Multiple sequence alignment - TraesCS6D01G199100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G199100 chr6D 100.000 2546 0 0 1 2546 277060173 277062718 0.000000e+00 4702.0
1 TraesCS6D01G199100 chr6D 91.455 433 30 4 29 455 144544213 144543782 2.820000e-164 588.0
2 TraesCS6D01G199100 chr6B 92.221 1337 57 17 701 2005 438959564 438960885 0.000000e+00 1849.0
3 TraesCS6D01G199100 chr6B 93.750 448 24 3 11 455 466856051 466855605 0.000000e+00 669.0
4 TraesCS6D01G199100 chr6B 87.067 433 45 8 29 455 257575615 257575188 1.770000e-131 479.0
5 TraesCS6D01G199100 chr6A 91.585 1117 47 17 566 1652 398540984 398539885 0.000000e+00 1498.0
6 TraesCS6D01G199100 chr6A 94.311 457 24 2 2090 2546 398538346 398537892 0.000000e+00 699.0
7 TraesCS6D01G199100 chr6A 94.602 352 17 1 106 455 49840381 49840732 6.190000e-151 544.0
8 TraesCS6D01G199100 chr6A 88.101 437 29 8 1648 2072 398538760 398538335 4.890000e-137 497.0
9 TraesCS6D01G199100 chr6A 88.889 144 13 3 2090 2233 441199598 441199458 9.360000e-40 174.0
10 TraesCS6D01G199100 chr6A 88.194 144 14 3 2090 2233 441131740 441131600 4.360000e-38 169.0
11 TraesCS6D01G199100 chr1D 94.643 448 18 4 11 455 368127386 368126942 0.000000e+00 689.0
12 TraesCS6D01G199100 chrUn 95.338 429 17 2 29 454 1068807 1068379 0.000000e+00 678.0
13 TraesCS6D01G199100 chr1B 94.183 447 22 2 12 456 98729219 98728775 0.000000e+00 678.0
14 TraesCS6D01G199100 chr1B 92.453 53 2 1 446 496 437608309 437608361 9.770000e-10 75.0
15 TraesCS6D01G199100 chr5B 93.987 449 23 3 11 456 592790388 592789941 0.000000e+00 676.0
16 TraesCS6D01G199100 chr5B 90.000 140 10 4 2090 2229 584139296 584139161 7.240000e-41 178.0
17 TraesCS6D01G199100 chr7B 93.458 428 24 2 32 455 343177753 343177326 1.290000e-177 632.0
18 TraesCS6D01G199100 chr7B 75.510 196 37 8 254 444 728074903 728075092 4.510000e-13 86.1
19 TraesCS6D01G199100 chr7D 89.855 483 10 7 11 458 130239775 130240253 3.650000e-163 584.0
20 TraesCS6D01G199100 chr7D 100.000 31 0 0 1 31 130239752 130239782 9.840000e-05 58.4
21 TraesCS6D01G199100 chr2B 83.105 219 31 5 2018 2230 117622807 117623025 7.190000e-46 195.0
22 TraesCS6D01G199100 chr2B 91.057 123 9 2 2108 2230 146991543 146991423 5.640000e-37 165.0
23 TraesCS6D01G199100 chr2A 90.000 140 10 4 2090 2229 733386989 733387124 7.240000e-41 178.0
24 TraesCS6D01G199100 chr2A 92.500 120 8 1 2111 2230 94157148 94157030 1.210000e-38 171.0
25 TraesCS6D01G199100 chr2D 88.571 140 12 2 2090 2229 599276032 599276167 1.570000e-37 167.0
26 TraesCS6D01G199100 chr3B 96.296 54 2 0 2019 2072 745539624 745539571 3.490000e-14 89.8
27 TraesCS6D01G199100 chr3B 100.000 40 0 0 457 496 763492340 763492301 9.770000e-10 75.0
28 TraesCS6D01G199100 chr3B 100.000 39 0 0 457 495 412508933 412508895 3.510000e-09 73.1
29 TraesCS6D01G199100 chr7A 100.000 37 0 0 460 496 232639343 232639307 4.550000e-08 69.4
30 TraesCS6D01G199100 chr5D 100.000 36 0 0 460 495 470053865 470053830 1.630000e-07 67.6
31 TraesCS6D01G199100 chr4B 90.385 52 3 1 446 495 613038814 613038865 1.630000e-07 67.6
32 TraesCS6D01G199100 chr3D 97.436 39 1 0 457 495 471073037 471072999 1.630000e-07 67.6
33 TraesCS6D01G199100 chr3D 90.385 52 3 1 446 495 471074151 471074202 1.630000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G199100 chr6D 277060173 277062718 2545 False 4702.0 4702 100.000000 1 2546 1 chr6D.!!$F1 2545
1 TraesCS6D01G199100 chr6B 438959564 438960885 1321 False 1849.0 1849 92.221000 701 2005 1 chr6B.!!$F1 1304
2 TraesCS6D01G199100 chr6A 398537892 398540984 3092 True 898.0 1498 91.332333 566 2546 3 chr6A.!!$R3 1980
3 TraesCS6D01G199100 chr7D 130239752 130240253 501 False 321.2 584 94.927500 1 458 2 chr7D.!!$F1 457

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
284 298 0.038310 GAGGGAAAAGGAGGTGGGTG 59.962 60.0 0.0 0.0 0.0 4.61 F
293 307 0.107017 GGAGGTGGGTGGATGACATG 60.107 60.0 0.0 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1158 1234 0.03779 GGTCGAGTCAGAAAGCAGCT 60.038 55.0 0.0 0.0 0.0 4.24 R
1715 2951 0.10212 GACTCCACTGCCTGATCGAG 59.898 60.0 0.0 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 61 2.736826 GGCTCCTCCCTTTCCTCCG 61.737 68.421 0.00 0.00 0.00 4.63
118 132 0.108898 CTGTGTCCCAGCGAGAGAAG 60.109 60.000 0.00 0.00 33.59 2.85
119 133 1.216710 GTGTCCCAGCGAGAGAAGG 59.783 63.158 0.00 0.00 0.00 3.46
120 134 2.185608 GTCCCAGCGAGAGAAGGC 59.814 66.667 0.00 0.00 0.00 4.35
121 135 3.077556 TCCCAGCGAGAGAAGGCC 61.078 66.667 0.00 0.00 0.00 5.19
122 136 4.521062 CCCAGCGAGAGAAGGCCG 62.521 72.222 0.00 0.00 0.00 6.13
123 137 4.521062 CCAGCGAGAGAAGGCCGG 62.521 72.222 0.00 0.00 0.00 6.13
124 138 4.521062 CAGCGAGAGAAGGCCGGG 62.521 72.222 2.18 0.00 0.00 5.73
175 189 4.100084 CCATGGCCGCACCTGAGA 62.100 66.667 0.00 0.00 40.22 3.27
176 190 2.191375 CATGGCCGCACCTGAGAT 59.809 61.111 0.00 0.00 40.22 2.75
177 191 2.184830 CATGGCCGCACCTGAGATG 61.185 63.158 0.00 0.00 40.22 2.90
178 192 4.783621 TGGCCGCACCTGAGATGC 62.784 66.667 0.00 0.00 40.22 3.91
179 193 4.783621 GGCCGCACCTGAGATGCA 62.784 66.667 0.00 0.00 43.57 3.96
180 194 3.503363 GCCGCACCTGAGATGCAC 61.503 66.667 0.00 0.00 43.57 4.57
181 195 2.821366 CCGCACCTGAGATGCACC 60.821 66.667 0.00 0.00 43.57 5.01
182 196 2.046988 CGCACCTGAGATGCACCA 60.047 61.111 0.00 0.00 43.57 4.17
183 197 2.393768 CGCACCTGAGATGCACCAC 61.394 63.158 0.00 0.00 43.57 4.16
184 198 2.042831 GCACCTGAGATGCACCACC 61.043 63.158 0.00 0.00 42.88 4.61
185 199 1.742880 CACCTGAGATGCACCACCG 60.743 63.158 0.00 0.00 0.00 4.94
186 200 2.821366 CCTGAGATGCACCACCGC 60.821 66.667 0.00 0.00 0.00 5.68
188 202 2.046988 TGAGATGCACCACCGCAG 60.047 61.111 0.00 0.00 46.99 5.18
212 226 4.087892 GCTTCCGCTGGAGCTCCA 62.088 66.667 33.04 33.04 45.30 3.86
213 227 2.906458 CTTCCGCTGGAGCTCCAT 59.094 61.111 35.11 0.00 46.46 3.41
214 228 1.523258 CTTCCGCTGGAGCTCCATG 60.523 63.158 35.11 27.81 46.46 3.66
215 229 2.937379 CTTCCGCTGGAGCTCCATGG 62.937 65.000 33.55 33.55 46.46 3.66
225 239 4.100084 CTCCATGGCCGCACCTGA 62.100 66.667 6.96 0.00 40.22 3.86
226 240 4.100084 TCCATGGCCGCACCTGAG 62.100 66.667 6.96 0.00 40.22 3.35
228 242 4.100084 CATGGCCGCACCTGAGGA 62.100 66.667 4.99 0.00 40.22 3.71
229 243 3.790437 ATGGCCGCACCTGAGGAG 61.790 66.667 4.99 0.00 40.22 3.69
232 246 4.459089 GCCGCACCTGAGGAGGAC 62.459 72.222 4.99 0.00 42.93 3.85
233 247 4.135153 CCGCACCTGAGGAGGACG 62.135 72.222 4.99 2.73 42.93 4.79
234 248 4.135153 CGCACCTGAGGAGGACGG 62.135 72.222 4.99 0.00 42.93 4.79
235 249 3.775654 GCACCTGAGGAGGACGGG 61.776 72.222 4.99 0.00 42.93 5.28
236 250 3.077556 CACCTGAGGAGGACGGGG 61.078 72.222 4.99 0.00 42.93 5.73
237 251 3.273654 ACCTGAGGAGGACGGGGA 61.274 66.667 4.99 0.00 42.93 4.81
238 252 2.038975 CCTGAGGAGGACGGGGAA 59.961 66.667 0.00 0.00 42.93 3.97
239 253 2.060980 CCTGAGGAGGACGGGGAAG 61.061 68.421 0.00 0.00 42.93 3.46
240 254 2.038975 TGAGGAGGACGGGGAAGG 59.961 66.667 0.00 0.00 0.00 3.46
241 255 2.363361 GAGGAGGACGGGGAAGGA 59.637 66.667 0.00 0.00 0.00 3.36
242 256 1.758906 GAGGAGGACGGGGAAGGAG 60.759 68.421 0.00 0.00 0.00 3.69
243 257 2.226149 GAGGAGGACGGGGAAGGAGA 62.226 65.000 0.00 0.00 0.00 3.71
244 258 1.305887 GGAGGACGGGGAAGGAGAA 60.306 63.158 0.00 0.00 0.00 2.87
245 259 1.331399 GGAGGACGGGGAAGGAGAAG 61.331 65.000 0.00 0.00 0.00 2.85
246 260 0.324460 GAGGACGGGGAAGGAGAAGA 60.324 60.000 0.00 0.00 0.00 2.87
247 261 0.324830 AGGACGGGGAAGGAGAAGAG 60.325 60.000 0.00 0.00 0.00 2.85
248 262 1.331399 GGACGGGGAAGGAGAAGAGG 61.331 65.000 0.00 0.00 0.00 3.69
249 263 0.324460 GACGGGGAAGGAGAAGAGGA 60.324 60.000 0.00 0.00 0.00 3.71
250 264 0.340208 ACGGGGAAGGAGAAGAGGAT 59.660 55.000 0.00 0.00 0.00 3.24
