Multiple sequence alignment - TraesCS6D01G156000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G156000 chr6D 100.000 3620 0 0 1 3620 132044609 132048228 0.000000e+00 6685.0
1 TraesCS6D01G156000 chr6B 94.234 2064 55 20 720 2730 229678266 229680318 0.000000e+00 3094.0
2 TraesCS6D01G156000 chr6B 89.776 714 60 8 1 711 229670955 229671658 0.000000e+00 902.0
3 TraesCS6D01G156000 chr6B 96.061 330 12 1 2787 3115 229680316 229680645 1.480000e-148 536.0
4 TraesCS6D01G156000 chr6B 89.671 213 13 2 3113 3317 229680944 229681155 2.770000e-66 263.0
5 TraesCS6D01G156000 chr6B 81.250 208 24 10 2834 3033 437480471 437480271 1.740000e-33 154.0
6 TraesCS6D01G156000 chr3B 83.159 671 99 13 47 710 618161257 618161920 5.170000e-168 601.0
7 TraesCS6D01G156000 chr3B 84.081 446 64 6 140 580 618161678 618162121 1.200000e-114 424.0
8 TraesCS6D01G156000 chr3D 82.852 589 83 10 119 700 526985731 526986308 2.490000e-141 512.0
9 TraesCS6D01G156000 chr5B 80.372 591 91 23 137 710 65521255 65520673 3.340000e-115 425.0
10 TraesCS6D01G156000 chr4A 80.308 584 96 18 139 710 38678201 38677625 1.200000e-114 424.0
11 TraesCS6D01G156000 chr1A 83.885 453 61 11 146 590 280491757 280491309 4.320000e-114 422.0
12 TraesCS6D01G156000 chr1A 78.767 584 108 16 140 710 57198977 57199557 9.490000e-101 377.0
13 TraesCS6D01G156000 chr3A 79.723 577 99 14 146 709 277541708 277541137 5.630000e-108 401.0
14 TraesCS6D01G156000 chr3A 82.524 103 11 6 609 710 695026874 695026970 2.320000e-12 84.2
15 TraesCS6D01G156000 chr5A 84.925 199 25 5 514 709 391979979 391979783 2.850000e-46 196.0
16 TraesCS6D01G156000 chr6A 77.035 344 56 18 2832 3167 396296734 396296406 3.710000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G156000 chr6D 132044609 132048228 3619 False 6685.000000 6685 100.000 1 3620 1 chr6D.!!$F1 3619
1 TraesCS6D01G156000 chr6B 229678266 229681155 2889 False 1297.666667 3094 93.322 720 3317 3 chr6B.!!$F2 2597
2 TraesCS6D01G156000 chr6B 229670955 229671658 703 False 902.000000 902 89.776 1 711 1 chr6B.!!$F1 710
3 TraesCS6D01G156000 chr3B 618161257 618162121 864 False 512.500000 601 83.620 47 710 2 chr3B.!!$F1 663
4 TraesCS6D01G156000 chr3D 526985731 526986308 577 False 512.000000 512 82.852 119 700 1 chr3D.!!$F1 581
5 TraesCS6D01G156000 chr5B 65520673 65521255 582 True 425.000000 425 80.372 137 710 1 chr5B.!!$R1 573
6 TraesCS6D01G156000 chr4A 38677625 38678201 576 True 424.000000 424 80.308 139 710 1 chr4A.!!$R1 571
7 TraesCS6D01G156000 chr1A 57198977 57199557 580 False 377.000000 377 78.767 140 710 1 chr1A.!!$F1 570
8 TraesCS6D01G156000 chr3A 277541137 277541708 571 True 401.000000 401 79.723 146 709 1 chr3A.!!$R1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
807 1012 0.389817 CTGCGAGATCGGTGTGGAAA 60.390 55.0 4.18 0.0 40.23 3.13 F
1757 1982 0.109132 GCACGATTTCTTGCCCAAGG 60.109 55.0 8.06 0.0 38.88 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2083 2314 0.321671 TCCAAGAAGCCAAGACTCGG 59.678 55.0 0.00 0.00 0.0 4.63 R
3512 4079 0.031994 GTGAACAGGCGCCAAACATT 59.968 50.0 31.54 14.72 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 5.179555 GCGAAGAGACCTTTAAAACATGACT 59.820 40.000 0.00 0.00 31.62 3.41
99 100 4.280929 ACCTTTAAAACATGACTGGCCTTC 59.719 41.667 3.32 0.29 0.00 3.46
103 104 3.947910 AAACATGACTGGCCTTCAATG 57.052 42.857 3.32 5.91 0.00 2.82
110 111 3.689161 TGACTGGCCTTCAATGTATTTCG 59.311 43.478 3.32 0.00 0.00 3.46
116 117 4.494199 GGCCTTCAATGTATTTCGAACGAG 60.494 45.833 0.00 0.00 0.00 4.18
120 121 7.622672 GCCTTCAATGTATTTCGAACGAGTTTA 60.623 37.037 0.00 0.00 0.00 2.01
214 222 8.132362 TCGCTGTTTTGAAATAAGTTGTTACAT 58.868 29.630 0.00 0.00 0.00 2.29
297 308 4.825085 GGACCCACATTTCACTTTTCACTA 59.175 41.667 0.00 0.00 0.00 2.74
457 474 7.061094 CACTTTCAGAACACACTTTTCACTTTC 59.939 37.037 0.00 0.00 0.00 2.62
479 504 3.118542 CACTGGCTTCTTTCACAAAAGC 58.881 45.455 0.00 0.00 41.44 3.51
716 921 7.791949 TGAAATAAATTGTTTCACAAATCGGC 58.208 30.769 12.75 0.00 41.96 5.54
717 922 6.720012 AATAAATTGTTTCACAAATCGGCC 57.280 33.333 0.00 0.00 41.96 6.13
718 923 2.346099 ATTGTTTCACAAATCGGCCG 57.654 45.000 22.12 22.12 41.96 6.13
722 927 1.784283 GTTTCACAAATCGGCCGTTTG 59.216 47.619 32.66 32.66 41.22 2.93
754 959 4.803426 GACCTCGCCAGCTCCACG 62.803 72.222 0.00 0.00 0.00 4.94
779 984 5.556915 TGGTGGTGTTCTAGGTAATCAAAG 58.443 41.667 0.00 0.00 0.00 2.77
807 1012 0.389817 CTGCGAGATCGGTGTGGAAA 60.390 55.000 4.18 0.00 40.23 3.13
846 1051 3.692101 TGGTTAGCGGTATTGGATTGTTG 59.308 43.478 0.00 0.00 0.00 3.33
883 1088 4.744795 TTAACCATGTTGCAAAAGTGGT 57.255 36.364 20.10 20.10 44.66 4.16
888 1108 3.260740 CATGTTGCAAAAGTGGTTGTGT 58.739 40.909 0.00 0.00 0.00 3.72
941 1161 6.439375 TGCATATATAGGTTCGTCCCTATGTT 59.561 38.462 19.40 12.28 45.42 2.71
948 1168 4.134563 GGTTCGTCCCTATGTTGCATATT 58.865 43.478 0.00 0.00 0.00 1.28
951 1171 5.749596 TCGTCCCTATGTTGCATATTTTG 57.250 39.130 0.00 0.00 0.00 2.44
1030 1250 0.671251 TCGATGTTTTGCACCAACCC 59.329 50.000 5.66 0.00 0.00 4.11
1063 1288 5.013861 TCAACGATAAACTTTCACTTCGC 57.986 39.130 0.00 0.00 0.00 4.70
1085 1310 4.075793 CTCCCTCGGTCCCTCCCA 62.076 72.222 0.00 0.00 0.00 4.37
1087 1312 3.083997 CCCTCGGTCCCTCCCAAG 61.084 72.222 0.00 0.00 0.00 3.61
1088 1313 2.284699 CCTCGGTCCCTCCCAAGT 60.285 66.667 0.00 0.00 0.00 3.16
1089 1314 2.359967 CCTCGGTCCCTCCCAAGTC 61.360 68.421 0.00 0.00 0.00 3.01
1090 1315 2.284405 TCGGTCCCTCCCAAGTCC 60.284 66.667 0.00 0.00 0.00 3.85
1091 1316 3.400054 CGGTCCCTCCCAAGTCCC 61.400 72.222 0.00 0.00 0.00 4.46
1092 1317 2.204090 GGTCCCTCCCAAGTCCCA 60.204 66.667 0.00 0.00 0.00 4.37
1093 1318 1.619669 GGTCCCTCCCAAGTCCCAT 60.620 63.158 0.00 0.00 0.00 4.00
1660 1885 2.124507 TAGTGGCTGGCCAGTCCAAC 62.125 60.000 35.62 27.87 46.01 3.77
1666 1891 3.499737 GGCCAGTCCAACATCGCG 61.500 66.667 0.00 0.00 34.01 5.87
1757 1982 0.109132 GCACGATTTCTTGCCCAAGG 60.109 55.000 8.06 0.00 38.88 3.61
1820 2051 1.255667 GGGCTTCTACGTCCTCACCA 61.256 60.000 0.00 0.00 0.00 4.17
1823 2054 1.978542 CTTCTACGTCCTCACCAACG 58.021 55.000 0.00 0.00 44.22 4.10
1850 2081 2.682136 TCCTGATGTTCCGGCCGA 60.682 61.111 30.73 10.38 0.00 5.54
2048 2279 1.599606 GCTCGTGCTGGAGGAGAAGA 61.600 60.000 20.70 0.00 38.64 2.87
2054 2285 1.753649 TGCTGGAGGAGAAGAAGATCG 59.246 52.381 0.00 0.00 0.00 3.69
2057 2288 2.017782 TGGAGGAGAAGAAGATCGTCG 58.982 52.381 2.87 0.00 32.45 5.12
2076 2307 3.998672 GGGAGCGGACCACAACGA 61.999 66.667 0.00 0.00 0.00 3.85
2156 2387 3.155167 GGATCTTCCTCGGGCGGT 61.155 66.667 0.00 0.00 32.53 5.68
2367 2598 0.609151 TCGCCGTGGATTTGGTTCTA 59.391 50.000 0.00 0.00 0.00 2.10
2379 2610 0.250858 TGGTTCTACCTGTCCGACGA 60.251 55.000 0.00 0.00 39.58 4.20
2555 2786 5.362430 TGCTTTGGTAAGGTCTCAAATGTTT 59.638 36.000 0.00 0.00 31.21 2.83
2580 2811 1.111277 TGATTCTTCATCCTCGCCGA 58.889 50.000 0.00 0.00 0.00 5.54
2597 2828 2.094545 GCCGAGGATTTGCTTCATTGTT 60.095 45.455 0.00 0.00 0.00 2.83
2598 2829 3.762779 CCGAGGATTTGCTTCATTGTTC 58.237 45.455 0.00 0.00 0.00 3.18
2612 2863 7.825761 TGCTTCATTGTTCTTCATCATAAGAGA 59.174 33.333 0.00 0.00 36.85 3.10
2657 2908 2.106511 AGTTCAGCTAATGGTGGTGTGT 59.893 45.455 0.00 0.00 41.59 3.72
2669 2926 2.616842 GGTGGTGTGTACTGAAACAAGG 59.383 50.000 0.00 0.00 0.00 3.61
2704 2961 8.097038 AGTTCAGTGCTCTCTGTTAATATTTGA 58.903 33.333 0.00 0.00 36.85 2.69
2724 2981 7.912056 TTTGAAGTTCAGATATGTTCCTGAG 57.088 36.000 5.56 0.00 40.13 3.35
2727 2984 3.776969 AGTTCAGATATGTTCCTGAGGCA 59.223 43.478 0.00 0.00 40.13 4.75
2728 2985 4.125703 GTTCAGATATGTTCCTGAGGCAG 58.874 47.826 0.00 0.00 40.13 4.85
2729 2986 2.103771 TCAGATATGTTCCTGAGGCAGC 59.896 50.000 0.00 0.00 34.78 5.25
