Multiple sequence alignment - TraesCS6D01G053700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G053700 chr6D 100.000 2641 0 0 1 2641 25707627 25704987 0.000000e+00 4878.0
1 TraesCS6D01G053700 chr4B 95.831 1583 25 10 631 2197 9072093 9073650 0.000000e+00 2519.0
2 TraesCS6D01G053700 chr4B 96.522 345 4 3 177 515 9071332 9071674 4.930000e-157 564.0
3 TraesCS6D01G053700 chr4B 95.349 86 4 0 21 106 9070947 9071032 1.270000e-28 137.0
4 TraesCS6D01G053700 chr4B 98.485 66 1 0 114 179 9071244 9071309 1.660000e-22 117.0
5 TraesCS6D01G053700 chr6B 86.344 454 57 5 2174 2626 629583283 629582834 8.490000e-135 490.0
6 TraesCS6D01G053700 chr7D 84.498 458 64 6 2174 2626 592974175 592974630 1.870000e-121 446.0
7 TraesCS6D01G053700 chr1B 85.849 424 52 7 2172 2588 621407305 621406883 6.710000e-121 444.0
8 TraesCS6D01G053700 chr1B 84.925 398 58 2 2233 2628 642674077 642674474 4.090000e-108 401.0
9 TraesCS6D01G053700 chr5D 83.878 459 68 3 2172 2628 335792856 335793310 1.450000e-117 433.0
10 TraesCS6D01G053700 chr5D 85.526 76 11 0 21 96 133245435 133245510 2.180000e-11 80.5
11 TraesCS6D01G053700 chr1D 83.772 456 65 8 2172 2622 342192259 342191808 8.740000e-115 424.0
12 TraesCS6D01G053700 chr3B 84.248 419 61 5 2174 2588 616084966 616084549 1.140000e-108 403.0
13 TraesCS6D01G053700 chr5B 82.479 468 70 7 2172 2629 643452527 643452992 1.470000e-107 399.0
14 TraesCS6D01G053700 chr1A 81.481 459 82 2 2172 2628 512662314 512662771 8.930000e-100 374.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G053700 chr6D 25704987 25707627 2640 True 4878.00 4878 100.00000 1 2641 1 chr6D.!!$R1 2640
1 TraesCS6D01G053700 chr4B 9070947 9073650 2703 False 834.25 2519 96.54675 21 2197 4 chr4B.!!$F1 2176

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
582 818 0.03601 AAGATTCCTGGCTGGACACG 60.036 55.0 13.2 0.0 46.14 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2205 2760 0.030773 GCGTCCGTGAGCATATGAGA 59.969 55.0 6.97 0.0 0.0 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.014647 AGCAATATTAGATAGGTACGGGACA 58.985 40.000 0.00 0.00 0.00 4.02
49 50 1.452110 CAATTGATCCCGAGCACACA 58.548 50.000 0.00 0.00 0.00 3.72
82 83 0.241749 TGTTCCGCTCGATACGTGTT 59.758 50.000 0.00 0.00 0.00 3.32
100 101 4.956778 CGTGTTTGTGATTCGTTTTTCGTA 59.043 37.500 0.00 0.00 40.80 3.43
108 109 3.529634 TTCGTTTTTCGTAGCACATGG 57.470 42.857 0.00 0.00 40.80 3.66
109 110 2.756829 TCGTTTTTCGTAGCACATGGA 58.243 42.857 0.00 0.00 40.80 3.41
110 111 2.734606 TCGTTTTTCGTAGCACATGGAG 59.265 45.455 0.00 0.00 40.80 3.86
111 112 2.159707 CGTTTTTCGTAGCACATGGAGG 60.160 50.000 0.00 0.00 34.52 4.30
112 113 1.448985 TTTTCGTAGCACATGGAGGC 58.551 50.000 0.00 0.00 0.00 4.70
310 540 1.262950 TGCTTGTTCGTCCGTGATTTG 59.737 47.619 0.00 0.00 0.00 2.32
311 541 1.399727 GCTTGTTCGTCCGTGATTTGG 60.400 52.381 0.00 0.00 0.00 3.28
352 588 4.196193 TCTAACTTTTGGGTGTCTGTGTG 58.804 43.478 0.00 0.00 0.00 3.82
353 589 2.507407 ACTTTTGGGTGTCTGTGTGT 57.493 45.000 0.00 0.00 0.00 3.72
373 609 1.071228 TGTGTGCAGCAGAACTCTCAT 59.929 47.619 0.00 0.00 0.00 2.90
397 633 5.007682 AGAGGAAGTAACTGACAGAGAGAC 58.992 45.833 10.08 1.39 0.00 3.36
515 751 4.154347 GCGGAGAGGCAGGGAGTG 62.154 72.222 0.00 0.00 0.00 3.51
525 761 3.393472 CAGGGAGTGCAGATAAGGC 57.607 57.895 0.00 0.00 0.00 4.35
526 762 0.531532 CAGGGAGTGCAGATAAGGCG 60.532 60.000 0.00 0.00 0.00 5.52
527 763 1.889573 GGGAGTGCAGATAAGGCGC 60.890 63.158 0.00 0.00 41.91 6.53
528 764 1.153369 GGAGTGCAGATAAGGCGCA 60.153 57.895 10.83 0.00 43.94 6.09
529 765 1.156645 GGAGTGCAGATAAGGCGCAG 61.157 60.000 10.83 0.00 43.94 5.18
530 766 1.153289 AGTGCAGATAAGGCGCAGG 60.153 57.895 10.83 0.00 43.94 4.85
531 767 1.450312 GTGCAGATAAGGCGCAGGT 60.450 57.895 10.83 0.00 41.27 4.00
532 768 0.179084 GTGCAGATAAGGCGCAGGTA 60.179 55.000 10.83 0.00 41.27 3.08
533 769 0.758734 TGCAGATAAGGCGCAGGTAT 59.241 50.000 10.83 2.71 0.00 2.73
534 770 1.270305 TGCAGATAAGGCGCAGGTATC 60.270 52.381 10.83 12.53 0.00 2.24
535 771 1.001406 GCAGATAAGGCGCAGGTATCT 59.999 52.381 10.83 14.63 35.44 1.98
536 772 2.681706 CAGATAAGGCGCAGGTATCTG 58.318 52.381 26.28 26.28 42.73 2.90
537 773 2.598565 AGATAAGGCGCAGGTATCTGA 58.401 47.619 19.82 0.00 43.49 3.27
538 774 2.965831 AGATAAGGCGCAGGTATCTGAA 59.034 45.455 19.82 0.00 43.49 3.02
539 775 2.596904 TAAGGCGCAGGTATCTGAAC 57.403 50.000 10.83 0.00 43.49 3.18
540 776 0.613260 AAGGCGCAGGTATCTGAACA 59.387 50.000 10.83 0.00 43.49 3.18
541 777 0.108138 AGGCGCAGGTATCTGAACAC 60.108 55.000 10.83 0.00 43.49 3.32
542 778 0.108138 GGCGCAGGTATCTGAACACT 60.108 55.000 10.83 0.00 43.49 3.55
543 779 1.281899 GCGCAGGTATCTGAACACTC 58.718 55.000 7.33 0.00 43.49 3.51
544 780 1.927895 CGCAGGTATCTGAACACTCC 58.072 55.000 7.33 0.00 43.49 3.85
545 781 1.204704 CGCAGGTATCTGAACACTCCA 59.795 52.381 7.33 0.00 43.49 3.86
546 782 2.159043 CGCAGGTATCTGAACACTCCAT 60.159 50.000 7.33 0.00 43.49 3.41
547 783 3.068165 CGCAGGTATCTGAACACTCCATA 59.932 47.826 7.33 0.00 43.49 2.74
548 784 4.626042 GCAGGTATCTGAACACTCCATAG 58.374 47.826 7.33 0.00 43.49 2.23
549 785 4.342378 GCAGGTATCTGAACACTCCATAGA 59.658 45.833 7.33 0.00 43.49 1.98
550 786 5.508825 GCAGGTATCTGAACACTCCATAGAG 60.509 48.000 7.33 0.00 43.49 2.43
551 787 4.586841 AGGTATCTGAACACTCCATAGAGC 59.413 45.833 0.00 0.00 44.65 4.09
552 788 4.342378 GGTATCTGAACACTCCATAGAGCA 59.658 45.833 0.00 0.00 44.65 4.26
553 789 3.876274 TCTGAACACTCCATAGAGCAC 57.124 47.619 0.00 0.00 44.65 4.40
554 790 3.165071 TCTGAACACTCCATAGAGCACA 58.835 45.455 0.00 0.00 44.65 4.57
555 791 3.771479 TCTGAACACTCCATAGAGCACAT 59.229 43.478 0.00 0.00 44.65 3.21
556 792 4.223700 TCTGAACACTCCATAGAGCACATT 59.776 41.667 0.00 0.00 44.65 2.71
557 793 4.256110 TGAACACTCCATAGAGCACATTG 58.744 43.478 0.00 0.00 44.65 2.82
558 794 4.020307 TGAACACTCCATAGAGCACATTGA 60.020 41.667 0.00 0.00 44.65 2.57
559 795 4.767578 ACACTCCATAGAGCACATTGAT 57.232 40.909 0.00 0.00 44.65 2.57
560 796 4.701765 ACACTCCATAGAGCACATTGATC 58.298 43.478 0.00 0.00 44.65 2.92