251 265 0.755686 CGGGGAAGGAGAAGAGGATG 59.244 60.000 0.00 0.00 0.00 3.51
252 266 1.135960 GGGGAAGGAGAAGAGGATGG 58.864 60.000 0.00 0.00 0.00 3.51
253 267 1.135960 GGGAAGGAGAAGAGGATGGG 58.864 60.000 0.00 0.00 0.00 4.00
254 268 1.135960 GGAAGGAGAAGAGGATGGGG 58.864 60.000 0.00 0.00 0.00 4.96
255 269 1.344496 GGAAGGAGAAGAGGATGGGGA 60.344 57.143 0.00 0.00 0.00 4.81
256 270 2.482494 GAAGGAGAAGAGGATGGGGAA 58.518 52.381 0.00 0.00 0.00 3.97
257 271 2.188818 AGGAGAAGAGGATGGGGAAG 57.811 55.000 0.00 0.00 0.00 3.46
258 272 1.653918 AGGAGAAGAGGATGGGGAAGA 59.346 52.381 0.00 0.00 0.00 2.87
259 273 2.046447 AGGAGAAGAGGATGGGGAAGAA 59.954 50.000 0.00 0.00 0.00 2.52
260 274 2.437651 GGAGAAGAGGATGGGGAAGAAG 59.562 54.545 0.00 0.00 0.00 2.85
261 275 3.379452 GAGAAGAGGATGGGGAAGAAGA 58.621 50.000 0.00 0.00 0.00 2.87
262 276 3.777522 GAGAAGAGGATGGGGAAGAAGAA 59.222 47.826 0.00 0.00 0.00 2.52
263 277 3.779738 AGAAGAGGATGGGGAAGAAGAAG 59.220 47.826 0.00 0.00 0.00 2.85
264 278 3.498614 AGAGGATGGGGAAGAAGAAGA 57.501 47.619 0.00 0.00 0.00 2.87
265 279 3.383223 AGAGGATGGGGAAGAAGAAGAG 58.617 50.000 0.00 0.00 0.00 2.85
266 280 3.013417 AGAGGATGGGGAAGAAGAAGAGA 59.987 47.826 0.00 0.00 0.00 3.10
267 281 3.383223 AGGATGGGGAAGAAGAAGAGAG 58.617 50.000 0.00 0.00 0.00 3.20
268 282 2.437651 GGATGGGGAAGAAGAAGAGAGG 59.562 54.545 0.00 0.00 0.00 3.69
269 283 1.958288 TGGGGAAGAAGAAGAGAGGG 58.042 55.000 0.00 0.00 0.00 4.30
270 284 1.437149 TGGGGAAGAAGAAGAGAGGGA 59.563 52.381 0.00 0.00 0.00 4.20
271 285 2.158004 TGGGGAAGAAGAAGAGAGGGAA 60.158 50.000 0.00 0.00 0.00 3.97
272 286 2.913617 GGGGAAGAAGAAGAGAGGGAAA 59.086 50.000 0.00 0.00 0.00 3.13
273 287 3.330998 GGGGAAGAAGAAGAGAGGGAAAA 59.669 47.826 0.00 0.00 0.00 2.29
274 288 4.566697 GGGGAAGAAGAAGAGAGGGAAAAG 60.567 50.000 0.00 0.00 0.00 2.27
275 289 4.566697 GGGAAGAAGAAGAGAGGGAAAAGG 60.567 50.000 0.00 0.00 0.00 3.11
276 290 4.287326 GGAAGAAGAAGAGAGGGAAAAGGA 59.713 45.833 0.00 0.00 0.00 3.36
277 291 5.487433 GAAGAAGAAGAGAGGGAAAAGGAG 58.513 45.833 0.00 0.00 0.00 3.69
278 292 3.843619 AGAAGAAGAGAGGGAAAAGGAGG 59.156 47.826 0.00 0.00 0.00 4.30
279 293 3.283712 AGAAGAGAGGGAAAAGGAGGT 57.716 47.619 0.00 0.00 0.00 3.85
280 294 2.909662 AGAAGAGAGGGAAAAGGAGGTG 59.090 50.000 0.00 0.00 0.00 4.00
281 295 1.662686 AGAGAGGGAAAAGGAGGTGG 58.337 55.000 0.00 0.00 0.00 4.61
282 296 0.621082 GAGAGGGAAAAGGAGGTGGG 59.379 60.000 0.00 0.00 0.00 4.61
283 297 0.103876 AGAGGGAAAAGGAGGTGGGT 60.104 55.000 0.00 0.00 0.00 4.51
284 298 0.038310 GAGGGAAAAGGAGGTGGGTG 59.962 60.000 0.00 0.00 0.00 4.61
285 299 1.076727 GGGAAAAGGAGGTGGGTGG 59.923 63.158 0.00 0.00 0.00 4.61
286 300 1.432023 GGGAAAAGGAGGTGGGTGGA 61.432 60.000 0.00 0.00 0.00 4.02
287 301 0.704664 GGAAAAGGAGGTGGGTGGAT 59.295 55.000 0.00 0.00 0.00 3.41
288 302 1.616994 GGAAAAGGAGGTGGGTGGATG 60.617 57.143 0.00 0.00 0.00 3.51
289 303 1.354368 GAAAAGGAGGTGGGTGGATGA 59.646 52.381 0.00 0.00 0.00 2.92
290 304 0.698818 AAAGGAGGTGGGTGGATGAC 59.301 55.000 0.00 0.00 0.00 3.06
291 305 0.475632 AAGGAGGTGGGTGGATGACA 60.476 55.000 0.00 0.00 0.00 3.58
292 306 0.253347 AGGAGGTGGGTGGATGACAT 60.253 55.000 0.00 0.00 0.00 3.06
293 307 0.107017 GGAGGTGGGTGGATGACATG 60.107 60.000 0.00 0.00 0.00 3.21
294 308 0.620556 GAGGTGGGTGGATGACATGT 59.379 55.000 0.00 0.00 0.00 3.21
295 309 0.329261 AGGTGGGTGGATGACATGTG 59.671 55.000 1.15 0.00 0.00 3.21
296 310 0.680921 GGTGGGTGGATGACATGTGG 60.681 60.000 1.15 0.00 0.00 4.17
297 311 0.680921 GTGGGTGGATGACATGTGGG 60.681 60.000 1.15 0.00 0.00 4.61
298 312 0.844221 TGGGTGGATGACATGTGGGA 60.844 55.000 1.15 0.00 0.00 4.37
299 313 0.394352 GGGTGGATGACATGTGGGAC 60.394 60.000 1.15 0.00 0.00 4.46
300 314 0.394352 GGTGGATGACATGTGGGACC 60.394 60.000 1.15 1.93 0.00 4.46
301 315 0.394352 GTGGATGACATGTGGGACCC 60.394 60.000 1.15 2.45 0.00 4.46
302 316 0.844221 TGGATGACATGTGGGACCCA 60.844 55.000 9.95 9.95 0.00 4.51
311 325 3.562232 TGGGACCCACGTTCCACC 61.562 66.667 9.95 0.00 43.33 4.61
312 326 3.246880 GGGACCCACGTTCCACCT 61.247 66.667 5.33 0.00 37.63 4.00
313 327 2.346365 GGACCCACGTTCCACCTC 59.654 66.667 0.00 0.00 0.00 3.85
314 328 2.513259 GGACCCACGTTCCACCTCA 61.513 63.158 0.00 0.00 0.00 3.86
315 329 1.448497 GACCCACGTTCCACCTCAA 59.552 57.895 0.00 0.00 0.00 3.02
316 330 0.883370 GACCCACGTTCCACCTCAAC 60.883 60.000 0.00 0.00 0.00 3.18
317 331 1.147376 CCCACGTTCCACCTCAACA 59.853 57.895 0.00 0.00 0.00 3.33
318 332 0.464735 CCCACGTTCCACCTCAACAA 60.465 55.000 0.00 0.00 0.00 2.83
319 333 1.384525 CCACGTTCCACCTCAACAAA 58.615 50.000 0.00 0.00 0.00 2.83
320 334 1.333619 CCACGTTCCACCTCAACAAAG 59.666 52.381 0.00 0.00 0.00 2.77
321 335 2.014128 CACGTTCCACCTCAACAAAGT 58.986 47.619 0.00 0.00 0.00 2.66
322 336 2.014128 ACGTTCCACCTCAACAAAGTG 58.986 47.619 0.00 0.00 0.00 3.16
323 337 2.014128 CGTTCCACCTCAACAAAGTGT 58.986 47.619 0.00 0.00 0.00 3.55
324 338 3.199677 CGTTCCACCTCAACAAAGTGTA 58.800 45.455 0.00 0.00 0.00 2.90
325 339 3.001939 CGTTCCACCTCAACAAAGTGTAC 59.998 47.826 0.00 0.00 0.00 2.90
326 340 3.916359 TCCACCTCAACAAAGTGTACA 57.084 42.857 0.00 0.00 0.00 2.90
327 341 3.537580 TCCACCTCAACAAAGTGTACAC 58.462 45.455 18.56 18.56 0.00 2.90
328 342 3.055021 TCCACCTCAACAAAGTGTACACA 60.055 43.478 27.06 4.32 0.00 3.72
329 343 3.312421 CCACCTCAACAAAGTGTACACAG 59.688 47.826 27.06 17.96 0.00 3.66
330 344 4.188462 CACCTCAACAAAGTGTACACAGA 58.812 43.478 27.06 13.16 0.00 3.41
331 345 4.034048 CACCTCAACAAAGTGTACACAGAC 59.966 45.833 27.06 0.53 0.00 3.51
332 346 4.188462 CCTCAACAAAGTGTACACAGACA 58.812 43.478 27.06 4.12 0.00 3.41
333 347 4.816385 CCTCAACAAAGTGTACACAGACAT 59.184 41.667 27.06 8.15 0.00 3.06
334 348 5.277490 CCTCAACAAAGTGTACACAGACATG 60.277 44.000 27.06 18.60 0.00 3.21
335 349 4.035091 TCAACAAAGTGTACACAGACATGC 59.965 41.667 27.06 0.00 0.00 4.06
336 350 2.878406 ACAAAGTGTACACAGACATGCC 59.122 45.455 27.06 0.00 0.00 4.40
337 351 2.877786 CAAAGTGTACACAGACATGCCA 59.122 45.455 27.06 0.00 0.00 4.92
338 352 3.423539 AAGTGTACACAGACATGCCAT 57.576 42.857 27.06 0.00 0.00 4.40
339 353 2.703416 AGTGTACACAGACATGCCATG 58.297 47.619 27.06 2.40 0.00 3.66
341 355 2.813754 GTGTACACAGACATGCCATGTT 59.186 45.455 21.14 0.00 45.03 2.71
342 356 2.813172 TGTACACAGACATGCCATGTTG 59.187 45.455 12.36 13.64 45.03 3.33
343 357 1.250328 ACACAGACATGCCATGTTGG 58.750 50.000 12.36 9.67 45.03 3.77
344 358 1.202915 ACACAGACATGCCATGTTGGA 60.203 47.619 12.36 0.00 45.03 3.53
345 359 1.200716 CACAGACATGCCATGTTGGAC 59.799 52.381 12.36 0.00 45.03 4.02
346 360 0.813184 CAGACATGCCATGTTGGACC 59.187 55.000 12.36 0.00 45.03 4.46
347 361 0.677731 AGACATGCCATGTTGGACCG 60.678 55.000 12.36 0.00 45.03 4.79
348 362 0.676466 GACATGCCATGTTGGACCGA 60.676 55.000 12.36 0.00 45.03 4.69
349 363 0.960364 ACATGCCATGTTGGACCGAC 60.960 55.000 4.03 4.73 41.63 4.79
350 364 0.959867 CATGCCATGTTGGACCGACA 60.960 55.000 17.16 17.16 40.96 4.35
351 365 0.251121 ATGCCATGTTGGACCGACAA 60.251 50.000 18.70 2.45 40.96 3.18
352 366 0.888736 TGCCATGTTGGACCGACAAG 60.889 55.000 18.70 13.98 40.96 3.16
353 367 0.889186 GCCATGTTGGACCGACAAGT 60.889 55.000 18.70 0.02 40.96 3.16
354 368 0.874390 CCATGTTGGACCGACAAGTG 59.126 55.000 18.70 12.80 40.96 3.16
355 369 0.874390 CATGTTGGACCGACAAGTGG 59.126 55.000 18.70 5.39 31.00 4.00
356 370 0.250727 ATGTTGGACCGACAAGTGGG 60.251 55.000 18.70 0.00 31.00 4.61
357 371 1.147600 GTTGGACCGACAAGTGGGT 59.852 57.895 6.60 6.60 44.63 4.51
361 375 2.446994 ACCGACAAGTGGGTCCCA 60.447 61.111 6.47 6.47 37.03 4.37
370 384 2.288992 TGGGTCCCACCAGTCAGT 59.711 61.111 6.47 0.00 41.02 3.41
371 385 1.385347 TGGGTCCCACCAGTCAGTT 60.385 57.895 6.47 0.00 41.02 3.16