2730 2987 2.121948 AGATATGTTCCTGAGGCAGCA 58.878 47.619 0.00 0.00 0.00 4.41
2731 2988 2.507058 AGATATGTTCCTGAGGCAGCAA 59.493 45.455 0.00 0.00 0.00 3.91
2732 2989 2.408271 TATGTTCCTGAGGCAGCAAG 57.592 50.000 0.00 0.00 0.00 4.01
2733 2990 0.694771 ATGTTCCTGAGGCAGCAAGA 59.305 50.000 0.00 0.00 0.00 3.02
2734 2991 0.694771 TGTTCCTGAGGCAGCAAGAT 59.305 50.000 0.00 0.00 0.00 2.40
2735 2992 1.074405 TGTTCCTGAGGCAGCAAGATT 59.926 47.619 0.00 0.00 0.00 2.40
2736 2993 1.471684 GTTCCTGAGGCAGCAAGATTG 59.528 52.381 0.00 0.00 0.00 2.67
2737 2994 0.986527 TCCTGAGGCAGCAAGATTGA 59.013 50.000 0.00 0.00 0.00 2.57
2738 2995 1.352017 TCCTGAGGCAGCAAGATTGAA 59.648 47.619 0.00 0.00 0.00 2.69
2739 2996 2.025605 TCCTGAGGCAGCAAGATTGAAT 60.026 45.455 0.00 0.00 0.00 2.57
2740 2997 2.099263 CCTGAGGCAGCAAGATTGAATG 59.901 50.000 0.00 0.00 0.00 2.67
2741 2998 3.014623 CTGAGGCAGCAAGATTGAATGA 58.985 45.455 0.00 0.00 0.00 2.57
2742 2999 3.628008 TGAGGCAGCAAGATTGAATGAT 58.372 40.909 0.00 0.00 0.00 2.45
2743 3000 3.380320 TGAGGCAGCAAGATTGAATGATG 59.620 43.478 0.00 0.00 36.10 3.07
2744 3001 3.628008 AGGCAGCAAGATTGAATGATGA 58.372 40.909 0.00 0.00 35.02 2.92
2745 3002 4.021229 AGGCAGCAAGATTGAATGATGAA 58.979 39.130 0.00 0.00 35.02 2.57
2746 3003 4.649674 AGGCAGCAAGATTGAATGATGAAT 59.350 37.500 0.00 0.00 35.02 2.57
2747 3004 4.982916 GGCAGCAAGATTGAATGATGAATC 59.017 41.667 0.00 0.00 35.02 2.52
2748 3005 5.221263 GGCAGCAAGATTGAATGATGAATCT 60.221 40.000 0.00 0.00 40.02 2.40
2749 3006 6.273825 GCAGCAAGATTGAATGATGAATCTT 58.726 36.000 0.00 0.00 45.59 2.40
2750 3007 6.757010 GCAGCAAGATTGAATGATGAATCTTT 59.243 34.615 9.01 0.00 43.34 2.52
2751 3008 7.254117 GCAGCAAGATTGAATGATGAATCTTTG 60.254 37.037 9.01 7.97 43.34 2.77
2752 3009 7.222805 CAGCAAGATTGAATGATGAATCTTTGG 59.777 37.037 9.01 3.23 43.34 3.28
2753 3010 7.039882 GCAAGATTGAATGATGAATCTTTGGT 58.960 34.615 9.01 0.00 43.34 3.67
2754 3011 8.192774 GCAAGATTGAATGATGAATCTTTGGTA 58.807 33.333 9.01 0.00 43.34 3.25
2760 3017 7.999679 TGAATGATGAATCTTTGGTAATGTCC 58.000 34.615 0.00 0.00 0.00 4.02
2761 3018 6.966534 ATGATGAATCTTTGGTAATGTCCC 57.033 37.500 0.00 0.00 0.00 4.46
2762 3019 5.825532 TGATGAATCTTTGGTAATGTCCCA 58.174 37.500 0.00 0.00 0.00 4.37
2763 3020 6.434302 TGATGAATCTTTGGTAATGTCCCAT 58.566 36.000 0.00 0.00 0.00 4.00
2764 3021 6.896860 TGATGAATCTTTGGTAATGTCCCATT 59.103 34.615 0.00 0.00 0.00 3.16
2765 3022 6.528537 TGAATCTTTGGTAATGTCCCATTG 57.471 37.500 0.00 0.00 0.00 2.82
2766 3023 6.252233 TGAATCTTTGGTAATGTCCCATTGA 58.748 36.000 0.00 0.00 0.00 2.57
2767 3024 6.896860 TGAATCTTTGGTAATGTCCCATTGAT 59.103 34.615 0.00 0.00 0.00 2.57
2768 3025 7.399765 TGAATCTTTGGTAATGTCCCATTGATT 59.600 33.333 0.00 0.00 37.17 2.57
2769 3026 6.528537 TCTTTGGTAATGTCCCATTGATTG 57.471 37.500 0.00 0.00 0.00 2.67
2770 3027 6.252233 TCTTTGGTAATGTCCCATTGATTGA 58.748 36.000 0.00 0.00 0.00 2.57
2771 3028 6.896860 TCTTTGGTAATGTCCCATTGATTGAT 59.103 34.615 0.00 0.00 0.00 2.57
2772 3029 8.058235 TCTTTGGTAATGTCCCATTGATTGATA 58.942 33.333 0.00 0.00 0.00 2.15
2773 3030 7.581213 TTGGTAATGTCCCATTGATTGATAC 57.419 36.000 0.00 0.00 0.00 2.24
2774 3031 6.068010 TGGTAATGTCCCATTGATTGATACC 58.932 40.000 0.00 0.00 0.00 2.73
2775 3032 6.126215 TGGTAATGTCCCATTGATTGATACCT 60.126 38.462 0.00 0.00 0.00 3.08
2776 3033 7.073088 TGGTAATGTCCCATTGATTGATACCTA 59.927 37.037 0.00 0.00 0.00 3.08
2777 3034 8.109634 GGTAATGTCCCATTGATTGATACCTAT 58.890 37.037 0.00 0.00 0.00 2.57
2778 3035 9.167311 GTAATGTCCCATTGATTGATACCTATC 57.833 37.037 0.00 0.00 0.00 2.08
2779 3036 7.579940 ATGTCCCATTGATTGATACCTATCT 57.420 36.000 0.00 0.00 33.88 1.98
2780 3037 7.009179 TGTCCCATTGATTGATACCTATCTC 57.991 40.000 0.00 0.00 33.88 2.75
2781 3038 6.789457 TGTCCCATTGATTGATACCTATCTCT 59.211 38.462 0.00 0.00 33.88 3.10
2782 3039 7.293299 TGTCCCATTGATTGATACCTATCTCTT 59.707 37.037 0.00 0.00 33.88 2.85
2783 3040 7.605691 GTCCCATTGATTGATACCTATCTCTTG 59.394 40.741 0.00 0.00 33.88 3.02
2784 3041 7.293299 TCCCATTGATTGATACCTATCTCTTGT 59.707 37.037 0.00 0.00 33.88 3.16
2785 3042 7.389884 CCCATTGATTGATACCTATCTCTTGTG 59.610 40.741 0.00 0.00 33.88 3.33
2850 3107 5.141910 TGTGGTGATGGCATGAATGAATAT 58.858 37.500 3.81 0.00 0.00 1.28
2891 3148 3.192001 CCATCATATCCTTTCCATTGGCG 59.808 47.826 0.00 0.00 0.00 5.69
2944 3201 0.185901 ACAAGTGCAATGGAGGGTGT 59.814 50.000 0.00 0.00 0.00 4.16
2984 3242 6.040247 TCAGCTAAATCTACACACATAACCG 58.960 40.000 0.00 0.00 0.00 4.44
3051 3309 0.586319 GCTGTAGTTCGTTTGCTGCA 59.414 50.000 0.00 0.00 0.00 4.41
3080 3338 5.224888 ACAATGCACTTGCTGAAAATACAG 58.775 37.500 2.33 0.00 42.66 2.74
3089 3347 6.490040 ACTTGCTGAAAATACAGTGTAACCAT 59.510 34.615 7.16 0.00 37.80 3.55
3140 3699 7.685481 TGTCAACTGGGAAATGAAGTAGAATA 58.315 34.615 0.00 0.00 0.00 1.75
3147 3706 6.183360 TGGGAAATGAAGTAGAATATCAGCGA 60.183 38.462 0.00 0.00 0.00 4.93
3171 3730 4.738998 CCATTCTGCGGCACCCCA 62.739 66.667 0.00 0.00 0.00 4.96
3212 3771 5.660417 ACATCATGTCATAGTTCTCTCACCT 59.340 40.000 0.00 0.00 0.00 4.00
3221 3780 1.133407 GTTCTCTCACCTAGCTGTCCG 59.867 57.143 0.00 0.00 0.00 4.79
3229 3788 1.544691 ACCTAGCTGTCCGTGTTACTG 59.455 52.381 0.00 0.00 0.00 2.74
3284 3851 4.519540 GCAAGATGCACCCTCTTAAAAA 57.480 40.909 0.83 0.00 44.26 1.94
3288 3855 6.573094 GCAAGATGCACCCTCTTAAAAAGAAT 60.573 38.462 0.83 0.00 44.26 2.40
3317 3884 5.268544 CAAGAAGCAACGGTATGAATCATG 58.731 41.667 5.91 0.00 0.00 3.07
3318 3885 3.313526 AGAAGCAACGGTATGAATCATGC 59.686 43.478 5.91 4.18 0.00 4.06
3319 3886 2.923121 AGCAACGGTATGAATCATGCT 58.077 42.857 10.94 6.15 37.80 3.79
3320 3887 2.874701 AGCAACGGTATGAATCATGCTC 59.125 45.455 10.94 1.36 38.16 4.26
3321 3888 2.348872 GCAACGGTATGAATCATGCTCG 60.349 50.000 10.94 13.80 0.00 5.03
3322 3889 2.866156 CAACGGTATGAATCATGCTCGT 59.134 45.455 16.77 16.77 36.03 4.18
3323 3890 2.473816 ACGGTATGAATCATGCTCGTG 58.526 47.619 19.82 8.55 34.51 4.35
3324 3891 1.193203 CGGTATGAATCATGCTCGTGC 59.807 52.381 10.94 1.71 40.20 5.34
3336 3903 3.965292 TGCTCGTGCATAGTACTCTAC 57.035 47.619 8.30 0.00 45.31 2.59
3337 3904 2.287103 TGCTCGTGCATAGTACTCTACG 59.713 50.000 8.30 6.72 45.31 3.51
3338 3905 2.287373 GCTCGTGCATAGTACTCTACGT 59.713 50.000 0.00 0.00 39.41 3.57
3339 3906 3.845303 GCTCGTGCATAGTACTCTACGTG 60.845 52.174 0.00 8.44 39.41 4.49
3340 3907 3.524541 TCGTGCATAGTACTCTACGTGA 58.475 45.455 0.00 0.00 0.00 4.35
3341 3908 3.308053 TCGTGCATAGTACTCTACGTGAC 59.692 47.826 0.00 0.00 0.00 3.67
3342 3909 3.545624 CGTGCATAGTACTCTACGTGACC 60.546 52.174 0.00 0.00 0.00 4.02
3343 3910 3.376234 GTGCATAGTACTCTACGTGACCA 59.624 47.826 0.00 0.00 0.00 4.02
3344 3911 4.011698 TGCATAGTACTCTACGTGACCAA 58.988 43.478 0.00 0.00 0.00 3.67
3345 3912 4.460034 TGCATAGTACTCTACGTGACCAAA 59.540 41.667 0.00 0.00 0.00 3.28
3346 3913 5.047872 TGCATAGTACTCTACGTGACCAAAA 60.048 40.000 0.00 0.00 0.00 2.44
3347 3914 5.515626 GCATAGTACTCTACGTGACCAAAAG 59.484 44.000 0.00 0.00 0.00 2.27
3348 3915 6.618811 CATAGTACTCTACGTGACCAAAAGT 58.381 40.000 0.00 0.00 0.00 2.66
3349 3916 7.627088 GCATAGTACTCTACGTGACCAAAAGTA 60.627 40.741 0.00 0.00 0.00 2.24
3350 3917 6.006759 AGTACTCTACGTGACCAAAAGTAC 57.993 41.667 0.00 5.70 38.44 2.73
3351 3918 4.924305 ACTCTACGTGACCAAAAGTACA 57.076 40.909 0.00 0.00 0.00 2.90
3352 3919 5.464030 ACTCTACGTGACCAAAAGTACAT 57.536 39.130 0.00 0.00 0.00 2.29
3353 3920 5.227908 ACTCTACGTGACCAAAAGTACATG 58.772 41.667 0.00 0.00 0.00 3.21
3354 3921 5.010314 ACTCTACGTGACCAAAAGTACATGA 59.990 40.000 0.00 0.00 0.00 3.07
3355 3922 6.032956 TCTACGTGACCAAAAGTACATGAT 57.967 37.500 0.00 0.00 0.00 2.45
3356 3923 6.460781 TCTACGTGACCAAAAGTACATGATT 58.539 36.000 0.00 0.00 0.00 2.57
