Multiple sequence alignment - TraesCS6D01G222600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G222600 | chr6D | 100.000 | 2798 | 0 | 0 | 1 | 2798 | 314055149 | 314057946 | 0.000000e+00 | 5168.0 |
1 | TraesCS6D01G222600 | chr6B | 89.331 | 2437 | 118 | 54 | 210 | 2564 | 512449103 | 512446727 | 0.000000e+00 | 2929.0 |
2 | TraesCS6D01G222600 | chr6B | 100.000 | 28 | 0 | 0 | 31 | 58 | 512449211 | 512449184 | 5.000000e-03 | 52.8 |
3 | TraesCS6D01G222600 | chr6A | 88.478 | 1918 | 94 | 45 | 269 | 2143 | 451659252 | 451661085 | 0.000000e+00 | 2200.0 |
4 | TraesCS6D01G222600 | chr6A | 93.931 | 379 | 20 | 3 | 2187 | 2564 | 451661091 | 451661467 | 1.120000e-158 | 569.0 |
5 | TraesCS6D01G222600 | chr2D | 90.288 | 278 | 27 | 0 | 1111 | 1388 | 492676514 | 492676791 | 5.700000e-97 | 364.0 |
6 | TraesCS6D01G222600 | chr2D | 96.154 | 104 | 4 | 0 | 2677 | 2780 | 552737916 | 552737813 | 1.330000e-38 | 171.0 |
7 | TraesCS6D01G222600 | chr2D | 97.000 | 100 | 3 | 0 | 2681 | 2780 | 586128781 | 586128682 | 4.790000e-38 | 169.0 |
8 | TraesCS6D01G222600 | chr2B | 89.531 | 277 | 29 | 0 | 1111 | 1387 | 578605289 | 578605565 | 4.430000e-93 | 351.0 |
9 | TraesCS6D01G222600 | chr2B | 91.837 | 49 | 4 | 0 | 61 | 109 | 70839681 | 70839633 | 5.000000e-08 | 69.4 |
10 | TraesCS6D01G222600 | chr2A | 89.531 | 277 | 29 | 0 | 1111 | 1387 | 637984701 | 637984977 | 4.430000e-93 | 351.0 |
11 | TraesCS6D01G222600 | chr2A | 88.136 | 59 | 5 | 2 | 54 | 110 | 539588893 | 539588951 | 5.000000e-08 | 69.4 |
12 | TraesCS6D01G222600 | chr7D | 97.000 | 100 | 3 | 0 | 2681 | 2780 | 593954476 | 593954377 | 4.790000e-38 | 169.0 |
13 | TraesCS6D01G222600 | chr7D | 90.385 | 52 | 5 | 0 | 58 | 109 | 343752020 | 343751969 | 5.000000e-08 | 69.4 |
14 | TraesCS6D01G222600 | chr7B | 97.000 | 100 | 3 | 0 | 2681 | 2780 | 530020883 | 530020982 | 4.790000e-38 | 169.0 |
15 | TraesCS6D01G222600 | chr5D | 97.000 | 100 | 3 | 0 | 2681 | 2780 | 195599790 | 195599889 | 4.790000e-38 | 169.0 |
16 | TraesCS6D01G222600 | chr5D | 97.000 | 100 | 3 | 0 | 2681 | 2780 | 467447811 | 467447712 | 4.790000e-38 | 169.0 |
17 | TraesCS6D01G222600 | chr5D | 88.525 | 61 | 4 | 3 | 50 | 109 | 371845051 | 371845109 | 1.390000e-08 | 71.3 |
18 | TraesCS6D01G222600 | chr1D | 97.000 | 100 | 3 | 0 | 2681 | 2780 | 107110483 | 107110582 | 4.790000e-38 | 169.0 |
19 | TraesCS6D01G222600 | chr1D | 96.970 | 99 | 3 | 0 | 2682 | 2780 | 401202198 | 401202296 | 1.720000e-37 | 167.0 |
20 | TraesCS6D01G222600 | chr1D | 96.970 | 99 | 3 | 0 | 2682 | 2780 | 412871807 | 412871709 | 1.720000e-37 | 167.0 |
21 | TraesCS6D01G222600 | chr4D | 79.204 | 226 | 38 | 9 | 1108 | 1330 | 457075098 | 457075317 | 6.240000e-32 | 148.0 |
22 | TraesCS6D01G222600 | chr4D | 85.075 | 67 | 4 | 6 | 47 | 110 | 332387844 | 332387907 | 2.330000e-06 | 63.9 |
23 | TraesCS6D01G222600 | chr7A | 93.878 | 49 | 3 | 0 | 61 | 109 | 16623823 | 16623775 | 1.070000e-09 | 75.0 |
24 | TraesCS6D01G222600 | chr4A | 95.652 | 46 | 2 | 0 | 64 | 109 | 1074717 | 1074762 | 1.070000e-09 | 75.0 |
25 | TraesCS6D01G222600 | chr4A | 88.136 | 59 | 3 | 4 | 58 | 114 | 659629620 | 659629676 | 1.800000e-07 | 67.6 |
26 | TraesCS6D01G222600 | chr3D | 95.652 | 46 | 2 | 0 | 64 | 109 | 19116405 | 19116450 | 1.070000e-09 | 75.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G222600 | chr6D | 314055149 | 314057946 | 2797 | False | 5168.0 | 5168 | 100.0000 | 1 | 2798 | 1 | chr6D.!!$F1 | 2797 |
1 | TraesCS6D01G222600 | chr6B | 512446727 | 512449211 | 2484 | True | 1490.9 | 2929 | 94.6655 | 31 | 2564 | 2 | chr6B.!!$R1 | 2533 |
2 | TraesCS6D01G222600 | chr6A | 451659252 | 451661467 | 2215 | False | 1384.5 | 2200 | 91.2045 | 269 | 2564 | 2 | chr6A.!!$F1 | 2295 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
19 | 20 | 0.037697 | TTACGTGAGCAGCGGTCATT | 60.038 | 50.0 | 12.24 | 6.81 | 42.05 | 2.57 | F |
1446 | 1505 | 0.030369 | GCCGGTCGTCGATCATTAGT | 59.970 | 55.0 | 6.28 | 0.00 | 42.43 | 2.24 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1596 | 1655 | 0.041312 | CGCAGCTGCTAACGTTGTTT | 60.041 | 50.0 | 34.22 | 0.0 | 39.32 | 2.83 | R |
2765 | 2890 | 0.035458 | CTCACTCCCACACTTCCCAC | 59.965 | 60.0 | 0.00 | 0.0 | 0.00 | 4.61 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 3.044280 | TTACGTGAGCAGCGGTCA | 58.956 | 55.556 | 0.00 | 6.39 | 37.74 | 4.02 |
18 | 19 | 1.589630 | TTACGTGAGCAGCGGTCAT | 59.410 | 52.632 | 12.24 | 2.58 | 42.05 | 3.06 |
19 | 20 | 0.037697 | TTACGTGAGCAGCGGTCATT | 60.038 | 50.000 | 12.24 | 6.81 | 42.05 | 2.57 |
20 | 21 | 0.735978 | TACGTGAGCAGCGGTCATTG | 60.736 | 55.000 | 12.24 | 10.71 | 42.05 | 2.82 |
21 | 22 | 2.482374 | GTGAGCAGCGGTCATTGC | 59.518 | 61.111 | 12.24 | 0.00 | 42.05 | 3.56 |
22 | 23 | 3.120385 | TGAGCAGCGGTCATTGCG | 61.120 | 61.111 | 6.39 | 0.00 | 44.80 | 4.85 |
23 | 24 | 3.121030 | GAGCAGCGGTCATTGCGT | 61.121 | 61.111 | 3.45 | 0.00 | 44.80 | 5.24 |
24 | 25 | 3.088500 | GAGCAGCGGTCATTGCGTC | 62.089 | 63.158 | 3.45 | 0.00 | 44.80 | 5.19 |
25 | 26 | 4.166011 | GCAGCGGTCATTGCGTCC | 62.166 | 66.667 | 0.00 | 0.00 | 37.44 | 4.79 |
58 | 59 | 1.089920 | CGCCAGCTTGCTCTTTGTAT | 58.910 | 50.000 | 8.31 | 0.00 | 0.00 | 2.29 |
59 | 60 | 2.093711 | TCGCCAGCTTGCTCTTTGTATA | 60.094 | 45.455 | 8.31 | 0.00 | 0.00 | 1.47 |
60 | 61 | 2.286294 | CGCCAGCTTGCTCTTTGTATAG | 59.714 | 50.000 | 8.31 | 0.00 | 0.00 | 1.31 |
61 | 62 | 3.274288 | GCCAGCTTGCTCTTTGTATAGT | 58.726 | 45.455 | 1.78 | 0.00 | 0.00 | 2.12 |
62 | 63 | 4.442706 | GCCAGCTTGCTCTTTGTATAGTA | 58.557 | 43.478 | 1.78 | 0.00 | 0.00 | 1.82 |
63 | 64 | 4.876107 | GCCAGCTTGCTCTTTGTATAGTAA | 59.124 | 41.667 | 1.78 | 0.00 | 0.00 | 2.24 |
64 | 65 | 5.007136 | GCCAGCTTGCTCTTTGTATAGTAAG | 59.993 | 44.000 | 1.78 | 0.00 | 38.16 | 2.34 |
65 | 66 | 6.109359 | CCAGCTTGCTCTTTGTATAGTAAGT | 58.891 | 40.000 | 0.00 | 0.00 | 37.64 | 2.24 |
66 | 67 | 7.265673 | CCAGCTTGCTCTTTGTATAGTAAGTA | 58.734 | 38.462 | 0.00 | 0.00 | 37.64 | 2.24 |
67 | 68 | 7.222999 | CCAGCTTGCTCTTTGTATAGTAAGTAC | 59.777 | 40.741 | 0.00 | 0.00 | 37.64 | 2.73 |
68 | 69 | 7.976734 | CAGCTTGCTCTTTGTATAGTAAGTACT | 59.023 | 37.037 | 0.00 | 0.00 | 37.64 | 2.73 |
69 | 70 | 8.192110 | AGCTTGCTCTTTGTATAGTAAGTACTC | 58.808 | 37.037 | 0.00 | 0.00 | 37.64 | 2.59 |
70 | 71 | 7.435784 | GCTTGCTCTTTGTATAGTAAGTACTCC | 59.564 | 40.741 | 0.00 | 0.00 | 37.64 | 3.85 |
71 | 72 | 7.344095 | TGCTCTTTGTATAGTAAGTACTCCC | 57.656 | 40.000 | 0.00 | 0.00 | 37.73 | 4.30 |
72 | 73 | 7.124052 | TGCTCTTTGTATAGTAAGTACTCCCT | 58.876 | 38.462 | 0.00 | 0.00 | 37.73 | 4.20 |
73 | 74 | 7.284944 | TGCTCTTTGTATAGTAAGTACTCCCTC | 59.715 | 40.741 | 0.00 | 0.00 | 37.73 | 4.30 |
74 | 75 | 7.255555 | GCTCTTTGTATAGTAAGTACTCCCTCC | 60.256 | 44.444 | 0.00 | 0.00 | 37.73 | 4.30 |
75 | 76 | 6.769822 | TCTTTGTATAGTAAGTACTCCCTCCG | 59.230 | 42.308 | 0.00 | 0.00 | 37.73 | 4.63 |
76 | 77 | 5.636903 | TGTATAGTAAGTACTCCCTCCGT | 57.363 | 43.478 | 0.00 | 0.00 | 37.73 | 4.69 |
77 | 78 | 6.747414 | TGTATAGTAAGTACTCCCTCCGTA | 57.253 | 41.667 | 0.00 | 0.00 | 37.73 | 4.02 |
78 | 79 | 7.136822 | TGTATAGTAAGTACTCCCTCCGTAA | 57.863 | 40.000 | 0.00 | 0.00 | 37.73 | 3.18 |
79 | 80 | 7.573710 | TGTATAGTAAGTACTCCCTCCGTAAA | 58.426 | 38.462 | 0.00 | 0.00 | 37.73 | 2.01 |
80 | 81 | 6.951062 | ATAGTAAGTACTCCCTCCGTAAAC | 57.049 | 41.667 | 0.00 | 0.00 | 37.73 | 2.01 |