561 797 4.063689 CACTCCATAGAGCACATTGATCC 58.936 47.826 0.00 0.00 44.65 3.36
562 798 3.713248 ACTCCATAGAGCACATTGATCCA 59.287 43.478 0.00 0.00 44.65 3.41
563 799 4.164796 ACTCCATAGAGCACATTGATCCAA 59.835 41.667 0.00 0.00 44.65 3.53
564 800 5.114764 TCCATAGAGCACATTGATCCAAA 57.885 39.130 0.00 0.00 32.25 3.28
565 801 5.128205 TCCATAGAGCACATTGATCCAAAG 58.872 41.667 0.00 0.00 32.25 2.77
566 802 5.104402 TCCATAGAGCACATTGATCCAAAGA 60.104 40.000 0.00 0.00 32.25 2.52
567 803 5.768662 CCATAGAGCACATTGATCCAAAGAT 59.231 40.000 0.00 0.00 32.25 2.40
568 804 6.264744 CCATAGAGCACATTGATCCAAAGATT 59.735 38.462 0.00 0.00 32.25 2.40
569 805 5.831702 AGAGCACATTGATCCAAAGATTC 57.168 39.130 0.00 0.00 32.25 2.52
570 806 4.643784 AGAGCACATTGATCCAAAGATTCC 59.356 41.667 0.00 0.00 32.25 3.01
571 807 4.607239 AGCACATTGATCCAAAGATTCCT 58.393 39.130 0.00 0.00 30.90 3.36
572 808 4.401519 AGCACATTGATCCAAAGATTCCTG 59.598 41.667 0.00 0.00 30.90 3.86
573 809 4.441079 GCACATTGATCCAAAGATTCCTGG 60.441 45.833 0.00 0.00 30.90 4.45
574 810 3.703052 ACATTGATCCAAAGATTCCTGGC 59.297 43.478 0.00 0.00 30.90 4.85
575 811 3.744940 TTGATCCAAAGATTCCTGGCT 57.255 42.857 0.00 0.00 30.90 4.75
576 812 3.008835 TGATCCAAAGATTCCTGGCTG 57.991 47.619 0.00 0.00 30.90 4.85
577 813 2.305009 GATCCAAAGATTCCTGGCTGG 58.695 52.381 3.65 3.65 30.90 4.85
578 814 1.371467 TCCAAAGATTCCTGGCTGGA 58.629 50.000 9.30 9.30 44.51 3.86
579 815 1.004745 TCCAAAGATTCCTGGCTGGAC 59.995 52.381 13.20 2.73 46.14 4.02
580 816 1.272092 CCAAAGATTCCTGGCTGGACA 60.272 52.381 13.20 5.30 46.14 4.02
581 817 1.815003 CAAAGATTCCTGGCTGGACAC 59.185 52.381 13.20 9.85 46.14 3.67
582 818 0.036010 AAGATTCCTGGCTGGACACG 60.036 55.000 13.20 0.00 46.14 4.49
583 819 0.904865 AGATTCCTGGCTGGACACGA 60.905 55.000 13.20 0.00 46.14 4.35
584 820 0.036388 GATTCCTGGCTGGACACGAA 60.036 55.000 13.20 0.00 46.14 3.85
585 821 0.036010 ATTCCTGGCTGGACACGAAG 60.036 55.000 13.20 0.00 46.14 3.79
586 822 2.046892 CCTGGCTGGACACGAAGG 60.047 66.667 4.05 0.00 38.35 3.46
587 823 2.743718 CTGGCTGGACACGAAGGT 59.256 61.111 0.00 0.00 0.00 3.50
588 824 1.541310 CCTGGCTGGACACGAAGGTA 61.541 60.000 4.05 0.00 38.35 3.08
589 825 0.537188 CTGGCTGGACACGAAGGTAT 59.463 55.000 0.00 0.00 0.00 2.73
590 826 0.981183 TGGCTGGACACGAAGGTATT 59.019 50.000 0.00 0.00 0.00 1.89
591 827 1.066430 TGGCTGGACACGAAGGTATTC 60.066 52.381 0.00 0.00 0.00 1.75
592 828 1.066430 GGCTGGACACGAAGGTATTCA 60.066 52.381 0.00 0.00 34.94 2.57
593 829 2.271800 GCTGGACACGAAGGTATTCAG 58.728 52.381 0.00 0.00 34.94 3.02
594 830 2.353803 GCTGGACACGAAGGTATTCAGT 60.354 50.000 0.00 0.00 34.94 3.41
595 831 3.864921 GCTGGACACGAAGGTATTCAGTT 60.865 47.826 0.00 0.00 34.94 3.16
596 832 4.315803 CTGGACACGAAGGTATTCAGTTT 58.684 43.478 0.00 0.00 34.94 2.66
597 833 5.471556 TGGACACGAAGGTATTCAGTTTA 57.528 39.130 0.00 0.00 34.94 2.01
598 834 5.475719 TGGACACGAAGGTATTCAGTTTAG 58.524 41.667 0.00 0.00 34.94 1.85
599 835 5.011329 TGGACACGAAGGTATTCAGTTTAGT 59.989 40.000 0.00 0.00 34.94 2.24
600 836 5.575995 GGACACGAAGGTATTCAGTTTAGTC 59.424 44.000 0.00 0.00 34.94 2.59
601 837 5.476614 ACACGAAGGTATTCAGTTTAGTCC 58.523 41.667 0.00 0.00 34.94 3.85
602 838 4.868734 CACGAAGGTATTCAGTTTAGTCCC 59.131 45.833 0.00 0.00 34.94 4.46
603 839 4.081254 ACGAAGGTATTCAGTTTAGTCCCC 60.081 45.833 0.00 0.00 34.94 4.81
604 840 4.682589 CGAAGGTATTCAGTTTAGTCCCCC 60.683 50.000 0.00 0.00 34.94 5.40
622 858 2.273776 CCCCCACACACACACACA 59.726 61.111 0.00 0.00 0.00 3.72
623 859 2.118404 CCCCCACACACACACACAC 61.118 63.158 0.00 0.00 0.00 3.82
624 860 1.377856 CCCCACACACACACACACA 60.378 57.895 0.00 0.00 0.00 3.72
625 861 1.653094 CCCCACACACACACACACAC 61.653 60.000 0.00 0.00 0.00 3.82
626 862 0.676466 CCCACACACACACACACACT 60.676 55.000 0.00 0.00 0.00 3.55
627 863 1.164411 CCACACACACACACACACTT 58.836 50.000 0.00 0.00 0.00 3.16
628 864 1.539388 CCACACACACACACACACTTT 59.461 47.619 0.00 0.00 0.00 2.66
629 865 2.583739 CACACACACACACACACTTTG 58.416 47.619 0.00 0.00 0.00 2.77
695 1243 9.737427 CTACAGATTCAGTCTACGATAATTGTT 57.263 33.333 0.00 0.00 34.69 2.83
886 1437 3.787805 GCGACACTTCTTGATGATGCATG 60.788 47.826 2.46 0.00 0.00 4.06
1024 1575 1.001641 GGTCAGGATTGGTGCTGCT 60.002 57.895 0.00 0.00 42.89 4.24
1025 1576 0.253044 GGTCAGGATTGGTGCTGCTA 59.747 55.000 0.00 0.00 42.89 3.49
1027 1578 0.253044 TCAGGATTGGTGCTGCTACC 59.747 55.000 12.44 12.44 42.89 3.18
1032 1583 2.749682 TGGTGCTGCTACCAGGTG 59.250 61.111 16.47 0.00 45.46 4.00
1033 1584 1.841103 TGGTGCTGCTACCAGGTGA 60.841 57.895 16.47 0.00 45.46 4.02
1034 1585 1.200760 TGGTGCTGCTACCAGGTGAT 61.201 55.000 16.47 0.00 45.46 3.06
1035 1586 0.035056 GGTGCTGCTACCAGGTGATT 60.035 55.000 0.76 0.00 40.54 2.57
1036 1587 1.614317 GGTGCTGCTACCAGGTGATTT 60.614 52.381 0.76 0.00 40.54 2.17
1037 1588 2.355716 GGTGCTGCTACCAGGTGATTTA 60.356 50.000 0.76 0.00 40.54 1.40
1038 1589 3.343617 GTGCTGCTACCAGGTGATTTAA 58.656 45.455 0.76 0.00 39.54 1.52
1039 1590 3.127030 GTGCTGCTACCAGGTGATTTAAC 59.873 47.826 0.76 0.00 39.54 2.01
1040 1591 3.244735 TGCTGCTACCAGGTGATTTAACA 60.245 43.478 0.76 0.00 39.54 2.41
1041 1592 3.756434 GCTGCTACCAGGTGATTTAACAA 59.244 43.478 0.76 0.00 39.54 2.83
1042 1593 4.217550 GCTGCTACCAGGTGATTTAACAAA 59.782 41.667 0.76 0.00 39.54 2.83
1043 1594 5.278758 GCTGCTACCAGGTGATTTAACAAAA 60.279 40.000 0.76 0.00 39.54 2.44
1044 1595 6.079424 TGCTACCAGGTGATTTAACAAAAC 57.921 37.500 0.76 0.00 0.00 2.43
1045 1596 5.830991 TGCTACCAGGTGATTTAACAAAACT 59.169 36.000 0.76 0.00 0.00 2.66
1046 1597 6.999272 TGCTACCAGGTGATTTAACAAAACTA 59.001 34.615 0.76 0.00 0.00 2.24
1047 1598 7.502895 TGCTACCAGGTGATTTAACAAAACTAA 59.497 33.333 0.76 0.00 0.00 2.24
1048 1599 8.354426 GCTACCAGGTGATTTAACAAAACTAAA 58.646 33.333 0.76 0.00 0.00 1.85
1228 1779 4.269603 GTGATGATGCGTGCATATCCTATC 59.730 45.833 7.42 7.65 36.70 2.08
1319 1870 1.774639 TCGCTCGTTCAACAGTTACC 58.225 50.000 0.00 0.00 0.00 2.85
1393 1944 2.376518 AGAATCAAGAAGCTGGACCCAA 59.623 45.455 0.00 0.00 0.00 4.12
1415 1966 3.583054 TAGTGCGCTGGGTACTACT 57.417 52.632 16.47 3.13 42.06 2.57