3357 3924 5.607119 ACGTGACCAAAAGTACATGATTC 57.393 39.130 0.00 0.00 0.00 2.52
3358 3925 5.060506 ACGTGACCAAAAGTACATGATTCA 58.939 37.500 0.00 0.00 0.00 2.57
3359 3926 5.179368 ACGTGACCAAAAGTACATGATTCAG 59.821 40.000 0.00 0.00 0.00 3.02
3360 3927 5.393962 GTGACCAAAAGTACATGATTCAGC 58.606 41.667 0.00 0.00 0.00 4.26
3361 3928 5.048782 GTGACCAAAAGTACATGATTCAGCA 60.049 40.000 0.00 0.00 0.00 4.41
3362 3929 5.181811 TGACCAAAAGTACATGATTCAGCAG 59.818 40.000 0.00 0.00 0.00 4.24
3363 3930 4.460382 ACCAAAAGTACATGATTCAGCAGG 59.540 41.667 0.00 0.00 0.00 4.85
3364 3931 4.418392 CAAAAGTACATGATTCAGCAGGC 58.582 43.478 0.00 0.00 0.00 4.85
3365 3932 3.354948 AAGTACATGATTCAGCAGGCA 57.645 42.857 0.00 0.00 0.00 4.75
3366 3933 2.636830 AGTACATGATTCAGCAGGCAC 58.363 47.619 0.00 0.00 0.00 5.01
3367 3934 2.026915 AGTACATGATTCAGCAGGCACA 60.027 45.455 0.00 0.00 0.00 4.57
3368 3935 1.171308 ACATGATTCAGCAGGCACAC 58.829 50.000 0.00 0.00 0.00 3.82
3369 3936 1.271762 ACATGATTCAGCAGGCACACT 60.272 47.619 0.00 0.00 0.00 3.55
3370 3937 1.400846 CATGATTCAGCAGGCACACTC 59.599 52.381 0.00 0.00 0.00 3.51
3371 3938 0.671472 TGATTCAGCAGGCACACTCG 60.671 55.000 0.00 0.00 0.00 4.18
3372 3939 0.671781 GATTCAGCAGGCACACTCGT 60.672 55.000 0.00 0.00 0.00 4.18
3373 3940 0.608130 ATTCAGCAGGCACACTCGTA 59.392 50.000 0.00 0.00 0.00 3.43
3374 3941 0.608130 TTCAGCAGGCACACTCGTAT 59.392 50.000 0.00 0.00 0.00 3.06
3375 3942 0.173481 TCAGCAGGCACACTCGTATC 59.827 55.000 0.00 0.00 0.00 2.24
3376 3943 0.174389 CAGCAGGCACACTCGTATCT 59.826 55.000 0.00 0.00 0.00 1.98
3377 3944 0.457851 AGCAGGCACACTCGTATCTC 59.542 55.000 0.00 0.00 0.00 2.75
3378 3945 0.528684 GCAGGCACACTCGTATCTCC 60.529 60.000 0.00 0.00 0.00 3.71
3379 3946 1.107114 CAGGCACACTCGTATCTCCT 58.893 55.000 0.00 0.00 0.00 3.69
3380 3947 1.066303 CAGGCACACTCGTATCTCCTC 59.934 57.143 0.00 0.00 0.00 3.71
3381 3948 1.103803 GGCACACTCGTATCTCCTCA 58.896 55.000 0.00 0.00 0.00 3.86
3382 3949 1.683917 GGCACACTCGTATCTCCTCAT 59.316 52.381 0.00 0.00 0.00 2.90
3383 3950 2.544694 GGCACACTCGTATCTCCTCATG 60.545 54.545 0.00 0.00 0.00 3.07
3384 3951 2.736978 CACACTCGTATCTCCTCATGC 58.263 52.381 0.00 0.00 0.00 4.06
3385 3952 2.099756 CACACTCGTATCTCCTCATGCA 59.900 50.000 0.00 0.00 0.00 3.96
3386 3953 2.961741 ACACTCGTATCTCCTCATGCAT 59.038 45.455 0.00 0.00 0.00 3.96
3387 3954 3.005261 ACACTCGTATCTCCTCATGCATC 59.995 47.826 0.00 0.00 0.00 3.91
3388 3955 3.005155 CACTCGTATCTCCTCATGCATCA 59.995 47.826 0.00 0.00 0.00 3.07
3389 3956 3.831333 ACTCGTATCTCCTCATGCATCAT 59.169 43.478 0.00 0.00 0.00 2.45
3390 3957 5.012893 ACTCGTATCTCCTCATGCATCATA 58.987 41.667 0.00 0.00 0.00 2.15
3391 3958 5.655974 ACTCGTATCTCCTCATGCATCATAT 59.344 40.000 0.00 0.00 0.00 1.78
3392 3959 6.141560 TCGTATCTCCTCATGCATCATATC 57.858 41.667 0.00 0.00 0.00 1.63
3393 3960 4.974888 CGTATCTCCTCATGCATCATATCG 59.025 45.833 0.00 0.00 0.00 2.92
3394 3961 5.220931 CGTATCTCCTCATGCATCATATCGA 60.221 44.000 0.00 0.00 0.00 3.59
3395 3962 5.672421 ATCTCCTCATGCATCATATCGAA 57.328 39.130 0.00 0.00 0.00 3.71
3396 3963 5.069501 TCTCCTCATGCATCATATCGAAG 57.930 43.478 0.00 0.00 0.00 3.79
3397 3964 4.768968 TCTCCTCATGCATCATATCGAAGA 59.231 41.667 0.00 0.00 45.75 2.87
3398 3965 5.421374 TCTCCTCATGCATCATATCGAAGAT 59.579 40.000 0.00 0.00 45.12 2.40
3399 3966 5.416947 TCCTCATGCATCATATCGAAGATG 58.583 41.667 16.85 16.85 45.12 2.90
3400 3967 5.186409 TCCTCATGCATCATATCGAAGATGA 59.814 40.000 22.36 18.44 45.12 2.92
3401 3968 6.049790 CCTCATGCATCATATCGAAGATGAT 58.950 40.000 22.36 19.54 45.12 2.45
3402 3969 6.201234 CCTCATGCATCATATCGAAGATGATC 59.799 42.308 22.36 16.45 45.12 2.92
3403 3970 6.636705 TCATGCATCATATCGAAGATGATCA 58.363 36.000 22.36 19.72 45.12 2.92
3404 3971 6.534079 TCATGCATCATATCGAAGATGATCAC 59.466 38.462 22.36 16.88 45.12 3.06
3405 3972 5.786311 TGCATCATATCGAAGATGATCACA 58.214 37.500 22.36 18.52 45.12 3.58
3406 3973 5.636543 TGCATCATATCGAAGATGATCACAC 59.363 40.000 22.36 13.48 45.12 3.82
3407 3974 5.063186 GCATCATATCGAAGATGATCACACC 59.937 44.000 22.36 8.45 45.12 4.16
3408 3975 6.396450 CATCATATCGAAGATGATCACACCT 58.604 40.000 18.48 0.00 45.12 4.00
3409 3976 6.018589 TCATATCGAAGATGATCACACCTC 57.981 41.667 0.00 0.00 45.12 3.85
3410 3977 3.742433 ATCGAAGATGATCACACCTCC 57.258 47.619 0.00 0.00 45.12 4.30
3411 3978 2.739943 TCGAAGATGATCACACCTCCT 58.260 47.619 0.00 0.00 0.00 3.69
3412 3979 2.690497 TCGAAGATGATCACACCTCCTC 59.310 50.000 0.00 0.00 0.00 3.71
3413 3980 2.428530 CGAAGATGATCACACCTCCTCA 59.571 50.000 0.00 0.00 0.00 3.86
3414 3981 3.069300 CGAAGATGATCACACCTCCTCAT 59.931 47.826 0.00 0.00 0.00 2.90
3415 3982 4.630111 GAAGATGATCACACCTCCTCATC 58.370 47.826 0.00 3.74 42.70 2.92
3416 3983 2.971330 AGATGATCACACCTCCTCATCC 59.029 50.000 0.00 0.00 43.15 3.51
3417 3984 2.252535 TGATCACACCTCCTCATCCA 57.747 50.000 0.00 0.00 0.00 3.41
3418 3985 2.113807 TGATCACACCTCCTCATCCAG 58.886 52.381 0.00 0.00 0.00 3.86
3419 3986 2.114616 GATCACACCTCCTCATCCAGT 58.885 52.381 0.00 0.00 0.00 4.00
3420 3987 2.919772 TCACACCTCCTCATCCAGTA 57.080 50.000 0.00 0.00 0.00 2.74
3421 3988 2.739943 TCACACCTCCTCATCCAGTAG 58.260 52.381 0.00 0.00 0.00 2.57
3422 3989 2.311841 TCACACCTCCTCATCCAGTAGA 59.688 50.000 0.00 0.00 0.00 2.59
3423 3990 2.692557 CACACCTCCTCATCCAGTAGAG 59.307 54.545 0.00 0.00 0.00 2.43
3428 3995 1.323412 CCTCATCCAGTAGAGGGACG 58.677 60.000 0.00 0.00 46.11 4.79
3429 3996 1.410365 CCTCATCCAGTAGAGGGACGT 60.410 57.143 0.00 0.00 46.11 4.34
3430 3997 1.950909 CTCATCCAGTAGAGGGACGTC 59.049 57.143 7.13 7.13 37.23 4.34
3431 3998 0.663688 CATCCAGTAGAGGGACGTCG 59.336 60.000 9.92 0.00 37.23 5.12
3432 3999 0.545171 ATCCAGTAGAGGGACGTCGA 59.455 55.000 9.92 0.00 37.23 4.20
3433 4000 0.325933 TCCAGTAGAGGGACGTCGAA 59.674 55.000 9.92 0.00 0.00 3.71
3434 4001 0.450983 CCAGTAGAGGGACGTCGAAC 59.549 60.000 9.92 2.30 0.00 3.95
3435 4002 1.451067 CAGTAGAGGGACGTCGAACT 58.549 55.000 9.92 7.62 0.00 3.01
3436 4003 1.397692 CAGTAGAGGGACGTCGAACTC 59.602 57.143 19.64 19.64 0.00 3.01
3437 4004 0.731994 GTAGAGGGACGTCGAACTCC 59.268 60.000 22.08 13.05 0.00 3.85
3438 4005 0.617413 TAGAGGGACGTCGAACTCCT 59.383 55.000 22.08 16.89 0.00 3.69
3439 4006 0.961358 AGAGGGACGTCGAACTCCTG 60.961 60.000 22.08 0.00 0.00 3.86
3440 4007 2.126031 GGGACGTCGAACTCCTGC 60.126 66.667 9.92 0.00 0.00 4.85
3441 4008 2.649034 GGACGTCGAACTCCTGCA 59.351 61.111 9.92 0.00 0.00 4.41
3442 4009 1.444553 GGACGTCGAACTCCTGCAG 60.445 63.158 6.78 6.78 0.00 4.41
3443 4010 2.049063 ACGTCGAACTCCTGCAGC 60.049 61.111 8.66 0.00 0.00 5.25
3444 4011 2.259818 CGTCGAACTCCTGCAGCT 59.740 61.111 8.66 0.00 0.00 4.24
3445 4012 1.803519 CGTCGAACTCCTGCAGCTC 60.804 63.158 8.66 0.72 0.00 4.09
3446 4013 1.446966 GTCGAACTCCTGCAGCTCC 60.447 63.158 8.66 0.00 0.00 4.70
3447 4014 2.507992 CGAACTCCTGCAGCTCCG 60.508 66.667 8.66 3.07 0.00 4.63
3448 4015 2.125350 GAACTCCTGCAGCTCCGG 60.125 66.667 8.66 0.00 0.00 5.14
3449 4016 4.400961 AACTCCTGCAGCTCCGGC 62.401 66.667 8.66 0.00 39.06 6.13
3457 4024 3.842923 CAGCTCCGGCCACTCGAT 61.843 66.667 2.24 0.00 39.73 3.59
3458 4025 3.842923 AGCTCCGGCCACTCGATG 61.843 66.667 2.24 0.00 39.73 3.84
3459 4026 3.838271 GCTCCGGCCACTCGATGA 61.838 66.667 2.24 0.00 0.00 2.92
3460 4027 3.133014 CTCCGGCCACTCGATGAT 58.867 61.111 2.24 0.00 0.00 2.45
3461 4028 1.300465 CTCCGGCCACTCGATGATG 60.300 63.158 2.24 0.00 0.00 3.07
3462 4029 2.021068 CTCCGGCCACTCGATGATGT 62.021 60.000 2.24 0.00 0.00 3.06
3463 4030 0.753848 TCCGGCCACTCGATGATGTA 60.754 55.000 2.24 0.00 0.00 2.29
3464 4031 0.319040 CCGGCCACTCGATGATGTAG 60.319 60.000 2.24 0.00 0.00 2.74
3465 4032 0.941463 CGGCCACTCGATGATGTAGC 60.941 60.000 2.24 0.00 0.00 3.58