81 | 82 | 4.928263 | AGTAAGTACTCCCTCCGTAAACT | 58.072 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
82 | 83 | 6.067217 | AGTAAGTACTCCCTCCGTAAACTA | 57.933 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
83 | 84 | 6.485171 | AGTAAGTACTCCCTCCGTAAACTAA | 58.515 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
84 | 85 | 7.122048 | AGTAAGTACTCCCTCCGTAAACTAAT | 58.878 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
85 | 86 | 8.275040 | AGTAAGTACTCCCTCCGTAAACTAATA | 58.725 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
86 | 87 | 9.072375 | GTAAGTACTCCCTCCGTAAACTAATAT | 57.928 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
88 | 89 | 9.646522 | AAGTACTCCCTCCGTAAACTAATATAA | 57.353 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
89 | 90 | 9.646522 | AGTACTCCCTCCGTAAACTAATATAAA | 57.353 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
154 | 155 | 8.894768 | ATAAGCAGATTAATAGTCCAACTGTC | 57.105 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
155 | 156 | 5.352284 | AGCAGATTAATAGTCCAACTGTCG | 58.648 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
166 | 167 | 0.962489 | CAACTGTCGGACTGGAGACT | 59.038 | 55.000 | 17.64 | 0.00 | 38.16 | 3.24 |
167 | 168 | 1.068194 | CAACTGTCGGACTGGAGACTC | 60.068 | 57.143 | 17.64 | 0.00 | 38.16 | 3.36 |
168 | 169 | 0.402504 | ACTGTCGGACTGGAGACTCT | 59.597 | 55.000 | 17.64 | 0.00 | 38.16 | 3.24 |
169 | 170 | 1.629353 | ACTGTCGGACTGGAGACTCTA | 59.371 | 52.381 | 17.64 | 0.00 | 38.16 | 2.43 |
170 | 171 | 2.285083 | CTGTCGGACTGGAGACTCTAG | 58.715 | 57.143 | 13.88 | 13.88 | 38.16 | 2.43 |
171 | 172 | 1.629353 | TGTCGGACTGGAGACTCTAGT | 59.371 | 52.381 | 20.33 | 20.33 | 41.08 | 2.57 |
172 | 173 | 2.011222 | GTCGGACTGGAGACTCTAGTG | 58.989 | 57.143 | 24.54 | 12.20 | 38.37 | 2.74 |
173 | 174 | 1.629353 | TCGGACTGGAGACTCTAGTGT | 59.371 | 52.381 | 24.54 | 3.32 | 38.37 | 3.55 |
174 | 175 | 2.011222 | CGGACTGGAGACTCTAGTGTC | 58.989 | 57.143 | 24.54 | 15.59 | 38.37 | 3.67 |
175 | 176 | 2.615747 | CGGACTGGAGACTCTAGTGTCA | 60.616 | 54.545 | 24.54 | 1.65 | 38.37 | 3.58 |
176 | 177 | 3.422796 | GGACTGGAGACTCTAGTGTCAA | 58.577 | 50.000 | 24.54 | 10.13 | 38.37 | 3.18 |
177 | 178 | 3.442273 | GGACTGGAGACTCTAGTGTCAAG | 59.558 | 52.174 | 24.54 | 18.68 | 43.03 | 3.02 |
180 | 181 | 3.230976 | TGGAGACTCTAGTGTCAAGCAA | 58.769 | 45.455 | 23.12 | 6.59 | 39.78 | 3.91 |
181 | 182 | 3.641436 | TGGAGACTCTAGTGTCAAGCAAA | 59.359 | 43.478 | 23.12 | 3.96 | 39.78 | 3.68 |
182 | 183 | 4.100963 | TGGAGACTCTAGTGTCAAGCAAAA | 59.899 | 41.667 | 23.12 | 3.08 | 39.78 | 2.44 |
183 | 184 | 5.221722 | TGGAGACTCTAGTGTCAAGCAAAAT | 60.222 | 40.000 | 23.12 | 3.73 | 39.78 | 1.82 |
184 | 185 | 5.350091 | GGAGACTCTAGTGTCAAGCAAAATC | 59.650 | 44.000 | 23.12 | 11.29 | 39.78 | 2.17 |
186 | 187 | 7.233389 | AGACTCTAGTGTCAAGCAAAATCTA | 57.767 | 36.000 | 23.12 | 0.00 | 39.27 | 1.98 |
187 | 188 | 7.846066 | AGACTCTAGTGTCAAGCAAAATCTAT | 58.154 | 34.615 | 23.12 | 0.00 | 39.27 | 1.98 |
188 | 189 | 7.978975 | AGACTCTAGTGTCAAGCAAAATCTATC | 59.021 | 37.037 | 23.12 | 0.00 | 39.27 | 2.08 |
189 | 190 | 6.754209 | ACTCTAGTGTCAAGCAAAATCTATCG | 59.246 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
190 | 191 | 6.863275 | TCTAGTGTCAAGCAAAATCTATCGA | 58.137 | 36.000 | 0.00 | 0.00 | 0.00 | 3.59 |
191 | 192 | 5.786401 | AGTGTCAAGCAAAATCTATCGAC | 57.214 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
192 | 193 | 5.237815 | AGTGTCAAGCAAAATCTATCGACA | 58.762 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
193 | 194 | 5.349817 | AGTGTCAAGCAAAATCTATCGACAG | 59.650 | 40.000 | 0.00 | 0.00 | 33.17 | 3.51 |
194 | 195 | 5.348724 | GTGTCAAGCAAAATCTATCGACAGA | 59.651 | 40.000 | 0.00 | 0.00 | 33.17 | 3.41 |
195 | 196 | 6.036517 | GTGTCAAGCAAAATCTATCGACAGAT | 59.963 | 38.462 | 0.00 | 0.00 | 40.76 | 2.90 |
196 | 197 | 7.222805 | GTGTCAAGCAAAATCTATCGACAGATA | 59.777 | 37.037 | 6.63 | 0.00 | 38.26 | 1.98 |
198 | 199 | 8.604035 | GTCAAGCAAAATCTATCGACAGATAAA | 58.396 | 33.333 | 6.63 | 0.00 | 38.73 | 1.40 |
199 | 200 | 9.161629 | TCAAGCAAAATCTATCGACAGATAAAA | 57.838 | 29.630 | 6.63 | 0.00 | 38.73 | 1.52 |
200 | 201 | 9.214953 | CAAGCAAAATCTATCGACAGATAAAAC | 57.785 | 33.333 | 6.63 | 0.00 | 38.73 | 2.43 |
201 | 202 | 8.492673 | AGCAAAATCTATCGACAGATAAAACA | 57.507 | 30.769 | 6.63 | 0.00 | 38.73 | 2.83 |
202 | 203 | 8.607459 | AGCAAAATCTATCGACAGATAAAACAG | 58.393 | 33.333 | 6.63 | 0.00 | 38.73 | 3.16 |
203 | 204 | 7.852945 | GCAAAATCTATCGACAGATAAAACAGG | 59.147 | 37.037 | 6.63 | 0.00 | 38.73 | 4.00 |
204 | 205 | 8.883731 | CAAAATCTATCGACAGATAAAACAGGT | 58.116 | 33.333 | 6.63 | 0.00 | 38.73 | 4.00 |
205 | 206 | 8.425577 | AAATCTATCGACAGATAAAACAGGTG | 57.574 | 34.615 | 6.63 | 0.00 | 38.73 | 4.00 |
208 | 209 | 3.571571 | TCGACAGATAAAACAGGTGACG | 58.428 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
244 | 245 | 0.725784 | GTGTAGCACAACGCACATGC | 60.726 | 55.000 | 0.00 | 0.00 | 46.13 | 4.06 |
248 | 249 | 2.147749 | GCACAACGCACATGCATCG | 61.148 | 57.895 | 0.00 | 0.00 | 42.21 | 3.84 |
254 | 255 | 2.819595 | GCACATGCATCGGTCGGT | 60.820 | 61.111 | 0.00 | 0.00 | 41.59 | 4.69 |
282 | 283 | 1.067060 | CTATCCATCTTGGTCGACGCA | 59.933 | 52.381 | 9.92 | 6.05 | 39.03 | 5.24 |
304 | 306 | 1.972198 | CAGCTGGAGGGACACGTAA | 59.028 | 57.895 | 5.57 | 0.00 | 0.00 | 3.18 |
305 | 307 | 0.389948 | CAGCTGGAGGGACACGTAAC | 60.390 | 60.000 | 5.57 | 0.00 | 0.00 | 2.50 |
306 | 308 | 1.445582 | GCTGGAGGGACACGTAACG | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
307 | 309 | 1.445582 | CTGGAGGGACACGTAACGC | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 4.84 |
308 | 310 | 2.149803 | CTGGAGGGACACGTAACGCA | 62.150 | 60.000 | 9.90 | 0.00 | 0.00 | 5.24 |
309 | 311 | 1.005867 | GGAGGGACACGTAACGCAA | 60.006 | 57.895 | 9.90 | 0.00 | 0.00 | 4.85 |
319 | 321 | 0.245585 | CGTAACGCAACGTAACGTCG | 60.246 | 55.000 | 15.05 | 11.72 | 42.68 | 5.12 |
345 | 347 | 5.529430 | TCGAACTGGAGATAAGCTCTTCTAG | 59.471 | 44.000 | 0.00 | 0.00 | 43.43 | 2.43 |
377 | 383 | 2.545731 | GATCCAAGGACGAAGAGAAGC | 58.454 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
532 | 555 | 4.735132 | TTCGGGAGAAGCCGTGCG | 62.735 | 66.667 | 0.00 | 0.00 | 45.39 | 5.34 |
555 | 578 | 1.825191 | CTGGGCCGATTGACATGGG | 60.825 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
732 | 768 | 1.227089 | CGAGGCCCAAGTCGATCTG | 60.227 | 63.158 | 6.26 | 0.00 | 38.50 | 2.90 |
813 | 849 | 3.896133 | GGCCCGATACAGCGACGA | 61.896 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
911 | 951 | 1.065109 | GGTGCACCACGTTCCAAAC | 59.935 | 57.895 | 31.23 | 0.00 | 34.83 | 2.93 |
950 | 999 | 2.622436 | CTACTAGCCAGCTTGGTTCAC | 58.378 | 52.381 | 0.00 | 0.00 | 40.46 | 3.18 |
978 | 1027 | 4.280101 | TCTGTCTCTGACGATTCGATTC | 57.720 | 45.455 | 13.95 | 1.18 | 34.95 | 2.52 |
980 | 1029 | 2.752903 | TGTCTCTGACGATTCGATTCCA | 59.247 | 45.455 | 13.95 | 4.37 | 34.95 | 3.53 |
981 | 1030 | 3.192633 | TGTCTCTGACGATTCGATTCCAA | 59.807 | 43.478 | 13.95 | 0.00 | 34.95 | 3.53 |
1086 | 1135 | 0.964358 | GCCAGTTCCTTCAGCAGCAT | 60.964 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
1305 | 1360 | 2.125350 | CTGGAGCAGGACTTCGCC | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