372 386 0.991355 TGGGTCCCACCAGTCAGTTT 60.991 55.000 6.47 0.00 41.02 2.66
373 387 0.185175 GGGTCCCACCAGTCAGTTTT 59.815 55.000 1.78 0.00 41.02 2.43
374 388 1.318576 GGTCCCACCAGTCAGTTTTG 58.681 55.000 0.00 0.00 38.42 2.44
375 389 0.668535 GTCCCACCAGTCAGTTTTGC 59.331 55.000 0.00 0.00 0.00 3.68
376 390 0.550914 TCCCACCAGTCAGTTTTGCT 59.449 50.000 0.00 0.00 0.00 3.91
377 391 0.670162 CCCACCAGTCAGTTTTGCTG 59.330 55.000 0.00 0.00 46.34 4.41
378 392 1.392589 CCACCAGTCAGTTTTGCTGT 58.607 50.000 0.00 0.00 45.23 4.40
379 393 1.750778 CCACCAGTCAGTTTTGCTGTT 59.249 47.619 0.00 0.00 45.23 3.16
380 394 2.166254 CCACCAGTCAGTTTTGCTGTTT 59.834 45.455 0.00 0.00 45.23 2.83
381 395 3.181397 CACCAGTCAGTTTTGCTGTTTG 58.819 45.455 0.00 0.00 45.23 2.93
382 396 2.825532 ACCAGTCAGTTTTGCTGTTTGT 59.174 40.909 0.00 0.00 45.23 2.83
383 397 3.181397 CCAGTCAGTTTTGCTGTTTGTG 58.819 45.455 0.00 0.00 45.23 3.33
384 398 2.599973 CAGTCAGTTTTGCTGTTTGTGC 59.400 45.455 0.00 0.00 45.23 4.57
385 399 1.583404 GTCAGTTTTGCTGTTTGTGCG 59.417 47.619 0.00 0.00 45.23 5.34
386 400 1.470494 TCAGTTTTGCTGTTTGTGCGA 59.530 42.857 0.00 0.00 45.23 5.10
387 401 1.847999 CAGTTTTGCTGTTTGTGCGAG 59.152 47.619 0.00 0.00 40.27 5.03
388 402 0.572125 GTTTTGCTGTTTGTGCGAGC 59.428 50.000 0.00 0.00 0.00 5.03
389 403 0.455410 TTTTGCTGTTTGTGCGAGCT 59.545 45.000 0.00 0.00 33.66 4.09
390 404 1.304254 TTTGCTGTTTGTGCGAGCTA 58.696 45.000 0.00 0.00 33.66 3.32
391 405 1.304254 TTGCTGTTTGTGCGAGCTAA 58.696 45.000 0.00 0.00 33.66 3.09
392 406 1.522668 TGCTGTTTGTGCGAGCTAAT 58.477 45.000 0.00 0.00 33.66 1.73
393 407 1.464608 TGCTGTTTGTGCGAGCTAATC 59.535 47.619 0.00 0.00 33.66 1.75
394 408 1.734465 GCTGTTTGTGCGAGCTAATCT 59.266 47.619 0.00 0.00 0.00 2.40
395 409 2.475187 GCTGTTTGTGCGAGCTAATCTG 60.475 50.000 0.00 0.00 0.00 2.90
396 410 2.738846 CTGTTTGTGCGAGCTAATCTGT 59.261 45.455 0.00 0.00 0.00 3.41
397 411 2.480037 TGTTTGTGCGAGCTAATCTGTG 59.520 45.455 0.00 0.00 0.00 3.66
398 412 2.736721 GTTTGTGCGAGCTAATCTGTGA 59.263 45.455 0.00 0.00 0.00 3.58
399 413 2.741759 TGTGCGAGCTAATCTGTGAA 57.258 45.000 0.00 0.00 0.00 3.18
400 414 3.251479 TGTGCGAGCTAATCTGTGAAT 57.749 42.857 0.00 0.00 0.00 2.57
401 415 3.190079 TGTGCGAGCTAATCTGTGAATC 58.810 45.455 0.00 0.00 0.00 2.52
402 416 2.217393 GTGCGAGCTAATCTGTGAATCG 59.783 50.000 0.00 0.00 0.00 3.34
403 417 1.789464 GCGAGCTAATCTGTGAATCGG 59.211 52.381 0.00 0.00 0.00 4.18
404 418 2.799917 GCGAGCTAATCTGTGAATCGGT 60.800 50.000 0.00 0.00 0.00 4.69
405 419 2.791560 CGAGCTAATCTGTGAATCGGTG 59.208 50.000 0.00 0.00 0.00 4.94
406 420 3.735208 CGAGCTAATCTGTGAATCGGTGT 60.735 47.826 0.00 0.00 0.00 4.16
407 421 3.525537 AGCTAATCTGTGAATCGGTGTG 58.474 45.455 0.00 0.00 0.00 3.82
408 422 3.195610 AGCTAATCTGTGAATCGGTGTGA 59.804 43.478 0.00 0.00 0.00 3.58
409 423 4.122776 GCTAATCTGTGAATCGGTGTGAT 58.877 43.478 0.00 0.00 39.67 3.06
420 434 5.607119 AATCGGTGTGATTTGTTACTCAC 57.393 39.130 0.00 0.00 45.06 3.51
421 435 4.330944 TCGGTGTGATTTGTTACTCACT 57.669 40.909 5.15 0.00 41.83 3.41
422 436 4.699637 TCGGTGTGATTTGTTACTCACTT 58.300 39.130 5.15 0.00 41.83 3.16
423 437 5.845103 TCGGTGTGATTTGTTACTCACTTA 58.155 37.500 5.15 0.00 41.83 2.24
424 438 5.693104 TCGGTGTGATTTGTTACTCACTTAC 59.307 40.000 5.15 0.00 41.83 2.34
425 439 5.107220 CGGTGTGATTTGTTACTCACTTACC 60.107 44.000 5.15 4.52 41.83 2.85
426 440 5.995897 GGTGTGATTTGTTACTCACTTACCT 59.004 40.000 5.15 0.00 41.83 3.08
427 441 6.147328 GGTGTGATTTGTTACTCACTTACCTC 59.853 42.308 5.15 0.00 41.83 3.85
428 442 6.704493 GTGTGATTTGTTACTCACTTACCTCA 59.296 38.462 5.15 0.00 41.83 3.86
429 443 6.929049 TGTGATTTGTTACTCACTTACCTCAG 59.071 38.462 5.15 0.00 41.83 3.35
430 444 7.152645 GTGATTTGTTACTCACTTACCTCAGA 58.847 38.462 0.00 0.00 38.94 3.27
431 445 7.329717 GTGATTTGTTACTCACTTACCTCAGAG 59.670 40.741 0.00 0.00 38.94 3.35
432 446 6.726490 TTTGTTACTCACTTACCTCAGAGT 57.274 37.500 0.00 0.00 43.25 3.24
433 447 6.726490 TTGTTACTCACTTACCTCAGAGTT 57.274 37.500 0.00 0.00 41.27 3.01
434 448 6.085555 TGTTACTCACTTACCTCAGAGTTG 57.914 41.667 0.00 0.00 41.27 3.16
435 449 5.010719 TGTTACTCACTTACCTCAGAGTTGG 59.989 44.000 0.00 0.00 41.27 3.77
436 450 3.577919 ACTCACTTACCTCAGAGTTGGT 58.422 45.455 0.00 0.00 38.08 3.67
437 451 3.322254 ACTCACTTACCTCAGAGTTGGTG 59.678 47.826 0.00 0.93 38.08 4.17
438 452 2.632996 TCACTTACCTCAGAGTTGGTGG 59.367 50.000 0.00 0.00 37.74 4.61
439 453 2.368875 CACTTACCTCAGAGTTGGTGGT 59.631 50.000 0.00 0.00 37.74 4.16
440 454 3.046374 ACTTACCTCAGAGTTGGTGGTT 58.954 45.455 0.00 0.00 37.74 3.67
441 455 3.458487 ACTTACCTCAGAGTTGGTGGTTT 59.542 43.478 0.00 0.00 37.74 3.27
442 456 4.079958 ACTTACCTCAGAGTTGGTGGTTTT 60.080 41.667 0.00 0.00 37.74 2.43
443 457 3.382083 ACCTCAGAGTTGGTGGTTTTT 57.618 42.857 0.00 0.00 34.90 1.94
464 478 4.864704 TTGTGATTTTTGAACCCTAGCC 57.135 40.909 0.00 0.00 0.00 3.93
465 479 3.838565 TGTGATTTTTGAACCCTAGCCA 58.161 40.909 0.00 0.00 0.00 4.75
466 480 3.572255 TGTGATTTTTGAACCCTAGCCAC 59.428 43.478 0.00 0.00 0.00 5.01
467 481 3.572255 GTGATTTTTGAACCCTAGCCACA 59.428 43.478 0.00 0.00 0.00 4.17
468 482 4.038642 GTGATTTTTGAACCCTAGCCACAA 59.961 41.667 0.00 0.00 0.00 3.33
469 483 4.651503 TGATTTTTGAACCCTAGCCACAAA 59.348 37.500 0.00 0.00 0.00 2.83
470 484 5.306678 TGATTTTTGAACCCTAGCCACAAAT 59.693 36.000 0.00 0.00 32.05 2.32
471 485 4.599047 TTTTGAACCCTAGCCACAAATG 57.401 40.909 0.00 0.00 32.05 2.32
472 486 2.969821 TGAACCCTAGCCACAAATGT 57.030 45.000 0.00 0.00 0.00 2.71
473 487 2.513753 TGAACCCTAGCCACAAATGTG 58.486 47.619 6.57 6.57 45.23 3.21
483 497 2.886862 CACAAATGTGGTGGCTTTGA 57.113 45.000 5.63 0.00 42.10 2.69
484 498 2.746269 CACAAATGTGGTGGCTTTGAG 58.254 47.619 5.63 0.00 42.10 3.02
485 499 1.069049 ACAAATGTGGTGGCTTTGAGC 59.931 47.619 2.18 0.00 41.46 4.26
486 500 1.068895 CAAATGTGGTGGCTTTGAGCA 59.931 47.619 2.04 0.00 44.75 4.26
487 501 1.412079 AATGTGGTGGCTTTGAGCAA 58.588 45.000 2.04 0.00 44.75 3.91
488 502 1.636148 ATGTGGTGGCTTTGAGCAAT 58.364 45.000 2.04 0.00 44.75 3.56
489 503 1.412079 TGTGGTGGCTTTGAGCAATT 58.588 45.000 2.04 0.00 44.75 2.32
490 504 1.761784 TGTGGTGGCTTTGAGCAATTT 59.238 42.857 2.04 0.00 44.75 1.82
491 505 2.961741 TGTGGTGGCTTTGAGCAATTTA 59.038 40.909 2.04 0.00 44.75 1.40
492 506 3.243704 TGTGGTGGCTTTGAGCAATTTAC 60.244 43.478 2.04 0.00 44.75 2.01
493 507 3.005791 GTGGTGGCTTTGAGCAATTTACT 59.994 43.478 2.04 0.00 44.75 2.24
494 508 3.255642 TGGTGGCTTTGAGCAATTTACTC 59.744 43.478 2.04 0.00 44.75 2.59
495 509 3.507622 GGTGGCTTTGAGCAATTTACTCT 59.492 43.478 2.04 0.00 44.75 3.24
496 510 4.700213 GGTGGCTTTGAGCAATTTACTCTA 59.300 41.667 2.04 0.00 44.75 2.43
497 511 5.358160 GGTGGCTTTGAGCAATTTACTCTAT 59.642 40.000 2.04 0.00 44.75 1.98
498 512 6.458888 GGTGGCTTTGAGCAATTTACTCTATC 60.459 42.308 2.04 0.00 44.75 2.08
499 513 6.317391 GTGGCTTTGAGCAATTTACTCTATCT 59.683 38.462 2.04 0.00 44.75 1.98
500 514 6.886459 TGGCTTTGAGCAATTTACTCTATCTT 59.114 34.615 2.04 0.00 44.75 2.40
501 515 7.066284 TGGCTTTGAGCAATTTACTCTATCTTC 59.934 37.037 2.04 0.00 44.75 2.87
502 516 7.413644 GCTTTGAGCAATTTACTCTATCTTCC 58.586 38.462 6.76 0.00 41.89 3.46
503 517 7.066284 GCTTTGAGCAATTTACTCTATCTTCCA 59.934 37.037 6.76 0.00 41.89 3.53
504 518 7.849804 TTGAGCAATTTACTCTATCTTCCAC 57.150 36.000 6.76 0.00 35.12 4.02
505 519 6.042777 TGAGCAATTTACTCTATCTTCCACG 58.957 40.000 6.76 0.00 35.12 4.94
506 520 6.127451 TGAGCAATTTACTCTATCTTCCACGA 60.127 38.462 6.76 0.00 35.12 4.35
507 521 6.043411 AGCAATTTACTCTATCTTCCACGAC 58.957 40.000 0.00 0.00 0.00 4.34
508 522 6.043411 GCAATTTACTCTATCTTCCACGACT 58.957 40.000 0.00 0.00 0.00 4.18