1416 1967 1.100510 TAGTGCGCTGGGTACTACTG 58.899 55.000 16.47 0.00 42.06 2.74
1638 2193 2.026915 TGCTGGCACACTGACTATCATT 60.027 45.455 0.00 0.00 0.00 2.57
1822 2377 7.933396 TCATGATGTACCATCATTTGCTAAAG 58.067 34.615 15.21 4.43 36.69 1.85
1874 2429 6.593382 ACTTTCACTTGATCTAGTTCTGATGC 59.407 38.462 7.11 0.00 0.00 3.91
1880 2435 2.961526 TCTAGTTCTGATGCGGTTCC 57.038 50.000 0.00 0.00 0.00 3.62
1913 2468 1.769702 TGATGATGGGGATGCGGGA 60.770 57.895 0.00 0.00 0.00 5.14
2031 2586 9.545105 TTTTCTTGTTCTTGCAATATTTGATGT 57.455 25.926 0.00 0.00 0.00 3.06
2053 2608 5.009911 TGTTGATACATAAGCATCATTGGCC 59.990 40.000 0.00 0.00 31.50 5.36
2085 2640 3.387699 TCCTACGGATGAAGATGATGCAA 59.612 43.478 0.00 0.00 0.00 4.08
2108 2663 3.956314 GTACGGGTGGGGTGGCAA 61.956 66.667 0.00 0.00 0.00 4.52
2109 2664 2.936584 TACGGGTGGGGTGGCAAT 60.937 61.111 0.00 0.00 0.00 3.56
2113 2668 4.702274 GGTGGGGTGGCAATGGCT 62.702 66.667 8.59 0.00 40.87 4.75
2114 2669 3.070576 GTGGGGTGGCAATGGCTC 61.071 66.667 8.59 4.12 40.87 4.70
2115 2670 3.588511 TGGGGTGGCAATGGCTCA 61.589 61.111 8.59 0.00 40.87 4.26
2116 2671 2.757099 GGGGTGGCAATGGCTCAG 60.757 66.667 8.59 0.00 40.87 3.35
2117 2672 3.455469 GGGTGGCAATGGCTCAGC 61.455 66.667 8.59 0.00 40.87 4.26
2118 2673 2.362120 GGTGGCAATGGCTCAGCT 60.362 61.111 8.59 0.00 40.87 4.24
2119 2674 2.707849 GGTGGCAATGGCTCAGCTG 61.708 63.158 7.63 7.63 40.87 4.24
2120 2675 2.361992 TGGCAATGGCTCAGCTGG 60.362 61.111 15.13 5.82 40.87 4.85
2121 2676 3.145551 GGCAATGGCTCAGCTGGG 61.146 66.667 15.13 12.70 40.87 4.45
2122 2677 2.044650 GCAATGGCTCAGCTGGGA 60.045 61.111 20.53 0.00 36.96 4.37
2152 2707 0.398239 CAGCAGATCTGGAGGAGGGA 60.398 60.000 23.89 0.00 39.15 4.20
2193 2748 1.281899 GAGCATCTACAACCAGACGC 58.718 55.000 0.00 0.00 34.02 5.19
2197 2752 1.204704 CATCTACAACCAGACGCCTCA 59.795 52.381 0.00 0.00 0.00 3.86
2198 2753 1.334160 TCTACAACCAGACGCCTCAA 58.666 50.000 0.00 0.00 0.00 3.02
2199 2754 1.689813 TCTACAACCAGACGCCTCAAA 59.310 47.619 0.00 0.00 0.00 2.69
2200 2755 1.798813 CTACAACCAGACGCCTCAAAC 59.201 52.381 0.00 0.00 0.00 2.93
2201 2756 0.818040 ACAACCAGACGCCTCAAACC 60.818 55.000 0.00 0.00 0.00 3.27
2202 2757 0.817634 CAACCAGACGCCTCAAACCA 60.818 55.000 0.00 0.00 0.00 3.67
2203 2758 0.110486 AACCAGACGCCTCAAACCAT 59.890 50.000 0.00 0.00 0.00 3.55
2204 2759 0.321653 ACCAGACGCCTCAAACCATC 60.322 55.000 0.00 0.00 0.00 3.51
2205 2760 0.036010 CCAGACGCCTCAAACCATCT 60.036 55.000 0.00 0.00 0.00 2.90
2206 2761 1.363744 CAGACGCCTCAAACCATCTC 58.636 55.000 0.00 0.00 0.00 2.75
2207 2762 1.066573 CAGACGCCTCAAACCATCTCT 60.067 52.381 0.00 0.00 0.00 3.10
2208 2763 1.205893 AGACGCCTCAAACCATCTCTC 59.794 52.381 0.00 0.00 0.00 3.20
2209 2764 0.976641 ACGCCTCAAACCATCTCTCA 59.023 50.000 0.00 0.00 0.00 3.27
2210 2765 1.556911 ACGCCTCAAACCATCTCTCAT 59.443 47.619 0.00 0.00 0.00 2.90
2211 2766 2.766263 ACGCCTCAAACCATCTCTCATA 59.234 45.455 0.00 0.00 0.00 2.15
2212 2767 3.389329 ACGCCTCAAACCATCTCTCATAT 59.611 43.478 0.00 0.00 0.00 1.78
2213 2768 3.744942 CGCCTCAAACCATCTCTCATATG 59.255 47.826 0.00 0.00 0.00 1.78
2214 2769 3.501445 GCCTCAAACCATCTCTCATATGC 59.499 47.826 0.00 0.00 0.00 3.14
2215 2770 4.746089 GCCTCAAACCATCTCTCATATGCT 60.746 45.833 0.00 0.00 0.00 3.79
2216 2771 4.996122 CCTCAAACCATCTCTCATATGCTC 59.004 45.833 0.00 0.00 0.00 4.26
2217 2772 5.454329 CCTCAAACCATCTCTCATATGCTCA 60.454 44.000 0.00 0.00 0.00 4.26
2218 2773 5.363101 TCAAACCATCTCTCATATGCTCAC 58.637 41.667 0.00 0.00 0.00 3.51
2219 2774 3.657015 ACCATCTCTCATATGCTCACG 57.343 47.619 0.00 0.00 0.00 4.35
2220 2775 2.298446 ACCATCTCTCATATGCTCACGG 59.702 50.000 0.00 0.00 0.00 4.94
2221 2776 2.560105 CCATCTCTCATATGCTCACGGA 59.440 50.000 0.00 0.00 0.00 4.69
2222 2777 3.573598 CATCTCTCATATGCTCACGGAC 58.426 50.000 0.00 0.00 0.00 4.79
2223 2778 1.604278 TCTCTCATATGCTCACGGACG 59.396 52.381 0.00 0.00 0.00 4.79
2224 2779 0.030773 TCTCATATGCTCACGGACGC 59.969 55.000 0.00 0.00 0.00 5.19
2225 2780 1.271446 CTCATATGCTCACGGACGCG 61.271 60.000 3.53 3.53 0.00 6.01
2226 2781 2.658593 ATATGCTCACGGACGCGC 60.659 61.111 5.73 0.00 0.00 6.86
2227 2782 4.865761 TATGCTCACGGACGCGCC 62.866 66.667 5.73 7.90 0.00 6.53
2236 2791 3.499737 GGACGCGCCTGGTCATTG 61.500 66.667 5.73 0.00 36.12 2.82
2237 2792 2.434185 GACGCGCCTGGTCATTGA 60.434 61.111 5.73 0.00 34.56 2.57
2238 2793 2.740714 GACGCGCCTGGTCATTGAC 61.741 63.158 5.73 8.34 34.56 3.18
2239 2794 2.434884 CGCGCCTGGTCATTGACT 60.435 61.111 16.02 0.00 32.47 3.41
2240 2795 1.153647 CGCGCCTGGTCATTGACTA 60.154 57.895 16.02 9.61 32.47 2.59
2241 2796 1.148157 CGCGCCTGGTCATTGACTAG 61.148 60.000 20.02 20.02 40.16 2.57
2242 2797 0.175760 GCGCCTGGTCATTGACTAGA 59.824 55.000 26.40 7.44 42.49 2.43
2243 2798 1.927895 CGCCTGGTCATTGACTAGAC 58.072 55.000 26.40 16.92 42.49 2.59
2244 2799 1.204704 CGCCTGGTCATTGACTAGACA 59.795 52.381 26.40 11.39 42.49 3.41
2245 2800 2.736719 CGCCTGGTCATTGACTAGACAG 60.737 54.545 26.40 18.54 42.49 3.51
2246 2801 2.419297 GCCTGGTCATTGACTAGACAGG 60.419 54.545 26.40 25.25 42.49 4.00
2247 2802 3.099905 CCTGGTCATTGACTAGACAGGA 58.900 50.000 26.40 0.00 42.49 3.86
2248 2803 3.131933 CCTGGTCATTGACTAGACAGGAG 59.868 52.174 26.40 9.00 42.49 3.69
2249 2804 4.019858 CTGGTCATTGACTAGACAGGAGA 58.980 47.826 21.84 0.00 42.49 3.71
2250 2805 4.019858 TGGTCATTGACTAGACAGGAGAG 58.980 47.826 16.02 0.00 36.50 3.20
2251 2806 4.263949 TGGTCATTGACTAGACAGGAGAGA 60.264 45.833 16.02 0.00 36.50 3.10
2252 2807 4.338118 GGTCATTGACTAGACAGGAGAGAG 59.662 50.000 16.02 0.00 36.50 3.20
2253 2808 5.189928 GTCATTGACTAGACAGGAGAGAGA 58.810 45.833 9.59 0.00 34.93 3.10
2254 2809 5.650266 GTCATTGACTAGACAGGAGAGAGAA 59.350 44.000 9.59 0.00 34.93 2.87
2255 2810 5.885352 TCATTGACTAGACAGGAGAGAGAAG 59.115 44.000 0.00 0.00 0.00 2.85
2256 2811 4.229304 TGACTAGACAGGAGAGAGAAGG 57.771 50.000 0.00 0.00 0.00 3.46
2257 2812 3.847184 TGACTAGACAGGAGAGAGAAGGA 59.153 47.826 0.00 0.00 0.00 3.36
2258 2813 4.289934 TGACTAGACAGGAGAGAGAAGGAA 59.710 45.833 0.00 0.00 0.00 3.36
2259 2814 5.222151 TGACTAGACAGGAGAGAGAAGGAAA 60.222 44.000 0.00 0.00 0.00 3.13