1387 | 1442 | 4.492160 | CTCTCGCCGCGCAGGTAA | 62.492 | 66.667 | 8.75 | 1.70 | 43.70 | 2.85 |
1388 | 1443 | 3.774959 | CTCTCGCCGCGCAGGTAAT | 62.775 | 63.158 | 8.75 | 0.00 | 43.70 | 1.89 |
1389 | 1444 | 2.890474 | CTCGCCGCGCAGGTAATT | 60.890 | 61.111 | 8.75 | 0.00 | 43.70 | 1.40 |
1419 | 1478 | 2.209690 | TGCATGCCATATCCTCCATG | 57.790 | 50.000 | 16.68 | 0.00 | 38.41 | 3.66 |
1445 | 1504 | 0.663568 | GGCCGGTCGTCGATCATTAG | 60.664 | 60.000 | 6.28 | 0.00 | 42.43 | 1.73 |
1446 | 1505 | 0.030369 | GCCGGTCGTCGATCATTAGT | 59.970 | 55.000 | 6.28 | 0.00 | 42.43 | 2.24 |
1447 | 1506 | 1.535437 | GCCGGTCGTCGATCATTAGTT | 60.535 | 52.381 | 6.28 | 0.00 | 42.43 | 2.24 |
1448 | 1507 | 2.382519 | CCGGTCGTCGATCATTAGTTC | 58.617 | 52.381 | 6.28 | 0.00 | 42.43 | 3.01 |
1449 | 1508 | 2.223409 | CCGGTCGTCGATCATTAGTTCA | 60.223 | 50.000 | 6.28 | 0.00 | 42.43 | 3.18 |
1450 | 1509 | 3.550233 | CCGGTCGTCGATCATTAGTTCAT | 60.550 | 47.826 | 6.28 | 0.00 | 42.43 | 2.57 |
1451 | 1510 | 4.042398 | CGGTCGTCGATCATTAGTTCATT | 58.958 | 43.478 | 6.28 | 0.00 | 42.43 | 2.57 |
1452 | 1511 | 5.209977 | CGGTCGTCGATCATTAGTTCATTA | 58.790 | 41.667 | 6.28 | 0.00 | 42.43 | 1.90 |
1461 | 1520 | 8.565416 | TCGATCATTAGTTCATTACAGATACGT | 58.435 | 33.333 | 0.00 | 0.00 | 0.00 | 3.57 |
1596 | 1655 | 1.572941 | CGACGTGGACGACAAGAGA | 59.427 | 57.895 | 6.12 | 0.00 | 43.02 | 3.10 |
1640 | 1699 | 1.608717 | AAGGCGAAGGATGAGAGCGT | 61.609 | 55.000 | 0.00 | 0.00 | 0.00 | 5.07 |
1710 | 1769 | 2.126189 | GACGACCACCTGGCGTAC | 60.126 | 66.667 | 11.96 | 5.13 | 43.88 | 3.67 |
1812 | 1871 | 2.250188 | GCATGAACCAACGTTGCATAC | 58.750 | 47.619 | 22.93 | 11.54 | 30.30 | 2.39 |
1843 | 1925 | 1.200484 | TGTACGTCGATGCTGTTGCTA | 59.800 | 47.619 | 4.06 | 0.00 | 40.48 | 3.49 |
1923 | 2014 | 7.661027 | GGTAGAATCGTAGAACAGATAGGTAGT | 59.339 | 40.741 | 0.00 | 0.00 | 43.58 | 2.73 |
1924 | 2015 | 9.703892 | GTAGAATCGTAGAACAGATAGGTAGTA | 57.296 | 37.037 | 0.00 | 0.00 | 43.58 | 1.82 |
1925 | 2016 | 8.836268 | AGAATCGTAGAACAGATAGGTAGTAG | 57.164 | 38.462 | 0.00 | 0.00 | 43.58 | 2.57 |
1956 | 2047 | 1.203758 | TGCAAGCAGCCATGAAATCTG | 59.796 | 47.619 | 0.00 | 0.00 | 44.83 | 2.90 |
1969 | 2061 | 5.450171 | CATGAAATCTGATGCGAGAAATCC | 58.550 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
1978 | 2070 | 2.782222 | CGAGAAATCCTCCCGCCGA | 61.782 | 63.158 | 0.00 | 0.00 | 38.71 | 5.54 |
2037 | 2142 | 3.751175 | TGTCCGTGAAAATGGCTTAAGAG | 59.249 | 43.478 | 6.67 | 0.00 | 0.00 | 2.85 |
2045 | 2150 | 0.530744 | ATGGCTTAAGAGTCACGCGA | 59.469 | 50.000 | 15.93 | 0.00 | 40.98 | 5.87 |
2047 | 2152 | 0.714439 | GGCTTAAGAGTCACGCGAAC | 59.286 | 55.000 | 15.93 | 11.04 | 0.00 | 3.95 |
2086 | 2195 | 0.324614 | TCATGTGATTCCTGTGGCGT | 59.675 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2110 | 2221 | 0.319641 | GCCGACGAAAGAGAACCACT | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2139 | 2253 | 1.583054 | AGAGAACGTGTTTCACCAGC | 58.417 | 50.000 | 0.00 | 0.00 | 36.57 | 4.85 |
2169 | 2283 | 5.773575 | TGTCGCTCTAGAAATCCATACATC | 58.226 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
2202 | 2316 | 3.169924 | CTCTCGCGCGCGTGTTTA | 61.170 | 61.111 | 46.54 | 29.86 | 40.74 | 2.01 |
2548 | 2673 | 1.821759 | CCGCCCGCCACATCAAATA | 60.822 | 57.895 | 0.00 | 0.00 | 0.00 | 1.40 |
2564 | 2689 | 0.305922 | AATAAGAAGCGCGCAGATGC | 59.694 | 50.000 | 35.10 | 11.93 | 37.78 | 3.91 |
2565 | 2690 | 0.531532 | ATAAGAAGCGCGCAGATGCT | 60.532 | 50.000 | 35.10 | 14.48 | 42.36 | 3.79 |
2566 | 2691 | 0.102300 | TAAGAAGCGCGCAGATGCTA | 59.898 | 50.000 | 35.10 | 13.38 | 39.76 | 3.49 |
2567 | 2692 | 0.740868 | AAGAAGCGCGCAGATGCTAA | 60.741 | 50.000 | 35.10 | 0.00 | 39.76 | 3.09 |
2568 | 2693 | 1.150567 | AGAAGCGCGCAGATGCTAAG | 61.151 | 55.000 | 35.10 | 0.00 | 39.76 | 2.18 |
2569 | 2694 | 2.098842 | GAAGCGCGCAGATGCTAAGG | 62.099 | 60.000 | 35.10 | 0.00 | 39.76 | 2.69 |
2570 | 2695 | 4.305036 | GCGCGCAGATGCTAAGGC | 62.305 | 66.667 | 29.10 | 0.00 | 39.32 | 4.35 |
2571 | 2696 | 3.643978 | CGCGCAGATGCTAAGGCC | 61.644 | 66.667 | 8.75 | 0.00 | 39.32 | 5.19 |
2572 | 2697 | 2.514592 | GCGCAGATGCTAAGGCCA | 60.515 | 61.111 | 5.01 | 0.00 | 39.32 | 5.36 |
2573 | 2698 | 2.114670 | GCGCAGATGCTAAGGCCAA | 61.115 | 57.895 | 5.01 | 0.00 | 39.32 | 4.52 |
2574 | 2699 | 1.723870 | CGCAGATGCTAAGGCCAAC | 59.276 | 57.895 | 5.01 | 0.00 | 39.32 | 3.77 |
2575 | 2700 | 0.745845 | CGCAGATGCTAAGGCCAACT | 60.746 | 55.000 | 5.01 | 0.00 | 39.32 | 3.16 |
2576 | 2701 | 1.020437 | GCAGATGCTAAGGCCAACTC | 58.980 | 55.000 | 5.01 | 0.00 | 38.21 | 3.01 |
2577 | 2702 | 1.673168 | CAGATGCTAAGGCCAACTCC | 58.327 | 55.000 | 5.01 | 0.00 | 37.74 | 3.85 |
2578 | 2703 | 1.065199 | CAGATGCTAAGGCCAACTCCA | 60.065 | 52.381 | 5.01 | 0.00 | 37.74 | 3.86 |
2579 | 2704 | 1.635487 | AGATGCTAAGGCCAACTCCAA | 59.365 | 47.619 | 5.01 | 0.00 | 37.74 | 3.53 |
2580 | 2705 | 1.745653 | GATGCTAAGGCCAACTCCAAC | 59.254 | 52.381 | 5.01 | 0.00 | 37.74 | 3.77 |
2581 | 2706 | 0.771127 | TGCTAAGGCCAACTCCAACT | 59.229 | 50.000 | 5.01 | 0.00 | 37.74 | 3.16 |
2582 | 2707 | 1.271379 | TGCTAAGGCCAACTCCAACTC | 60.271 | 52.381 | 5.01 | 0.00 | 37.74 | 3.01 |
2583 | 2708 | 1.726853 | CTAAGGCCAACTCCAACTCG | 58.273 | 55.000 | 5.01 | 0.00 | 0.00 | 4.18 |
2584 | 2709 | 1.275291 | CTAAGGCCAACTCCAACTCGA | 59.725 | 52.381 | 5.01 | 0.00 | 0.00 | 4.04 |
2585 | 2710 | 0.250338 | AAGGCCAACTCCAACTCGAC | 60.250 | 55.000 | 5.01 | 0.00 | 0.00 | 4.20 |
2586 | 2711 | 1.671379 | GGCCAACTCCAACTCGACC | 60.671 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
2587 | 2712 | 2.027625 | GCCAACTCCAACTCGACCG | 61.028 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
2588 | 2713 | 2.027625 | CCAACTCCAACTCGACCGC | 61.028 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
2589 | 2714 | 2.049433 | AACTCCAACTCGACCGCG | 60.049 | 61.111 | 0.00 | 0.00 | 39.35 | 6.46 |
2590 | 2715 | 4.719369 | ACTCCAACTCGACCGCGC | 62.719 | 66.667 | 0.00 | 0.00 | 37.46 | 6.86 |
2600 | 2725 | 4.405173 | GACCGCGCGACGTCAAAC | 62.405 | 66.667 | 34.63 | 5.59 | 41.42 | 2.93 |
2610 | 2735 | 4.717917 | CGTCAAACGGATGTTCGC | 57.282 | 55.556 | 0.00 | 0.00 | 37.31 | 4.70 |
2611 | 2736 | 2.150424 | CGTCAAACGGATGTTCGCT | 58.850 | 52.632 | 0.00 | 0.00 | 37.31 | 4.93 |
2612 | 2737 | 0.511221 | CGTCAAACGGATGTTCGCTT | 59.489 | 50.000 | 0.00 | 0.00 | 37.31 | 4.68 |
2613 | 2738 | 1.070175 | CGTCAAACGGATGTTCGCTTT | 60.070 | 47.619 | 0.00 | 0.00 | 37.31 | 3.51 |
2614 | 2739 | 2.156117 | CGTCAAACGGATGTTCGCTTTA | 59.844 | 45.455 | 0.00 | 0.00 | 37.31 | 1.85 |
2615 | 2740 | 3.363182 | CGTCAAACGGATGTTCGCTTTAA | 60.363 | 43.478 | 0.00 | 0.00 | 37.31 | 1.52 |
2616 | 2741 | 3.904234 | GTCAAACGGATGTTCGCTTTAAC | 59.096 | 43.478 | 0.00 | 0.00 | 37.31 | 2.01 |
2617 | 2742 | 3.058777 | TCAAACGGATGTTCGCTTTAACC | 60.059 | 43.478 | 0.00 | 0.00 | 37.31 | 2.85 |
2618 | 2743 | 2.172851 | ACGGATGTTCGCTTTAACCA | 57.827 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2619 | 2744 | 2.496111 | ACGGATGTTCGCTTTAACCAA | 58.504 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
2620 | 2745 | 2.879646 | ACGGATGTTCGCTTTAACCAAA | 59.120 | 40.909 | 0.00 | 0.00 | 0.00 | 3.28 |
2621 | 2746 | 3.504520 | ACGGATGTTCGCTTTAACCAAAT | 59.495 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