509 523 7.068348 AGCAATTTACTCTATCTTCCACGACTA 59.932 37.037 0.00 0.00 0.00 2.59
510 524 7.868415 GCAATTTACTCTATCTTCCACGACTAT 59.132 37.037 0.00 0.00 0.00 2.12
511 525 9.186323 CAATTTACTCTATCTTCCACGACTATG 57.814 37.037 0.00 0.00 0.00 2.23
512 526 8.693120 ATTTACTCTATCTTCCACGACTATGA 57.307 34.615 0.00 0.00 0.00 2.15
513 527 8.693120 TTTACTCTATCTTCCACGACTATGAT 57.307 34.615 0.00 0.00 0.00 2.45
514 528 9.788889 TTTACTCTATCTTCCACGACTATGATA 57.211 33.333 0.00 0.00 0.00 2.15
515 529 9.788889 TTACTCTATCTTCCACGACTATGATAA 57.211 33.333 0.00 0.00 0.00 1.75
516 530 8.871629 ACTCTATCTTCCACGACTATGATAAT 57.128 34.615 0.00 0.00 0.00 1.28
517 531 9.303116 ACTCTATCTTCCACGACTATGATAATT 57.697 33.333 0.00 0.00 0.00 1.40
520 534 9.360093 CTATCTTCCACGACTATGATAATTTCC 57.640 37.037 0.00 0.00 0.00 3.13
521 535 6.213677 TCTTCCACGACTATGATAATTTCCG 58.786 40.000 0.00 0.00 0.00 4.30
522 536 5.524971 TCCACGACTATGATAATTTCCGT 57.475 39.130 0.00 0.00 0.00 4.69
523 537 5.286438 TCCACGACTATGATAATTTCCGTG 58.714 41.667 0.00 0.00 43.67 4.94
524 538 5.047847 CCACGACTATGATAATTTCCGTGT 58.952 41.667 0.00 0.00 42.86 4.49
525 539 5.175126 CCACGACTATGATAATTTCCGTGTC 59.825 44.000 0.00 0.00 42.86 3.67
526 540 4.974275 ACGACTATGATAATTTCCGTGTCG 59.026 41.667 0.00 0.00 46.46 4.35
527 541 4.143597 CGACTATGATAATTTCCGTGTCGC 60.144 45.833 0.00 0.00 38.28 5.19
528 542 4.945246 ACTATGATAATTTCCGTGTCGCT 58.055 39.130 0.00 0.00 0.00 4.93
529 543 4.745125 ACTATGATAATTTCCGTGTCGCTG 59.255 41.667 0.00 0.00 0.00 5.18
530 544 3.239587 TGATAATTTCCGTGTCGCTGA 57.760 42.857 0.00 0.00 0.00 4.26
531 545 3.591023 TGATAATTTCCGTGTCGCTGAA 58.409 40.909 0.00 0.00 0.00 3.02
532 546 3.616821 TGATAATTTCCGTGTCGCTGAAG 59.383 43.478 0.00 0.00 0.00 3.02
533 547 0.517316 AATTTCCGTGTCGCTGAAGC 59.483 50.000 0.00 0.00 37.78 3.86
534 548 0.602638 ATTTCCGTGTCGCTGAAGCA 60.603 50.000 2.79 0.00 42.21 3.91
535 549 0.812014 TTTCCGTGTCGCTGAAGCAA 60.812 50.000 2.79 0.00 42.21 3.91
536 550 0.602638 TTCCGTGTCGCTGAAGCAAT 60.603 50.000 2.79 0.00 42.21 3.56
537 551 0.245266 TCCGTGTCGCTGAAGCAATA 59.755 50.000 2.79 0.00 42.21 1.90
538 552 1.134818 TCCGTGTCGCTGAAGCAATAT 60.135 47.619 2.79 0.00 42.21 1.28
539 553 1.258982 CCGTGTCGCTGAAGCAATATC 59.741 52.381 2.79 0.00 42.21 1.63
540 554 1.926510 CGTGTCGCTGAAGCAATATCA 59.073 47.619 2.79 0.00 42.21 2.15
541 555 2.541346 CGTGTCGCTGAAGCAATATCAT 59.459 45.455 2.79 0.00 42.21 2.45
542 556 3.362401 CGTGTCGCTGAAGCAATATCATC 60.362 47.826 2.79 0.00 42.21 2.92
543 557 3.557185 GTGTCGCTGAAGCAATATCATCA 59.443 43.478 2.79 0.00 42.21 3.07
544 558 4.034394 GTGTCGCTGAAGCAATATCATCAA 59.966 41.667 2.79 0.00 42.21 2.57
545 559 4.271776 TGTCGCTGAAGCAATATCATCAAG 59.728 41.667 2.79 0.00 42.21 3.02
546 560 4.272018 GTCGCTGAAGCAATATCATCAAGT 59.728 41.667 2.79 0.00 42.21 3.16
547 561 5.463392 GTCGCTGAAGCAATATCATCAAGTA 59.537 40.000 2.79 0.00 42.21 2.24
548 562 5.463392 TCGCTGAAGCAATATCATCAAGTAC 59.537 40.000 2.79 0.00 42.21 2.73
549 563 5.234972 CGCTGAAGCAATATCATCAAGTACA 59.765 40.000 2.79 0.00 42.21 2.90
550 564 6.073385 CGCTGAAGCAATATCATCAAGTACAT 60.073 38.462 2.79 0.00 42.21 2.29
551 565 7.296660 GCTGAAGCAATATCATCAAGTACATC 58.703 38.462 0.00 0.00 41.59 3.06
552 566 7.412137 TGAAGCAATATCATCAAGTACATCG 57.588 36.000 0.00 0.00 0.00 3.84
553 567 5.852738 AGCAATATCATCAAGTACATCGC 57.147 39.130 0.00 0.00 0.00 4.58
554 568 4.386954 AGCAATATCATCAAGTACATCGCG 59.613 41.667 0.00 0.00 0.00 5.87
555 569 4.434725 GCAATATCATCAAGTACATCGCGG 60.435 45.833 6.13 0.00 0.00 6.46
556 570 1.502231 ATCATCAAGTACATCGCGGC 58.498 50.000 6.13 0.00 0.00 6.53
557 571 0.869880 TCATCAAGTACATCGCGGCG 60.870 55.000 17.70 17.70 0.00 6.46
558 572 1.141019 ATCAAGTACATCGCGGCGT 59.859 52.632 22.90 6.40 0.00 5.68
559 573 1.145759 ATCAAGTACATCGCGGCGTG 61.146 55.000 22.90 20.32 0.00 5.34
560 574 2.092291 CAAGTACATCGCGGCGTGT 61.092 57.895 25.26 25.26 0.00 4.49
561 575 1.373748 AAGTACATCGCGGCGTGTT 60.374 52.632 26.42 9.52 0.00 3.32
562 576 0.947180 AAGTACATCGCGGCGTGTTT 60.947 50.000 26.42 17.11 0.00 2.83
563 577 1.225637 GTACATCGCGGCGTGTTTG 60.226 57.895 26.42 19.83 0.00 2.93
564 578 1.665282 TACATCGCGGCGTGTTTGT 60.665 52.632 26.42 25.63 0.00 2.83
595 609 5.178061 TCTTGTGAGATTTACATGCATCGT 58.822 37.500 0.00 1.32 0.00 3.73
606 620 1.062148 CATGCATCGTCTTGAGCACAG 59.938 52.381 0.00 0.00 40.14 3.66
622 636 1.467734 CACAGCAGGCATGAGAAACTC 59.532 52.381 0.62 0.00 0.00 3.01
646 660 2.633967 TGAGCCCATTGACATTTTGCTT 59.366 40.909 0.00 0.00 0.00 3.91
647 661 3.071312 TGAGCCCATTGACATTTTGCTTT 59.929 39.130 0.00 0.00 0.00 3.51
648 662 4.067192 GAGCCCATTGACATTTTGCTTTT 58.933 39.130 0.00 0.00 0.00 2.27
649 663 4.463070 AGCCCATTGACATTTTGCTTTTT 58.537 34.783 0.00 0.00 0.00 1.94
696 710 1.601419 CGGTAGCGAACCCTCCTTGA 61.601 60.000 9.07 0.00 46.62 3.02
707 721 0.622665 CCTCCTTGAGCCTTCCATGT 59.377 55.000 0.00 0.00 0.00 3.21
708 722 1.839994 CCTCCTTGAGCCTTCCATGTA 59.160 52.381 0.00 0.00 0.00 2.29
772 796 7.360575 TGGTTTTAGAGAGCGTTCTTATTTC 57.639 36.000 2.39 0.00 32.53 2.17
807 831 1.266718 CGACACCATGGTTCAGTTTGG 59.733 52.381 16.84 3.57 35.31 3.28
953 979 0.759346 AGAGTGTGGTGGGTTGTCTC 59.241 55.000 0.00 0.00 0.00 3.36
1128 1204 4.382320 GCCAAGGTCCGCCGTACA 62.382 66.667 0.00 0.00 40.50 2.90
1134 1210 2.266689 GTCCGCCGTACACCCATT 59.733 61.111 0.00 0.00 0.00 3.16
1155 1231 5.351233 TTCTTCTCGCTCTTCTCGATATC 57.649 43.478 0.00 0.00 35.25 1.63
1156 1232 4.637276 TCTTCTCGCTCTTCTCGATATCT 58.363 43.478 0.34 0.00 35.25 1.98
1158 1234 6.224584 TCTTCTCGCTCTTCTCGATATCTTA 58.775 40.000 0.34 0.00 35.25 2.10
1181 1263 1.344438 TGCTTTCTGACTCGACCATGT 59.656 47.619 0.00 0.00 0.00 3.21
1670 2906 2.507102 ATCGCAAGCTCGTCGGTG 60.507 61.111 0.00 0.00 37.18 4.94
1715 2951 0.250338 AGCTGTCCCGGTGAAGAAAC 60.250 55.000 0.00 0.00 0.00 2.78
1723 2959 2.263077 CCGGTGAAGAAACTCGATCAG 58.737 52.381 0.00 0.00 0.00 2.90
1856 3098 4.149221 CGGCTTTTCCAAATTTTACGGAAC 59.851 41.667 7.74 0.00 38.52 3.62
1886 3128 3.577649 TTTGAGGCAAACGTTTTGTGA 57.422 38.095 11.66 0.00 0.00 3.58
1889 3131 2.490115 TGAGGCAAACGTTTTGTGAACT 59.510 40.909 11.66 3.49 0.00 3.01
1936 3183 1.448985 AATTAGCCACGTCAACGCAT 58.551 45.000 1.81 0.00 44.43 4.73
1955 3203 7.745022 ACGCATGATTTTTCTGTGAAATATG 57.255 32.000 0.00 0.00 0.00 1.78
1966 3214 0.107410 TGAAATATGGGCGAGCCGTT 60.107 50.000 8.14 0.43 36.85 4.44
1999 3247 3.391382 CTGTCTCCCGTCACCCCC 61.391 72.222 0.00 0.00 0.00 5.40
2012 3260 4.324267 CGTCACCCCCTATCCATATTTTC 58.676 47.826 0.00 0.00 0.00 2.29
2019 3267 8.170061 CACCCCCTATCCATATTTTCTAAATGA 58.830 37.037 0.00 0.00 0.00 2.57
2069 3317 8.682128 CGTACCATTTTACGTAAACTACCTAA 57.318 34.615 19.97 4.61 40.01 2.69
2070 3318 8.583765 CGTACCATTTTACGTAAACTACCTAAC 58.416 37.037 19.97 11.24 40.01 2.34
2071 3319 9.418045 GTACCATTTTACGTAAACTACCTAACA 57.582 33.333 19.97 3.15 0.00 2.41
2073 3321 9.506018 ACCATTTTACGTAAACTACCTAACATT 57.494 29.630 19.97 0.00 0.00 2.71
2111 3359 6.762333 TCAACTACCTAACAACTAAACCTCC 58.238 40.000 0.00 0.00 0.00 4.30
2112 3360 5.752036 ACTACCTAACAACTAAACCTCCC 57.248 43.478 0.00 0.00 0.00 4.30
2155 3403 0.031010 AGGCCCGTCCTTCCTCTTAT 60.031 55.000 0.00 0.00 44.75 1.73
2160 3408 2.425102 CCCGTCCTTCCTCTTATCTCCT 60.425 54.545 0.00 0.00 0.00 3.69
2179 3427 5.723405 TCTCCTATCATATTCATCCACCTGG 59.277 44.000 0.00 0.00 0.00 4.45
2182 3430 6.013379 TCCTATCATATTCATCCACCTGGTTC 60.013 42.308 0.00 0.00 36.34 3.62
2187 3435 2.754946 TCATCCACCTGGTTCGTTAC 57.245 50.000 0.00 0.00 36.34 2.50
2307 3555 5.422145 AGCCAAGGCAATATCAATCAAAAC 58.578 37.500 14.40 0.00 44.88 2.43
2316 3564 7.410728 GGCAATATCAATCAAAACGTTTCACAG 60.411 37.037 15.01 5.29 0.00 3.66
