGTCGCGCGCCTACAACAAGGCGATGCAA
CAGTGCCATGTACGACCAAGGCCAGCCCGGAGGAGGAGGGAAACGAGTGGTGGTTGGCGGATTTGGAGAAGGAACTCGGC
CTGTGGGGGCCCACGGAGGAATCCCAGCCCCAGGCGGGCCCACACGACCAGATAGGCTACCCGGGCCAGGACAT------
------GGAAATGGTGATGTCCTCCTCCTACCCGCAGTCCAGATCGGATCATGAGGCGTCCAATTCTGAATAGAAGGCTG
GGATCCACGGCGGTCCCATCGGATGCACGAGATCAAACATTACAACTTGGAGAAGTTTTTAACGAAACGTTTGAGTTGCC
TATTTGATGTCATTGATGA-----------------------------------TAGAATGCACATACAAATTAAAGGAA
TGAAAATTTAGGTCAATACAAGGCCAAGTAACACGAGTATCATCTAGATACATCCATACCTGCGACAGGTAATTCGGAAC
GAAGGAAGTAACAGTTTTTAACCAAATGTACCATGGCATGTA---TGCAACAGCACTCCATGGTTCAACAGCCAGCGAGA
AGTGCTATGCAAACATGCGTACCGATGTTGTATGTCATTTGGTTACTAC---------AGTTCGTAATAAGAAATTGCAA
CTAATTTGTACTGTACCATGCACATATACTGCACAGCGTCATGGTGACGTAAGGGCTGGATCATCCCATGGCCCACCACT
ACCACG-CCATCATGTATGCCTTTTGAAGAAATCATCACCGGGCTCTGATTATGCATTCTAAAGCAACTTGCTTTTGCTA
ATGCGATGTGGCCTTTTTCTTCTCCTTTAGCTTGCTTTTATTTTATTTTAT-----TTCTTTGGATTTGATTGCGTGTTG
CTTCGGGTGAGCAAAATCACATGAAACTTGATGATAGAGAAGTTGGTCACCTAAGCAGTGAAATGGGAGCATGGGAA---
-----TGGGGCCATATTTTGGTGGTGACGCGTTCTGAATTTTAAGGGCCCGCATTCCTTTTCAGAAGCATCATACGGCAT
ATTAGTCATTGTTCATGTTGTTTTTTTC-TCTTTTTCTGAGATCCACTCCTTTTTGGGAAAACCGACAA-TTCGATTCAG
CTCGTGCCTCAAACTTTCGATGAT-AAACACTTTGTCAATTTGGGTGAAAACAACTTTGGTGATGCGACGATGTTGCGCC
TTGGCAATCGCTAACAACTCGAACGAGTTATTGATCCAATGGTTGGCTAGGACTCACGGGTTTGTGCGGTGTTTCATAAA
ATGGTTGATGCTTGGTTTGTTGGATTTGTATCGACGA--
>chr6B_387
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------------------------------------------------------------------AACAAATAAGATCC
ATTTCATTTTATCCTGGAAAAGCGCAATCATCTCTAATTGTCCCC--AACCACTCCAAAAAAGTGCCCTCAAACTTTTTT
CTGGCCCGGGGAGAAAGGGCTGCAGAGAACATCATCGTGATTTAGTGATTTTTAAGCAAGTGTACGTGTAAG----CTCG
CTCGGTGCATGCACTGCCCGTCAGTGCTGAGTGCACA----TCCTGATTAACAACAGAGCAGCAGGGAGGAGTAGACCCT
GCATCGCATCATGGATCCCGGAGGAAACCC----GGGCCACGAACGGATGGGCGGCCGGCCCCAGGAGATGGCGGGAGGG
ATGGACATTTTGCTCTCCTGGGACAGGGGTTTGGTAGGTAAACGCAATAGTCTGGGAGGTAGGAGGATAGAGCCGGTACG
TAGGGCCTCCCAACTCGTGGGCTTGTCACCTGTCGCCCCAGCGCGAGCCCTGCCACCAGTAAGTAGGAGTAGTAGTTGCG
TCAGTGCGAGCGTGCGCGACGCACATATATACCGGCCGCGCCCGGCCCCGATCCATGCTCTGCACCGTGCCACCACCTCC
TCGACCCGGGCCAATCGAACTAGAACAAGCGAGCAGAGTGGTCTGGTCGGGTGGCCGAT-ATGGGGCGAGGCAGGGCACC
GTGCTGCGCCAAGGTCGGGCTGAACAGGGGCTCCTGGACGCCGCAGGAGGACATGCGCCTCATCGCCTACATCCAGAAGC
ACGGGCACGCCAACTGGCGCGCCCTCCCGAGGCAGGCCGGCCTGCTGCGCTGCGGGAAGAGCTGCCGGCTCCGGTGGATC
AACTACCTGCGCCCCGACCTCAGGCGCGGCAACTTCACCGCCGAGGAGGAGGCCACCGTCATCAAGCTGCACGCCTTGCT
CGGCAACAAGTAAGCT------TGATTTGCCTGCATTCGGTTCGGCAATCAGTGCTGGAAATTGTTGGGCGTGCTTTAAT
TGGTCCAGGAGTGGTCGCTGGTGTTCTGATGGATTTTTGTTATTTGTTCAGATGGTCCAAGATCGCGGCGTGCCTGCCCG
GGAGGACGGACAACGAGATCAAGAACGTCTGGAACACGCACCTGAAGAAGAAGGCGTCGGAGCAGAAGCCAGGCGTTGGC
GAGAGCAAGGGCGAGGCGGCCGACGGAGACCCTGACACGCCCGCCCCTTCGTTGTCTTCGGCGTCCTCATCGATGACGAC
CAGCGACGGGTCCAACGGCGGCGCCGGGGAGCAGTGCGGCACGAGCAACGAGCCCGAAACGATAAACGTACCATCGCCTC
TCGAGCTGGAGCTGGAGCCAGTCATGGACATCCTGGACATGCTGGCCGACGAGCCCACGGAGGCGTTCGCGACGGCGGCG
CCAATGCCAACGTCTTCGTGCTCGTCGTCCTCCCTCACGACGTGCGCCGGGGGCGGCGGCGGTGTGGAGGAGCTGCTCGA
GCTGCCGGACATCGACATGGACGCTGACATCTGGAGCATCATCGATGACGATGTCGCGCGCCTACAACAAGGCGATGCAA
CAGTGCCATGTACGACCAAGG---------------AGGGAAGCGAGTGGTGGTTGGAGGATTTGGAGAAGGAACTCGGC
CTGTGGGGCCCCGCGGAGGAATCCCAGCCCCAGGCGGGCCCACTCGACCAGATAGGCTACCCGGGCCAACTCTACGAAAC
GGAGGGGGACATGGTGATGGTATCCTCCTGCCCGCCGTCCAGATCGGATCATGAGGCGTCCAATTCTGAATAGAAGGTTG
AGATCCACGGTGGTCCCATCGGATGCACGAGATCAAACATTACAACTTGGAGAAGTTTTTAACGAAACGTTTGAGTTGCT
TATTTGGTTTCAT---TGTTTGAGTAAAATTCAAAGTAAAAGGGGCGGGTCGGTTAGAATGCACATACAAATTGGAGGAA
TGAAAAGTTAGGTCAATACAAGGCCAAGTAGCACGAGTATCTCTACTATC------------------------------
--------TAACAGTTTTTAACCAAATGTACCATGGCATGTACTATGCAACAGCACTCCACGGATCAACAGCCAGTGAGA
AGTGCTATGCAGACATGCGTACGGATGCAGTATGTCATTTGGTTAATTTTGTACTAGTTCTTAATA--AAAAAATCGCGA
CTAATTTGTACTGTACCATGCACATATACTGCACAGCGTCATGGTGACGCAAGAGCTGGATCATCCGATGGCCCACCACT
ACTACCACCATCATGTATGCCTTTTGAAGAA-TCATCACCGGGCTTTGATTATGCATTCTAAAGCAACTTGCTTTTGCTA
ATGCGATGTAACCTTTTTCTTCTCCTTTAGCTTGCTTTTATTTTATTTTATTTTATTTCTTTAGATTTGATTGCATGTTG
CTTCGGATGAGCAAAATCACATGAAACTTGATGATAGAGAAGTTGGTCACCTAAGCAGTGAAATGGGAGCATGGGAA---
-----TGGAGCCATATTTTGGTGGTGTTGAGTTCTTAATTTTAAGGGCTTACATTCCTTTTCGAAAACACCGTACAACAT