2622 | 2747 | 4.022676 | ACGGATGTTCGCTTTAACCAAATT | 60.023 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2623 | 2748 | 4.920927 | CGGATGTTCGCTTTAACCAAATTT | 59.079 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2624 | 2749 | 5.060446 | CGGATGTTCGCTTTAACCAAATTTC | 59.940 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2625 | 2750 | 5.060446 | GGATGTTCGCTTTAACCAAATTTCG | 59.940 | 40.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2626 | 2751 | 4.922719 | TGTTCGCTTTAACCAAATTTCGT | 58.077 | 34.783 | 0.00 | 0.00 | 0.00 | 3.85 |
2627 | 2752 | 4.971220 | TGTTCGCTTTAACCAAATTTCGTC | 59.029 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
2628 | 2753 | 4.149910 | TCGCTTTAACCAAATTTCGTCC | 57.850 | 40.909 | 0.00 | 0.00 | 0.00 | 4.79 |
2629 | 2754 | 3.816523 | TCGCTTTAACCAAATTTCGTCCT | 59.183 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
2630 | 2755 | 4.276431 | TCGCTTTAACCAAATTTCGTCCTT | 59.724 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
2631 | 2756 | 4.979815 | CGCTTTAACCAAATTTCGTCCTTT | 59.020 | 37.500 | 0.00 | 0.00 | 0.00 | 3.11 |
2632 | 2757 | 5.108027 | CGCTTTAACCAAATTTCGTCCTTTG | 60.108 | 40.000 | 0.00 | 0.00 | 33.20 | 2.77 |
2637 | 2762 | 4.434713 | CCAAATTTCGTCCTTTGGGTAG | 57.565 | 45.455 | 13.81 | 0.00 | 44.97 | 3.18 |
2638 | 2763 | 3.192633 | CCAAATTTCGTCCTTTGGGTAGG | 59.807 | 47.826 | 13.81 | 0.00 | 44.97 | 3.18 |
2639 | 2764 | 4.076394 | CAAATTTCGTCCTTTGGGTAGGA | 58.924 | 43.478 | 0.00 | 0.00 | 42.02 | 2.94 |
2645 | 2770 | 1.200519 | TCCTTTGGGTAGGACGATGG | 58.799 | 55.000 | 0.00 | 0.00 | 39.40 | 3.51 |
2646 | 2771 | 0.180406 | CCTTTGGGTAGGACGATGGG | 59.820 | 60.000 | 0.00 | 0.00 | 37.50 | 4.00 |
2647 | 2772 | 0.180406 | CTTTGGGTAGGACGATGGGG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
2648 | 2773 | 0.548197 | TTTGGGTAGGACGATGGGGT | 60.548 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
2649 | 2774 | 0.979187 | TTGGGTAGGACGATGGGGTC | 60.979 | 60.000 | 0.00 | 0.00 | 36.18 | 4.46 |
2657 | 2782 | 3.900892 | CGATGGGGTCGTCTCCGG | 61.901 | 72.222 | 0.00 | 0.00 | 45.19 | 5.14 |
2658 | 2783 | 2.441532 | GATGGGGTCGTCTCCGGA | 60.442 | 66.667 | 2.93 | 2.93 | 33.95 | 5.14 |
2659 | 2784 | 2.758737 | ATGGGGTCGTCTCCGGAC | 60.759 | 66.667 | 0.00 | 0.00 | 38.97 | 4.79 |
2667 | 2792 | 2.675772 | GTCTCCGGACGTGTCCCT | 60.676 | 66.667 | 13.24 | 0.00 | 46.96 | 4.20 |
2668 | 2793 | 2.675423 | TCTCCGGACGTGTCCCTG | 60.675 | 66.667 | 13.24 | 5.31 | 46.96 | 4.45 |
2669 | 2794 | 3.760035 | CTCCGGACGTGTCCCTGG | 61.760 | 72.222 | 13.24 | 9.66 | 46.96 | 4.45 |
2672 | 2797 | 3.075005 | CGGACGTGTCCCTGGGAT | 61.075 | 66.667 | 20.40 | 1.66 | 46.96 | 3.85 |
2673 | 2798 | 2.584608 | GGACGTGTCCCTGGGATG | 59.415 | 66.667 | 20.40 | 14.28 | 43.94 | 3.51 |
2674 | 2799 | 2.125106 | GACGTGTCCCTGGGATGC | 60.125 | 66.667 | 20.40 | 13.53 | 32.73 | 3.91 |
2675 | 2800 | 2.607750 | ACGTGTCCCTGGGATGCT | 60.608 | 61.111 | 20.40 | 0.00 | 32.73 | 3.79 |
2676 | 2801 | 2.124983 | CGTGTCCCTGGGATGCTG | 60.125 | 66.667 | 20.40 | 5.78 | 32.73 | 4.41 |
2677 | 2802 | 2.959484 | CGTGTCCCTGGGATGCTGT | 61.959 | 63.158 | 20.40 | 0.00 | 32.73 | 4.40 |
2678 | 2803 | 1.377725 | GTGTCCCTGGGATGCTGTG | 60.378 | 63.158 | 20.40 | 0.00 | 32.73 | 3.66 |
2679 | 2804 | 2.273449 | GTCCCTGGGATGCTGTGG | 59.727 | 66.667 | 20.40 | 0.00 | 32.73 | 4.17 |
2680 | 2805 | 3.731728 | TCCCTGGGATGCTGTGGC | 61.732 | 66.667 | 12.53 | 0.00 | 39.26 | 5.01 |
2681 | 2806 | 3.736224 | CCCTGGGATGCTGTGGCT | 61.736 | 66.667 | 7.01 | 0.00 | 39.59 | 4.75 |
2682 | 2807 | 2.439701 | CCTGGGATGCTGTGGCTG | 60.440 | 66.667 | 0.00 | 0.00 | 39.59 | 4.85 |
2683 | 2808 | 2.672908 | CTGGGATGCTGTGGCTGA | 59.327 | 61.111 | 0.00 | 0.00 | 39.59 | 4.26 |
2684 | 2809 | 1.226542 | CTGGGATGCTGTGGCTGAT | 59.773 | 57.895 | 0.00 | 0.00 | 39.59 | 2.90 |
2685 | 2810 | 1.077285 | TGGGATGCTGTGGCTGATG | 60.077 | 57.895 | 0.00 | 0.00 | 39.59 | 3.07 |
2686 | 2811 | 1.826921 | GGGATGCTGTGGCTGATGG | 60.827 | 63.158 | 0.00 | 0.00 | 39.59 | 3.51 |
2687 | 2812 | 1.225426 | GGATGCTGTGGCTGATGGA | 59.775 | 57.895 | 0.00 | 0.00 | 39.59 | 3.41 |
2688 | 2813 | 0.178998 | GGATGCTGTGGCTGATGGAT | 60.179 | 55.000 | 0.00 | 0.00 | 39.59 | 3.41 |
2689 | 2814 | 1.688772 | GATGCTGTGGCTGATGGATT | 58.311 | 50.000 | 0.00 | 0.00 | 39.59 | 3.01 |
2690 | 2815 | 2.487805 | GGATGCTGTGGCTGATGGATTA | 60.488 | 50.000 | 0.00 | 0.00 | 39.59 | 1.75 |
2691 | 2816 | 3.418995 | GATGCTGTGGCTGATGGATTAT | 58.581 | 45.455 | 0.00 | 0.00 | 39.59 | 1.28 |
2692 | 2817 | 2.578786 | TGCTGTGGCTGATGGATTATG | 58.421 | 47.619 | 0.00 | 0.00 | 39.59 | 1.90 |
2693 | 2818 | 1.884579 | GCTGTGGCTGATGGATTATGG | 59.115 | 52.381 | 0.00 | 0.00 | 35.22 | 2.74 |
2694 | 2819 | 2.487805 | GCTGTGGCTGATGGATTATGGA | 60.488 | 50.000 | 0.00 | 0.00 | 35.22 | 3.41 |
2695 | 2820 | 3.813240 | GCTGTGGCTGATGGATTATGGAT | 60.813 | 47.826 | 0.00 | 0.00 | 35.22 | 3.41 |
2696 | 2821 | 3.756963 | CTGTGGCTGATGGATTATGGATG | 59.243 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
2697 | 2822 | 3.087031 | GTGGCTGATGGATTATGGATGG | 58.913 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2698 | 2823 | 2.042026 | TGGCTGATGGATTATGGATGGG | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2699 | 2824 | 2.097825 | GCTGATGGATTATGGATGGGC | 58.902 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
2700 | 2825 | 2.291411 | GCTGATGGATTATGGATGGGCT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2701 | 2826 | 3.816842 | GCTGATGGATTATGGATGGGCTT | 60.817 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
2702 | 2827 | 3.762288 | CTGATGGATTATGGATGGGCTTG | 59.238 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
2703 | 2828 | 2.681319 | TGGATTATGGATGGGCTTGG | 57.319 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2704 | 2829 | 1.147608 | TGGATTATGGATGGGCTTGGG | 59.852 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
2705 | 2830 | 1.260544 | GATTATGGATGGGCTTGGGC | 58.739 | 55.000 | 0.00 | 0.00 | 37.82 | 5.36 |
2717 | 2842 | 2.656947 | GCTTGGGCCCATATAAGACA | 57.343 | 50.000 | 29.23 | 6.87 | 0.00 | 3.41 |
2718 | 2843 | 2.944129 | GCTTGGGCCCATATAAGACAA | 58.056 | 47.619 | 29.23 | 5.98 | 0.00 | 3.18 |
2719 | 2844 | 3.500343 | GCTTGGGCCCATATAAGACAAT | 58.500 | 45.455 | 29.23 | 0.00 | 0.00 | 2.71 |
2720 | 2845 | 4.662278 | GCTTGGGCCCATATAAGACAATA | 58.338 | 43.478 | 29.23 | 4.45 | 0.00 | 1.90 |
2721 | 2846 | 5.076873 | GCTTGGGCCCATATAAGACAATAA | 58.923 | 41.667 | 29.23 | 4.21 | 0.00 | 1.40 |
2722 | 2847 | 5.716703 | GCTTGGGCCCATATAAGACAATAAT | 59.283 | 40.000 | 29.23 | 0.00 | 0.00 | 1.28 |
2723 | 2848 | 6.127619 | GCTTGGGCCCATATAAGACAATAATC | 60.128 | 42.308 | 29.23 | 0.14 | 0.00 | 1.75 |
2724 | 2849 | 5.826643 | TGGGCCCATATAAGACAATAATCC | 58.173 | 41.667 | 24.45 | 0.00 | 0.00 | 3.01 |
2725 | 2850 | 5.201243 | GGGCCCATATAAGACAATAATCCC | 58.799 | 45.833 | 19.95 | 0.00 | 0.00 | 3.85 |
2726 | 2851 | 5.044105 | GGGCCCATATAAGACAATAATCCCT | 60.044 | 44.000 | 19.95 | 0.00 | 0.00 | 4.20 |
2727 | 2852 | 6.159751 | GGGCCCATATAAGACAATAATCCCTA | 59.840 | 42.308 | 19.95 | 0.00 | 0.00 | 3.53 |
2728 | 2853 | 7.283329 | GGCCCATATAAGACAATAATCCCTAG | 58.717 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
2729 | 2854 | 7.092399 | GGCCCATATAAGACAATAATCCCTAGT | 60.092 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