2331 3579 0.320247 CACAGCTCTCTGCCGAAACT 60.320 55.000 0.00 0.00 44.10 2.66
2365 3613 7.339212 AGCTGCAATGGATTATTACAAGTTACA 59.661 33.333 1.02 0.00 0.00 2.41
2414 3662 3.096092 TCAACAGGAATACCATTTGGCC 58.904 45.455 0.00 0.00 39.32 5.36
2473 3721 2.029020 GGACCAAACAATCCCAAGAAGC 60.029 50.000 0.00 0.00 0.00 3.86
2478 3726 1.376649 ACAATCCCAAGAAGCTCCCT 58.623 50.000 0.00 0.00 0.00 4.20
2479 3727 1.005215 ACAATCCCAAGAAGCTCCCTG 59.995 52.381 0.00 0.00 0.00 4.45
2506 3754 5.727791 GCAACGATCAAGTAACCTTATGCAG 60.728 44.000 0.00 0.00 0.00 4.41
2507 3755 3.871594 ACGATCAAGTAACCTTATGCAGC 59.128 43.478 0.00 0.00 0.00 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 172 3.411114 ATCTCAGGTGCGGCCATGG 62.411 63.158 7.63 7.63 40.61 3.66
159 173 2.184830 CATCTCAGGTGCGGCCATG 61.185 63.158 2.24 0.00 40.61 3.66
160 174 2.191375 CATCTCAGGTGCGGCCAT 59.809 61.111 2.24 0.00 40.61 4.40
161 175 4.783621 GCATCTCAGGTGCGGCCA 62.784 66.667 2.24 0.00 40.61 5.36
162 176 4.783621 TGCATCTCAGGTGCGGCC 62.784 66.667 5.18 0.00 45.37 6.13
163 177 3.503363 GTGCATCTCAGGTGCGGC 61.503 66.667 5.18 0.00 45.37 6.53
164 178 2.821366 GGTGCATCTCAGGTGCGG 60.821 66.667 5.18 0.00 45.37 5.69
165 179 2.046988 TGGTGCATCTCAGGTGCG 60.047 61.111 5.18 0.00 45.37 5.34
166 180 2.042831 GGTGGTGCATCTCAGGTGC 61.043 63.158 1.68 1.68 42.81 5.01
167 181 1.742880 CGGTGGTGCATCTCAGGTG 60.743 63.158 0.00 0.00 0.00 4.00
168 182 2.665000 CGGTGGTGCATCTCAGGT 59.335 61.111 0.00 0.00 0.00 4.00
169 183 2.821366 GCGGTGGTGCATCTCAGG 60.821 66.667 0.00 0.00 34.15 3.86
170 184 2.046988 TGCGGTGGTGCATCTCAG 60.047 61.111 0.00 0.00 40.62 3.35
171 185 2.046988 CTGCGGTGGTGCATCTCA 60.047 61.111 0.00 0.00 45.26 3.27
172 186 3.503363 GCTGCGGTGGTGCATCTC 61.503 66.667 0.00 0.00 45.26 2.75
208 222 4.100084 TCAGGTGCGGCCATGGAG 62.100 66.667 18.40 9.81 40.61 3.86
209 223 4.100084 CTCAGGTGCGGCCATGGA 62.100 66.667 18.40 0.00 40.61 3.41
211 225 4.100084 TCCTCAGGTGCGGCCATG 62.100 66.667 2.24 0.00 40.61 3.66
212 226 3.790437 CTCCTCAGGTGCGGCCAT 61.790 66.667 2.24 0.00 40.61 4.40
215 229 4.459089 GTCCTCCTCAGGTGCGGC 62.459 72.222 0.00 0.00 41.28 6.53
216 230 4.135153 CGTCCTCCTCAGGTGCGG 62.135 72.222 0.00 0.00 41.28 5.69
217 231 4.135153 CCGTCCTCCTCAGGTGCG 62.135 72.222 0.00 0.00 41.28 5.34
218 232 3.775654 CCCGTCCTCCTCAGGTGC 61.776 72.222 0.00 0.00 41.28 5.01
219 233 3.077556 CCCCGTCCTCCTCAGGTG 61.078 72.222 0.00 0.00 41.28 4.00
220 234 2.807036 CTTCCCCGTCCTCCTCAGGT 62.807 65.000 0.00 0.00 41.28 4.00
221 235 2.038975 TTCCCCGTCCTCCTCAGG 59.961 66.667 0.00 0.00 42.01 3.86
222 236 2.060980 CCTTCCCCGTCCTCCTCAG 61.061 68.421 0.00 0.00 0.00 3.35
223 237 2.038975 CCTTCCCCGTCCTCCTCA 59.961 66.667 0.00 0.00 0.00 3.86
224 238 1.758906 CTCCTTCCCCGTCCTCCTC 60.759 68.421 0.00 0.00 0.00 3.71
225 239 1.812113 TTCTCCTTCCCCGTCCTCCT 61.812 60.000 0.00 0.00 0.00 3.69
226 240 1.305887 TTCTCCTTCCCCGTCCTCC 60.306 63.158 0.00 0.00 0.00 4.30
227 241 0.324460 TCTTCTCCTTCCCCGTCCTC 60.324 60.000 0.00 0.00 0.00 3.71
228 242 0.324830 CTCTTCTCCTTCCCCGTCCT 60.325 60.000 0.00 0.00 0.00 3.85
229 243 1.331399 CCTCTTCTCCTTCCCCGTCC 61.331 65.000 0.00 0.00 0.00 4.79
230 244 0.324460 TCCTCTTCTCCTTCCCCGTC 60.324 60.000 0.00 0.00 0.00 4.79
231 245 0.340208 ATCCTCTTCTCCTTCCCCGT 59.660 55.000 0.00 0.00 0.00 5.28
232 246 0.755686 CATCCTCTTCTCCTTCCCCG 59.244 60.000 0.00 0.00 0.00 5.73
233 247 1.135960 CCATCCTCTTCTCCTTCCCC 58.864 60.000 0.00 0.00 0.00 4.81
234 248 1.135960 CCCATCCTCTTCTCCTTCCC 58.864 60.000 0.00 0.00 0.00 3.97
235 249 1.135960 CCCCATCCTCTTCTCCTTCC 58.864 60.000 0.00 0.00 0.00 3.46
236 250 2.182516 TCCCCATCCTCTTCTCCTTC 57.817 55.000 0.00 0.00 0.00 3.46
237 251 2.046447 TCTTCCCCATCCTCTTCTCCTT 59.954 50.000 0.00 0.00 0.00 3.36
238 252 1.653918 TCTTCCCCATCCTCTTCTCCT 59.346 52.381 0.00 0.00 0.00 3.69
239 253 2.182516 TCTTCCCCATCCTCTTCTCC 57.817 55.000 0.00 0.00 0.00 3.71
240 254 3.379452 TCTTCTTCCCCATCCTCTTCTC 58.621 50.000 0.00 0.00 0.00 2.87
241 255 3.498614 TCTTCTTCCCCATCCTCTTCT 57.501 47.619 0.00 0.00 0.00 2.85
242 256 3.777522 TCTTCTTCTTCCCCATCCTCTTC 59.222 47.826 0.00 0.00 0.00 2.87
243 257 3.779738 CTCTTCTTCTTCCCCATCCTCTT 59.220 47.826 0.00 0.00 0.00 2.85
244 258 3.013417 TCTCTTCTTCTTCCCCATCCTCT 59.987 47.826 0.00 0.00 0.00 3.69
245 259 3.379452 TCTCTTCTTCTTCCCCATCCTC 58.621 50.000 0.00 0.00 0.00 3.71
246 260 3.383223 CTCTCTTCTTCTTCCCCATCCT 58.617 50.000 0.00 0.00 0.00 3.24
247 261 2.437651 CCTCTCTTCTTCTTCCCCATCC 59.562 54.545 0.00 0.00 0.00 3.51
248 262 2.437651 CCCTCTCTTCTTCTTCCCCATC 59.562 54.545 0.00 0.00 0.00 3.51
249 263 2.046447 TCCCTCTCTTCTTCTTCCCCAT 59.954 50.000 0.00 0.00 0.00 4.00
250 264 1.437149 TCCCTCTCTTCTTCTTCCCCA 59.563 52.381 0.00 0.00 0.00 4.96
251 265 2.255770 TCCCTCTCTTCTTCTTCCCC 57.744 55.000 0.00 0.00 0.00 4.81
252 266 4.566697 CCTTTTCCCTCTCTTCTTCTTCCC 60.567 50.000 0.00 0.00 0.00 3.97
253 267 4.287326 TCCTTTTCCCTCTCTTCTTCTTCC 59.713 45.833 0.00 0.00 0.00 3.46
254 268 5.487433 CTCCTTTTCCCTCTCTTCTTCTTC 58.513 45.833 0.00 0.00 0.00 2.87
255 269 4.288366 CCTCCTTTTCCCTCTCTTCTTCTT 59.712 45.833 0.00 0.00 0.00 2.52
256 270 3.843619 CCTCCTTTTCCCTCTCTTCTTCT 59.156 47.826 0.00 0.00 0.00 2.85
257 271 3.585289 ACCTCCTTTTCCCTCTCTTCTTC 59.415 47.826 0.00 0.00 0.00 2.87
258 272 3.329225 CACCTCCTTTTCCCTCTCTTCTT 59.671 47.826 0.00 0.00 0.00 2.52
259 273 2.909662 CACCTCCTTTTCCCTCTCTTCT 59.090 50.000 0.00 0.00 0.00 2.85
260 274 2.026729 CCACCTCCTTTTCCCTCTCTTC 60.027 54.545 0.00 0.00 0.00 2.87
261 275 1.988846 CCACCTCCTTTTCCCTCTCTT 59.011 52.381 0.00 0.00 0.00 2.85
262 276 1.662686 CCACCTCCTTTTCCCTCTCT 58.337 55.000 0.00 0.00 0.00 3.10
263 277 0.621082 CCCACCTCCTTTTCCCTCTC 59.379 60.000 0.00 0.00 0.00 3.20
264 278 0.103876 ACCCACCTCCTTTTCCCTCT 60.104 55.000 0.00 0.00 0.00 3.69
265 279 0.038310 CACCCACCTCCTTTTCCCTC 59.962 60.000 0.00 0.00 0.00 4.30
266 280 1.435346 CCACCCACCTCCTTTTCCCT 61.435 60.000 0.00 0.00 0.00 4.20
267 281 1.076727 CCACCCACCTCCTTTTCCC 59.923 63.158 0.00 0.00 0.00 3.97
268 282 0.704664 ATCCACCCACCTCCTTTTCC 59.295 55.000 0.00 0.00 0.00 3.13
269 283 1.354368 TCATCCACCCACCTCCTTTTC 59.646 52.381 0.00 0.00 0.00 2.29
270 284 1.075536 GTCATCCACCCACCTCCTTTT 59.924 52.381 0.00 0.00 0.00 2.27
271 285 0.698818 GTCATCCACCCACCTCCTTT 59.301 55.000 0.00 0.00 0.00 3.11
272 286 0.475632 TGTCATCCACCCACCTCCTT 60.476 55.000 0.00 0.00 0.00 3.36
273 287 0.253347 ATGTCATCCACCCACCTCCT 60.253 55.000 0.00 0.00 0.00 3.69
274 288 0.107017 CATGTCATCCACCCACCTCC 60.107 60.000 0.00 0.00 0.00 4.30
275 289 0.620556 ACATGTCATCCACCCACCTC 59.379 55.000 0.00 0.00 0.00 3.85
276 290 0.329261 CACATGTCATCCACCCACCT 59.671 55.000 0.00 0.00 0.00 4.00
277 291 0.680921 CCACATGTCATCCACCCACC 60.681 60.000 0.00 0.00 0.00 4.61
278 292 0.680921 CCCACATGTCATCCACCCAC 60.681 60.000 0.00 0.00 0.00 4.61
279 293 0.844221 TCCCACATGTCATCCACCCA 60.844 55.000 0.00 0.00 0.00 4.51
280 294 0.394352 GTCCCACATGTCATCCACCC 60.394 60.000 0.00 0.00 0.00 4.61
281 295 0.394352 GGTCCCACATGTCATCCACC 60.394 60.000 0.00 0.00 0.00 4.61
282 296 0.394352 GGGTCCCACATGTCATCCAC 60.394 60.000 1.78 0.00 0.00 4.02
283 297 0.844221 TGGGTCCCACATGTCATCCA 60.844 55.000 6.47 0.00 0.00 3.41
284 298 1.998530 TGGGTCCCACATGTCATCC 59.001 57.895 6.47 0.00 0.00 3.51
294 308 3.562232 GGTGGAACGTGGGTCCCA 61.562 66.667 6.47 6.47 38.12 4.37
295 309 3.246880 AGGTGGAACGTGGGTCCC 61.247 66.667 0.00 0.00 38.12 4.46
296 310 2.047213 TTGAGGTGGAACGTGGGTCC 62.047 60.000 0.00 0.00 38.12 4.46
297 311 0.883370 GTTGAGGTGGAACGTGGGTC 60.883 60.000 0.00 0.00 38.12 4.46
298 312 1.147600 GTTGAGGTGGAACGTGGGT 59.852 57.895 0.00 0.00 38.12 4.51