ATTAGTCATTGTTAATGTTGATTTTTATTTTA-TTTTTGAGATCCACTTCTTTTCGAGAAAACTGACAA-ATCAACTCAG
TCGGTGCCTCAATCTTTCGATGAT-AAACACTTTGTCAATTTGGGTGGAATCAACTTTGGTGATGCGACGATGTTGCGCC
TTTGCAATCGCTAA------------------------------------------------------------------
---------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-------
---------SS------------------------SS--------------------------S----------------
----------S-------------------------------------------------------------SSSS----
--S--S------S---------------------S--SSSS---------------------------------------
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-S---S-----S-S-------------S-------------------------S--------------------------
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-------------------------------------S------------------------------------------
---------------------S----------------------------------------------------------
------------S---SSSSSS----S--------------------------S--------------------------
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---------------------------------------------------S----------------------------
-------------------------------------------------------------------------------S
---------S-----------------------------------------------S-----------------S----
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----------------------------------------------------S---------------------------
---------------------------SS--S------------------------S-----S-----------------
-------------------------------------------------------------------------S------
----------------------------S----S----------------------------------------------
-----------------------S--S----------------------------------------------------S
--------------------------------------------------------S-----------------------
--------------S------------------------S-----------SSS-SS-SSS-------------------
-------------------------------SS----------------------------S------------------
----S------------------------------------S-------S----------------S-------------
-----------SS-S-SSSS-------S----------------------------------------------------
--------------SSS---------------------------------------------------------------
--------------------------------S-----------------------------------------------
-----------------------------------------------------------------------------SSS
SSSSS----S---------------------------------------------S-----------------S------
S---S--------------S----S------S-----------------------S-------------S---------S
---S-------------------SS-------------------------------------------------------
--S------------------S---S-----------SS-----------------------------------------
---SS-----S--------------------SSSSSSSS
>forward_381
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-----------------------------------------ACACGTGTGGGCGTTAGATT-------------------
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>reverse_1298
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-----------------GCCGTTAATCTGCGTGCATT-------------------------------------------
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>forward_1014
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----------------------------------AGAGTGGTCTGGTCAGGTGT--------------------------
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>reverse_1952
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-------------------------------AGAGGAGGGAAACGAGTGGT-----------------------------
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>forward_1293
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-------------------------------------------------------------------------CCTTGCT
CGGCAACAAGTAG-------------------------------------------------------------------
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>reverse_3158
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-------------------------------------GGTGGTTGGCTAGGACTCAC-----------------------
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