3466 4033 0.104855 GGCCACTCGATGATGTAGCA 59.895 55.000 0.00 0.00 0.00 3.49
3467 4034 1.473257 GGCCACTCGATGATGTAGCAA 60.473 52.381 0.00 0.00 0.00 3.91
3468 4035 1.863454 GCCACTCGATGATGTAGCAAG 59.137 52.381 0.00 0.00 0.00 4.01
3469 4036 2.481969 GCCACTCGATGATGTAGCAAGA 60.482 50.000 0.00 0.00 0.00 3.02
3470 4037 3.785486 CCACTCGATGATGTAGCAAGAA 58.215 45.455 0.00 0.00 0.00 2.52
3471 4038 4.183865 CCACTCGATGATGTAGCAAGAAA 58.816 43.478 0.00 0.00 0.00 2.52
3472 4039 4.033358 CCACTCGATGATGTAGCAAGAAAC 59.967 45.833 0.00 0.00 0.00 2.78
3473 4040 4.627035 CACTCGATGATGTAGCAAGAAACA 59.373 41.667 0.00 0.00 0.00 2.83
3474 4041 5.292834 CACTCGATGATGTAGCAAGAAACAT 59.707 40.000 0.00 0.00 39.00 2.71
3475 4042 5.292834 ACTCGATGATGTAGCAAGAAACATG 59.707 40.000 0.00 0.00 36.48 3.21
3476 4043 5.178061 TCGATGATGTAGCAAGAAACATGT 58.822 37.500 0.00 0.00 36.48 3.21
3477 4044 6.337356 TCGATGATGTAGCAAGAAACATGTA 58.663 36.000 0.00 0.00 36.48 2.29
3478 4045 6.476706 TCGATGATGTAGCAAGAAACATGTAG 59.523 38.462 0.00 0.00 36.48 2.74
3479 4046 5.801350 TGATGTAGCAAGAAACATGTAGC 57.199 39.130 0.00 0.00 36.48 3.58
3480 4047 5.244755 TGATGTAGCAAGAAACATGTAGCA 58.755 37.500 0.00 0.00 36.48 3.49
3481 4048 5.352293 TGATGTAGCAAGAAACATGTAGCAG 59.648 40.000 0.00 0.00 36.48 4.24
3482 4049 4.893608 TGTAGCAAGAAACATGTAGCAGA 58.106 39.130 0.00 0.00 0.00 4.26
3483 4050 5.304778 TGTAGCAAGAAACATGTAGCAGAA 58.695 37.500 0.00 0.00 0.00 3.02
3484 4051 5.939883 TGTAGCAAGAAACATGTAGCAGAAT 59.060 36.000 0.00 0.00 0.00 2.40
3485 4052 5.557891 AGCAAGAAACATGTAGCAGAATC 57.442 39.130 0.00 0.00 0.00 2.52
3486 4053 5.251764 AGCAAGAAACATGTAGCAGAATCT 58.748 37.500 0.00 0.00 0.00 2.40
3487 4054 5.123502 AGCAAGAAACATGTAGCAGAATCTG 59.876 40.000 5.78 5.78 34.12 2.90
3488 4055 5.675575 GCAAGAAACATGTAGCAGAATCTGG 60.676 44.000 12.66 0.00 31.21 3.86
3489 4056 5.426689 AGAAACATGTAGCAGAATCTGGA 57.573 39.130 12.66 0.00 31.21 3.86
3490 4057 5.999044 AGAAACATGTAGCAGAATCTGGAT 58.001 37.500 12.66 0.00 31.21 3.41
3491 4058 6.054295 AGAAACATGTAGCAGAATCTGGATC 58.946 40.000 12.66 0.00 31.21 3.36
3492 4059 5.363562 AACATGTAGCAGAATCTGGATCA 57.636 39.130 12.66 0.00 31.21 2.92
3493 4060 4.701765 ACATGTAGCAGAATCTGGATCAC 58.298 43.478 12.66 0.00 31.21 3.06
3494 4061 4.162888 ACATGTAGCAGAATCTGGATCACA 59.837 41.667 12.66 3.91 31.21 3.58
3503 4070 2.746997 CTGGATCACAGCACTGACG 58.253 57.895 4.31 0.00 40.97 4.35
3504 4071 0.244721 CTGGATCACAGCACTGACGA 59.755 55.000 4.31 1.00 40.97 4.20
3505 4072 0.038251 TGGATCACAGCACTGACGAC 60.038 55.000 4.31 0.00 0.00 4.34
3506 4073 1.073216 GGATCACAGCACTGACGACG 61.073 60.000 4.31 0.00 0.00 5.12
3507 4074 1.073216 GATCACAGCACTGACGACGG 61.073 60.000 4.31 0.00 0.00 4.79
3508 4075 3.406361 CACAGCACTGACGACGGC 61.406 66.667 4.31 0.00 0.00 5.68
3509 4076 3.911698 ACAGCACTGACGACGGCA 61.912 61.111 2.00 2.00 0.00 5.69
3510 4077 3.108289 CAGCACTGACGACGGCAG 61.108 66.667 28.87 28.87 39.26 4.85
3511 4078 3.606662 AGCACTGACGACGGCAGT 61.607 61.111 30.41 30.41 46.86 4.40
3512 4079 2.257371 GCACTGACGACGGCAGTA 59.743 61.111 34.50 0.00 44.28 2.74
3513 4080 1.372499 GCACTGACGACGGCAGTAA 60.372 57.895 34.50 0.00 44.28 2.24
3514 4081 0.736325 GCACTGACGACGGCAGTAAT 60.736 55.000 34.50 11.51 44.28 1.89
3515 4082 0.992072 CACTGACGACGGCAGTAATG 59.008 55.000 34.50 19.72 44.28 1.90
3516 4083 0.601558 ACTGACGACGGCAGTAATGT 59.398 50.000 34.24 10.91 44.27 2.71
3517 4084 1.000506 ACTGACGACGGCAGTAATGTT 59.999 47.619 34.24 9.17 44.27 2.71
3518 4085 2.066262 CTGACGACGGCAGTAATGTTT 58.934 47.619 22.89 0.00 0.00 2.83
3519 4086 1.795872 TGACGACGGCAGTAATGTTTG 59.204 47.619 0.00 0.00 0.00 2.93
3520 4087 1.127951 GACGACGGCAGTAATGTTTGG 59.872 52.381 0.00 0.00 0.00 3.28
3521 4088 0.179200 CGACGGCAGTAATGTTTGGC 60.179 55.000 0.00 0.00 36.60 4.52
3523 4090 4.476361 GGCAGTAATGTTTGGCGC 57.524 55.556 0.00 0.00 0.00 6.53
3524 4091 1.153842 GGCAGTAATGTTTGGCGCC 60.154 57.895 22.73 22.73 0.00 6.53
3525 4092 1.595093 GGCAGTAATGTTTGGCGCCT 61.595 55.000 29.70 8.67 35.17 5.52
3526 4093 0.456653 GCAGTAATGTTTGGCGCCTG 60.457 55.000 29.70 15.15 0.00 4.85
3527 4094 0.881118 CAGTAATGTTTGGCGCCTGT 59.119 50.000 29.70 8.59 0.00 4.00
3528 4095 1.269448 CAGTAATGTTTGGCGCCTGTT 59.731 47.619 29.70 16.36 0.00 3.16
3529 4096 1.539827 AGTAATGTTTGGCGCCTGTTC 59.460 47.619 29.70 15.44 0.00 3.18
3530 4097 1.268352 GTAATGTTTGGCGCCTGTTCA 59.732 47.619 29.70 20.42 0.00 3.18
3531 4098 0.031994 AATGTTTGGCGCCTGTTCAC 59.968 50.000 29.70 16.41 0.00 3.18
3532 4099 1.106351 ATGTTTGGCGCCTGTTCACA 61.106 50.000 29.70 21.27 0.00 3.58
3533 4100 1.008538 GTTTGGCGCCTGTTCACAG 60.009 57.895 29.70 0.00 43.40 3.66
3551 4118 8.197988 GTTCACAGGAACCAACATTAGTATAG 57.802 38.462 0.00 0.00 46.18 1.31
3552 4119 7.727578 TCACAGGAACCAACATTAGTATAGA 57.272 36.000 0.00 0.00 0.00 1.98
3553 4120 7.553334 TCACAGGAACCAACATTAGTATAGAC 58.447 38.462 0.00 0.00 0.00 2.59
3554 4121 7.399191 TCACAGGAACCAACATTAGTATAGACT 59.601 37.037 0.00 0.00 39.92 3.24
3555 4122 7.492669 CACAGGAACCAACATTAGTATAGACTG 59.507 40.741 0.00 0.00 36.28 3.51
3556 4123 6.480320 CAGGAACCAACATTAGTATAGACTGC 59.520 42.308 0.00 0.00 36.28 4.40
3557 4124 6.384305 AGGAACCAACATTAGTATAGACTGCT 59.616 38.462 0.00 0.00 36.28 4.24
3558 4125 6.480320 GGAACCAACATTAGTATAGACTGCTG 59.520 42.308 0.00 0.15 36.28 4.41
3559 4126 6.546428 ACCAACATTAGTATAGACTGCTGT 57.454 37.500 0.00 0.00 36.28 4.40
3560 4127 7.655521 ACCAACATTAGTATAGACTGCTGTA 57.344 36.000 0.00 0.00 36.28 2.74
3561 4128 8.251383 ACCAACATTAGTATAGACTGCTGTAT 57.749 34.615 0.00 0.00 36.28 2.29
3562 4129 8.705594 ACCAACATTAGTATAGACTGCTGTATT 58.294 33.333 0.00 0.00 36.28 1.89
3563 4130 9.547753 CCAACATTAGTATAGACTGCTGTATTT 57.452 33.333 0.00 0.00 36.28 1.40
3571 4138 8.918116 AGTATAGACTGCTGTATTTTGAGATCA 58.082 33.333 0.00 0.00 33.41 2.92
3572 4139 8.973378 GTATAGACTGCTGTATTTTGAGATCAC 58.027 37.037 0.00 0.00 0.00 3.06
3573 4140 5.798132 AGACTGCTGTATTTTGAGATCACA 58.202 37.500 0.00 0.00 0.00 3.58
3574 4141 5.641209 AGACTGCTGTATTTTGAGATCACAC 59.359 40.000 0.00 0.00 0.00 3.82
3575 4142 5.308014 ACTGCTGTATTTTGAGATCACACA 58.692 37.500 0.00 0.00 0.00 3.72
3576 4143 5.180117 ACTGCTGTATTTTGAGATCACACAC 59.820 40.000 0.00 0.00 0.00 3.82
3577 4144 5.062528 TGCTGTATTTTGAGATCACACACA 58.937 37.500 0.00 0.00 0.00 3.72
3578 4145 5.706833 TGCTGTATTTTGAGATCACACACAT 59.293 36.000 0.00 0.00 0.00 3.21
3579 4146 6.878389 TGCTGTATTTTGAGATCACACACATA 59.122 34.615 0.00 0.00 0.00 2.29
3580 4147 7.553760 TGCTGTATTTTGAGATCACACACATAT 59.446 33.333 0.00 0.00 0.00 1.78
3581 4148 8.066595 GCTGTATTTTGAGATCACACACATATC 58.933 37.037 0.00 0.00 0.00 1.63
3582 4149 9.322773 CTGTATTTTGAGATCACACACATATCT 57.677 33.333 0.00 0.00 32.70 1.98
3583 4150 9.101655 TGTATTTTGAGATCACACACATATCTG 57.898 33.333 0.00 0.00 30.19 2.90
3584 4151 6.426980 TTTTGAGATCACACACATATCTGC 57.573 37.500 0.00 0.00 30.19 4.26
3585 4152 4.741321 TGAGATCACACACATATCTGCA 57.259 40.909 0.00 0.00 30.19 4.41
3586 4153 4.690122 TGAGATCACACACATATCTGCAG 58.310 43.478 7.63 7.63 30.19 4.41
3587 4154 4.403432 TGAGATCACACACATATCTGCAGA 59.597 41.667 20.79 20.79 30.19 4.26
3588 4155 5.105228 TGAGATCACACACATATCTGCAGAA 60.105 40.000 22.50 10.69 30.19 3.02
3589 4156 5.737860 AGATCACACACATATCTGCAGAAA 58.262 37.500 22.50 0.00 0.00 2.52
3590 4157 5.583854 AGATCACACACATATCTGCAGAAAC 59.416 40.000 22.50 0.00 0.00 2.78
3591 4158 4.898320 TCACACACATATCTGCAGAAACT 58.102 39.130 22.50 7.07 0.00 2.66
3592 4159 4.692155 TCACACACATATCTGCAGAAACTG 59.308 41.667 22.50 19.24 34.12 3.16
3593 4160 4.005650 ACACACATATCTGCAGAAACTGG 58.994 43.478 22.50 12.98 31.21 4.00