2730 | 2855 | 8.329502 | GCCCATATAAGACAATAATCCCTAGTT | 58.670 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
2742 | 2867 | 9.660180 | CAATAATCCCTAGTTAATCTCTAAGGC | 57.340 | 37.037 | 0.00 | 0.00 | 0.00 | 4.35 |
2743 | 2868 | 6.689663 | AATCCCTAGTTAATCTCTAAGGCC | 57.310 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
2744 | 2869 | 4.490706 | TCCCTAGTTAATCTCTAAGGCCC | 58.509 | 47.826 | 0.00 | 0.00 | 0.00 | 5.80 |
2745 | 2870 | 4.078219 | TCCCTAGTTAATCTCTAAGGCCCA | 60.078 | 45.833 | 0.00 | 0.00 | 0.00 | 5.36 |
2746 | 2871 | 4.846940 | CCCTAGTTAATCTCTAAGGCCCAT | 59.153 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
2747 | 2872 | 5.280215 | CCCTAGTTAATCTCTAAGGCCCATG | 60.280 | 48.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2748 | 2873 | 4.092116 | AGTTAATCTCTAAGGCCCATGC | 57.908 | 45.455 | 0.00 | 0.00 | 0.00 | 4.06 |
2749 | 2874 | 3.459598 | AGTTAATCTCTAAGGCCCATGCA | 59.540 | 43.478 | 0.00 | 0.00 | 40.13 | 3.96 |
2750 | 2875 | 4.105377 | AGTTAATCTCTAAGGCCCATGCAT | 59.895 | 41.667 | 0.00 | 0.00 | 40.13 | 3.96 |
2751 | 2876 | 3.607490 | AATCTCTAAGGCCCATGCATT | 57.393 | 42.857 | 0.00 | 0.00 | 44.83 | 3.56 |
2752 | 2877 | 3.607490 | ATCTCTAAGGCCCATGCATTT | 57.393 | 42.857 | 0.00 | 0.00 | 38.57 | 2.32 |
2753 | 2878 | 2.658285 | TCTCTAAGGCCCATGCATTTG | 58.342 | 47.619 | 0.00 | 0.00 | 38.57 | 2.32 |
2754 | 2879 | 2.025037 | TCTCTAAGGCCCATGCATTTGT | 60.025 | 45.455 | 0.00 | 0.00 | 38.57 | 2.83 |
2755 | 2880 | 2.100252 | CTCTAAGGCCCATGCATTTGTG | 59.900 | 50.000 | 0.00 | 0.00 | 38.57 | 3.33 |
2756 | 2881 | 0.536260 | TAAGGCCCATGCATTTGTGC | 59.464 | 50.000 | 0.00 | 0.00 | 38.57 | 4.57 |
2757 | 2882 | 2.509786 | GGCCCATGCATTTGTGCG | 60.510 | 61.111 | 0.00 | 0.00 | 40.13 | 5.34 |
2758 | 2883 | 2.509786 | GCCCATGCATTTGTGCGG | 60.510 | 61.111 | 0.00 | 0.00 | 37.69 | 5.69 |
2759 | 2884 | 2.509786 | CCCATGCATTTGTGCGGC | 60.510 | 61.111 | 0.00 | 0.00 | 37.69 | 6.53 |
2760 | 2885 | 2.261981 | CCATGCATTTGTGCGGCA | 59.738 | 55.556 | 0.00 | 0.00 | 42.43 | 5.69 |
2761 | 2886 | 1.374378 | CCATGCATTTGTGCGGCAA | 60.374 | 52.632 | 3.23 | 0.00 | 41.43 | 4.52 |
2762 | 2887 | 1.355796 | CCATGCATTTGTGCGGCAAG | 61.356 | 55.000 | 3.23 | 0.00 | 41.43 | 4.01 |
2763 | 2888 | 0.668096 | CATGCATTTGTGCGGCAAGT | 60.668 | 50.000 | 3.23 | 0.00 | 41.43 | 3.16 |
2764 | 2889 | 0.668096 | ATGCATTTGTGCGGCAAGTG | 60.668 | 50.000 | 3.23 | 10.50 | 44.51 | 3.16 |
2765 | 2890 | 2.023223 | GCATTTGTGCGGCAAGTGG | 61.023 | 57.895 | 3.23 | 0.00 | 42.72 | 4.00 |
2766 | 2891 | 1.363443 | CATTTGTGCGGCAAGTGGT | 59.637 | 52.632 | 3.23 | 0.00 | 39.99 | 4.16 |
2767 | 2892 | 0.940519 | CATTTGTGCGGCAAGTGGTG | 60.941 | 55.000 | 3.23 | 0.00 | 39.99 | 4.17 |
2768 | 2893 | 2.086251 | ATTTGTGCGGCAAGTGGTGG | 62.086 | 55.000 | 3.23 | 0.00 | 38.47 | 4.61 |
2770 | 2895 | 4.947147 | GTGCGGCAAGTGGTGGGA | 62.947 | 66.667 | 3.23 | 0.00 | 0.00 | 4.37 |
2771 | 2896 | 4.196778 | TGCGGCAAGTGGTGGGAA | 62.197 | 61.111 | 0.00 | 0.00 | 0.00 | 3.97 |
2772 | 2897 | 3.365265 | GCGGCAAGTGGTGGGAAG | 61.365 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
2773 | 2898 | 2.113139 | CGGCAAGTGGTGGGAAGT | 59.887 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
2774 | 2899 | 2.260869 | CGGCAAGTGGTGGGAAGTG | 61.261 | 63.158 | 0.00 | 0.00 | 0.00 | 3.16 |
2775 | 2900 | 1.152756 | GGCAAGTGGTGGGAAGTGT | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
2776 | 2901 | 1.455383 | GGCAAGTGGTGGGAAGTGTG | 61.455 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2777 | 2902 | 1.455383 | GCAAGTGGTGGGAAGTGTGG | 61.455 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2778 | 2903 | 0.823356 | CAAGTGGTGGGAAGTGTGGG | 60.823 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2779 | 2904 | 0.991355 | AAGTGGTGGGAAGTGTGGGA | 60.991 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2780 | 2905 | 1.073199 | GTGGTGGGAAGTGTGGGAG | 59.927 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
2781 | 2906 | 1.385347 | TGGTGGGAAGTGTGGGAGT | 60.385 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
2782 | 2907 | 1.073199 | GGTGGGAAGTGTGGGAGTG | 59.927 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
2783 | 2908 | 1.415672 | GGTGGGAAGTGTGGGAGTGA | 61.416 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2784 | 2909 | 0.035458 | GTGGGAAGTGTGGGAGTGAG | 59.965 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2785 | 2910 | 0.105194 | TGGGAAGTGTGGGAGTGAGA | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2786 | 2911 | 0.321996 | GGGAAGTGTGGGAGTGAGAC | 59.678 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2787 | 2912 | 0.321996 | GGAAGTGTGGGAGTGAGACC | 59.678 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2788 | 2913 | 1.343069 | GAAGTGTGGGAGTGAGACCT | 58.657 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2789 | 2914 | 1.273886 | GAAGTGTGGGAGTGAGACCTC | 59.726 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
2790 | 2915 | 0.485099 | AGTGTGGGAGTGAGACCTCT | 59.515 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2791 | 2916 | 1.133009 | AGTGTGGGAGTGAGACCTCTT | 60.133 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
2792 | 2917 | 1.694696 | GTGTGGGAGTGAGACCTCTTT | 59.305 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
2793 | 2918 | 2.897969 | GTGTGGGAGTGAGACCTCTTTA | 59.102 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2794 | 2919 | 3.515901 | GTGTGGGAGTGAGACCTCTTTAT | 59.484 | 47.826 | 0.00 | 0.00 | 0.00 | 1.40 |
2795 | 2920 | 4.710375 | GTGTGGGAGTGAGACCTCTTTATA | 59.290 | 45.833 | 0.00 | 0.00 | 0.00 | 0.98 |
2796 | 2921 | 5.187186 | GTGTGGGAGTGAGACCTCTTTATAA | 59.813 | 44.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2797 | 2922 | 5.422331 | TGTGGGAGTGAGACCTCTTTATAAG | 59.578 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 0.037697 | AATGACCGCTGCTCACGTAA | 60.038 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1 | 2 | 0.735978 | CAATGACCGCTGCTCACGTA | 60.736 | 55.000 | 0.00 | 0.00 | 0.00 | 3.57 |
2 | 3 | 2.029288 | CAATGACCGCTGCTCACGT | 61.029 | 57.895 | 0.00 | 0.00 | 0.00 | 4.49 |
3 | 4 | 2.780643 | CAATGACCGCTGCTCACG | 59.219 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
4 | 5 | 2.482374 | GCAATGACCGCTGCTCAC | 59.518 | 61.111 | 0.00 | 0.00 | 35.62 | 3.51 |
5 | 6 | 3.120385 | CGCAATGACCGCTGCTCA | 61.120 | 61.111 | 0.00 | 0.00 | 36.38 | 4.26 |
6 | 7 | 3.088500 | GACGCAATGACCGCTGCTC | 62.089 | 63.158 | 0.00 | 0.00 | 36.38 | 4.26 |
7 | 8 | 3.121030 | GACGCAATGACCGCTGCT | 61.121 | 61.111 | 0.00 | 0.00 | 36.38 | 4.24 |
8 | 9 | 4.166011 | GGACGCAATGACCGCTGC | 62.166 | 66.667 | 0.00 | 0.00 | 35.14 | 5.25 |
21 | 22 | 4.143333 | AATGAGTCGCCCCGGACG | 62.143 | 66.667 | 0.73 | 6.79 | 41.81 | 4.79 |
22 | 23 | 2.202892 | GAATGAGTCGCCCCGGAC | 60.203 | 66.667 | 0.73 | 0.00 | 37.19 | 4.79 |
23 | 24 | 3.833645 | CGAATGAGTCGCCCCGGA | 61.834 | 66.667 | 0.73 | 0.00 | 44.14 | 5.14 |
58 | 59 | 6.067217 | AGTTTACGGAGGGAGTACTTACTA | 57.933 | 41.667 | 0.00 | 0.00 | 36.50 | 1.82 |
59 | 60 | 4.928263 | AGTTTACGGAGGGAGTACTTACT | 58.072 | 43.478 | 0.00 | 0.00 | 39.71 | 2.24 |
60 | 61 | 6.759497 | TTAGTTTACGGAGGGAGTACTTAC | 57.241 | 41.667 | 0.00 | 0.00 | 0.00 | 2.34 |
62 | 63 | 9.646522 | TTATATTAGTTTACGGAGGGAGTACTT | 57.353 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