2260 2815 5.646215 ACTAGACAGGAGAGAGAAGGAAAA 58.354 41.667 0.00 0.00 0.00 2.29
2261 2816 6.078664 ACTAGACAGGAGAGAGAAGGAAAAA 58.921 40.000 0.00 0.00 0.00 1.94
2277 2832 1.334160 AAAAATGACCCAACCGGACC 58.666 50.000 9.46 0.00 34.64 4.46
2278 2833 0.541063 AAAATGACCCAACCGGACCC 60.541 55.000 9.46 0.00 34.64 4.46
2279 2834 1.721093 AAATGACCCAACCGGACCCA 61.721 55.000 9.46 0.00 34.64 4.51
2280 2835 1.506028 AATGACCCAACCGGACCCAT 61.506 55.000 9.46 0.00 34.64 4.00
2281 2836 1.921869 ATGACCCAACCGGACCCATC 61.922 60.000 9.46 0.00 34.64 3.51
2282 2837 2.530661 ACCCAACCGGACCCATCA 60.531 61.111 9.46 0.00 34.64 3.07
2283 2838 1.921869 GACCCAACCGGACCCATCAT 61.922 60.000 9.46 0.00 34.64 2.45
2284 2839 0.622154 ACCCAACCGGACCCATCATA 60.622 55.000 9.46 0.00 34.64 2.15
2285 2840 0.771127 CCCAACCGGACCCATCATAT 59.229 55.000 9.46 0.00 0.00 1.78
2286 2841 1.271379 CCCAACCGGACCCATCATATC 60.271 57.143 9.46 0.00 0.00 1.63
2287 2842 1.699634 CCAACCGGACCCATCATATCT 59.300 52.381 9.46 0.00 0.00 1.98
2288 2843 2.106511 CCAACCGGACCCATCATATCTT 59.893 50.000 9.46 0.00 0.00 2.40
2289 2844 3.403038 CAACCGGACCCATCATATCTTC 58.597 50.000 9.46 0.00 0.00 2.87
2290 2845 1.978580 ACCGGACCCATCATATCTTCC 59.021 52.381 9.46 0.00 0.00 3.46
2291 2846 1.279271 CCGGACCCATCATATCTTCCC 59.721 57.143 0.00 0.00 0.00 3.97
2292 2847 2.260822 CGGACCCATCATATCTTCCCT 58.739 52.381 0.00 0.00 0.00 4.20
2293 2848 3.441101 CGGACCCATCATATCTTCCCTA 58.559 50.000 0.00 0.00 0.00 3.53
2294 2849 4.033709 CGGACCCATCATATCTTCCCTAT 58.966 47.826 0.00 0.00 0.00 2.57
2295 2850 5.208890 CGGACCCATCATATCTTCCCTATA 58.791 45.833 0.00 0.00 0.00 1.31
2296 2851 5.841237 CGGACCCATCATATCTTCCCTATAT 59.159 44.000 0.00 0.00 0.00 0.86
2297 2852 6.239430 CGGACCCATCATATCTTCCCTATATG 60.239 46.154 0.00 0.00 38.24 1.78
2298 2853 6.617371 GGACCCATCATATCTTCCCTATATGT 59.383 42.308 0.00 0.00 38.13 2.29
2299 2854 7.202047 GGACCCATCATATCTTCCCTATATGTC 60.202 44.444 0.00 0.00 38.13 3.06
2300 2855 6.617371 ACCCATCATATCTTCCCTATATGTCC 59.383 42.308 0.00 0.00 38.13 4.02
2301 2856 6.239430 CCCATCATATCTTCCCTATATGTCCG 60.239 46.154 0.00 0.00 38.13 4.79
2302 2857 6.239430 CCATCATATCTTCCCTATATGTCCGG 60.239 46.154 0.00 0.00 38.13 5.14
2303 2858 5.208890 TCATATCTTCCCTATATGTCCGGG 58.791 45.833 0.00 0.00 38.13 5.73
2304 2859 1.640917 TCTTCCCTATATGTCCGGGC 58.359 55.000 0.00 0.00 37.89 6.13
2305 2860 1.149288 TCTTCCCTATATGTCCGGGCT 59.851 52.381 7.97 0.00 37.89 5.19
2306 2861 1.276421 CTTCCCTATATGTCCGGGCTG 59.724 57.143 7.97 0.00 37.89 4.85
2307 2862 0.190069 TCCCTATATGTCCGGGCTGT 59.810 55.000 7.97 0.00 37.89 4.40
2308 2863 0.608640 CCCTATATGTCCGGGCTGTC 59.391 60.000 7.97 0.00 0.00 3.51
2309 2864 0.608640 CCTATATGTCCGGGCTGTCC 59.391 60.000 7.97 0.00 0.00 4.02
2318 2873 2.351276 GGGCTGTCCGTGAACCAT 59.649 61.111 0.00 0.00 0.00 3.55
2319 2874 1.745489 GGGCTGTCCGTGAACCATC 60.745 63.158 0.00 0.00 0.00 3.51
2320 2875 1.003839 GGCTGTCCGTGAACCATCA 60.004 57.895 0.00 0.00 0.00 3.07
2321 2876 0.392998 GGCTGTCCGTGAACCATCAT 60.393 55.000 0.00 0.00 38.01 2.45
2322 2877 1.134521 GGCTGTCCGTGAACCATCATA 60.135 52.381 0.00 0.00 38.01 2.15
2323 2878 2.485479 GGCTGTCCGTGAACCATCATAT 60.485 50.000 0.00 0.00 38.01 1.78
2324 2879 2.802816 GCTGTCCGTGAACCATCATATC 59.197 50.000 0.00 0.00 38.01 1.63
2325 2880 3.393800 CTGTCCGTGAACCATCATATCC 58.606 50.000 0.00 0.00 38.01 2.59
2326 2881 2.769095 TGTCCGTGAACCATCATATCCA 59.231 45.455 0.00 0.00 38.01 3.41
2327 2882 3.390967 TGTCCGTGAACCATCATATCCAT 59.609 43.478 0.00 0.00 38.01 3.41
2328 2883 3.997021 GTCCGTGAACCATCATATCCATC 59.003 47.826 0.00 0.00 38.01 3.51
2329 2884 3.903714 TCCGTGAACCATCATATCCATCT 59.096 43.478 0.00 0.00 38.01 2.90
2330 2885 4.021104 TCCGTGAACCATCATATCCATCTC 60.021 45.833 0.00 0.00 38.01 2.75
2331 2886 4.262592 CCGTGAACCATCATATCCATCTCA 60.263 45.833 0.00 0.00 38.01 3.27
2332 2887 5.299949 CGTGAACCATCATATCCATCTCAA 58.700 41.667 0.00 0.00 38.01 3.02
2333 2888 5.759763 CGTGAACCATCATATCCATCTCAAA 59.240 40.000 0.00 0.00 38.01 2.69
2334 2889 6.429078 CGTGAACCATCATATCCATCTCAAAT 59.571 38.462 0.00 0.00 38.01 2.32
2335 2890 7.603784 CGTGAACCATCATATCCATCTCAAATA 59.396 37.037 0.00 0.00 38.01 1.40
2336 2891 9.458727 GTGAACCATCATATCCATCTCAAATAT 57.541 33.333 0.00 0.00 38.01 1.28
2337 2892 9.457436 TGAACCATCATATCCATCTCAAATATG 57.543 33.333 0.00 0.00 35.58 1.78
2338 2893 8.818622 AACCATCATATCCATCTCAAATATGG 57.181 34.615 0.00 0.00 44.51 2.74
2339 2894 7.351952 ACCATCATATCCATCTCAAATATGGG 58.648 38.462 0.00 0.00 43.52 4.00
2340 2895 6.776116 CCATCATATCCATCTCAAATATGGGG 59.224 42.308 2.45 0.00 43.52 4.96
2341 2896 7.367095 CCATCATATCCATCTCAAATATGGGGA 60.367 40.741 2.45 0.00 43.52 4.81
2342 2897 7.204243 TCATATCCATCTCAAATATGGGGAG 57.796 40.000 2.45 0.00 43.52 4.30
2343 2898 4.942363 ATCCATCTCAAATATGGGGAGG 57.058 45.455 2.45 0.00 43.52 4.30
2344 2899 3.953352 TCCATCTCAAATATGGGGAGGA 58.047 45.455 2.45 0.00 43.52 3.71
2345 2900 4.516283 TCCATCTCAAATATGGGGAGGAT 58.484 43.478 2.45 0.00 43.52 3.24
2346 2901 5.675077 TCCATCTCAAATATGGGGAGGATA 58.325 41.667 2.45 0.00 43.52 2.59
2347 2902 6.282576 TCCATCTCAAATATGGGGAGGATAT 58.717 40.000 2.45 0.00 43.52 1.63
2348 2903 7.438417 TCCATCTCAAATATGGGGAGGATATA 58.562 38.462 2.45 0.00 43.52 0.86
2349 2904 7.911655 TCCATCTCAAATATGGGGAGGATATAA 59.088 37.037 2.45 0.00 43.52 0.98
2350 2905 8.216423 CCATCTCAAATATGGGGAGGATATAAG 58.784 40.741 0.00 0.00 40.27 1.73
2351 2906 7.755666 TCTCAAATATGGGGAGGATATAAGG 57.244 40.000 0.00 0.00 0.00 2.69
2352 2907 6.678411 TCTCAAATATGGGGAGGATATAAGGG 59.322 42.308 0.00 0.00 0.00 3.95
2353 2908 5.193728 TCAAATATGGGGAGGATATAAGGGC 59.806 44.000 0.00 0.00 0.00 5.19
2354 2909 4.668787 ATATGGGGAGGATATAAGGGCT 57.331 45.455 0.00 0.00 0.00 5.19
2355 2910 2.344093 TGGGGAGGATATAAGGGCTC 57.656 55.000 0.00 0.00 0.00 4.70
2356 2911 1.196012 GGGGAGGATATAAGGGCTCG 58.804 60.000 0.00 0.00 0.00 5.03
2357 2912 0.537653 GGGAGGATATAAGGGCTCGC 59.462 60.000 0.00 0.00 0.00 5.03