3594 4161 3.012518 ACACATATCTGCAGAAACTGGC 58.987 45.455 22.50 0.00 31.21 4.85
3595 4162 3.011818 CACATATCTGCAGAAACTGGCA 58.988 45.455 22.50 0.00 38.52 4.92
3596 4163 3.441222 CACATATCTGCAGAAACTGGCAA 59.559 43.478 22.50 0.00 39.93 4.52
3597 4164 4.097437 CACATATCTGCAGAAACTGGCAAT 59.903 41.667 22.50 2.92 39.93 3.56
3598 4165 4.097437 ACATATCTGCAGAAACTGGCAATG 59.903 41.667 22.50 14.94 39.93 2.82
3599 4166 2.275134 TCTGCAGAAACTGGCAATGA 57.725 45.000 15.67 0.00 39.93 2.57
3600 4167 2.585330 TCTGCAGAAACTGGCAATGAA 58.415 42.857 15.67 0.00 39.93 2.57
3601 4168 2.957680 TCTGCAGAAACTGGCAATGAAA 59.042 40.909 15.67 0.00 39.93 2.69
3602 4169 3.575256 TCTGCAGAAACTGGCAATGAAAT 59.425 39.130 15.67 0.00 39.93 2.17
3603 4170 3.655486 TGCAGAAACTGGCAATGAAATG 58.345 40.909 0.00 0.00 37.03 2.32
3604 4171 2.414138 GCAGAAACTGGCAATGAAATGC 59.586 45.455 0.00 0.00 45.67 3.56
3605 4172 3.863400 GCAGAAACTGGCAATGAAATGCT 60.863 43.478 0.00 0.00 45.68 3.79
3606 4173 3.678072 CAGAAACTGGCAATGAAATGCTG 59.322 43.478 0.00 0.00 45.68 4.41
3607 4174 3.575256 AGAAACTGGCAATGAAATGCTGA 59.425 39.130 0.00 0.00 45.68 4.26
3608 4175 4.039488 AGAAACTGGCAATGAAATGCTGAA 59.961 37.500 0.00 0.00 45.68 3.02
3609 4176 4.339872 AACTGGCAATGAAATGCTGAAA 57.660 36.364 0.00 0.00 45.68 2.69
3610 4177 3.656559 ACTGGCAATGAAATGCTGAAAC 58.343 40.909 0.00 0.00 45.68 2.78
3611 4178 3.069872 ACTGGCAATGAAATGCTGAAACA 59.930 39.130 0.00 0.00 45.68 2.83
3612 4179 4.250464 CTGGCAATGAAATGCTGAAACAT 58.750 39.130 0.00 0.00 45.68 2.71
3613 4180 3.997681 TGGCAATGAAATGCTGAAACATG 59.002 39.130 0.00 0.00 45.68 3.21
3614 4181 3.181514 GGCAATGAAATGCTGAAACATGC 60.182 43.478 0.00 0.00 45.68 4.06
3615 4182 3.682858 GCAATGAAATGCTGAAACATGCT 59.317 39.130 0.00 0.00 43.06 3.79
3616 4183 4.865925 GCAATGAAATGCTGAAACATGCTA 59.134 37.500 0.00 0.00 43.06 3.49
3617 4184 5.005394 GCAATGAAATGCTGAAACATGCTAG 59.995 40.000 0.00 0.00 43.06 3.42
3618 4185 4.707030 TGAAATGCTGAAACATGCTAGG 57.293 40.909 0.00 0.00 0.00 3.02
3619 4186 4.334552 TGAAATGCTGAAACATGCTAGGA 58.665 39.130 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 7.915293 TCTTCGCCAAGAGTTCAAATATAAA 57.085 32.000 0.00 0.00 33.38 1.40
92 93 3.126171 CGTTCGAAATACATTGAAGGCCA 59.874 43.478 5.01 0.00 0.00 5.36
233 241 6.757897 TGAAACTGAAATGTCAACTTCTGT 57.242 33.333 7.71 5.32 35.86 3.41
457 474 3.709987 CTTTTGTGAAAGAAGCCAGTGG 58.290 45.455 4.20 4.20 44.03 4.00
583 614 9.678260 TGGGTTCCAAAAATGAAAATAATATGG 57.322 29.630 0.00 0.00 0.00 2.74
590 626 7.559170 TGAAATGTGGGTTCCAAAAATGAAAAT 59.441 29.630 0.00 0.00 34.18 1.82
711 916 1.910580 ATCCACCTCAAACGGCCGAT 61.911 55.000 35.90 19.90 0.00 4.18
712 917 2.589157 ATCCACCTCAAACGGCCGA 61.589 57.895 35.90 8.44 0.00 5.54
713 918 2.046314 ATCCACCTCAAACGGCCG 60.046 61.111 26.86 26.86 0.00 6.13
714 919 2.046285 CCATCCACCTCAAACGGCC 61.046 63.158 0.00 0.00 0.00 6.13
715 920 0.893727 AACCATCCACCTCAAACGGC 60.894 55.000 0.00 0.00 0.00 5.68
716 921 1.616159 AAACCATCCACCTCAAACGG 58.384 50.000 0.00 0.00 0.00 4.44
717 922 2.621055 TCAAAACCATCCACCTCAAACG 59.379 45.455 0.00 0.00 0.00 3.60
718 923 3.243737 GGTCAAAACCATCCACCTCAAAC 60.244 47.826 0.00 0.00 45.68 2.93
754 959 3.055385 TGATTACCTAGAACACCACCAGC 60.055 47.826 0.00 0.00 0.00 4.85
755 960 4.819105 TGATTACCTAGAACACCACCAG 57.181 45.455 0.00 0.00 0.00 4.00
756 961 5.514136 CCTTTGATTACCTAGAACACCACCA 60.514 44.000 0.00 0.00 0.00 4.17
757 962 4.941873 CCTTTGATTACCTAGAACACCACC 59.058 45.833 0.00 0.00 0.00 4.61
759 964 5.546499 ACTCCTTTGATTACCTAGAACACCA 59.454 40.000 0.00 0.00 0.00 4.17
779 984 0.869454 CGATCTCGCAGCAGAACTCC 60.869 60.000 0.00 0.00 0.00 3.85
824 1029 3.637911 ACAATCCAATACCGCTAACCA 57.362 42.857 0.00 0.00 0.00 3.67
830 1035 1.816224 ACACCAACAATCCAATACCGC 59.184 47.619 0.00 0.00 0.00 5.68
846 1051 3.633065 TGGTTAAAGTACCTTGCAACACC 59.367 43.478 0.00 0.00 39.04 4.16
911 1131 5.761234 GGGACGAACCTATATATGCAACAAA 59.239 40.000 0.00 0.00 38.98 2.83
924 1144 2.181125 TGCAACATAGGGACGAACCTA 58.819 47.619 11.24 11.24 46.55 3.08
925 1145 0.981183 TGCAACATAGGGACGAACCT 59.019 50.000 7.72 7.72 44.75 3.50
948 1168 9.611284 CAATCGTTCAGAATAGATTTTCACAAA 57.389 29.630 11.83 0.00 31.70 2.83
951 1171 7.065803 TCCCAATCGTTCAGAATAGATTTTCAC 59.934 37.037 11.83 0.00 31.70 3.18
969 1189 3.571571 CATATGCTGCAAATCCCAATCG 58.428 45.455 6.36 0.00 0.00 3.34
1030 1250 4.327357 AGTTTATCGTTGAGATGCGAACTG 59.673 41.667 0.00 0.00 40.40 3.16
1063 1288 2.123640 GGGACCGAGGGAGAGAGG 60.124 72.222 0.00 0.00 0.00 3.69
1085 1310 0.477597 TCTTGGTGGGGATGGGACTT 60.478 55.000 0.00 0.00 0.00 3.01
1087 1312 0.034089 CTTCTTGGTGGGGATGGGAC 60.034 60.000 0.00 0.00 0.00 4.46
1088 1313 0.477597 ACTTCTTGGTGGGGATGGGA 60.478 55.000 0.00 0.00 0.00 4.37
1089 1314 0.409484 AACTTCTTGGTGGGGATGGG 59.591 55.000 0.00 0.00 0.00 4.00
1090 1315 2.171003 GAAACTTCTTGGTGGGGATGG 58.829 52.381 0.00 0.00 0.00 3.51
1091 1316 2.875296 TGAAACTTCTTGGTGGGGATG 58.125 47.619 0.00 0.00 0.00 3.51
1092 1317 3.140144 TCTTGAAACTTCTTGGTGGGGAT 59.860 43.478 0.00 0.00 0.00 3.85
1093 1318 2.512056 TCTTGAAACTTCTTGGTGGGGA 59.488 45.455 0.00 0.00 0.00 4.81
1250 1475 2.125512 CCACCTAGTGCAGACGCC 60.126 66.667 0.00 0.00 37.32 5.68
1477 1702 0.951040 CGGTGAGGAGGTTGAGCAAC 60.951 60.000 4.81 4.81 40.45 4.17
1750 1975 1.144936 CTCGATCCTGTCCTTGGGC 59.855 63.158 0.00 0.00 0.00 5.36
1757 1982 1.025812 ATCACGTCCTCGATCCTGTC 58.974 55.000 0.00 0.00 40.62 3.51
1867 2098 3.923563 GAACGTGGAGAGCTGCGCT 62.924 63.158 9.73 5.34 43.88 5.92
1972 2203 1.067364 CTCACGATCATCAGCAGCTCT 59.933 52.381 0.00 0.00 0.00 4.09
2030 2261 0.891373 TTCTTCTCCTCCAGCACGAG 59.109 55.000 0.00 0.00 0.00 4.18
2048 2279 3.528370 CGCTCCCCCGACGATCTT 61.528 66.667 0.00 0.00 0.00 2.40
2057 2288 4.717313 GTTGTGGTCCGCTCCCCC 62.717 72.222 3.62 0.00 0.00 5.40
2083 2314 0.321671 TCCAAGAAGCCAAGACTCGG 59.678 55.000 0.00 0.00 0.00 4.63
2434 2665 2.548480 TCACTACTCACTGTCAGTGTCG 59.452 50.000 27.97 22.18 46.03 4.35
2555 2786 4.336433 GGCGAGGATGAAGAATCAAATCAA 59.664 41.667 0.00 0.00 39.49 2.57
2580 2811 6.209986 TGATGAAGAACAATGAAGCAAATCCT 59.790 34.615 0.00 0.00 0.00 3.24
2597 2828 7.277396 TGTTCATGCATCTCTTATGATGAAGA 58.723 34.615 0.00 0.00 44.71 2.87
2598 2829 7.492352 TGTTCATGCATCTCTTATGATGAAG 57.508 36.000 0.00 0.00 44.71 3.02
2636 2887 2.106511 ACACACCACCATTAGCTGAACT 59.893 45.455 0.00 0.00 0.00 3.01
2657 2908 6.681729 ACTATTCAGGACCTTGTTTCAGTA 57.318 37.500 0.00 0.00 0.00 2.74
2704 2961 4.225942 TGCCTCAGGAACATATCTGAACTT 59.774 41.667 0.00 0.00 39.23 2.66
2713 2970 1.908619 TCTTGCTGCCTCAGGAACATA 59.091 47.619 0.00 0.00 36.92 2.29
2722 2979 3.630769 TCATCATTCAATCTTGCTGCCTC 59.369 43.478 0.00 0.00 0.00 4.70
2724 2981 4.380841 TTCATCATTCAATCTTGCTGCC 57.619 40.909 0.00 0.00 0.00 4.85
2727 2984 7.093465 ACCAAAGATTCATCATTCAATCTTGCT 60.093 33.333 7.49 0.00 44.87 3.91
2728 2985 7.039882 ACCAAAGATTCATCATTCAATCTTGC 58.960 34.615 7.49 0.00 44.87 4.01
2734 2991 8.469200 GGACATTACCAAAGATTCATCATTCAA 58.531 33.333 0.00 0.00 0.00 2.69
2735 2992 7.068593 GGGACATTACCAAAGATTCATCATTCA 59.931 37.037 0.00 0.00 0.00 2.57
2736 2993 7.068593 TGGGACATTACCAAAGATTCATCATTC 59.931 37.037 0.00 0.00 34.44 2.67
2737 2994 6.896860 TGGGACATTACCAAAGATTCATCATT 59.103 34.615 0.00 0.00 34.44 2.57
2738 2995 6.434302 TGGGACATTACCAAAGATTCATCAT 58.566 36.000 0.00 0.00 34.44 2.45
2739 2996 5.825532 TGGGACATTACCAAAGATTCATCA 58.174 37.500 0.00 0.00 34.44 3.07
2752 3009 9.167311 GATAGGTATCAATCAATGGGACATTAC 57.833 37.037 0.00 0.00 36.41 1.89
2753 3010 9.116080 AGATAGGTATCAATCAATGGGACATTA 57.884 33.333 0.00 0.00 38.01 1.90
2754 3011 7.993416 AGATAGGTATCAATCAATGGGACATT 58.007 34.615 0.00 0.00 38.01 2.71