299 313 0.464735 TTGTTGAGGTGGAACGTGGG 60.465 55.000 0.00 0.00 38.12 4.61
300 314 1.333619 CTTTGTTGAGGTGGAACGTGG 59.666 52.381 0.00 0.00 38.12 4.94
301 315 2.014128 ACTTTGTTGAGGTGGAACGTG 58.986 47.619 0.00 0.00 38.12 4.49
302 316 2.014128 CACTTTGTTGAGGTGGAACGT 58.986 47.619 0.00 0.00 38.12 3.99
303 317 2.014128 ACACTTTGTTGAGGTGGAACG 58.986 47.619 0.00 0.00 38.12 3.95
304 318 3.942748 TGTACACTTTGTTGAGGTGGAAC 59.057 43.478 0.00 0.00 35.53 3.62
305 319 3.942748 GTGTACACTTTGTTGAGGTGGAA 59.057 43.478 18.92 0.00 35.53 3.53
306 320 3.055021 TGTGTACACTTTGTTGAGGTGGA 60.055 43.478 25.60 0.00 35.53 4.02
307 321 3.275143 TGTGTACACTTTGTTGAGGTGG 58.725 45.455 25.60 0.00 35.53 4.61
308 322 4.034048 GTCTGTGTACACTTTGTTGAGGTG 59.966 45.833 25.60 0.00 37.05 4.00
309 323 4.189231 GTCTGTGTACACTTTGTTGAGGT 58.811 43.478 25.60 0.00 0.00 3.85
310 324 4.188462 TGTCTGTGTACACTTTGTTGAGG 58.812 43.478 25.60 6.03 0.00 3.86
311 325 5.741425 CATGTCTGTGTACACTTTGTTGAG 58.259 41.667 25.60 13.28 30.75 3.02
312 326 4.035091 GCATGTCTGTGTACACTTTGTTGA 59.965 41.667 25.60 11.55 30.75 3.18
313 327 4.282068 GCATGTCTGTGTACACTTTGTTG 58.718 43.478 25.60 17.61 30.75 3.33
314 328 3.315191 GGCATGTCTGTGTACACTTTGTT 59.685 43.478 25.60 6.54 30.75 2.83
315 329 2.878406 GGCATGTCTGTGTACACTTTGT 59.122 45.455 25.60 6.61 30.75 2.83
316 330 2.877786 TGGCATGTCTGTGTACACTTTG 59.122 45.455 25.60 15.64 30.75 2.77
317 331 3.207265 TGGCATGTCTGTGTACACTTT 57.793 42.857 25.60 4.50 30.75 2.66
318 332 2.928801 TGGCATGTCTGTGTACACTT 57.071 45.000 25.60 4.17 30.75 3.16
319 333 2.038952 ACATGGCATGTCTGTGTACACT 59.961 45.455 26.78 3.12 39.92 3.55
320 334 2.426522 ACATGGCATGTCTGTGTACAC 58.573 47.619 26.78 19.36 39.92 2.90
321 335 2.813172 CAACATGGCATGTCTGTGTACA 59.187 45.455 31.47 0.00 44.07 2.90
322 336 2.162208 CCAACATGGCATGTCTGTGTAC 59.838 50.000 31.47 0.00 44.07 2.90
323 337 2.039613 TCCAACATGGCATGTCTGTGTA 59.960 45.455 31.47 12.30 44.07 2.90
324 338 1.202915 TCCAACATGGCATGTCTGTGT 60.203 47.619 31.47 14.41 44.07 3.72
325 339 1.200716 GTCCAACATGGCATGTCTGTG 59.799 52.381 31.47 24.66 44.07 3.66
326 340 1.538047 GTCCAACATGGCATGTCTGT 58.462 50.000 31.47 15.17 44.07 3.41
327 341 0.813184 GGTCCAACATGGCATGTCTG 59.187 55.000 31.47 26.84 44.07 3.51
328 342 0.677731 CGGTCCAACATGGCATGTCT 60.678 55.000 31.47 18.98 44.07 3.41
329 343 0.676466 TCGGTCCAACATGGCATGTC 60.676 55.000 31.47 19.18 44.07 3.06
331 345 0.959867 TGTCGGTCCAACATGGCATG 60.960 55.000 25.31 25.31 37.47 4.06
332 346 0.251121 TTGTCGGTCCAACATGGCAT 60.251 50.000 0.00 0.00 37.47 4.40
333 347 0.888736 CTTGTCGGTCCAACATGGCA 60.889 55.000 0.00 0.00 37.47 4.92
334 348 0.889186 ACTTGTCGGTCCAACATGGC 60.889 55.000 0.00 0.00 37.47 4.40
335 349 0.874390 CACTTGTCGGTCCAACATGG 59.126 55.000 0.00 0.00 39.43 3.66
336 350 0.874390 CCACTTGTCGGTCCAACATG 59.126 55.000 0.00 0.00 0.00 3.21
337 351 0.250727 CCCACTTGTCGGTCCAACAT 60.251 55.000 0.00 0.00 0.00 2.71
338 352 1.147376 CCCACTTGTCGGTCCAACA 59.853 57.895 0.00 0.00 0.00 3.33
339 353 0.883370 GACCCACTTGTCGGTCCAAC 60.883 60.000 6.32 0.00 42.39 3.77
340 354 1.448497 GACCCACTTGTCGGTCCAA 59.552 57.895 6.32 0.00 42.39 3.53
341 355 3.144285 GACCCACTTGTCGGTCCA 58.856 61.111 6.32 0.00 42.39 4.02
343 357 2.346365 GGGACCCACTTGTCGGTC 59.654 66.667 5.33 8.69 46.63 4.79
344 358 2.446994 TGGGACCCACTTGTCGGT 60.447 61.111 9.95 0.00 36.07 4.69
353 367 0.991355 AAACTGACTGGTGGGACCCA 60.991 55.000 9.95 9.95 37.50 4.51
354 368 0.185175 AAAACTGACTGGTGGGACCC 59.815 55.000 2.45 2.45 37.50 4.46
355 369 1.318576 CAAAACTGACTGGTGGGACC 58.681 55.000 0.00 0.00 39.22 4.46
356 370 0.668535 GCAAAACTGACTGGTGGGAC 59.331 55.000 0.00 0.00 0.00 4.46
357 371 0.550914 AGCAAAACTGACTGGTGGGA 59.449 50.000 0.00 0.00 0.00 4.37
358 372 3.116091 AGCAAAACTGACTGGTGGG 57.884 52.632 0.00 0.00 0.00 4.61
368 382 1.798813 GCTCGCACAAACAGCAAAACT 60.799 47.619 0.00 0.00 33.06 2.66
369 383 0.572125 GCTCGCACAAACAGCAAAAC 59.428 50.000 0.00 0.00 33.06 2.43
370 384 0.455410 AGCTCGCACAAACAGCAAAA 59.545 45.000 0.00 0.00 35.46 2.44
371 385 1.304254 TAGCTCGCACAAACAGCAAA 58.696 45.000 0.00 0.00 35.46 3.68
372 386 1.304254 TTAGCTCGCACAAACAGCAA 58.696 45.000 0.00 0.00 35.46 3.91
373 387 1.464608 GATTAGCTCGCACAAACAGCA 59.535 47.619 0.00 0.00 35.46 4.41
374 388 1.734465 AGATTAGCTCGCACAAACAGC 59.266 47.619 0.00 0.00 0.00 4.40
375 389 2.738846 ACAGATTAGCTCGCACAAACAG 59.261 45.455 0.00 0.00 0.00 3.16
376 390 2.480037 CACAGATTAGCTCGCACAAACA 59.520 45.455 0.00 0.00 0.00 2.83
377 391 2.736721 TCACAGATTAGCTCGCACAAAC 59.263 45.455 0.00 0.00 0.00 2.93
378 392 3.038788 TCACAGATTAGCTCGCACAAA 57.961 42.857 0.00 0.00 0.00 2.83
379 393 2.741759 TCACAGATTAGCTCGCACAA 57.258 45.000 0.00 0.00 0.00 3.33
380 394 2.741759 TTCACAGATTAGCTCGCACA 57.258 45.000 0.00 0.00 0.00 4.57
381 395 2.217393 CGATTCACAGATTAGCTCGCAC 59.783 50.000 0.00 0.00 0.00 5.34
382 396 2.463876 CGATTCACAGATTAGCTCGCA 58.536 47.619 0.00 0.00 0.00 5.10
383 397 1.789464 CCGATTCACAGATTAGCTCGC 59.211 52.381 0.00 0.00 0.00 5.03
384 398 2.791560 CACCGATTCACAGATTAGCTCG 59.208 50.000 0.00 0.00 0.00 5.03
385 399 3.553511 CACACCGATTCACAGATTAGCTC 59.446 47.826 0.00 0.00 0.00 4.09
386 400 3.195610 TCACACCGATTCACAGATTAGCT 59.804 43.478 0.00 0.00 0.00 3.32
387 401 3.521560 TCACACCGATTCACAGATTAGC 58.478 45.455 0.00 0.00 0.00 3.09
388 402 6.092670 ACAAATCACACCGATTCACAGATTAG 59.907 38.462 0.00 0.00 43.83 1.73
389 403 5.937540 ACAAATCACACCGATTCACAGATTA 59.062 36.000 0.00 0.00 43.83 1.75
390 404 4.761739 ACAAATCACACCGATTCACAGATT 59.238 37.500 0.00 0.00 43.83 2.40
391 405 4.326826 ACAAATCACACCGATTCACAGAT 58.673 39.130 0.00 0.00 43.83 2.90
392 406 3.738982 ACAAATCACACCGATTCACAGA 58.261 40.909 0.00 0.00 43.83 3.41
393 407 4.488126 AACAAATCACACCGATTCACAG 57.512 40.909 0.00 0.00 43.83 3.66
394 408 5.060506 AGTAACAAATCACACCGATTCACA 58.939 37.500 0.00 0.00 43.83 3.58
395 409 5.178623 TGAGTAACAAATCACACCGATTCAC 59.821 40.000 0.00 0.00 43.83 3.18
396 410 5.178623 GTGAGTAACAAATCACACCGATTCA 59.821 40.000 1.46 0.00 43.83 2.57
397 411 5.408604 AGTGAGTAACAAATCACACCGATTC 59.591 40.000 8.45 0.00 46.63 2.52
398 412 5.305585 AGTGAGTAACAAATCACACCGATT 58.694 37.500 8.45 0.00 46.63 3.34
399 413 4.894784 AGTGAGTAACAAATCACACCGAT 58.105 39.130 8.45 0.00 46.63 4.18
400 414 4.330944 AGTGAGTAACAAATCACACCGA 57.669 40.909 8.45 0.00 46.63 4.69
401 415 5.107220 GGTAAGTGAGTAACAAATCACACCG 60.107 44.000 8.45 0.00 46.63 4.94
402 416 5.995897 AGGTAAGTGAGTAACAAATCACACC 59.004 40.000 8.45 7.74 46.63 4.16
403 417 6.704493 TGAGGTAAGTGAGTAACAAATCACAC 59.296 38.462 8.45 0.00 46.63 3.82
404 418 6.822442 TGAGGTAAGTGAGTAACAAATCACA 58.178 36.000 8.45 0.00 46.63 3.58
405 419 7.152645 TCTGAGGTAAGTGAGTAACAAATCAC 58.847 38.462 0.00 0.00 44.97 3.06
406 420 7.015292 ACTCTGAGGTAAGTGAGTAACAAATCA 59.985 37.037 9.85 0.00 37.92 2.57
407 421 7.379750 ACTCTGAGGTAAGTGAGTAACAAATC 58.620 38.462 9.85 0.00 37.92 2.17
408 422 7.304497 ACTCTGAGGTAAGTGAGTAACAAAT 57.696 36.000 9.85 0.00 37.92 2.32
409 423 6.726490 ACTCTGAGGTAAGTGAGTAACAAA 57.274 37.500 9.85 0.00 37.92 2.83
410 424 6.462487 CCAACTCTGAGGTAAGTGAGTAACAA 60.462 42.308 9.85 0.00 38.63 2.83
411 425 5.010719 CCAACTCTGAGGTAAGTGAGTAACA 59.989 44.000 9.85 0.00 38.63 2.41
412 426 5.010820 ACCAACTCTGAGGTAAGTGAGTAAC 59.989 44.000 9.85 0.00 38.63 2.50
413 427 5.010719 CACCAACTCTGAGGTAAGTGAGTAA 59.989 44.000 16.17 0.00 38.63 2.24
414 428 4.523173 CACCAACTCTGAGGTAAGTGAGTA 59.477 45.833 16.17 0.00 38.63 2.59
415 429 3.322254 CACCAACTCTGAGGTAAGTGAGT 59.678 47.826 16.17 0.00 40.95 3.41