2358 2913 0.537653 GGAGGATATAAGGGCTCGCC 59.462 60.000 0.00 0.00 0.00 5.54
2359 2914 0.173708 GAGGATATAAGGGCTCGCCG 59.826 60.000 1.24 0.00 36.85 6.46
2360 2915 0.251653 AGGATATAAGGGCTCGCCGA 60.252 55.000 1.24 0.00 36.85 5.54
2361 2916 0.108756 GGATATAAGGGCTCGCCGAC 60.109 60.000 1.24 0.00 36.85 4.79
2362 2917 0.601558 GATATAAGGGCTCGCCGACA 59.398 55.000 1.24 0.00 36.85 4.35
2363 2918 0.317479 ATATAAGGGCTCGCCGACAC 59.683 55.000 1.24 0.00 36.85 3.67
2364 2919 2.067091 TATAAGGGCTCGCCGACACG 62.067 60.000 1.24 0.00 36.85 4.49
2393 2948 3.550431 CGGGGCGATCCTCCACAT 61.550 66.667 2.29 0.00 35.33 3.21
2394 2949 2.207229 CGGGGCGATCCTCCACATA 61.207 63.158 2.29 0.00 35.33 2.29
2395 2950 1.674057 GGGGCGATCCTCCACATAG 59.326 63.158 0.00 0.00 35.33 2.23
2396 2951 1.674057 GGGCGATCCTCCACATAGG 59.326 63.158 0.00 0.00 38.06 2.57
2405 2960 2.189521 CCACATAGGACGTGGCCC 59.810 66.667 0.00 0.00 46.94 5.80
2406 2961 2.189521 CACATAGGACGTGGCCCC 59.810 66.667 0.00 0.00 0.00 5.80
2407 2962 2.285069 ACATAGGACGTGGCCCCA 60.285 61.111 0.00 0.00 0.00 4.96
2408 2963 1.692749 ACATAGGACGTGGCCCCAT 60.693 57.895 0.00 0.00 0.00 4.00
2409 2964 1.071471 CATAGGACGTGGCCCCATC 59.929 63.158 0.00 0.00 0.00 3.51
2410 2965 2.147387 ATAGGACGTGGCCCCATCC 61.147 63.158 0.00 3.92 0.00 3.51
2419 2974 4.271016 GCCCCATCCCGGACCATC 62.271 72.222 0.73 0.00 36.56 3.51
2420 2975 2.448542 CCCCATCCCGGACCATCT 60.449 66.667 0.73 0.00 36.56 2.90
2421 2976 2.078665 CCCCATCCCGGACCATCTT 61.079 63.158 0.73 0.00 36.56 2.40
2422 2977 1.645402 CCCCATCCCGGACCATCTTT 61.645 60.000 0.73 0.00 36.56 2.52
2423 2978 0.258774 CCCATCCCGGACCATCTTTT 59.741 55.000 0.73 0.00 36.56 2.27
2424 2979 1.680338 CCATCCCGGACCATCTTTTC 58.320 55.000 0.73 0.00 36.56 2.29
2425 2980 1.212935 CCATCCCGGACCATCTTTTCT 59.787 52.381 0.73 0.00 36.56 2.52
2426 2981 2.565841 CATCCCGGACCATCTTTTCTC 58.434 52.381 0.73 0.00 0.00 2.87
2427 2982 1.952621 TCCCGGACCATCTTTTCTCT 58.047 50.000 0.73 0.00 0.00 3.10
2428 2983 2.266279 TCCCGGACCATCTTTTCTCTT 58.734 47.619 0.73 0.00 0.00 2.85
2429 2984 2.642807 TCCCGGACCATCTTTTCTCTTT 59.357 45.455 0.73 0.00 0.00 2.52
2430 2985 3.073946 TCCCGGACCATCTTTTCTCTTTT 59.926 43.478 0.73 0.00 0.00 2.27
2431 2986 3.826729 CCCGGACCATCTTTTCTCTTTTT 59.173 43.478 0.73 0.00 0.00 1.94
2432 2987 5.007682 CCCGGACCATCTTTTCTCTTTTTA 58.992 41.667 0.73 0.00 0.00 1.52
2433 2988 5.652452 CCCGGACCATCTTTTCTCTTTTTAT 59.348 40.000 0.73 0.00 0.00 1.40
2434 2989 6.152831 CCCGGACCATCTTTTCTCTTTTTATT 59.847 38.462 0.73 0.00 0.00 1.40
2435 2990 7.309805 CCCGGACCATCTTTTCTCTTTTTATTT 60.310 37.037 0.73 0.00 0.00 1.40
2436 2991 8.736244 CCGGACCATCTTTTCTCTTTTTATTTA 58.264 33.333 0.00 0.00 0.00 1.40
2461 3016 8.599624 ATTCTTTTCTCTCTCTCTCTTCATCT 57.400 34.615 0.00 0.00 0.00 2.90
2462 3017 8.421249 TTCTTTTCTCTCTCTCTCTTCATCTT 57.579 34.615 0.00 0.00 0.00 2.40
2463 3018 8.055279 TCTTTTCTCTCTCTCTCTTCATCTTC 57.945 38.462 0.00 0.00 0.00 2.87
2464 3019 7.669304 TCTTTTCTCTCTCTCTCTTCATCTTCA 59.331 37.037 0.00 0.00 0.00 3.02
2465 3020 6.757897 TTCTCTCTCTCTCTTCATCTTCAC 57.242 41.667 0.00 0.00 0.00 3.18
2466 3021 5.192927 TCTCTCTCTCTCTTCATCTTCACC 58.807 45.833 0.00 0.00 0.00 4.02
2467 3022 4.928263 TCTCTCTCTCTTCATCTTCACCA 58.072 43.478 0.00 0.00 0.00 4.17
2468 3023 5.328565 TCTCTCTCTCTTCATCTTCACCAA 58.671 41.667 0.00 0.00 0.00 3.67
2469 3024 5.957168 TCTCTCTCTCTTCATCTTCACCAAT 59.043 40.000 0.00 0.00 0.00 3.16
2470 3025 6.096705 TCTCTCTCTCTTCATCTTCACCAATC 59.903 42.308 0.00 0.00 0.00 2.67
2471 3026 5.718607 TCTCTCTCTTCATCTTCACCAATCA 59.281 40.000 0.00 0.00 0.00 2.57
2472 3027 5.728471 TCTCTCTTCATCTTCACCAATCAC 58.272 41.667 0.00 0.00 0.00 3.06
2473 3028 4.498241 TCTCTTCATCTTCACCAATCACG 58.502 43.478 0.00 0.00 0.00 4.35
2474 3029 4.021104 TCTCTTCATCTTCACCAATCACGT 60.021 41.667 0.00 0.00 0.00 4.49
2475 3030 3.996363 TCTTCATCTTCACCAATCACGTG 59.004 43.478 9.94 9.94 0.00 4.49
2476 3031 2.076100 TCATCTTCACCAATCACGTGC 58.924 47.619 11.67 0.00 0.00 5.34
2477 3032 1.805943 CATCTTCACCAATCACGTGCA 59.194 47.619 11.67 0.00 0.00 4.57
2478 3033 1.960417 TCTTCACCAATCACGTGCAA 58.040 45.000 11.67 0.00 0.00 4.08
2479 3034 1.872952 TCTTCACCAATCACGTGCAAG 59.127 47.619 11.67 0.00 0.00 4.01
2480 3035 1.603802 CTTCACCAATCACGTGCAAGT 59.396 47.619 11.67 0.00 0.00 3.16
2481 3036 0.943673 TCACCAATCACGTGCAAGTG 59.056 50.000 24.56 24.56 43.11 3.16
2486 3041 2.279851 TCACGTGCAAGTGACCGG 60.280 61.111 28.20 0.00 45.18 5.28
2487 3042 2.279851 CACGTGCAAGTGACCGGA 60.280 61.111 26.06 0.00 44.43 5.14
2488 3043 2.279918 ACGTGCAAGTGACCGGAC 60.280 61.111 9.46 1.07 0.00 4.79
2489 3044 2.279851 CGTGCAAGTGACCGGACA 60.280 61.111 9.46 5.04 0.00 4.02
2490 3045 1.667830 CGTGCAAGTGACCGGACAT 60.668 57.895 9.46 0.00 0.00 3.06
2491 3046 0.389296 CGTGCAAGTGACCGGACATA 60.389 55.000 9.46 0.00 0.00 2.29
2492 3047 1.739035 CGTGCAAGTGACCGGACATAT 60.739 52.381 9.46 0.00 0.00 1.78
2493 3048 1.665679 GTGCAAGTGACCGGACATATG 59.334 52.381 9.46 12.83 0.00 1.78
2494 3049 1.552792 TGCAAGTGACCGGACATATGA 59.447 47.619 20.15 7.56 0.00 2.15
2495 3050 2.205074 GCAAGTGACCGGACATATGAG 58.795 52.381 20.15 7.83 0.00 2.90
2496 3051 2.826428 CAAGTGACCGGACATATGAGG 58.174 52.381 9.46 11.80 0.00 3.86
2497 3052 2.430694 CAAGTGACCGGACATATGAGGA 59.569 50.000 9.46 0.00 0.00 3.71
2498 3053 2.747177 AGTGACCGGACATATGAGGAA 58.253 47.619 9.46 2.05 0.00 3.36
2499 3054 2.695666 AGTGACCGGACATATGAGGAAG 59.304 50.000 9.46 0.00 0.00 3.46
2500 3055 2.693591 GTGACCGGACATATGAGGAAGA 59.306 50.000 9.46 0.00 0.00 2.87
2501 3056 3.132289 GTGACCGGACATATGAGGAAGAA 59.868 47.826 9.46 0.00 0.00 2.52
2502 3057 3.772572 TGACCGGACATATGAGGAAGAAA 59.227 43.478 9.46 0.00 0.00 2.52
2503 3058 4.224147 TGACCGGACATATGAGGAAGAAAA 59.776 41.667 9.46 0.00 0.00 2.29
2504 3059 5.104527 TGACCGGACATATGAGGAAGAAAAT 60.105 40.000 9.46 0.00 0.00 1.82
2505 3060 6.099125 TGACCGGACATATGAGGAAGAAAATA 59.901 38.462 9.46 0.00 0.00 1.40
2506 3061 6.895782 ACCGGACATATGAGGAAGAAAATAA 58.104 36.000 9.46 0.00 0.00 1.40
2507 3062 6.992715 ACCGGACATATGAGGAAGAAAATAAG 59.007 38.462 9.46 0.00 0.00 1.73