2755 3012 7.460402 AGAGATAGGTATCAATCAATGGGACAT 59.540 37.037 0.00 0.00 38.01 3.06
2756 3013 6.789457 AGAGATAGGTATCAATCAATGGGACA 59.211 38.462 0.00 0.00 37.79 4.02
2757 3014 7.251321 AGAGATAGGTATCAATCAATGGGAC 57.749 40.000 0.00 0.00 35.17 4.46
2758 3015 7.293299 ACAAGAGATAGGTATCAATCAATGGGA 59.707 37.037 0.00 0.00 35.17 4.37
2759 3016 7.389884 CACAAGAGATAGGTATCAATCAATGGG 59.610 40.741 0.00 0.00 35.17 4.00
2760 3017 8.152898 TCACAAGAGATAGGTATCAATCAATGG 58.847 37.037 0.00 0.00 35.17 3.16
2761 3018 9.205719 CTCACAAGAGATAGGTATCAATCAATG 57.794 37.037 0.00 0.00 44.98 2.82
2762 3019 7.877097 GCTCACAAGAGATAGGTATCAATCAAT 59.123 37.037 0.00 0.00 44.98 2.57
2763 3020 7.070447 AGCTCACAAGAGATAGGTATCAATCAA 59.930 37.037 0.00 0.00 44.98 2.57
2764 3021 6.552725 AGCTCACAAGAGATAGGTATCAATCA 59.447 38.462 0.00 0.00 44.98 2.57
2765 3022 6.991938 AGCTCACAAGAGATAGGTATCAATC 58.008 40.000 0.00 0.00 44.98 2.67
2766 3023 6.552725 TGAGCTCACAAGAGATAGGTATCAAT 59.447 38.462 13.74 0.00 41.38 2.57
2767 3024 5.893824 TGAGCTCACAAGAGATAGGTATCAA 59.106 40.000 13.74 0.00 41.38 2.57
2768 3025 5.449553 TGAGCTCACAAGAGATAGGTATCA 58.550 41.667 13.74 0.00 41.38 2.15
2769 3026 6.588719 ATGAGCTCACAAGAGATAGGTATC 57.411 41.667 20.97 0.00 41.38 2.24
2770 3027 9.934784 ATATATGAGCTCACAAGAGATAGGTAT 57.065 33.333 20.97 10.58 41.38 2.73
2771 3028 9.760926 AATATATGAGCTCACAAGAGATAGGTA 57.239 33.333 20.97 2.95 41.38 3.08
2772 3029 8.663209 AATATATGAGCTCACAAGAGATAGGT 57.337 34.615 20.97 0.33 41.38 3.08
2850 3107 1.340017 GGCACTGAGGCTGGTTTCATA 60.340 52.381 0.00 0.00 40.24 2.15
2920 3177 1.812571 CCTCCATTGCACTTGTACCAC 59.187 52.381 0.00 0.00 0.00 4.16
2923 3180 1.812571 CACCCTCCATTGCACTTGTAC 59.187 52.381 0.00 0.00 0.00 2.90
2925 3182 0.185901 ACACCCTCCATTGCACTTGT 59.814 50.000 0.00 0.00 0.00 3.16
3039 3297 3.699779 TGTTTATGTGCAGCAAACGAA 57.300 38.095 0.00 0.00 35.41 3.85
3051 3309 4.852134 TCAGCAAGTGCATTGTTTATGT 57.148 36.364 6.00 0.00 45.16 2.29
3096 3354 9.650539 AGTTGACATACAATATATGCAGAGATC 57.349 33.333 0.00 0.00 40.76 2.75
3147 3706 3.203442 CCGCAGAATGGCAGCAAT 58.797 55.556 0.00 0.00 35.86 3.56
3191 3750 5.300539 GCTAGGTGAGAGAACTATGACATGA 59.699 44.000 0.00 0.00 0.00 3.07
3206 3765 0.603569 AACACGGACAGCTAGGTGAG 59.396 55.000 27.87 18.96 34.59 3.51
3207 3766 1.542915 GTAACACGGACAGCTAGGTGA 59.457 52.381 27.87 0.00 34.59 4.02
3212 3771 0.963225 TGCAGTAACACGGACAGCTA 59.037 50.000 0.00 0.00 31.17 3.32
3284 3851 3.304928 CCGTTGCTTCTTGCTTTCATTCT 60.305 43.478 0.00 0.00 43.37 2.40
3288 3855 1.388547 ACCGTTGCTTCTTGCTTTCA 58.611 45.000 0.00 0.00 43.37 2.69
3304 3871 1.193203 GCACGAGCATGATTCATACCG 59.807 52.381 0.00 6.00 41.58 4.02
3305 3872 2.957576 GCACGAGCATGATTCATACC 57.042 50.000 0.00 0.00 41.58 2.73
3317 3884 2.287373 ACGTAGAGTACTATGCACGAGC 59.713 50.000 17.21 0.00 38.71 5.03
3318 3885 3.554731 TCACGTAGAGTACTATGCACGAG 59.445 47.826 17.21 10.76 38.71 4.18
3319 3886 3.308053 GTCACGTAGAGTACTATGCACGA 59.692 47.826 17.21 5.12 38.71 4.35
3320 3887 3.545624 GGTCACGTAGAGTACTATGCACG 60.546 52.174 10.45 10.45 38.71 5.34
3321 3888 3.376234 TGGTCACGTAGAGTACTATGCAC 59.624 47.826 6.41 0.00 38.71 4.57
3322 3889 3.613030 TGGTCACGTAGAGTACTATGCA 58.387 45.455 6.41 0.00 38.71 3.96
3323 3890 4.627611 TTGGTCACGTAGAGTACTATGC 57.372 45.455 0.00 0.00 38.71 3.14
3324 3891 6.618811 ACTTTTGGTCACGTAGAGTACTATG 58.381 40.000 0.00 0.00 40.36 2.23
3325 3892 6.830873 ACTTTTGGTCACGTAGAGTACTAT 57.169 37.500 0.00 0.00 0.00 2.12
3326 3893 6.710295 TGTACTTTTGGTCACGTAGAGTACTA 59.290 38.462 13.90 2.86 38.97 1.82
3327 3894 5.532406 TGTACTTTTGGTCACGTAGAGTACT 59.468 40.000 13.90 0.00 38.97 2.73
3328 3895 5.762045 TGTACTTTTGGTCACGTAGAGTAC 58.238 41.667 8.45 8.45 38.78 2.73
3329 3896 6.207221 TCATGTACTTTTGGTCACGTAGAGTA 59.793 38.462 0.00 0.00 0.00 2.59
3330 3897 4.924305 TGTACTTTTGGTCACGTAGAGT 57.076 40.909 0.00 0.00 0.00 3.24
3331 3898 5.466819 TCATGTACTTTTGGTCACGTAGAG 58.533 41.667 0.00 0.00 0.00 2.43
3332 3899 5.456548 TCATGTACTTTTGGTCACGTAGA 57.543 39.130 0.00 0.00 0.00 2.59
3333 3900 6.367695 TGAATCATGTACTTTTGGTCACGTAG 59.632 38.462 0.00 0.00 0.00 3.51
3334 3901 6.224584 TGAATCATGTACTTTTGGTCACGTA 58.775 36.000 0.00 0.00 0.00 3.57
3335 3902 5.060506 TGAATCATGTACTTTTGGTCACGT 58.939 37.500 0.00 0.00 0.00 4.49
3336 3903 5.605564 TGAATCATGTACTTTTGGTCACG 57.394 39.130 0.00 0.00 0.00 4.35
3337 3904 5.048782 TGCTGAATCATGTACTTTTGGTCAC 60.049 40.000 0.00 0.00 0.00 3.67
3338 3905 5.069318 TGCTGAATCATGTACTTTTGGTCA 58.931 37.500 0.00 0.00 0.00 4.02
3339 3906 5.392380 CCTGCTGAATCATGTACTTTTGGTC 60.392 44.000 0.00 0.00 0.00 4.02
3340 3907 4.460382 CCTGCTGAATCATGTACTTTTGGT 59.540 41.667 0.00 0.00 0.00 3.67
3341 3908 4.676196 GCCTGCTGAATCATGTACTTTTGG 60.676 45.833 0.00 0.00 0.00 3.28
3342 3909 4.082625 TGCCTGCTGAATCATGTACTTTTG 60.083 41.667 0.00 0.00 0.00 2.44
3343 3910 4.081406 TGCCTGCTGAATCATGTACTTTT 58.919 39.130 0.00 0.00 0.00 2.27
3344 3911 3.441572 GTGCCTGCTGAATCATGTACTTT 59.558 43.478 0.00 0.00 0.00 2.66
3345 3912 3.012518 GTGCCTGCTGAATCATGTACTT 58.987 45.455 0.00 0.00 0.00 2.24
3346 3913 2.026915 TGTGCCTGCTGAATCATGTACT 60.027 45.455 0.00 0.00 0.00 2.73
3347 3914 2.096496 GTGTGCCTGCTGAATCATGTAC 59.904 50.000 0.00 0.00 0.00 2.90
3348 3915 2.026915 AGTGTGCCTGCTGAATCATGTA 60.027 45.455 0.00 0.00 0.00 2.29
3349 3916 1.171308 GTGTGCCTGCTGAATCATGT 58.829 50.000 0.00 0.00 0.00 3.21
3350 3917 1.400846 GAGTGTGCCTGCTGAATCATG 59.599 52.381 0.00 0.00 0.00 3.07
3351 3918 1.747709 GAGTGTGCCTGCTGAATCAT 58.252 50.000 0.00 0.00 0.00 2.45
3352 3919 0.671472 CGAGTGTGCCTGCTGAATCA 60.671 55.000 0.00 0.00 0.00 2.57
3353 3920 0.671781 ACGAGTGTGCCTGCTGAATC 60.672 55.000 0.00 0.00 0.00 2.52
3354 3921 0.608130 TACGAGTGTGCCTGCTGAAT 59.392 50.000 0.00 0.00 0.00 2.57
3355 3922 0.608130 ATACGAGTGTGCCTGCTGAA 59.392 50.000 0.00 0.00 0.00 3.02
3356 3923 0.173481 GATACGAGTGTGCCTGCTGA 59.827 55.000 0.00 0.00 0.00 4.26
3357 3924 0.174389 AGATACGAGTGTGCCTGCTG 59.826 55.000 0.00 0.00 0.00 4.41
3358 3925 0.457851 GAGATACGAGTGTGCCTGCT 59.542 55.000 0.00 0.00 0.00 4.24
3359 3926 0.528684 GGAGATACGAGTGTGCCTGC 60.529 60.000 0.00 0.00 0.00 4.85
3360 3927 1.066303 GAGGAGATACGAGTGTGCCTG 59.934 57.143 0.00 0.00 0.00 4.85
3361 3928 1.341089 TGAGGAGATACGAGTGTGCCT 60.341 52.381 0.00 0.00 0.00 4.75
3362 3929 1.103803 TGAGGAGATACGAGTGTGCC 58.896 55.000 0.00 0.00 0.00 5.01
3363 3930 2.736978 CATGAGGAGATACGAGTGTGC 58.263 52.381 0.00 0.00 0.00 4.57
3364 3931 2.099756 TGCATGAGGAGATACGAGTGTG 59.900 50.000 0.00 0.00 0.00 3.82
3365 3932 2.379005 TGCATGAGGAGATACGAGTGT 58.621 47.619 0.00 0.00 0.00 3.55
3366 3933 3.005155 TGATGCATGAGGAGATACGAGTG 59.995 47.826 2.46 0.00 0.00 3.51
3367 3934 3.225940 TGATGCATGAGGAGATACGAGT 58.774 45.455 2.46 0.00 0.00 4.18
3368 3935 3.930634 TGATGCATGAGGAGATACGAG 57.069 47.619 2.46 0.00 0.00 4.18
3369 3936 5.220931 CGATATGATGCATGAGGAGATACGA 60.221 44.000 2.46 0.00 0.00 3.43
3370 3937 4.974888 CGATATGATGCATGAGGAGATACG 59.025 45.833 2.46 0.00 0.00 3.06
3371 3938 6.141560 TCGATATGATGCATGAGGAGATAC 57.858 41.667 2.46 0.00 0.00 2.24
3372 3939 6.604795 TCTTCGATATGATGCATGAGGAGATA 59.395 38.462 2.46 0.00 0.00 1.98
3373 3940 5.421374 TCTTCGATATGATGCATGAGGAGAT 59.579 40.000 2.46 0.00 0.00 2.75
3374 3941 4.768968 TCTTCGATATGATGCATGAGGAGA 59.231 41.667 2.46 0.00 0.00 3.71
3375 3942 5.069501 TCTTCGATATGATGCATGAGGAG 57.930 43.478 2.46 0.00 0.00 3.69
3376 3943 5.186409 TCATCTTCGATATGATGCATGAGGA 59.814 40.000 2.46 0.00 39.69 3.71
3377 3944 5.416947 TCATCTTCGATATGATGCATGAGG 58.583 41.667 2.46 0.00 39.69 3.86