416 430 3.306364 CCACCAACTCTGAGGTAAGTGAG 60.306 52.174 20.66 10.80 36.07 3.51
417 431 2.632996 CCACCAACTCTGAGGTAAGTGA 59.367 50.000 20.66 0.00 36.07 3.41
418 432 2.368875 ACCACCAACTCTGAGGTAAGTG 59.631 50.000 14.85 14.85 36.07 3.16
419 433 2.690840 ACCACCAACTCTGAGGTAAGT 58.309 47.619 9.85 0.56 36.07 2.24
420 434 3.771577 AACCACCAACTCTGAGGTAAG 57.228 47.619 9.85 0.00 36.07 2.34
421 435 4.513406 AAAACCACCAACTCTGAGGTAA 57.487 40.909 9.85 0.00 36.07 2.85
422 436 4.513406 AAAAACCACCAACTCTGAGGTA 57.487 40.909 9.85 0.00 36.07 3.08
423 437 3.382083 AAAAACCACCAACTCTGAGGT 57.618 42.857 9.85 0.00 39.10 3.85
440 454 6.052360 GGCTAGGGTTCAAAAATCACAAAAA 58.948 36.000 0.00 0.00 0.00 1.94
441 455 5.129485 TGGCTAGGGTTCAAAAATCACAAAA 59.871 36.000 0.00 0.00 0.00 2.44
442 456 4.651503 TGGCTAGGGTTCAAAAATCACAAA 59.348 37.500 0.00 0.00 0.00 2.83
443 457 4.038642 GTGGCTAGGGTTCAAAAATCACAA 59.961 41.667 0.00 0.00 0.00 3.33
444 458 3.572255 GTGGCTAGGGTTCAAAAATCACA 59.428 43.478 0.00 0.00 0.00 3.58
445 459 3.572255 TGTGGCTAGGGTTCAAAAATCAC 59.428 43.478 0.00 0.00 0.00 3.06
446 460 3.838565 TGTGGCTAGGGTTCAAAAATCA 58.161 40.909 0.00 0.00 0.00 2.57
447 461 4.864704 TTGTGGCTAGGGTTCAAAAATC 57.135 40.909 0.00 0.00 0.00 2.17
448 462 5.071653 ACATTTGTGGCTAGGGTTCAAAAAT 59.928 36.000 0.00 0.00 32.99 1.82
449 463 4.407296 ACATTTGTGGCTAGGGTTCAAAAA 59.593 37.500 0.00 0.00 32.99 1.94
450 464 3.964031 ACATTTGTGGCTAGGGTTCAAAA 59.036 39.130 0.00 0.00 32.99 2.44
451 465 3.320541 CACATTTGTGGCTAGGGTTCAAA 59.679 43.478 2.69 0.00 42.10 2.69
452 466 2.890311 CACATTTGTGGCTAGGGTTCAA 59.110 45.455 2.69 0.00 42.10 2.69
453 467 2.513753 CACATTTGTGGCTAGGGTTCA 58.486 47.619 2.69 0.00 42.10 3.18
464 478 2.746269 CTCAAAGCCACCACATTTGTG 58.254 47.619 3.67 3.67 45.23 3.33
465 479 1.069049 GCTCAAAGCCACCACATTTGT 59.931 47.619 0.00 0.00 34.48 2.83
466 480 1.068895 TGCTCAAAGCCACCACATTTG 59.931 47.619 0.00 0.00 41.51 2.32
467 481 1.412079 TGCTCAAAGCCACCACATTT 58.588 45.000 0.00 0.00 41.51 2.32
468 482 1.412079 TTGCTCAAAGCCACCACATT 58.588 45.000 0.00 0.00 41.51 2.71
469 483 1.636148 ATTGCTCAAAGCCACCACAT 58.364 45.000 0.00 0.00 41.51 3.21
470 484 1.412079 AATTGCTCAAAGCCACCACA 58.588 45.000 0.00 0.00 41.51 4.17
471 485 2.531522 AAATTGCTCAAAGCCACCAC 57.468 45.000 0.00 0.00 41.51 4.16
472 486 3.230134 AGTAAATTGCTCAAAGCCACCA 58.770 40.909 0.00 0.00 41.51 4.17
473 487 3.507622 AGAGTAAATTGCTCAAAGCCACC 59.492 43.478 13.29 0.00 41.51 4.61
474 488 4.773323 AGAGTAAATTGCTCAAAGCCAC 57.227 40.909 13.29 0.00 41.51 5.01
475 489 6.418101 AGATAGAGTAAATTGCTCAAAGCCA 58.582 36.000 13.29 0.00 41.51 4.75
476 490 6.934048 AGATAGAGTAAATTGCTCAAAGCC 57.066 37.500 13.29 0.00 41.51 4.35
477 491 7.066284 TGGAAGATAGAGTAAATTGCTCAAAGC 59.934 37.037 13.29 4.12 42.82 3.51
478 492 8.394121 GTGGAAGATAGAGTAAATTGCTCAAAG 58.606 37.037 13.29 0.00 35.55 2.77
479 493 7.064609 CGTGGAAGATAGAGTAAATTGCTCAAA 59.935 37.037 13.29 1.72 35.55 2.69
480 494 6.535150 CGTGGAAGATAGAGTAAATTGCTCAA 59.465 38.462 13.29 0.00 35.55 3.02
481 495 6.042777 CGTGGAAGATAGAGTAAATTGCTCA 58.957 40.000 13.29 0.56 35.55 4.26
482 496 6.199342 GTCGTGGAAGATAGAGTAAATTGCTC 59.801 42.308 2.77 2.77 0.00 4.26
483 497 6.043411 GTCGTGGAAGATAGAGTAAATTGCT 58.957 40.000 0.00 0.00 0.00 3.91
484 498 6.043411 AGTCGTGGAAGATAGAGTAAATTGC 58.957 40.000 0.00 0.00 0.00 3.56
485 499 9.186323 CATAGTCGTGGAAGATAGAGTAAATTG 57.814 37.037 0.00 0.00 0.00 2.32
486 500 9.132923 TCATAGTCGTGGAAGATAGAGTAAATT 57.867 33.333 0.00 0.00 0.00 1.82
487 501 8.693120 TCATAGTCGTGGAAGATAGAGTAAAT 57.307 34.615 0.00 0.00 0.00 1.40
488 502 8.693120 ATCATAGTCGTGGAAGATAGAGTAAA 57.307 34.615 0.00 0.00 0.00 2.01
489 503 9.788889 TTATCATAGTCGTGGAAGATAGAGTAA 57.211 33.333 0.00 0.00 0.00 2.24
490 504 9.961264 ATTATCATAGTCGTGGAAGATAGAGTA 57.039 33.333 0.00 0.00 0.00 2.59
491 505 8.871629 ATTATCATAGTCGTGGAAGATAGAGT 57.128 34.615 0.00 0.00 0.00 3.24
494 508 9.360093 GGAAATTATCATAGTCGTGGAAGATAG 57.640 37.037 0.00 0.00 0.00 2.08
495 509 8.027189 CGGAAATTATCATAGTCGTGGAAGATA 58.973 37.037 0.00 0.00 0.00 1.98
496 510 6.868864 CGGAAATTATCATAGTCGTGGAAGAT 59.131 38.462 0.00 0.00 0.00 2.40
497 511 6.183360 ACGGAAATTATCATAGTCGTGGAAGA 60.183 38.462 0.00 0.00 0.00 2.87
498 512 5.983720 ACGGAAATTATCATAGTCGTGGAAG 59.016 40.000 0.00 0.00 0.00 3.46
499 513 5.751509 CACGGAAATTATCATAGTCGTGGAA 59.248 40.000 0.00 0.00 41.69 3.53
500 514 5.286438 CACGGAAATTATCATAGTCGTGGA 58.714 41.667 0.00 0.00 41.69 4.02
501 515 5.576337 CACGGAAATTATCATAGTCGTGG 57.424 43.478 0.00 0.00 41.69 4.94
503 517 4.974275 CGACACGGAAATTATCATAGTCGT 59.026 41.667 0.00 0.00 39.68 4.34
504 518 4.143597 GCGACACGGAAATTATCATAGTCG 60.144 45.833 0.00 0.00 43.51 4.18
505 519 4.982916 AGCGACACGGAAATTATCATAGTC 59.017 41.667 0.00 0.00 0.00 2.59
506 520 4.745125 CAGCGACACGGAAATTATCATAGT 59.255 41.667 0.00 0.00 0.00 2.12
507 521 4.982295 TCAGCGACACGGAAATTATCATAG 59.018 41.667 0.00 0.00 0.00 2.23
508 522 4.939271 TCAGCGACACGGAAATTATCATA 58.061 39.130 0.00 0.00 0.00 2.15
509 523 3.792401 TCAGCGACACGGAAATTATCAT 58.208 40.909 0.00 0.00 0.00 2.45
510 524 3.239587 TCAGCGACACGGAAATTATCA 57.760 42.857 0.00 0.00 0.00 2.15
511 525 3.544244 GCTTCAGCGACACGGAAATTATC 60.544 47.826 0.00 0.00 31.79 1.75
512 526 2.351726 GCTTCAGCGACACGGAAATTAT 59.648 45.455 0.00 0.00 31.79 1.28
513 527 1.730064 GCTTCAGCGACACGGAAATTA 59.270 47.619 0.00 0.00 31.79 1.40
514 528 0.517316 GCTTCAGCGACACGGAAATT 59.483 50.000 0.00 0.00 31.79 1.82
515 529 0.602638 TGCTTCAGCGACACGGAAAT 60.603 50.000 0.00 0.00 45.83 2.17
516 530 0.812014 TTGCTTCAGCGACACGGAAA 60.812 50.000 0.00 0.00 45.83 3.13
517 531 0.602638 ATTGCTTCAGCGACACGGAA 60.603 50.000 0.00 0.00 45.83 4.30
518 532 0.245266 TATTGCTTCAGCGACACGGA 59.755 50.000 0.00 0.00 45.83 4.69
519 533 1.258982 GATATTGCTTCAGCGACACGG 59.741 52.381 0.00 0.00 45.83 4.94
520 534 1.926510 TGATATTGCTTCAGCGACACG 59.073 47.619 0.00 0.00 45.83 4.49
521 535 3.557185 TGATGATATTGCTTCAGCGACAC 59.443 43.478 0.00 0.00 45.83 3.67
522 536 3.795877 TGATGATATTGCTTCAGCGACA 58.204 40.909 0.00 0.00 45.83 4.35
523 537 4.272018 ACTTGATGATATTGCTTCAGCGAC 59.728 41.667 0.00 0.00 45.83 5.19
524 538 4.445453 ACTTGATGATATTGCTTCAGCGA 58.555 39.130 0.00 0.00 45.83 4.93
525 539 4.808077 ACTTGATGATATTGCTTCAGCG 57.192 40.909 0.00 0.00 45.83 5.18
526 540 6.609237 TGTACTTGATGATATTGCTTCAGC 57.391 37.500 0.00 0.00 42.50 4.26
527 541 7.508134 CGATGTACTTGATGATATTGCTTCAG 58.492 38.462 0.00 0.00 0.00 3.02
528 542 6.073602 GCGATGTACTTGATGATATTGCTTCA 60.074 38.462 0.00 0.00 0.00 3.02
529 543 6.302615 GCGATGTACTTGATGATATTGCTTC 58.697 40.000 0.00 0.00 0.00 3.86
530 544 5.107337 CGCGATGTACTTGATGATATTGCTT 60.107 40.000 0.00 0.00 0.00 3.91
531 545 4.386954 CGCGATGTACTTGATGATATTGCT 59.613 41.667 0.00 0.00 0.00 3.91
532 546 4.434725 CCGCGATGTACTTGATGATATTGC 60.435 45.833 8.23 0.00 0.00 3.56
533 547 4.434725 GCCGCGATGTACTTGATGATATTG 60.435 45.833 8.23 0.00 0.00 1.90
534 548 3.679980 GCCGCGATGTACTTGATGATATT 59.320 43.478 8.23 0.00 0.00 1.28
535 549 3.254060 GCCGCGATGTACTTGATGATAT 58.746 45.455 8.23 0.00 0.00 1.63
536 550 2.672714 GCCGCGATGTACTTGATGATA 58.327 47.619 8.23 0.00 0.00 2.15
537 551 1.502231 GCCGCGATGTACTTGATGAT 58.498 50.000 8.23 0.00 0.00 2.45
538 552 0.869880 CGCCGCGATGTACTTGATGA 60.870 55.000 8.23 0.00 0.00 2.92
539 553 1.145759 ACGCCGCGATGTACTTGATG 61.146 55.000 21.79 0.00 0.00 3.07
540 554 1.141019 ACGCCGCGATGTACTTGAT 59.859 52.632 21.79 0.00 0.00 2.57
541 555 1.803922 CACGCCGCGATGTACTTGA 60.804 57.895 21.79 0.00 0.00 3.02
542 556 1.623081 AACACGCCGCGATGTACTTG 61.623 55.000 21.79 7.79 0.00 3.16