63 | 64 | 9.646522 | TTTATATTAGTTTACGGAGGGAGTACT | 57.353 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
129 | 130 | 7.653713 | CGACAGTTGGACTATTAATCTGCTTAT | 59.346 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
149 | 150 | 0.402504 | AGAGTCTCCAGTCCGACAGT | 59.597 | 55.000 | 0.40 | 0.00 | 32.68 | 3.55 |
153 | 154 | 1.629353 | ACACTAGAGTCTCCAGTCCGA | 59.371 | 52.381 | 0.00 | 0.00 | 0.00 | 4.55 |
154 | 155 | 2.011222 | GACACTAGAGTCTCCAGTCCG | 58.989 | 57.143 | 12.51 | 0.00 | 35.65 | 4.79 |
155 | 156 | 3.074675 | TGACACTAGAGTCTCCAGTCC | 57.925 | 52.381 | 19.21 | 0.00 | 39.27 | 3.85 |
166 | 167 | 6.863275 | TCGATAGATTTTGCTTGACACTAGA | 58.137 | 36.000 | 0.00 | 0.00 | 42.67 | 2.43 |
184 | 185 | 5.455849 | CGTCACCTGTTTTATCTGTCGATAG | 59.544 | 44.000 | 2.20 | 2.20 | 33.85 | 2.08 |
186 | 187 | 4.082408 | TCGTCACCTGTTTTATCTGTCGAT | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 3.59 |
187 | 188 | 3.253921 | TCGTCACCTGTTTTATCTGTCGA | 59.746 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
188 | 189 | 3.364023 | GTCGTCACCTGTTTTATCTGTCG | 59.636 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
189 | 190 | 4.304110 | TGTCGTCACCTGTTTTATCTGTC | 58.696 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
190 | 191 | 4.330944 | TGTCGTCACCTGTTTTATCTGT | 57.669 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
191 | 192 | 4.509970 | TGTTGTCGTCACCTGTTTTATCTG | 59.490 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
192 | 193 | 4.510340 | GTGTTGTCGTCACCTGTTTTATCT | 59.490 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
193 | 194 | 4.271533 | TGTGTTGTCGTCACCTGTTTTATC | 59.728 | 41.667 | 0.00 | 0.00 | 35.25 | 1.75 |
194 | 195 | 4.034742 | GTGTGTTGTCGTCACCTGTTTTAT | 59.965 | 41.667 | 0.00 | 0.00 | 35.25 | 1.40 |
195 | 196 | 3.371591 | GTGTGTTGTCGTCACCTGTTTTA | 59.628 | 43.478 | 0.00 | 0.00 | 35.25 | 1.52 |
196 | 197 | 2.160813 | GTGTGTTGTCGTCACCTGTTTT | 59.839 | 45.455 | 0.00 | 0.00 | 35.25 | 2.43 |
198 | 199 | 1.365699 | GTGTGTTGTCGTCACCTGTT | 58.634 | 50.000 | 0.00 | 0.00 | 35.25 | 3.16 |
199 | 200 | 0.804544 | CGTGTGTTGTCGTCACCTGT | 60.805 | 55.000 | 0.00 | 0.00 | 35.25 | 4.00 |
200 | 201 | 0.526739 | TCGTGTGTTGTCGTCACCTG | 60.527 | 55.000 | 0.00 | 0.00 | 35.25 | 4.00 |
201 | 202 | 0.387929 | ATCGTGTGTTGTCGTCACCT | 59.612 | 50.000 | 0.00 | 0.00 | 35.25 | 4.00 |
202 | 203 | 1.214367 | AATCGTGTGTTGTCGTCACC | 58.786 | 50.000 | 0.00 | 0.00 | 35.25 | 4.02 |
203 | 204 | 3.313274 | AAAATCGTGTGTTGTCGTCAC | 57.687 | 42.857 | 0.00 | 0.00 | 36.48 | 3.67 |
204 | 205 | 3.125487 | ACAAAAATCGTGTGTTGTCGTCA | 59.875 | 39.130 | 0.00 | 0.00 | 28.08 | 4.35 |
205 | 206 | 3.477090 | CACAAAAATCGTGTGTTGTCGTC | 59.523 | 43.478 | 0.00 | 0.00 | 41.22 | 4.20 |
227 | 228 | 0.168788 | ATGCATGTGCGTTGTGCTAC | 59.831 | 50.000 | 0.00 | 0.00 | 46.63 | 3.58 |
254 | 255 | 1.770110 | AAGATGGATAGCGGGGCCA | 60.770 | 57.895 | 4.39 | 0.00 | 35.91 | 5.36 |
267 | 268 | 1.416813 | GCTCTGCGTCGACCAAGATG | 61.417 | 60.000 | 10.58 | 8.20 | 0.00 | 2.90 |
282 | 283 | 2.121385 | TGTCCCTCCAGCTGCTCT | 59.879 | 61.111 | 8.66 | 0.00 | 0.00 | 4.09 |
304 | 306 | 1.390664 | CGATCGACGTTACGTTGCGT | 61.391 | 55.000 | 19.21 | 15.15 | 41.37 | 5.24 |
305 | 307 | 1.121850 | TCGATCGACGTTACGTTGCG | 61.122 | 55.000 | 19.21 | 17.09 | 41.37 | 4.85 |
306 | 308 | 0.976963 | TTCGATCGACGTTACGTTGC | 59.023 | 50.000 | 19.26 | 6.49 | 41.37 | 4.17 |
307 | 309 | 2.024875 | CAGTTCGATCGACGTTACGTTG | 59.975 | 50.000 | 19.26 | 18.09 | 41.37 | 4.10 |
308 | 310 | 2.236690 | CAGTTCGATCGACGTTACGTT | 58.763 | 47.619 | 19.26 | 0.00 | 41.37 | 3.99 |
309 | 311 | 1.464687 | CCAGTTCGATCGACGTTACGT | 60.465 | 52.381 | 19.26 | 11.12 | 45.10 | 3.57 |
317 | 319 | 3.215151 | AGCTTATCTCCAGTTCGATCGA | 58.785 | 45.455 | 15.15 | 15.15 | 0.00 | 3.59 |
319 | 321 | 4.846779 | AGAGCTTATCTCCAGTTCGATC | 57.153 | 45.455 | 0.00 | 0.00 | 42.90 | 3.69 |
345 | 347 | 3.556365 | GTCCTTGGATCGTTAAAGCTAGC | 59.444 | 47.826 | 6.62 | 6.62 | 0.00 | 3.42 |
377 | 383 | 5.092968 | AGGAGAGGAGAATTCCATGGATAG | 58.907 | 45.833 | 17.06 | 0.00 | 46.64 | 2.08 |
532 | 555 | 3.407967 | TCAATCGGCCCAGGGGTC | 61.408 | 66.667 | 7.91 | 2.82 | 37.65 | 4.46 |
555 | 578 | 1.298488 | GTAGCTAGGTCGACAGCGC | 60.298 | 63.158 | 18.91 | 15.15 | 42.74 | 5.92 |
579 | 605 | 4.148825 | CGGTTCTCGGGAGGCCAG | 62.149 | 72.222 | 5.01 | 0.00 | 34.75 | 4.85 |
799 | 835 | 2.352001 | CCGTCGTCGCTGTATCGG | 60.352 | 66.667 | 0.00 | 0.00 | 35.54 | 4.18 |
950 | 999 | 2.155279 | TCGTCAGAGACAGAACTCCAG | 58.845 | 52.381 | 0.00 | 0.00 | 37.60 | 3.86 |
1386 | 1441 | 2.419021 | GGCATGCATGTGCTGGTTAATT | 60.419 | 45.455 | 26.79 | 0.00 | 44.45 | 1.40 |
1387 | 1442 | 1.137479 | GGCATGCATGTGCTGGTTAAT | 59.863 | 47.619 | 26.79 | 0.00 | 44.45 | 1.40 |
1388 | 1443 | 0.531657 | GGCATGCATGTGCTGGTTAA | 59.468 | 50.000 | 26.79 | 0.00 | 44.45 | 2.01 |
1389 | 1444 | 0.611340 | TGGCATGCATGTGCTGGTTA | 60.611 | 50.000 | 26.79 | 3.38 | 44.45 | 2.85 |
1400 | 1455 | 1.889262 | GCATGGAGGATATGGCATGCA | 60.889 | 52.381 | 21.36 | 6.13 | 43.22 | 3.96 |
1428 | 1487 | 2.223409 | TGAACTAATGATCGACGACCGG | 60.223 | 50.000 | 0.00 | 0.00 | 39.14 | 5.28 |
1445 | 1504 | 4.204573 | GCGACTCACGTATCTGTAATGAAC | 59.795 | 45.833 | 0.00 | 0.00 | 44.60 | 3.18 |
1446 | 1505 | 4.348656 | GCGACTCACGTATCTGTAATGAA | 58.651 | 43.478 | 0.00 | 0.00 | 44.60 | 2.57 |
1447 | 1506 | 3.545426 | CGCGACTCACGTATCTGTAATGA | 60.545 | 47.826 | 0.00 | 0.00 | 44.60 | 2.57 |
1448 | 1507 | 2.714480 | CGCGACTCACGTATCTGTAATG | 59.286 | 50.000 | 0.00 | 0.00 | 44.60 | 1.90 |
1449 | 1508 | 2.353889 | ACGCGACTCACGTATCTGTAAT | 59.646 | 45.455 | 15.93 | 0.00 | 43.02 | 1.89 |
1450 | 1509 | 1.733912 | ACGCGACTCACGTATCTGTAA | 59.266 | 47.619 | 15.93 | 0.00 | 43.02 | 2.41 |
1451 | 1510 | 1.061566 | CACGCGACTCACGTATCTGTA | 59.938 | 52.381 | 15.93 | 0.00 | 42.96 | 2.74 |
1452 | 1511 | 0.179197 | CACGCGACTCACGTATCTGT | 60.179 | 55.000 | 15.93 | 0.00 | 42.96 | 3.41 |
1461 | 1520 | 0.460109 | ATTAGCATGCACGCGACTCA | 60.460 | 50.000 | 21.98 | 7.72 | 36.85 | 3.41 |
1469 | 1528 | 1.062587 | GACGACACCATTAGCATGCAC | 59.937 | 52.381 | 21.98 | 0.00 | 0.00 | 4.57 |
1596 | 1655 | 0.041312 | CGCAGCTGCTAACGTTGTTT | 60.041 | 50.000 | 34.22 | 0.00 | 39.32 | 2.83 |
1618 | 1677 | 1.202627 | GCTCTCATCCTTCGCCTTCAT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
1620 | 1679 | 0.873743 | CGCTCTCATCCTTCGCCTTC | 60.874 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1621 | 1680 | 1.142748 | CGCTCTCATCCTTCGCCTT | 59.857 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
1622 | 1681 | 2.055042 | ACGCTCTCATCCTTCGCCT | 61.055 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
1710 | 1769 | 4.308458 | TCGTGCAGGTCAACCCCG | 62.308 | 66.667 | 6.26 | 0.00 | 36.42 | 5.73 |
1812 | 1871 | 3.734776 | TCGACGTACACAGATGTAGTG | 57.265 | 47.619 | 0.00 | 0.00 | 42.06 | 2.74 |
1923 | 2014 | 0.183492 | GCTTGCATGTGGGATCCCTA | 59.817 | 55.000 | 31.05 | 20.19 | 36.94 | 3.53 |
1924 | 2015 | 1.076485 | GCTTGCATGTGGGATCCCT | 60.076 | 57.895 | 31.05 | 8.97 | 36.94 | 4.20 |
1925 | 2016 | 1.380246 | TGCTTGCATGTGGGATCCC | 60.380 | 57.895 | 25.22 | 25.22 | 0.00 | 3.85 |
1986 | 2078 | 1.707239 | GAGTCGACGGAGCAGATCGT | 61.707 | 60.000 | 10.46 | 0.00 | 42.67 | 3.73 |