3378 3945 6.757010 TGATCATCTTCGATATGATGCATGAG 59.243 38.462 21.88 0.00 42.68 2.90
3379 3946 6.534079 GTGATCATCTTCGATATGATGCATGA 59.466 38.462 21.88 0.00 42.68 3.07
3380 3947 6.312918 TGTGATCATCTTCGATATGATGCATG 59.687 38.462 21.88 0.00 42.68 4.06
3381 3948 6.313164 GTGTGATCATCTTCGATATGATGCAT 59.687 38.462 21.88 0.00 42.68 3.96
3382 3949 5.636543 GTGTGATCATCTTCGATATGATGCA 59.363 40.000 21.88 17.67 42.68 3.96
3383 3950 5.063186 GGTGTGATCATCTTCGATATGATGC 59.937 44.000 21.88 16.05 42.68 3.91
3384 3951 6.396450 AGGTGTGATCATCTTCGATATGATG 58.604 40.000 21.88 17.81 42.68 3.07
3385 3952 6.350864 GGAGGTGTGATCATCTTCGATATGAT 60.351 42.308 18.63 18.63 44.74 2.45
3386 3953 5.047731 GGAGGTGTGATCATCTTCGATATGA 60.048 44.000 11.96 11.96 34.86 2.15
3387 3954 5.047448 AGGAGGTGTGATCATCTTCGATATG 60.047 44.000 0.00 2.60 35.54 1.78
3388 3955 5.083122 AGGAGGTGTGATCATCTTCGATAT 58.917 41.667 0.00 0.00 35.54 1.63
3389 3956 4.474394 AGGAGGTGTGATCATCTTCGATA 58.526 43.478 0.00 0.00 35.54 2.92
3390 3957 3.303938 AGGAGGTGTGATCATCTTCGAT 58.696 45.455 0.00 0.00 35.54 3.59
3391 3958 2.690497 GAGGAGGTGTGATCATCTTCGA 59.310 50.000 0.00 0.00 35.54 3.71
3392 3959 2.428530 TGAGGAGGTGTGATCATCTTCG 59.571 50.000 0.00 0.00 35.54 3.79
3393 3960 4.502950 GGATGAGGAGGTGTGATCATCTTC 60.503 50.000 12.31 0.00 44.77 2.87
3394 3961 3.390639 GGATGAGGAGGTGTGATCATCTT 59.609 47.826 12.31 0.00 44.77 2.40
3395 3962 2.971330 GGATGAGGAGGTGTGATCATCT 59.029 50.000 12.31 0.00 44.77 2.90
3396 3963 2.702478 TGGATGAGGAGGTGTGATCATC 59.298 50.000 0.00 5.64 44.70 2.92
3397 3964 2.704596 CTGGATGAGGAGGTGTGATCAT 59.295 50.000 0.00 0.00 35.16 2.45
3398 3965 2.113807 CTGGATGAGGAGGTGTGATCA 58.886 52.381 0.00 0.00 0.00 2.92
3399 3966 2.114616 ACTGGATGAGGAGGTGTGATC 58.885 52.381 0.00 0.00 0.00 2.92
3400 3967 2.260639 ACTGGATGAGGAGGTGTGAT 57.739 50.000 0.00 0.00 0.00 3.06
3401 3968 2.311841 TCTACTGGATGAGGAGGTGTGA 59.688 50.000 0.00 0.00 32.60 3.58
3402 3969 2.692557 CTCTACTGGATGAGGAGGTGTG 59.307 54.545 0.00 0.00 32.60 3.82
3403 3970 3.025322 CTCTACTGGATGAGGAGGTGT 57.975 52.381 0.00 0.00 32.60 4.16
3409 3976 1.323412 CGTCCCTCTACTGGATGAGG 58.677 60.000 0.00 0.00 46.91 3.86
3410 3977 1.950909 GACGTCCCTCTACTGGATGAG 59.049 57.143 3.51 0.00 40.69 2.90
3411 3978 1.746171 CGACGTCCCTCTACTGGATGA 60.746 57.143 10.58 0.00 40.69 2.92
3412 3979 0.663688 CGACGTCCCTCTACTGGATG 59.336 60.000 10.58 0.00 43.30 3.51
3413 3980 0.545171 TCGACGTCCCTCTACTGGAT 59.455 55.000 10.58 0.00 33.65 3.41
3414 3981 0.325933 TTCGACGTCCCTCTACTGGA 59.674 55.000 10.58 0.00 0.00 3.86
3415 3982 0.450983 GTTCGACGTCCCTCTACTGG 59.549 60.000 10.58 0.00 0.00 4.00
3416 3983 1.397692 GAGTTCGACGTCCCTCTACTG 59.602 57.143 10.58 0.00 0.00 2.74
3417 3984 1.678425 GGAGTTCGACGTCCCTCTACT 60.678 57.143 10.58 6.21 0.00 2.57
3418 3985 0.731994 GGAGTTCGACGTCCCTCTAC 59.268 60.000 10.58 2.56 0.00 2.59
3419 3986 0.617413 AGGAGTTCGACGTCCCTCTA 59.383 55.000 10.58 0.00 32.70 2.43
3420 3987 0.961358 CAGGAGTTCGACGTCCCTCT 60.961 60.000 10.58 5.37 32.70 3.69
3421 3988 1.507174 CAGGAGTTCGACGTCCCTC 59.493 63.158 10.58 12.32 32.70 4.30
3422 3989 2.637383 GCAGGAGTTCGACGTCCCT 61.637 63.158 10.58 7.26 32.70 4.20
3423 3990 2.126031 GCAGGAGTTCGACGTCCC 60.126 66.667 10.58 4.73 32.70 4.46
3424 3991 1.444553 CTGCAGGAGTTCGACGTCC 60.445 63.158 10.58 4.31 0.00 4.79
3425 3992 2.089349 GCTGCAGGAGTTCGACGTC 61.089 63.158 17.12 5.18 0.00 4.34
3426 3993 2.049063 GCTGCAGGAGTTCGACGT 60.049 61.111 17.12 0.00 0.00 4.34
3427 3994 1.803519 GAGCTGCAGGAGTTCGACG 60.804 63.158 17.12 0.00 0.00 5.12
3428 3995 1.446966 GGAGCTGCAGGAGTTCGAC 60.447 63.158 17.12 0.00 32.75 4.20
3429 3996 2.973899 GGAGCTGCAGGAGTTCGA 59.026 61.111 17.12 0.00 32.75 3.71
3430 3997 2.507992 CGGAGCTGCAGGAGTTCG 60.508 66.667 17.12 0.00 32.75 3.95
3431 3998 2.125350 CCGGAGCTGCAGGAGTTC 60.125 66.667 17.12 0.00 33.08 3.01
3432 3999 4.400961 GCCGGAGCTGCAGGAGTT 62.401 66.667 17.12 0.00 33.08 3.01
3440 4007 3.842923 ATCGAGTGGCCGGAGCTG 61.843 66.667 5.05 0.00 39.73 4.24
3441 4008 3.842923 CATCGAGTGGCCGGAGCT 61.843 66.667 5.05 0.00 39.73 4.09
3442 4009 3.157217 ATCATCGAGTGGCCGGAGC 62.157 63.158 5.05 0.00 38.76 4.70
3443 4010 1.300465 CATCATCGAGTGGCCGGAG 60.300 63.158 5.05 0.00 0.00 4.63
3444 4011 0.753848 TACATCATCGAGTGGCCGGA 60.754 55.000 5.05 0.00 0.00 5.14
3445 4012 0.319040 CTACATCATCGAGTGGCCGG 60.319 60.000 0.00 0.00 0.00 6.13
3446 4013 0.941463 GCTACATCATCGAGTGGCCG 60.941 60.000 0.00 0.00 36.39 6.13
3447 4014 0.104855 TGCTACATCATCGAGTGGCC 59.895 55.000 8.12 0.00 40.94 5.36
3448 4015 1.863454 CTTGCTACATCATCGAGTGGC 59.137 52.381 4.25 4.25 41.85 5.01
3449 4016 3.443099 TCTTGCTACATCATCGAGTGG 57.557 47.619 0.00 0.00 0.00 4.00
3450 4017 4.627035 TGTTTCTTGCTACATCATCGAGTG 59.373 41.667 0.00 0.00 0.00 3.51
3451 4018 4.820897 TGTTTCTTGCTACATCATCGAGT 58.179 39.130 0.00 0.00 0.00 4.18
3452 4019 5.292834 ACATGTTTCTTGCTACATCATCGAG 59.707 40.000 0.00 0.00 32.88 4.04
3453 4020 5.178061 ACATGTTTCTTGCTACATCATCGA 58.822 37.500 0.00 0.00 32.88 3.59
3454 4021 5.475273 ACATGTTTCTTGCTACATCATCG 57.525 39.130 0.00 0.00 32.88 3.84
3455 4022 6.037500 TGCTACATGTTTCTTGCTACATCATC 59.962 38.462 2.30 0.00 32.88 2.92
3456 4023 5.882000 TGCTACATGTTTCTTGCTACATCAT 59.118 36.000 2.30 0.00 32.88 2.45
3457 4024 5.244755 TGCTACATGTTTCTTGCTACATCA 58.755 37.500 2.30 0.00 32.88 3.07
3458 4025 5.582269 TCTGCTACATGTTTCTTGCTACATC 59.418 40.000 2.30 0.00 32.88 3.06
3459 4026 5.491070 TCTGCTACATGTTTCTTGCTACAT 58.509 37.500 2.30 0.00 35.45 2.29
3460 4027 4.893608 TCTGCTACATGTTTCTTGCTACA 58.106 39.130 2.30 0.00 0.00 2.74
3461 4028 5.862924 TTCTGCTACATGTTTCTTGCTAC 57.137 39.130 2.30 0.00 0.00 3.58
3462 4029 6.314648 CAGATTCTGCTACATGTTTCTTGCTA 59.685 38.462 2.30 0.00 0.00 3.49
3463 4030 5.123502 CAGATTCTGCTACATGTTTCTTGCT 59.876 40.000 2.30 0.00 0.00 3.91
3464 4031 5.330295 CAGATTCTGCTACATGTTTCTTGC 58.670 41.667 2.30 2.20 0.00 4.01
3465 4032 5.645067 TCCAGATTCTGCTACATGTTTCTTG 59.355 40.000 2.30 0.00 0.00 3.02
3466 4033 5.809001 TCCAGATTCTGCTACATGTTTCTT 58.191 37.500 2.30 0.00 0.00 2.52
3467 4034 5.426689 TCCAGATTCTGCTACATGTTTCT 57.573 39.130 2.30 0.00 0.00 2.52
3468 4035 5.819379 TGATCCAGATTCTGCTACATGTTTC 59.181 40.000 2.30 0.00 0.00 2.78
3469 4036 5.587844 GTGATCCAGATTCTGCTACATGTTT 59.412 40.000 2.30 0.00 0.00 2.83
3470 4037 5.121811 GTGATCCAGATTCTGCTACATGTT 58.878 41.667 2.30 0.00 0.00 2.71
3471 4038 4.162888 TGTGATCCAGATTCTGCTACATGT 59.837 41.667 8.23 2.69 0.00 3.21
3472 4039 4.700700 TGTGATCCAGATTCTGCTACATG 58.299 43.478 8.23 0.00 0.00 3.21
3473 4040 4.743045 GCTGTGATCCAGATTCTGCTACAT 60.743 45.833 8.23 0.00 44.49 2.29
3474 4041 3.431346 GCTGTGATCCAGATTCTGCTACA 60.431 47.826 8.23 8.67 44.49 2.74
3475 4042 3.129871 GCTGTGATCCAGATTCTGCTAC 58.870 50.000 8.23 4.89 44.49 3.58
3476 4043 2.767960 TGCTGTGATCCAGATTCTGCTA 59.232 45.455 8.23 0.00 44.49 3.49
3477 4044 1.558294 TGCTGTGATCCAGATTCTGCT 59.442 47.619 8.23 0.00 44.49 4.24
3478 4045 1.669779 GTGCTGTGATCCAGATTCTGC 59.330 52.381 8.23 0.00 44.49 4.26
3479 4046 2.937149 CAGTGCTGTGATCCAGATTCTG 59.063 50.000 13.48 6.70 44.49 3.02
3480 4047 2.836372 TCAGTGCTGTGATCCAGATTCT 59.164 45.455 13.48 6.46 44.49 2.40
3481 4048 2.935201 GTCAGTGCTGTGATCCAGATTC 59.065 50.000 13.48 4.79 44.49 2.52
3482 4049 2.676176 CGTCAGTGCTGTGATCCAGATT 60.676 50.000 13.48 0.00 44.49 2.40
3483 4050 1.134877 CGTCAGTGCTGTGATCCAGAT 60.135 52.381 13.48 0.00 44.49 2.90
3484 4051 0.244721 CGTCAGTGCTGTGATCCAGA 59.755 55.000 13.48 0.00 44.49 3.86
3485 4052 0.244721 TCGTCAGTGCTGTGATCCAG 59.755 55.000 6.79 6.79 44.53 3.86
3486 4053 0.038251 GTCGTCAGTGCTGTGATCCA 60.038 55.000 0.00 0.00 0.00 3.41