2508 3063 6.428159 CCGGACATATGAGGAAGAAAATAAGG 59.572 42.308 10.38 0.00 0.00 2.69
2509 3064 7.217200 CGGACATATGAGGAAGAAAATAAGGA 58.783 38.462 10.38 0.00 0.00 3.36
2510 3065 7.880195 CGGACATATGAGGAAGAAAATAAGGAT 59.120 37.037 10.38 0.00 0.00 3.24
2511 3066 9.579932 GGACATATGAGGAAGAAAATAAGGATT 57.420 33.333 10.38 0.00 0.00 3.01
2513 3068 9.927081 ACATATGAGGAAGAAAATAAGGATTGT 57.073 29.630 10.38 0.00 0.00 2.71
2515 3070 7.651027 ATGAGGAAGAAAATAAGGATTGTGG 57.349 36.000 0.00 0.00 0.00 4.17
2516 3071 6.552008 TGAGGAAGAAAATAAGGATTGTGGT 58.448 36.000 0.00 0.00 0.00 4.16
2517 3072 7.010160 TGAGGAAGAAAATAAGGATTGTGGTT 58.990 34.615 0.00 0.00 0.00 3.67
2518 3073 7.039784 TGAGGAAGAAAATAAGGATTGTGGTTG 60.040 37.037 0.00 0.00 0.00 3.77
2519 3074 5.869344 GGAAGAAAATAAGGATTGTGGTTGC 59.131 40.000 0.00 0.00 0.00 4.17
2520 3075 5.059404 AGAAAATAAGGATTGTGGTTGCG 57.941 39.130 0.00 0.00 0.00 4.85
2521 3076 2.939460 AATAAGGATTGTGGTTGCGC 57.061 45.000 0.00 0.00 0.00 6.09
2522 3077 0.732571 ATAAGGATTGTGGTTGCGCG 59.267 50.000 0.00 0.00 0.00 6.86
2523 3078 1.302383 TAAGGATTGTGGTTGCGCGG 61.302 55.000 8.83 0.00 0.00 6.46
2524 3079 3.053291 GGATTGTGGTTGCGCGGA 61.053 61.111 8.83 0.00 0.00 5.54
2525 3080 2.406616 GGATTGTGGTTGCGCGGAT 61.407 57.895 8.83 0.00 0.00 4.18
2526 3081 1.226379 GATTGTGGTTGCGCGGATG 60.226 57.895 8.83 0.00 0.00 3.51
2527 3082 2.597117 GATTGTGGTTGCGCGGATGG 62.597 60.000 8.83 0.00 0.00 3.51
2528 3083 3.834013 TTGTGGTTGCGCGGATGGA 62.834 57.895 8.83 0.00 0.00 3.41
2529 3084 2.824041 GTGGTTGCGCGGATGGAT 60.824 61.111 8.83 0.00 0.00 3.41
2530 3085 1.522806 GTGGTTGCGCGGATGGATA 60.523 57.895 8.83 0.00 0.00 2.59
2531 3086 1.092921 GTGGTTGCGCGGATGGATAA 61.093 55.000 8.83 0.00 0.00 1.75
2532 3087 0.393132 TGGTTGCGCGGATGGATAAA 60.393 50.000 8.83 0.00 0.00 1.40
2533 3088 0.951558 GGTTGCGCGGATGGATAAAT 59.048 50.000 8.83 0.00 0.00 1.40
2534 3089 1.336755 GGTTGCGCGGATGGATAAATT 59.663 47.619 8.83 0.00 0.00 1.82
2535 3090 2.550606 GGTTGCGCGGATGGATAAATTA 59.449 45.455 8.83 0.00 0.00 1.40
2536 3091 3.364964 GGTTGCGCGGATGGATAAATTAG 60.365 47.826 8.83 0.00 0.00 1.73
2537 3092 3.394674 TGCGCGGATGGATAAATTAGA 57.605 42.857 8.83 0.00 0.00 2.10
2538 3093 3.937814 TGCGCGGATGGATAAATTAGAT 58.062 40.909 8.83 0.00 0.00 1.98
2539 3094 5.079689 TGCGCGGATGGATAAATTAGATA 57.920 39.130 8.83 0.00 0.00 1.98
2540 3095 5.670485 TGCGCGGATGGATAAATTAGATAT 58.330 37.500 8.83 0.00 0.00 1.63
2541 3096 5.753438 TGCGCGGATGGATAAATTAGATATC 59.247 40.000 8.83 0.00 0.00 1.63
2542 3097 5.753438 GCGCGGATGGATAAATTAGATATCA 59.247 40.000 8.83 0.00 32.52 2.15
2543 3098 6.257849 GCGCGGATGGATAAATTAGATATCAA 59.742 38.462 8.83 0.00 32.52 2.57
2544 3099 7.201609 GCGCGGATGGATAAATTAGATATCAAA 60.202 37.037 8.83 0.00 32.52 2.69
2545 3100 8.664798 CGCGGATGGATAAATTAGATATCAAAA 58.335 33.333 5.32 0.00 32.52 2.44
2564 3119 2.049433 GGACACGTCCGGTCAGTG 60.049 66.667 19.47 19.47 40.36 3.66
2565 3120 2.558286 GGACACGTCCGGTCAGTGA 61.558 63.158 24.98 0.00 40.36 3.41
2566 3121 1.371389 GACACGTCCGGTCAGTGAC 60.371 63.158 24.98 15.24 39.04 3.67
2590 3145 3.202001 CGTCCGCGGGCATTTGAT 61.202 61.111 31.65 0.00 0.00 2.57
2591 3146 2.715624 GTCCGCGGGCATTTGATC 59.284 61.111 27.96 0.86 0.00 2.92
2592 3147 2.894879 TCCGCGGGCATTTGATCG 60.895 61.111 27.83 0.00 0.00 3.69
2593 3148 3.952675 CCGCGGGCATTTGATCGG 61.953 66.667 20.10 0.00 0.00 4.18
2594 3149 3.202001 CGCGGGCATTTGATCGGT 61.202 61.111 0.00 0.00 0.00 4.69
2595 3150 2.715624 GCGGGCATTTGATCGGTC 59.284 61.111 0.00 0.00 0.00 4.79
2596 3151 3.014036 CGGGCATTTGATCGGTCG 58.986 61.111 0.00 0.00 0.00 4.79
2597 3152 1.520564 CGGGCATTTGATCGGTCGA 60.521 57.895 0.00 0.00 0.00 4.20
2598 3153 1.087202 CGGGCATTTGATCGGTCGAA 61.087 55.000 0.00 0.00 32.40 3.71
2599 3154 1.308998 GGGCATTTGATCGGTCGAAT 58.691 50.000 5.25 5.25 38.70 3.34
2600 3155 1.676006 GGGCATTTGATCGGTCGAATT 59.324 47.619 8.51 0.00 36.51 2.17
2601 3156 2.875933 GGGCATTTGATCGGTCGAATTA 59.124 45.455 8.51 0.00 36.51 1.40
2602 3157 3.058914 GGGCATTTGATCGGTCGAATTAG 60.059 47.826 8.51 0.31 36.51 1.73
2603 3158 3.807622 GGCATTTGATCGGTCGAATTAGA 59.192 43.478 8.51 0.00 36.51 2.10
2604 3159 4.084328 GGCATTTGATCGGTCGAATTAGAG 60.084 45.833 8.51 0.00 36.51 2.43
2605 3160 4.084328 GCATTTGATCGGTCGAATTAGAGG 60.084 45.833 8.51 0.00 36.51 3.69
2606 3161 4.730949 TTTGATCGGTCGAATTAGAGGT 57.269 40.909 0.00 0.00 0.00 3.85
2607 3162 5.840243 TTTGATCGGTCGAATTAGAGGTA 57.160 39.130 0.00 0.00 0.00 3.08
2608 3163 4.825546 TGATCGGTCGAATTAGAGGTAC 57.174 45.455 0.00 0.00 0.00 3.34
2609 3164 4.201657 TGATCGGTCGAATTAGAGGTACA 58.798 43.478 0.00 0.00 0.00 2.90
2610 3165 4.825634 TGATCGGTCGAATTAGAGGTACAT 59.174 41.667 0.00 0.00 0.00 2.29
2611 3166 4.563337 TCGGTCGAATTAGAGGTACATG 57.437 45.455 0.00 0.00 0.00 3.21
2612 3167 4.201657 TCGGTCGAATTAGAGGTACATGA 58.798 43.478 0.00 0.00 0.00 3.07
2613 3168 4.036027 TCGGTCGAATTAGAGGTACATGAC 59.964 45.833 0.00 0.00 0.00 3.06
2614 3169 4.036498 CGGTCGAATTAGAGGTACATGACT 59.964 45.833 0.00 0.00 0.00 3.41
2615 3170 5.282510 GGTCGAATTAGAGGTACATGACTG 58.717 45.833 0.00 0.00 0.00 3.51
2616 3171 5.067413 GGTCGAATTAGAGGTACATGACTGA 59.933 44.000 0.00 0.00 0.00 3.41
2617 3172 6.405508 GGTCGAATTAGAGGTACATGACTGAA 60.406 42.308 0.00 0.00 0.00 3.02
2618 3173 6.693545 GTCGAATTAGAGGTACATGACTGAAG 59.306 42.308 0.00 0.00 0.00 3.02
2619 3174 6.602009 TCGAATTAGAGGTACATGACTGAAGA 59.398 38.462 0.00 0.00 0.00 2.87
2620 3175 7.285629 TCGAATTAGAGGTACATGACTGAAGAT 59.714 37.037 0.00 0.00 0.00 2.40
2621 3176 7.380870 CGAATTAGAGGTACATGACTGAAGATG 59.619 40.741 0.00 0.00 0.00 2.90
2622 3177 4.399004 AGAGGTACATGACTGAAGATGC 57.601 45.455 0.00 0.00 0.00 3.91
2623 3178 4.029520 AGAGGTACATGACTGAAGATGCT 58.970 43.478 0.00 0.00 0.00 3.79
2624 3179 4.099266 AGAGGTACATGACTGAAGATGCTC 59.901 45.833 0.00 0.00 0.00 4.26
2625 3180 4.029520 AGGTACATGACTGAAGATGCTCT 58.970 43.478 0.00 0.00 0.00 4.09
2626 3181 4.469227 AGGTACATGACTGAAGATGCTCTT 59.531 41.667 0.00 0.00 39.87 2.85