2037 | 2142 | 2.354305 | AGACACGGTTCGCGTGAC | 60.354 | 61.111 | 18.72 | 13.20 | 40.22 | 3.67 |
2074 | 2183 | 2.126071 | CGACGACGCCACAGGAAT | 60.126 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
2103 | 2212 | 6.127786 | ACGTTCTCTATAGGTAACAGTGGTTC | 60.128 | 42.308 | 14.52 | 0.00 | 38.45 | 3.62 |
2110 | 2221 | 7.086376 | GTGAAACACGTTCTCTATAGGTAACA | 58.914 | 38.462 | 14.52 | 0.00 | 37.13 | 2.41 |
2139 | 2253 | 0.461548 | TTCTAGAGCGACATGGGCAG | 59.538 | 55.000 | 12.69 | 2.95 | 0.00 | 4.85 |
2169 | 2283 | 0.969894 | AGAGGAGAACACAGGAACGG | 59.030 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
2223 | 2338 | 2.011349 | CGCGTTCTGGATCGATCGG | 61.011 | 63.158 | 18.81 | 13.79 | 0.00 | 4.18 |
2224 | 2339 | 2.639926 | GCGCGTTCTGGATCGATCG | 61.640 | 63.158 | 18.81 | 9.36 | 0.00 | 3.69 |
2247 | 2362 | 2.436292 | CCTCTCGTCGTCTCCGGT | 60.436 | 66.667 | 0.00 | 0.00 | 33.95 | 5.28 |
2265 | 2380 | 4.838486 | CGACAGCGACGCTCCTCC | 62.838 | 72.222 | 21.67 | 8.21 | 36.40 | 4.30 |
2437 | 2553 | 3.069318 | GCCGAACCGTCCTCTCCT | 61.069 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
2490 | 2615 | 0.474614 | TCGTTTCCACCACCCATTGA | 59.525 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2491 | 2616 | 0.596082 | GTCGTTTCCACCACCCATTG | 59.404 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
2564 | 2689 | 1.275291 | TCGAGTTGGAGTTGGCCTTAG | 59.725 | 52.381 | 3.32 | 0.00 | 0.00 | 2.18 |
2565 | 2690 | 1.001633 | GTCGAGTTGGAGTTGGCCTTA | 59.998 | 52.381 | 3.32 | 0.00 | 0.00 | 2.69 |
2566 | 2691 | 0.250338 | GTCGAGTTGGAGTTGGCCTT | 60.250 | 55.000 | 3.32 | 0.00 | 0.00 | 4.35 |
2567 | 2692 | 1.371558 | GTCGAGTTGGAGTTGGCCT | 59.628 | 57.895 | 3.32 | 0.00 | 0.00 | 5.19 |
2568 | 2693 | 1.671379 | GGTCGAGTTGGAGTTGGCC | 60.671 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
2569 | 2694 | 2.027625 | CGGTCGAGTTGGAGTTGGC | 61.028 | 63.158 | 0.00 | 0.00 | 0.00 | 4.52 |
2570 | 2695 | 2.027625 | GCGGTCGAGTTGGAGTTGG | 61.028 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
2571 | 2696 | 2.372690 | CGCGGTCGAGTTGGAGTTG | 61.373 | 63.158 | 0.00 | 0.00 | 38.10 | 3.16 |
2572 | 2697 | 2.049433 | CGCGGTCGAGTTGGAGTT | 60.049 | 61.111 | 0.00 | 0.00 | 38.10 | 3.01 |
2573 | 2698 | 4.719369 | GCGCGGTCGAGTTGGAGT | 62.719 | 66.667 | 8.83 | 0.00 | 38.10 | 3.85 |
2583 | 2708 | 4.405173 | GTTTGACGTCGCGCGGTC | 62.405 | 66.667 | 31.69 | 28.23 | 46.52 | 4.79 |
2587 | 2712 | 3.475774 | ATCCGTTTGACGTCGCGC | 61.476 | 61.111 | 11.62 | 0.00 | 40.58 | 6.86 |
2588 | 2713 | 1.882682 | AACATCCGTTTGACGTCGCG | 61.883 | 55.000 | 11.62 | 14.55 | 40.58 | 5.87 |
2589 | 2714 | 0.179258 | GAACATCCGTTTGACGTCGC | 60.179 | 55.000 | 11.62 | 2.81 | 40.58 | 5.19 |
2590 | 2715 | 0.090676 | CGAACATCCGTTTGACGTCG | 59.909 | 55.000 | 11.62 | 0.00 | 40.58 | 5.12 |
2591 | 2716 | 0.179258 | GCGAACATCCGTTTGACGTC | 60.179 | 55.000 | 9.11 | 9.11 | 40.58 | 4.34 |
2592 | 2717 | 0.599204 | AGCGAACATCCGTTTGACGT | 60.599 | 50.000 | 0.00 | 0.00 | 40.58 | 4.34 |
2593 | 2718 | 0.511221 | AAGCGAACATCCGTTTGACG | 59.489 | 50.000 | 0.00 | 0.00 | 38.62 | 4.35 |
2594 | 2719 | 2.681152 | AAAGCGAACATCCGTTTGAC | 57.319 | 45.000 | 0.00 | 0.00 | 38.62 | 3.18 |
2595 | 2720 | 3.058777 | GGTTAAAGCGAACATCCGTTTGA | 60.059 | 43.478 | 0.00 | 0.00 | 38.62 | 2.69 |
2596 | 2721 | 3.231160 | GGTTAAAGCGAACATCCGTTTG | 58.769 | 45.455 | 0.00 | 0.00 | 39.25 | 2.93 |
2597 | 2722 | 2.879646 | TGGTTAAAGCGAACATCCGTTT | 59.120 | 40.909 | 0.00 | 0.00 | 34.75 | 3.60 |
2598 | 2723 | 2.496111 | TGGTTAAAGCGAACATCCGTT | 58.504 | 42.857 | 0.00 | 0.00 | 38.33 | 4.44 |
2599 | 2724 | 2.172851 | TGGTTAAAGCGAACATCCGT | 57.827 | 45.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2600 | 2725 | 3.546002 | TTTGGTTAAAGCGAACATCCG | 57.454 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
2601 | 2726 | 5.060446 | CGAAATTTGGTTAAAGCGAACATCC | 59.940 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2602 | 2727 | 5.627780 | ACGAAATTTGGTTAAAGCGAACATC | 59.372 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2603 | 2728 | 5.525199 | ACGAAATTTGGTTAAAGCGAACAT | 58.475 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
2604 | 2729 | 4.922719 | ACGAAATTTGGTTAAAGCGAACA | 58.077 | 34.783 | 0.00 | 0.00 | 0.00 | 3.18 |
2605 | 2730 | 4.380678 | GGACGAAATTTGGTTAAAGCGAAC | 59.619 | 41.667 | 7.31 | 0.00 | 0.00 | 3.95 |
2606 | 2731 | 4.276431 | AGGACGAAATTTGGTTAAAGCGAA | 59.724 | 37.500 | 7.31 | 0.00 | 0.00 | 4.70 |
2607 | 2732 | 3.816523 | AGGACGAAATTTGGTTAAAGCGA | 59.183 | 39.130 | 7.31 | 0.00 | 0.00 | 4.93 |
2608 | 2733 | 4.155310 | AGGACGAAATTTGGTTAAAGCG | 57.845 | 40.909 | 7.31 | 0.00 | 0.00 | 4.68 |
2609 | 2734 | 5.176774 | CCAAAGGACGAAATTTGGTTAAAGC | 59.823 | 40.000 | 7.31 | 0.00 | 46.79 | 3.51 |
2610 | 2735 | 6.763303 | CCAAAGGACGAAATTTGGTTAAAG | 57.237 | 37.500 | 7.31 | 0.00 | 46.79 | 1.85 |
2617 | 2742 | 4.076394 | TCCTACCCAAAGGACGAAATTTG | 58.924 | 43.478 | 0.00 | 0.00 | 40.86 | 2.32 |
2618 | 2743 | 4.376225 | TCCTACCCAAAGGACGAAATTT | 57.624 | 40.909 | 0.00 | 0.00 | 40.86 | 1.82 |
2626 | 2751 | 1.200519 | CCATCGTCCTACCCAAAGGA | 58.799 | 55.000 | 0.00 | 0.00 | 43.58 | 3.36 |
2627 | 2752 | 0.180406 | CCCATCGTCCTACCCAAAGG | 59.820 | 60.000 | 0.00 | 0.00 | 38.06 | 3.11 |
2628 | 2753 | 0.180406 | CCCCATCGTCCTACCCAAAG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2629 | 2754 | 0.548197 | ACCCCATCGTCCTACCCAAA | 60.548 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2630 | 2755 | 0.979187 | GACCCCATCGTCCTACCCAA | 60.979 | 60.000 | 0.00 | 0.00 | 0.00 | 4.12 |
2631 | 2756 | 1.382146 | GACCCCATCGTCCTACCCA | 60.382 | 63.158 | 0.00 | 0.00 | 0.00 | 4.51 |
2632 | 2757 | 2.496291 | CGACCCCATCGTCCTACCC | 61.496 | 68.421 | 0.00 | 0.00 | 46.25 | 3.69 |
2633 | 2758 | 3.126528 | CGACCCCATCGTCCTACC | 58.873 | 66.667 | 0.00 | 0.00 | 46.25 | 3.18 |
2657 | 2782 | 2.125106 | GCATCCCAGGGACACGTC | 60.125 | 66.667 | 11.70 | 0.00 | 32.98 | 4.34 |
2658 | 2783 | 2.607750 | AGCATCCCAGGGACACGT | 60.608 | 61.111 | 11.70 | 0.00 | 32.98 | 4.49 |
2659 | 2784 | 2.124983 | CAGCATCCCAGGGACACG | 60.125 | 66.667 | 11.70 | 3.38 | 32.98 | 4.49 |
2660 | 2785 | 1.377725 | CACAGCATCCCAGGGACAC | 60.378 | 63.158 | 11.70 | 5.81 | 32.98 | 3.67 |
2661 | 2786 | 2.605607 | CCACAGCATCCCAGGGACA | 61.606 | 63.158 | 11.70 | 0.00 | 32.98 | 4.02 |
2662 | 2787 | 2.273449 | CCACAGCATCCCAGGGAC | 59.727 | 66.667 | 11.70 | 0.00 | 32.98 | 4.46 |
2663 | 2788 | 3.731728 | GCCACAGCATCCCAGGGA | 61.732 | 66.667 | 11.90 | 11.90 | 39.53 | 4.20 |
2664 | 2789 | 3.736224 | AGCCACAGCATCCCAGGG | 61.736 | 66.667 | 0.00 | 0.00 | 43.56 | 4.45 |
2665 | 2790 | 2.280404 | ATCAGCCACAGCATCCCAGG | 62.280 | 60.000 | 0.00 | 0.00 | 43.56 | 4.45 |
2666 | 2791 | 1.101635 | CATCAGCCACAGCATCCCAG | 61.102 | 60.000 | 0.00 | 0.00 | 43.56 | 4.45 |
2667 | 2792 | 1.077285 | CATCAGCCACAGCATCCCA | 60.077 | 57.895 | 0.00 | 0.00 | 43.56 | 4.37 |
2668 | 2793 | 1.826921 | CCATCAGCCACAGCATCCC | 60.827 | 63.158 | 0.00 | 0.00 | 43.56 | 3.85 |
2669 | 2794 | 0.178998 | ATCCATCAGCCACAGCATCC | 60.179 | 55.000 | 0.00 | 0.00 | 43.56 | 3.51 |
2670 | 2795 | 1.688772 | AATCCATCAGCCACAGCATC | 58.311 | 50.000 | 0.00 | 0.00 | 43.56 | 3.91 |
2671 | 2796 | 3.154710 | CATAATCCATCAGCCACAGCAT | 58.845 | 45.455 | 0.00 | 0.00 | 43.56 | 3.79 |