3487 4054 1.073216 CGTCGTCAGTGCTGTGATCC 61.073 60.000 0.00 0.00 0.00 3.36
3488 4055 1.073216 CCGTCGTCAGTGCTGTGATC 61.073 60.000 0.00 0.00 0.00 2.92
3489 4056 1.080501 CCGTCGTCAGTGCTGTGAT 60.081 57.895 0.00 0.00 0.00 3.06
3490 4057 2.335011 CCGTCGTCAGTGCTGTGA 59.665 61.111 0.00 0.00 0.00 3.58
3491 4058 3.406361 GCCGTCGTCAGTGCTGTG 61.406 66.667 0.00 0.00 0.00 3.66
3492 4059 3.848347 CTGCCGTCGTCAGTGCTGT 62.848 63.158 0.00 0.00 0.00 4.40
3493 4060 2.472232 TACTGCCGTCGTCAGTGCTG 62.472 60.000 18.57 7.37 43.85 4.41
3494 4061 1.802337 TTACTGCCGTCGTCAGTGCT 61.802 55.000 18.57 0.00 43.85 4.40
3495 4062 0.736325 ATTACTGCCGTCGTCAGTGC 60.736 55.000 18.57 1.23 43.85 4.40
3496 4063 0.992072 CATTACTGCCGTCGTCAGTG 59.008 55.000 18.57 0.00 43.85 3.66
3497 4064 0.601558 ACATTACTGCCGTCGTCAGT 59.398 50.000 14.01 14.01 45.71 3.41
3498 4065 1.710013 AACATTACTGCCGTCGTCAG 58.290 50.000 0.94 0.94 37.56 3.51
3499 4066 1.795872 CAAACATTACTGCCGTCGTCA 59.204 47.619 0.00 0.00 0.00 4.35
3500 4067 1.127951 CCAAACATTACTGCCGTCGTC 59.872 52.381 0.00 0.00 0.00 4.20
3501 4068 1.153353 CCAAACATTACTGCCGTCGT 58.847 50.000 0.00 0.00 0.00 4.34
3502 4069 0.179200 GCCAAACATTACTGCCGTCG 60.179 55.000 0.00 0.00 0.00 5.12
3503 4070 0.179200 CGCCAAACATTACTGCCGTC 60.179 55.000 0.00 0.00 0.00 4.79
3504 4071 1.873165 CGCCAAACATTACTGCCGT 59.127 52.632 0.00 0.00 0.00 5.68
3505 4072 1.514014 GCGCCAAACATTACTGCCG 60.514 57.895 0.00 0.00 0.00 5.69
3506 4073 1.153842 GGCGCCAAACATTACTGCC 60.154 57.895 24.80 0.00 0.00 4.85
3507 4074 0.456653 CAGGCGCCAAACATTACTGC 60.457 55.000 31.54 0.00 0.00 4.40
3508 4075 0.881118 ACAGGCGCCAAACATTACTG 59.119 50.000 31.54 17.15 0.00 2.74
3509 4076 1.539827 GAACAGGCGCCAAACATTACT 59.460 47.619 31.54 0.00 0.00 2.24
3510 4077 1.268352 TGAACAGGCGCCAAACATTAC 59.732 47.619 31.54 11.46 0.00 1.89
3511 4078 1.268352 GTGAACAGGCGCCAAACATTA 59.732 47.619 31.54 5.39 0.00 1.90
3512 4079 0.031994 GTGAACAGGCGCCAAACATT 59.968 50.000 31.54 14.72 0.00 2.71
3513 4080 1.106351 TGTGAACAGGCGCCAAACAT 61.106 50.000 31.54 9.81 0.00 2.71
3514 4081 1.723608 CTGTGAACAGGCGCCAAACA 61.724 55.000 31.54 21.85 40.20 2.83
3515 4082 1.008538 CTGTGAACAGGCGCCAAAC 60.009 57.895 31.54 18.46 40.20 2.93
3516 4083 3.431055 CTGTGAACAGGCGCCAAA 58.569 55.556 31.54 5.75 40.20 3.28
3527 4094 8.038944 GTCTATACTAATGTTGGTTCCTGTGAA 58.961 37.037 0.00 0.00 0.00 3.18
3528 4095 7.399191 AGTCTATACTAATGTTGGTTCCTGTGA 59.601 37.037 0.00 0.00 32.84 3.58
3529 4096 7.492669 CAGTCTATACTAATGTTGGTTCCTGTG 59.507 40.741 0.00 0.00 33.48 3.66
3530 4097 7.556844 CAGTCTATACTAATGTTGGTTCCTGT 58.443 38.462 0.00 0.00 33.48 4.00
3531 4098 6.480320 GCAGTCTATACTAATGTTGGTTCCTG 59.520 42.308 0.00 0.00 33.48 3.86
3532 4099 6.384305 AGCAGTCTATACTAATGTTGGTTCCT 59.616 38.462 0.00 0.00 33.48 3.36
3533 4100 6.480320 CAGCAGTCTATACTAATGTTGGTTCC 59.520 42.308 0.00 0.00 33.48 3.62
3534 4101 7.042335 ACAGCAGTCTATACTAATGTTGGTTC 58.958 38.462 0.00 0.00 32.46 3.62
3535 4102 6.947464 ACAGCAGTCTATACTAATGTTGGTT 58.053 36.000 0.00 0.00 32.46 3.67
3536 4103 6.546428 ACAGCAGTCTATACTAATGTTGGT 57.454 37.500 0.00 0.00 32.46 3.67
3537 4104 9.547753 AAATACAGCAGTCTATACTAATGTTGG 57.452 33.333 3.76 0.00 35.95 3.77
3545 4112 8.918116 TGATCTCAAAATACAGCAGTCTATACT 58.082 33.333 0.00 0.00 35.91 2.12
3546 4113 8.973378 GTGATCTCAAAATACAGCAGTCTATAC 58.027 37.037 0.00 0.00 0.00 1.47
3547 4114 8.695456 TGTGATCTCAAAATACAGCAGTCTATA 58.305 33.333 0.00 0.00 0.00 1.31
3548 4115 7.493971 GTGTGATCTCAAAATACAGCAGTCTAT 59.506 37.037 0.00 0.00 0.00 1.98
3549 4116 6.813649 GTGTGATCTCAAAATACAGCAGTCTA 59.186 38.462 0.00 0.00 0.00 2.59
3550 4117 5.641209 GTGTGATCTCAAAATACAGCAGTCT 59.359 40.000 0.00 0.00 0.00 3.24
3551 4118 5.409520 TGTGTGATCTCAAAATACAGCAGTC 59.590 40.000 0.00 0.00 0.00 3.51
3552 4119 5.180117 GTGTGTGATCTCAAAATACAGCAGT 59.820 40.000 0.00 0.00 0.00 4.40
3553 4120 5.179929 TGTGTGTGATCTCAAAATACAGCAG 59.820 40.000 0.00 0.00 0.00 4.24
3554 4121 5.062528 TGTGTGTGATCTCAAAATACAGCA 58.937 37.500 0.00 0.00 0.00 4.41
3555 4122 5.611796 TGTGTGTGATCTCAAAATACAGC 57.388 39.130 0.00 0.00 0.00 4.40
3556 4123 9.322773 AGATATGTGTGTGATCTCAAAATACAG 57.677 33.333 0.00 0.00 0.00 2.74
3557 4124 9.101655 CAGATATGTGTGTGATCTCAAAATACA 57.898 33.333 0.00 3.97 0.00 2.29
3558 4125 8.066595 GCAGATATGTGTGTGATCTCAAAATAC 58.933 37.037 1.37 0.00 0.00 1.89
3559 4126 7.769970 TGCAGATATGTGTGTGATCTCAAAATA 59.230 33.333 1.37 0.00 0.00 1.40
3560 4127 6.600427 TGCAGATATGTGTGTGATCTCAAAAT 59.400 34.615 1.37 0.00 0.00 1.82
3561 4128 5.939296 TGCAGATATGTGTGTGATCTCAAAA 59.061 36.000 1.37 0.00 0.00 2.44
3562 4129 5.490159 TGCAGATATGTGTGTGATCTCAAA 58.510 37.500 1.37 0.00 0.00 2.69
3563 4130 5.088680 TGCAGATATGTGTGTGATCTCAA 57.911 39.130 1.37 0.00 0.00 3.02
3564 4131 4.403432 TCTGCAGATATGTGTGTGATCTCA 59.597 41.667 13.74 0.00 0.00 3.27
3565 4132 4.941657 TCTGCAGATATGTGTGTGATCTC 58.058 43.478 13.74 0.00 0.00 2.75
3566 4133 5.349061 TTCTGCAGATATGTGTGTGATCT 57.651 39.130 19.04 0.00 0.00 2.75
3567 4134 5.583854 AGTTTCTGCAGATATGTGTGTGATC 59.416 40.000 19.04 0.00 0.00 2.92
3568 4135 5.353400 CAGTTTCTGCAGATATGTGTGTGAT 59.647 40.000 19.04 0.00 0.00 3.06
3569 4136 4.692155 CAGTTTCTGCAGATATGTGTGTGA 59.308 41.667 19.04 0.00 0.00 3.58
3570 4137 4.142752 CCAGTTTCTGCAGATATGTGTGTG 60.143 45.833 19.04 6.77 0.00 3.82
3571 4138 4.005650 CCAGTTTCTGCAGATATGTGTGT 58.994 43.478 19.04 0.00 0.00 3.72
3572 4139 3.181503 GCCAGTTTCTGCAGATATGTGTG 60.182 47.826 19.04 9.30 0.00 3.82
3573 4140 3.012518 GCCAGTTTCTGCAGATATGTGT 58.987 45.455 19.04 0.00 0.00 3.72
3574 4141 3.011818 TGCCAGTTTCTGCAGATATGTG 58.988 45.455 19.04 13.71 0.00 3.21
3575 4142 3.354948 TGCCAGTTTCTGCAGATATGT 57.645 42.857 19.04 1.62 0.00 2.29
3576 4143 4.337274 TCATTGCCAGTTTCTGCAGATATG 59.663 41.667 19.04 15.68 0.00 1.78
3577 4144 4.529897 TCATTGCCAGTTTCTGCAGATAT 58.470 39.130 19.04 3.45 0.00 1.63
3578 4145 3.954200 TCATTGCCAGTTTCTGCAGATA 58.046 40.909 19.04 10.46 0.00 1.98
3579 4146 2.799017 TCATTGCCAGTTTCTGCAGAT 58.201 42.857 19.04 0.00 0.00 2.90
3580 4147 2.275134 TCATTGCCAGTTTCTGCAGA 57.725 45.000 13.74 13.74 0.00 4.26
3581 4148 3.374220 TTTCATTGCCAGTTTCTGCAG 57.626 42.857 7.63 7.63 0.00 4.41
3582 4149 3.655486 CATTTCATTGCCAGTTTCTGCA 58.345 40.909 0.00 0.00 0.00 4.41
3583 4150 2.414138 GCATTTCATTGCCAGTTTCTGC 59.586 45.455 0.00 0.00 36.60 4.26
3584 4151 3.678072 CAGCATTTCATTGCCAGTTTCTG 59.322 43.478 0.00 0.00 43.83 3.02
3585 4152 3.575256 TCAGCATTTCATTGCCAGTTTCT 59.425 39.130 0.00 0.00 43.83 2.52
3586 4153 3.916761 TCAGCATTTCATTGCCAGTTTC 58.083 40.909 0.00 0.00 43.83 2.78
3587 4154 4.339872 TTCAGCATTTCATTGCCAGTTT 57.660 36.364 0.00 0.00 43.83 2.66
3588 4155 4.060205 GTTTCAGCATTTCATTGCCAGTT 58.940 39.130 0.00 0.00 43.83 3.16
3589 4156 3.069872 TGTTTCAGCATTTCATTGCCAGT 59.930 39.130 0.00 0.00 43.83 4.00
3590 4157 3.655486 TGTTTCAGCATTTCATTGCCAG 58.345 40.909 0.00 0.00 43.83 4.85
3591 4158 3.747854 TGTTTCAGCATTTCATTGCCA 57.252 38.095 0.00 0.00 43.83 4.92
3592 4159 3.181514 GCATGTTTCAGCATTTCATTGCC 60.182 43.478 0.00 0.00 43.83 4.52
3593 4160 3.682858 AGCATGTTTCAGCATTTCATTGC 59.317 39.130 0.00 0.00 43.09 3.56
3594 4161 5.518847 CCTAGCATGTTTCAGCATTTCATTG 59.481 40.000 0.00 0.00 0.00 2.82
3595 4162 5.419788 TCCTAGCATGTTTCAGCATTTCATT 59.580 36.000 0.00 0.00 0.00 2.57
3596 4163 4.951715 TCCTAGCATGTTTCAGCATTTCAT 59.048 37.500 0.00 0.00 0.00 2.57
3597 4164 4.334552 TCCTAGCATGTTTCAGCATTTCA 58.665 39.130 0.00 0.00 0.00 2.69
3598 4165 4.970662 TCCTAGCATGTTTCAGCATTTC 57.029 40.909 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.