2627 3182 5.658634 AGGTACATGACTGAAGATGCTCTTA 59.341 40.000 0.00 0.00 36.73 2.10
2628 3183 5.982516 GGTACATGACTGAAGATGCTCTTAG 59.017 44.000 0.00 1.79 36.73 2.18
2629 3184 5.929058 ACATGACTGAAGATGCTCTTAGA 57.071 39.130 0.00 0.00 36.73 2.10
2630 3185 5.904941 ACATGACTGAAGATGCTCTTAGAG 58.095 41.667 4.63 4.63 36.73 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.014647 TGTCCCGTACCTATCTAATATTGCT 58.985 40.000 0.00 0.00 0.00 3.91
1 2 6.098017 GTGTCCCGTACCTATCTAATATTGC 58.902 44.000 0.00 0.00 0.00 3.56
2 3 6.320171 CGTGTCCCGTACCTATCTAATATTG 58.680 44.000 0.00 0.00 0.00 1.90
3 4 5.416952 CCGTGTCCCGTACCTATCTAATATT 59.583 44.000 0.00 0.00 33.66 1.28
4 5 4.946157 CCGTGTCCCGTACCTATCTAATAT 59.054 45.833 0.00 0.00 33.66 1.28
5 6 4.041567 TCCGTGTCCCGTACCTATCTAATA 59.958 45.833 0.00 0.00 33.66 0.98
6 7 3.152341 CCGTGTCCCGTACCTATCTAAT 58.848 50.000 0.00 0.00 33.66 1.73
7 8 2.172505 TCCGTGTCCCGTACCTATCTAA 59.827 50.000 0.00 0.00 33.66 2.10
8 9 1.768275 TCCGTGTCCCGTACCTATCTA 59.232 52.381 0.00 0.00 33.66 1.98
9 10 0.548031 TCCGTGTCCCGTACCTATCT 59.452 55.000 0.00 0.00 33.66 1.98
10 11 0.950116 CTCCGTGTCCCGTACCTATC 59.050 60.000 0.00 0.00 33.66 2.08
11 12 1.105759 GCTCCGTGTCCCGTACCTAT 61.106 60.000 0.00 0.00 33.66 2.57
12 13 1.750399 GCTCCGTGTCCCGTACCTA 60.750 63.158 0.00 0.00 33.66 3.08
13 14 3.066814 GCTCCGTGTCCCGTACCT 61.067 66.667 0.00 0.00 33.66 3.08
14 15 2.234913 ATTGCTCCGTGTCCCGTACC 62.235 60.000 0.00 0.00 33.66 3.34
15 16 0.390735 AATTGCTCCGTGTCCCGTAC 60.391 55.000 0.00 0.00 33.66 3.67
16 17 0.390603 CAATTGCTCCGTGTCCCGTA 60.391 55.000 0.00 0.00 33.66 4.02
17 18 1.671054 CAATTGCTCCGTGTCCCGT 60.671 57.895 0.00 0.00 33.66 5.28
18 19 0.744414 ATCAATTGCTCCGTGTCCCG 60.744 55.000 0.00 0.00 0.00 5.14
19 20 1.017387 GATCAATTGCTCCGTGTCCC 58.983 55.000 0.00 0.00 0.00 4.46
24 25 0.179073 CTCGGGATCAATTGCTCCGT 60.179 55.000 19.43 0.00 41.27 4.69
49 50 1.405821 CGGAACAGATTACGAGAGCCT 59.594 52.381 0.00 0.00 45.76 4.58
82 83 4.034163 TGTGCTACGAAAAACGAATCACAA 59.966 37.500 0.00 0.00 45.77 3.33
100 101 1.226542 CTCCATGCCTCCATGTGCT 59.773 57.895 3.34 0.00 45.90 4.40
106 107 1.614525 AGACAGCTCCATGCCTCCA 60.615 57.895 0.00 0.00 44.23 3.86
108 109 4.852962 GAGACAGCTCCATGCCTC 57.147 61.111 0.00 0.00 44.23 4.70
126 331 4.880537 CGCAGCCGGCAGAGGTAG 62.881 72.222 31.54 9.90 45.17 3.18
190 420 2.776536 CCTCAAGAGATCCAGGTTCCAT 59.223 50.000 0.00 0.00 0.00 3.41
310 540 5.167303 AGATCTTCAGTAACTCCAAACCC 57.833 43.478 0.00 0.00 0.00 4.11
311 541 7.387643 AGTTAGATCTTCAGTAACTCCAAACC 58.612 38.462 0.00 0.00 32.67 3.27
352 588 0.864455 GAGAGTTCTGCTGCACACAC 59.136 55.000 0.00 0.00 0.00 3.82
353 589 0.465287 TGAGAGTTCTGCTGCACACA 59.535 50.000 0.00 0.00 0.00 3.72
373 609 6.174760 GTCTCTCTGTCAGTTACTTCCTCTA 58.825 44.000 0.00 0.00 0.00 2.43
397 633 4.864334 GGAGAGGCGCCATGGGTG 62.864 72.222 31.54 1.96 36.10 4.61
444 680 1.297456 GCACTCTCAGCTGGCACTTC 61.297 60.000 15.13 0.00 0.00 3.01
515 751 1.001406 AGATACCTGCGCCTTATCTGC 59.999 52.381 17.20 0.00 32.44 4.26
516 752 2.297315 TCAGATACCTGCGCCTTATCTG 59.703 50.000 27.85 27.85 45.71 2.90
517 753 2.598565 TCAGATACCTGCGCCTTATCT 58.401 47.619 4.18 10.65 40.20 1.98
518 754 3.060602 GTTCAGATACCTGCGCCTTATC 58.939 50.000 4.18 8.38 40.20 1.75
519 755 2.434336 TGTTCAGATACCTGCGCCTTAT 59.566 45.455 4.18 0.00 40.20 1.73
520 756 1.828595 TGTTCAGATACCTGCGCCTTA 59.171 47.619 4.18 0.00 40.20 2.69
521 757 0.613260 TGTTCAGATACCTGCGCCTT 59.387 50.000 4.18 0.00 40.20 4.35
522 758 0.108138 GTGTTCAGATACCTGCGCCT 60.108 55.000 4.18 0.00 40.20 5.52
523 759 0.108138 AGTGTTCAGATACCTGCGCC 60.108 55.000 4.18 0.00 40.20 6.53
524 760 1.281899 GAGTGTTCAGATACCTGCGC 58.718 55.000 0.00 0.00 40.20 6.09
525 761 1.204704 TGGAGTGTTCAGATACCTGCG 59.795 52.381 0.00 0.00 40.20 5.18
526 762 3.550437 ATGGAGTGTTCAGATACCTGC 57.450 47.619 0.00 0.00 40.20 4.85
527 763 5.508825 GCTCTATGGAGTGTTCAGATACCTG 60.509 48.000 8.00 0.00 41.38 4.00
528 764 4.586841 GCTCTATGGAGTGTTCAGATACCT 59.413 45.833 8.00 0.00 41.38 3.08
529 765 4.342378 TGCTCTATGGAGTGTTCAGATACC 59.658 45.833 8.00 0.00 41.38 2.73
530 766 5.163509 TGTGCTCTATGGAGTGTTCAGATAC 60.164 44.000 8.00 0.00 41.38 2.24
531 767 4.956075 TGTGCTCTATGGAGTGTTCAGATA 59.044 41.667 8.00 0.00 41.38 1.98
532 768 3.771479 TGTGCTCTATGGAGTGTTCAGAT 59.229 43.478 8.00 0.00 41.38 2.90
533 769 3.165071 TGTGCTCTATGGAGTGTTCAGA 58.835 45.455 8.00 0.00 41.38 3.27
534 770 3.599730 TGTGCTCTATGGAGTGTTCAG 57.400 47.619 8.00 0.00 41.38 3.02
535 771 4.020307 TCAATGTGCTCTATGGAGTGTTCA 60.020 41.667 8.00 3.14 41.38 3.18
536 772 4.507710 TCAATGTGCTCTATGGAGTGTTC 58.492 43.478 8.00 0.00 41.38 3.18
537 773 4.558226 TCAATGTGCTCTATGGAGTGTT 57.442 40.909 8.00 0.00 41.38 3.32
538 774 4.444022 GGATCAATGTGCTCTATGGAGTGT 60.444 45.833 8.00 0.00 41.38 3.55
539 775 4.063689 GGATCAATGTGCTCTATGGAGTG 58.936 47.826 8.00 0.00 41.38 3.51
540 776 3.713248 TGGATCAATGTGCTCTATGGAGT 59.287 43.478 8.00 0.00 41.38 3.85
541 777 4.347360 TGGATCAATGTGCTCTATGGAG 57.653 45.455 0.86 0.86 42.18 3.86
542 778 4.776435 TTGGATCAATGTGCTCTATGGA 57.224 40.909 0.00 0.00 0.00 3.41
543 779 5.128205 TCTTTGGATCAATGTGCTCTATGG 58.872 41.667 0.00 0.00 0.00 2.74
544 780 6.879276 ATCTTTGGATCAATGTGCTCTATG 57.121 37.500 0.00 0.00 0.00 2.23
545 781 6.489361 GGAATCTTTGGATCAATGTGCTCTAT 59.511 38.462 0.00 0.00 0.00 1.98
546 782 5.824624 GGAATCTTTGGATCAATGTGCTCTA 59.175 40.000 0.00 0.00 0.00 2.43
547 783 4.643784 GGAATCTTTGGATCAATGTGCTCT 59.356 41.667 0.00 0.00 0.00 4.09
548 784 4.643784 AGGAATCTTTGGATCAATGTGCTC 59.356 41.667 0.00 0.00 0.00 4.26
549 785 4.401519 CAGGAATCTTTGGATCAATGTGCT 59.598 41.667 0.00 0.00 0.00 4.40
550 786 4.441079 CCAGGAATCTTTGGATCAATGTGC 60.441 45.833 0.00 0.00 36.55 4.57
551 787 4.441079 GCCAGGAATCTTTGGATCAATGTG 60.441 45.833 8.18 0.00 36.55 3.21
552 788 3.703052 GCCAGGAATCTTTGGATCAATGT 59.297 43.478 8.18 0.00 36.55 2.71
553 789 3.958798 AGCCAGGAATCTTTGGATCAATG 59.041 43.478 8.18 0.00 36.55 2.82
554 790 3.958798 CAGCCAGGAATCTTTGGATCAAT 59.041 43.478 8.18 0.00 36.55 2.57