543 557 0.947180 AAACACGCCGCGATGTACTT 60.947 50.000 21.79 9.22 0.00 2.24
544 558 1.373748 AAACACGCCGCGATGTACT 60.374 52.632 21.79 8.18 0.00 2.73
545 559 1.225637 CAAACACGCCGCGATGTAC 60.226 57.895 21.79 0.00 0.00 2.90
546 560 1.665282 ACAAACACGCCGCGATGTA 60.665 52.632 21.79 0.00 0.00 2.29
547 561 2.970324 ACAAACACGCCGCGATGT 60.970 55.556 21.79 16.50 0.00 3.06
548 562 2.499520 CACAAACACGCCGCGATG 60.500 61.111 21.79 15.85 0.00 3.84
549 563 2.950172 GACACAAACACGCCGCGAT 61.950 57.895 21.79 3.89 0.00 4.58
550 564 3.632107 GACACAAACACGCCGCGA 61.632 61.111 21.79 0.00 0.00 5.87
551 565 4.986531 CGACACAAACACGCCGCG 62.987 66.667 12.14 12.14 0.00 6.46
552 566 2.438385 AATCGACACAAACACGCCGC 62.438 55.000 0.00 0.00 0.00 6.53
553 567 0.041663 AAATCGACACAAACACGCCG 60.042 50.000 0.00 0.00 0.00 6.46
554 568 1.263217 AGAAATCGACACAAACACGCC 59.737 47.619 0.00 0.00 0.00 5.68
555 569 2.663279 AGAAATCGACACAAACACGC 57.337 45.000 0.00 0.00 0.00 5.34
556 570 3.718864 CACAAGAAATCGACACAAACACG 59.281 43.478 0.00 0.00 0.00 4.49
557 571 4.904116 TCACAAGAAATCGACACAAACAC 58.096 39.130 0.00 0.00 0.00 3.32
558 572 4.873259 TCTCACAAGAAATCGACACAAACA 59.127 37.500 0.00 0.00 0.00 2.83
559 573 5.403897 TCTCACAAGAAATCGACACAAAC 57.596 39.130 0.00 0.00 0.00 2.93
560 574 6.618287 AATCTCACAAGAAATCGACACAAA 57.382 33.333 0.00 0.00 34.49 2.83
561 575 6.618287 AAATCTCACAAGAAATCGACACAA 57.382 33.333 0.00 0.00 34.49 3.33
562 576 6.704050 TGTAAATCTCACAAGAAATCGACACA 59.296 34.615 0.00 0.00 34.49 3.72
563 577 7.117241 TGTAAATCTCACAAGAAATCGACAC 57.883 36.000 0.00 0.00 34.49 3.67
564 578 7.624134 GCATGTAAATCTCACAAGAAATCGACA 60.624 37.037 0.00 0.00 34.49 4.35
595 609 0.958876 CATGCCTGCTGTGCTCAAGA 60.959 55.000 5.84 0.00 0.00 3.02
606 620 2.816087 TCAAAGAGTTTCTCATGCCTGC 59.184 45.455 0.00 0.00 32.06 4.85
622 636 3.434299 GCAAAATGTCAATGGGCTCAAAG 59.566 43.478 0.00 0.00 0.00 2.77
652 666 9.393249 CGTAGAAAGCAAAATGTCTCATTTAAA 57.607 29.630 7.91 0.00 0.00 1.52
653 667 8.020819 CCGTAGAAAGCAAAATGTCTCATTTAA 58.979 33.333 7.91 0.00 0.00 1.52
654 668 7.174253 ACCGTAGAAAGCAAAATGTCTCATTTA 59.826 33.333 7.91 0.00 0.00 1.40
655 669 6.016276 ACCGTAGAAAGCAAAATGTCTCATTT 60.016 34.615 2.42 2.42 0.00 2.32
656 670 5.473504 ACCGTAGAAAGCAAAATGTCTCATT 59.526 36.000 0.00 0.00 0.00 2.57
657 671 5.003804 ACCGTAGAAAGCAAAATGTCTCAT 58.996 37.500 0.00 0.00 0.00 2.90
658 672 4.385825 ACCGTAGAAAGCAAAATGTCTCA 58.614 39.130 0.00 0.00 0.00 3.27
659 673 5.446073 GCTACCGTAGAAAGCAAAATGTCTC 60.446 44.000 9.88 0.00 36.26 3.36
660 674 4.392138 GCTACCGTAGAAAGCAAAATGTCT 59.608 41.667 9.88 0.00 36.26 3.41
661 675 4.648970 GCTACCGTAGAAAGCAAAATGTC 58.351 43.478 9.88 0.00 36.26 3.06
662 676 3.124636 CGCTACCGTAGAAAGCAAAATGT 59.875 43.478 9.88 0.00 35.98 2.71
663 677 3.369756 TCGCTACCGTAGAAAGCAAAATG 59.630 43.478 9.88 0.00 35.98 2.32
664 678 3.592059 TCGCTACCGTAGAAAGCAAAAT 58.408 40.909 9.88 0.00 35.98 1.82
665 679 3.029320 TCGCTACCGTAGAAAGCAAAA 57.971 42.857 9.88 0.00 35.98 2.44
666 680 2.728690 TCGCTACCGTAGAAAGCAAA 57.271 45.000 9.88 0.00 35.98 3.68
667 681 2.331194 GTTCGCTACCGTAGAAAGCAA 58.669 47.619 9.88 0.00 35.98 3.91
668 682 1.403249 GGTTCGCTACCGTAGAAAGCA 60.403 52.381 9.88 0.00 37.12 3.91
669 683 1.275505 GGTTCGCTACCGTAGAAAGC 58.724 55.000 9.88 8.29 37.12 3.51
696 710 3.031736 ACGTCACTATACATGGAAGGCT 58.968 45.455 0.00 0.00 0.00 4.58
723 747 6.477033 AGCTAATATTGTGAAGCTACGTTGAG 59.523 38.462 8.41 0.00 43.29 3.02
725 749 6.414079 CAGCTAATATTGTGAAGCTACGTTG 58.586 40.000 9.58 0.00 43.26 4.10
772 796 3.181500 TGGTGTCGACATTGTAGATCGAG 60.181 47.826 23.12 0.00 44.89 4.04
807 831 8.080417 ACCAACATAGTGACGACATACATATAC 58.920 37.037 0.00 0.00 0.00 1.47
953 979 0.669077 CGTACCGGATGGAGAGAAGG 59.331 60.000 9.46 0.00 39.21 3.46
1125 1201 2.457598 AGAGCGAGAAGAATGGGTGTA 58.542 47.619 0.00 0.00 0.00 2.90
1128 1204 2.167487 GAGAAGAGCGAGAAGAATGGGT 59.833 50.000 0.00 0.00 0.00 4.51
1134 1210 4.637276 AGATATCGAGAAGAGCGAGAAGA 58.363 43.478 0.00 0.00 41.49 2.87
1155 1231 2.920490 GTCGAGTCAGAAAGCAGCTAAG 59.080 50.000 0.00 0.00 0.00 2.18
1156 1232 2.352814 GGTCGAGTCAGAAAGCAGCTAA 60.353 50.000 0.00 0.00 0.00 3.09
1158 1234 0.037790 GGTCGAGTCAGAAAGCAGCT 60.038 55.000 0.00 0.00 0.00 4.24
1181 1263 0.945743 GATGATCTGCACGCGCCATA 60.946 55.000 5.73 0.00 37.32 2.74
1320 1402 2.741092 GACTGGGCCTCGTTGACA 59.259 61.111 4.53 0.00 0.00 3.58
1670 2906 6.697395 ACTAATTTTTCCATAACAGCCAACC 58.303 36.000 0.00 0.00 0.00 3.77
1715 2951 0.102120 GACTCCACTGCCTGATCGAG 59.898 60.000 0.00 0.00 0.00 4.04
1723 2959 0.818296 ACGATACTGACTCCACTGCC 59.182 55.000 0.00 0.00 0.00 4.85
1823 3065 7.410120 AATTTGGAAAAGCCGAGATAGATTT 57.590 32.000 0.00 0.00 40.66 2.17
1856 3098 3.368495 GTTTGCCTCAAAAGTGTAACGG 58.632 45.455 0.00 0.00 45.86 4.44
1868 3110 2.490115 AGTTCACAAAACGTTTGCCTCA 59.510 40.909 15.46 0.00 0.00 3.86
1870 3112 4.911514 ATAGTTCACAAAACGTTTGCCT 57.088 36.364 15.46 6.90 0.00 4.75
1886 3128 3.502211 CCCAAGACTCGTGCAAAATAGTT 59.498 43.478 0.00 0.00 0.00 2.24
1889 3131 3.071479 GACCCAAGACTCGTGCAAAATA 58.929 45.455 0.00 0.00 0.00 1.40
1936 3183 5.417266 TCGCCCATATTTCACAGAAAAATCA 59.583 36.000 0.00 0.00 0.00 2.57
1966 3214 1.446099 CAGAGCTTAGGCGTTCGCA 60.446 57.895 18.46 0.00 44.37 5.10
1977 3225 1.536943 GGTGACGGGAGACAGAGCTT 61.537 60.000 0.00 0.00 34.72 3.74
1979 3227 2.574399 GGTGACGGGAGACAGAGC 59.426 66.667 0.00 0.00 34.72 4.09
2019 3267 8.085296 CGTAGCTCTTCATAGATGTAGGATTTT 58.915 37.037 0.00 0.00 0.00 1.82
2031 3279 7.113124 CGTAAAATGGTACGTAGCTCTTCATAG 59.887 40.741 23.89 7.39 41.51 2.23
2076 3324 8.553696 GTTGTTAGGTAGTTGATTCTCGAAAAA 58.446 33.333 0.00 0.00 0.00 1.94
2077 3325 7.929785 AGTTGTTAGGTAGTTGATTCTCGAAAA 59.070 33.333 0.00 0.00 0.00 2.29
2078 3326 7.439381 AGTTGTTAGGTAGTTGATTCTCGAAA 58.561 34.615 0.00 0.00 0.00 3.46
2079 3327 6.989659 AGTTGTTAGGTAGTTGATTCTCGAA 58.010 36.000 0.00 0.00 0.00 3.71
2080 3328 6.585695 AGTTGTTAGGTAGTTGATTCTCGA 57.414 37.500 0.00 0.00 0.00 4.04
2081 3329 8.645487 GTTTAGTTGTTAGGTAGTTGATTCTCG 58.355 37.037 0.00 0.00 0.00 4.04
2082 3330 8.933807 GGTTTAGTTGTTAGGTAGTTGATTCTC 58.066 37.037 0.00 0.00 0.00 2.87
2083 3331 8.657712 AGGTTTAGTTGTTAGGTAGTTGATTCT 58.342 33.333 0.00 0.00 0.00 2.40
2084 3332 8.843885 AGGTTTAGTTGTTAGGTAGTTGATTC 57.156 34.615 0.00 0.00 0.00 2.52
2085 3333 7.881751 GGAGGTTTAGTTGTTAGGTAGTTGATT 59.118 37.037 0.00 0.00 0.00 2.57
2086 3334 7.392418 GGAGGTTTAGTTGTTAGGTAGTTGAT 58.608 38.462 0.00 0.00 0.00 2.57
2087 3335 6.239686 GGGAGGTTTAGTTGTTAGGTAGTTGA 60.240 42.308 0.00 0.00 0.00 3.18
2088 3336 5.936372 GGGAGGTTTAGTTGTTAGGTAGTTG 59.064 44.000 0.00 0.00 0.00 3.16
2094 3342 3.361281 GGGGGAGGTTTAGTTGTTAGG 57.639 52.381 0.00 0.00 0.00 2.69
2111 3359 2.621556 TTGAAAATCAAGGGAGGGGG 57.378 50.000 0.00 0.00 31.83 5.40
2155 3403 5.723405 CCAGGTGGATGAATATGATAGGAGA 59.277 44.000 0.00 0.00 37.39 3.71
2160 3408 5.306937 ACGAACCAGGTGGATGAATATGATA 59.693 40.000 2.10 0.00 38.94 2.15
2307 3555 1.621301 CGGCAGAGAGCTGTGAAACG 61.621 60.000 0.00 0.00 44.86 3.60
2316 3564 2.656560 TTCTAGTTTCGGCAGAGAGC 57.343 50.000 0.00 0.00 44.65 4.09
2331 3579 9.273016 GTAATAATCCATTGCAGCTACTTTCTA 57.727 33.333 0.00 0.00 0.00 2.10
2365 3613 7.147479 TGCCTATCTATCTGGCTTTAAAACTCT 60.147 37.037 0.00 0.00 46.23 3.24
2399 3647 0.752658 GCTGGGCCAAATGGTATTCC 59.247 55.000 8.04 0.00 37.57 3.01
2414 3662 2.632377 TCGATAGGCTCTTTTTGCTGG 58.368 47.619 0.00 0.00 0.00 4.85
2478 3726 0.793861 GTTACTTGATCGTTGCCGCA 59.206 50.000 0.00 0.00 0.00 5.69
2479 3727 0.096454 GGTTACTTGATCGTTGCCGC 59.904 55.000 0.00 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.