2672 | 2797 | 2.578786 | CATAATCCATCAGCCACAGCA | 58.421 | 47.619 | 0.00 | 0.00 | 43.56 | 4.41 |
2673 | 2798 | 1.884579 | CCATAATCCATCAGCCACAGC | 59.115 | 52.381 | 0.00 | 0.00 | 40.32 | 4.40 |
2674 | 2799 | 3.497103 | TCCATAATCCATCAGCCACAG | 57.503 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
2675 | 2800 | 3.499021 | CCATCCATAATCCATCAGCCACA | 60.499 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
2676 | 2801 | 3.087031 | CCATCCATAATCCATCAGCCAC | 58.913 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2677 | 2802 | 2.042026 | CCCATCCATAATCCATCAGCCA | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2678 | 2803 | 2.731572 | CCCATCCATAATCCATCAGCC | 58.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
2679 | 2804 | 2.097825 | GCCCATCCATAATCCATCAGC | 58.902 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
2680 | 2805 | 3.733883 | AGCCCATCCATAATCCATCAG | 57.266 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
2681 | 2806 | 3.500836 | CCAAGCCCATCCATAATCCATCA | 60.501 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
2682 | 2807 | 3.094572 | CCAAGCCCATCCATAATCCATC | 58.905 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2683 | 2808 | 2.225445 | CCCAAGCCCATCCATAATCCAT | 60.225 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2684 | 2809 | 1.147608 | CCCAAGCCCATCCATAATCCA | 59.852 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2685 | 2810 | 1.928868 | CCCAAGCCCATCCATAATCC | 58.071 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2686 | 2811 | 1.260544 | GCCCAAGCCCATCCATAATC | 58.739 | 55.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2687 | 2812 | 3.463045 | GCCCAAGCCCATCCATAAT | 57.537 | 52.632 | 0.00 | 0.00 | 0.00 | 1.28 |
2698 | 2823 | 2.656947 | TGTCTTATATGGGCCCAAGC | 57.343 | 50.000 | 32.58 | 17.18 | 38.76 | 4.01 |
2699 | 2824 | 6.378280 | GGATTATTGTCTTATATGGGCCCAAG | 59.622 | 42.308 | 32.58 | 22.28 | 0.00 | 3.61 |
2700 | 2825 | 6.252995 | GGATTATTGTCTTATATGGGCCCAA | 58.747 | 40.000 | 32.58 | 18.94 | 0.00 | 4.12 |
2701 | 2826 | 5.281506 | GGGATTATTGTCTTATATGGGCCCA | 60.282 | 44.000 | 30.92 | 30.92 | 0.00 | 5.36 |
2702 | 2827 | 5.044105 | AGGGATTATTGTCTTATATGGGCCC | 60.044 | 44.000 | 17.59 | 17.59 | 0.00 | 5.80 |
2703 | 2828 | 6.079712 | AGGGATTATTGTCTTATATGGGCC | 57.920 | 41.667 | 0.00 | 0.00 | 0.00 | 5.80 |
2704 | 2829 | 7.862675 | ACTAGGGATTATTGTCTTATATGGGC | 58.137 | 38.462 | 0.00 | 0.00 | 0.00 | 5.36 |
2716 | 2841 | 9.660180 | GCCTTAGAGATTAACTAGGGATTATTG | 57.340 | 37.037 | 0.00 | 0.00 | 38.73 | 1.90 |
2717 | 2842 | 8.827758 | GGCCTTAGAGATTAACTAGGGATTATT | 58.172 | 37.037 | 0.00 | 0.00 | 38.73 | 1.40 |
2718 | 2843 | 7.403522 | GGGCCTTAGAGATTAACTAGGGATTAT | 59.596 | 40.741 | 0.84 | 0.00 | 38.73 | 1.28 |
2719 | 2844 | 6.729569 | GGGCCTTAGAGATTAACTAGGGATTA | 59.270 | 42.308 | 0.84 | 0.00 | 38.73 | 1.75 |
2720 | 2845 | 5.548446 | GGGCCTTAGAGATTAACTAGGGATT | 59.452 | 44.000 | 0.84 | 0.00 | 38.73 | 3.01 |
2721 | 2846 | 5.095097 | GGGCCTTAGAGATTAACTAGGGAT | 58.905 | 45.833 | 0.84 | 0.00 | 38.73 | 3.85 |
2722 | 2847 | 4.078219 | TGGGCCTTAGAGATTAACTAGGGA | 60.078 | 45.833 | 4.53 | 0.00 | 38.73 | 4.20 |
2723 | 2848 | 4.232091 | TGGGCCTTAGAGATTAACTAGGG | 58.768 | 47.826 | 4.53 | 0.00 | 39.20 | 3.53 |
2724 | 2849 | 5.799213 | CATGGGCCTTAGAGATTAACTAGG | 58.201 | 45.833 | 4.53 | 0.00 | 0.00 | 3.02 |
2725 | 2850 | 5.221722 | TGCATGGGCCTTAGAGATTAACTAG | 60.222 | 44.000 | 4.53 | 0.00 | 40.13 | 2.57 |
2726 | 2851 | 4.658435 | TGCATGGGCCTTAGAGATTAACTA | 59.342 | 41.667 | 4.53 | 0.00 | 40.13 | 2.24 |
2727 | 2852 | 3.459598 | TGCATGGGCCTTAGAGATTAACT | 59.540 | 43.478 | 4.53 | 0.00 | 40.13 | 2.24 |
2728 | 2853 | 3.820557 | TGCATGGGCCTTAGAGATTAAC | 58.179 | 45.455 | 4.53 | 0.00 | 40.13 | 2.01 |
2729 | 2854 | 4.729552 | ATGCATGGGCCTTAGAGATTAA | 57.270 | 40.909 | 4.53 | 0.00 | 40.13 | 1.40 |
2730 | 2855 | 4.729552 | AATGCATGGGCCTTAGAGATTA | 57.270 | 40.909 | 4.53 | 0.00 | 40.13 | 1.75 |
2731 | 2856 | 3.607490 | AATGCATGGGCCTTAGAGATT | 57.393 | 42.857 | 4.53 | 0.00 | 40.13 | 2.40 |
2732 | 2857 | 3.228453 | CAAATGCATGGGCCTTAGAGAT | 58.772 | 45.455 | 4.53 | 0.00 | 40.13 | 2.75 |
2733 | 2858 | 2.025037 | ACAAATGCATGGGCCTTAGAGA | 60.025 | 45.455 | 4.53 | 0.00 | 40.13 | 3.10 |
2734 | 2859 | 2.100252 | CACAAATGCATGGGCCTTAGAG | 59.900 | 50.000 | 4.53 | 0.00 | 40.13 | 2.43 |
2735 | 2860 | 2.101783 | CACAAATGCATGGGCCTTAGA | 58.898 | 47.619 | 4.53 | 0.00 | 40.13 | 2.10 |
2736 | 2861 | 2.589798 | CACAAATGCATGGGCCTTAG | 57.410 | 50.000 | 4.53 | 0.00 | 40.13 | 2.18 |
2748 | 2873 | 0.940519 | CACCACTTGCCGCACAAATG | 60.941 | 55.000 | 0.00 | 0.00 | 37.96 | 2.32 |
2749 | 2874 | 1.363443 | CACCACTTGCCGCACAAAT | 59.637 | 52.632 | 0.00 | 0.00 | 37.96 | 2.32 |
2750 | 2875 | 2.780094 | CCACCACTTGCCGCACAAA | 61.780 | 57.895 | 0.00 | 0.00 | 37.96 | 2.83 |
2751 | 2876 | 3.215568 | CCACCACTTGCCGCACAA | 61.216 | 61.111 | 0.00 | 0.00 | 36.62 | 3.33 |
2753 | 2878 | 4.947147 | TCCCACCACTTGCCGCAC | 62.947 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
2754 | 2879 | 4.196778 | TTCCCACCACTTGCCGCA | 62.197 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
2755 | 2880 | 3.365265 | CTTCCCACCACTTGCCGC | 61.365 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
2756 | 2881 | 2.113139 | ACTTCCCACCACTTGCCG | 59.887 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
2757 | 2882 | 1.152756 | ACACTTCCCACCACTTGCC | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 4.52 |
2758 | 2883 | 1.455383 | CCACACTTCCCACCACTTGC | 61.455 | 60.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2759 | 2884 | 0.823356 | CCCACACTTCCCACCACTTG | 60.823 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2760 | 2885 | 0.991355 | TCCCACACTTCCCACCACTT | 60.991 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2761 | 2886 | 1.385347 | TCCCACACTTCCCACCACT | 60.385 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
2762 | 2887 | 1.073199 | CTCCCACACTTCCCACCAC | 59.927 | 63.158 | 0.00 | 0.00 | 0.00 | 4.16 |
2763 | 2888 | 1.385347 | ACTCCCACACTTCCCACCA | 60.385 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
2764 | 2889 | 1.073199 | CACTCCCACACTTCCCACC | 59.927 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
2765 | 2890 | 0.035458 | CTCACTCCCACACTTCCCAC | 59.965 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2766 | 2891 | 0.105194 | TCTCACTCCCACACTTCCCA | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2767 | 2892 | 0.321996 | GTCTCACTCCCACACTTCCC | 59.678 | 60.000 | 0.00 | 0.00 | 0.00 | 3.97 |
2768 | 2893 | 0.321996 | GGTCTCACTCCCACACTTCC | 59.678 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2769 | 2894 | 1.273886 | GAGGTCTCACTCCCACACTTC | 59.726 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
2770 | 2895 | 1.133009 | AGAGGTCTCACTCCCACACTT | 60.133 | 52.381 | 0.55 | 0.00 | 38.26 | 3.16 |
2771 | 2896 | 0.485099 | AGAGGTCTCACTCCCACACT | 59.515 | 55.000 | 0.55 | 0.00 | 38.26 | 3.55 |
2772 | 2897 | 1.343069 | AAGAGGTCTCACTCCCACAC | 58.657 | 55.000 | 0.55 | 0.00 | 38.26 | 3.82 |
2773 | 2898 | 2.103153 | AAAGAGGTCTCACTCCCACA | 57.897 | 50.000 | 0.55 | 0.00 | 38.26 | 4.17 |
2774 | 2899 | 5.908341 | CTTATAAAGAGGTCTCACTCCCAC | 58.092 | 45.833 | 0.55 | 0.00 | 38.26 | 4.61 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.