555 791 3.359033 CAGCCAGGAATCTTTGGATCAA 58.641 45.455 8.18 0.00 36.55 2.57
556 792 2.357465 CCAGCCAGGAATCTTTGGATCA 60.357 50.000 8.18 0.00 41.22 2.92
557 793 2.092212 TCCAGCCAGGAATCTTTGGATC 60.092 50.000 8.18 0.00 45.65 3.36
558 794 1.925255 TCCAGCCAGGAATCTTTGGAT 59.075 47.619 8.18 0.00 45.65 3.41
559 795 1.371467 TCCAGCCAGGAATCTTTGGA 58.629 50.000 8.18 0.00 45.65 3.53
560 796 3.985410 TCCAGCCAGGAATCTTTGG 57.015 52.632 0.00 1.00 45.65 3.28
568 804 2.583441 CCTTCGTGTCCAGCCAGGA 61.583 63.158 0.00 0.00 46.75 3.86
569 805 1.541310 TACCTTCGTGTCCAGCCAGG 61.541 60.000 0.00 0.00 39.47 4.45
570 806 0.537188 ATACCTTCGTGTCCAGCCAG 59.463 55.000 0.00 0.00 0.00 4.85
571 807 0.981183 AATACCTTCGTGTCCAGCCA 59.019 50.000 0.00 0.00 0.00 4.75
572 808 1.066430 TGAATACCTTCGTGTCCAGCC 60.066 52.381 0.00 0.00 33.86 4.85
573 809 2.271800 CTGAATACCTTCGTGTCCAGC 58.728 52.381 0.00 0.00 33.86 4.85
574 810 3.594603 ACTGAATACCTTCGTGTCCAG 57.405 47.619 0.00 0.00 33.86 3.86
575 811 4.345859 AAACTGAATACCTTCGTGTCCA 57.654 40.909 0.00 0.00 33.86 4.02
576 812 5.476614 ACTAAACTGAATACCTTCGTGTCC 58.523 41.667 0.00 0.00 33.86 4.02
577 813 5.575995 GGACTAAACTGAATACCTTCGTGTC 59.424 44.000 0.00 0.00 33.86 3.67
578 814 5.476614 GGACTAAACTGAATACCTTCGTGT 58.523 41.667 0.00 0.00 33.86 4.49
579 815 4.868734 GGGACTAAACTGAATACCTTCGTG 59.131 45.833 0.00 0.00 33.86 4.35
580 816 4.081254 GGGGACTAAACTGAATACCTTCGT 60.081 45.833 0.00 0.00 33.86 3.85
581 817 4.439968 GGGGACTAAACTGAATACCTTCG 58.560 47.826 0.00 0.00 33.86 3.79
582 818 4.778579 GGGGGACTAAACTGAATACCTTC 58.221 47.826 0.00 0.00 0.00 3.46
583 819 4.857130 GGGGGACTAAACTGAATACCTT 57.143 45.455 0.00 0.00 0.00 3.50
605 841 2.118404 GTGTGTGTGTGTGTGGGGG 61.118 63.158 0.00 0.00 0.00 5.40
606 842 1.377856 TGTGTGTGTGTGTGTGGGG 60.378 57.895 0.00 0.00 0.00 4.96
607 843 0.676466 AGTGTGTGTGTGTGTGTGGG 60.676 55.000 0.00 0.00 0.00 4.61
608 844 1.164411 AAGTGTGTGTGTGTGTGTGG 58.836 50.000 0.00 0.00 0.00 4.17
609 845 2.583739 CAAAGTGTGTGTGTGTGTGTG 58.416 47.619 0.00 0.00 0.00 3.82
610 846 1.539388 CCAAAGTGTGTGTGTGTGTGT 59.461 47.619 0.00 0.00 0.00 3.72
611 847 1.539388 ACCAAAGTGTGTGTGTGTGTG 59.461 47.619 0.00 0.00 0.00 3.82
612 848 1.904287 ACCAAAGTGTGTGTGTGTGT 58.096 45.000 0.00 0.00 0.00 3.72
613 849 3.063452 GTCTACCAAAGTGTGTGTGTGTG 59.937 47.826 0.00 0.00 0.00 3.82
614 850 3.267483 GTCTACCAAAGTGTGTGTGTGT 58.733 45.455 0.00 0.00 0.00 3.72
615 851 3.266636 TGTCTACCAAAGTGTGTGTGTG 58.733 45.455 0.00 0.00 0.00 3.82
616 852 3.620427 TGTCTACCAAAGTGTGTGTGT 57.380 42.857 0.00 0.00 0.00 3.72
617 853 4.126437 TCATGTCTACCAAAGTGTGTGTG 58.874 43.478 0.00 0.00 0.00 3.82
618 854 4.415881 TCATGTCTACCAAAGTGTGTGT 57.584 40.909 0.00 0.00 0.00 3.72
619 855 5.749596 TTTCATGTCTACCAAAGTGTGTG 57.250 39.130 0.00 0.00 0.00 3.82
620 856 6.293407 CGATTTTCATGTCTACCAAAGTGTGT 60.293 38.462 0.00 0.00 0.00 3.72
621 857 6.079763 CGATTTTCATGTCTACCAAAGTGTG 58.920 40.000 0.00 0.00 0.00 3.82
622 858 5.181245 CCGATTTTCATGTCTACCAAAGTGT 59.819 40.000 0.00 0.00 0.00 3.55
623 859 5.181245 ACCGATTTTCATGTCTACCAAAGTG 59.819 40.000 0.00 0.00 0.00 3.16
624 860 5.313712 ACCGATTTTCATGTCTACCAAAGT 58.686 37.500 0.00 0.00 0.00 2.66
625 861 5.880054 ACCGATTTTCATGTCTACCAAAG 57.120 39.130 0.00 0.00 0.00 2.77
626 862 5.563867 GCAACCGATTTTCATGTCTACCAAA 60.564 40.000 0.00 0.00 0.00 3.28
627 863 4.083003 GCAACCGATTTTCATGTCTACCAA 60.083 41.667 0.00 0.00 0.00 3.67
628 864 3.438781 GCAACCGATTTTCATGTCTACCA 59.561 43.478 0.00 0.00 0.00 3.25
629 865 3.181500 GGCAACCGATTTTCATGTCTACC 60.181 47.826 0.00 0.00 0.00 3.18
695 1243 8.646004 AGCATGAGAATCTAAGCTATCTTTACA 58.354 33.333 0.00 0.00 35.94 2.41
1228 1779 4.031028 GCTACTGCATCAAATAACTTGCG 58.969 43.478 0.00 0.00 37.92 4.85
1319 1870 5.007921 TGCATTCGGTGTATCATCTTCATTG 59.992 40.000 0.00 0.00 0.00 2.82
1367 1918 2.167281 TCCAGCTTCTTGATTCTCCGAG 59.833 50.000 0.00 0.00 0.00 4.63
1368 1919 2.093973 GTCCAGCTTCTTGATTCTCCGA 60.094 50.000 0.00 0.00 0.00 4.55
1393 1944 2.677524 TACCCAGCGCACTACCGT 60.678 61.111 11.47 0.00 0.00 4.83
1415 1966 3.213206 ACTTGGCTGTGATCTTGAACA 57.787 42.857 0.00 0.00 0.00 3.18
1416 1967 3.854784 GCAACTTGGCTGTGATCTTGAAC 60.855 47.826 0.00 0.00 0.00 3.18
1484 2039 1.665544 CTGTGACGACAGTTAGCGCG 61.666 60.000 0.00 0.00 44.15 6.86
1638 2193 7.661040 TGATAAGTTGATTCGCATCTATCTCA 58.339 34.615 0.00 0.00 0.00 3.27
1822 2377 8.894768 ATGAGGTACATGCTCTAAGTATTTTC 57.105 34.615 0.00 0.00 37.87 2.29
1874 2429 3.016736 AGGAATTGCATTGTAGGAACCG 58.983 45.455 0.00 0.00 0.00 4.44
1880 2435 5.278808 CCCATCATCAGGAATTGCATTGTAG 60.279 44.000 0.00 0.00 0.00 2.74
1913 2468 4.944317 TCATCTTCTGAGTCAGTGTCGTAT 59.056 41.667 19.53 4.17 32.61 3.06
2031 2586 4.216042 CGGCCAATGATGCTTATGTATCAA 59.784 41.667 12.28 0.00 45.65 2.57
2085 2640 1.848895 ACCCCACCCGTACCATGTT 60.849 57.895 0.00 0.00 0.00 2.71
2107 2662 0.769873 CCTATCCCAGCTGAGCCATT 59.230 55.000 17.39 0.00 0.00 3.16
2108 2663 0.104777 TCCTATCCCAGCTGAGCCAT 60.105 55.000 17.39 3.63 0.00 4.40
2109 2664 0.104777 ATCCTATCCCAGCTGAGCCA 60.105 55.000 17.39 0.00 0.00 4.75
2111 2666 0.321475 GCATCCTATCCCAGCTGAGC 60.321 60.000 17.39 0.00 0.00 4.26
2112 2667 1.002201 CTGCATCCTATCCCAGCTGAG 59.998 57.143 17.39 0.39 0.00 3.35
2113 2668 1.054231 CTGCATCCTATCCCAGCTGA 58.946 55.000 17.39 0.00 0.00 4.26
2114 2669 0.605860 GCTGCATCCTATCCCAGCTG 60.606 60.000 6.78 6.78 45.32 4.24
2115 2670 1.759881 GCTGCATCCTATCCCAGCT 59.240 57.895 4.38 0.00 45.32 4.24
2116 2671 4.393693 GCTGCATCCTATCCCAGC 57.606 61.111 0.00 0.00 43.10 4.85
2117 2672 0.605860 GCTGCTGCATCCTATCCCAG 60.606 60.000 11.11 0.00 39.41 4.45
2118 2673 1.347243 TGCTGCTGCATCCTATCCCA 61.347 55.000 14.93 0.00 45.31 4.37
2119 2674 1.453235 TGCTGCTGCATCCTATCCC 59.547 57.895 14.93 0.00 45.31 3.85
2152 2707 4.895889 TCTAATCGACTCCATCCACTGATT 59.104 41.667 0.00 0.00 0.00 2.57
2190 2745 0.976641 TGAGAGATGGTTTGAGGCGT 59.023 50.000 0.00 0.00 0.00 5.68
2193 2748 4.970711 AGCATATGAGAGATGGTTTGAGG 58.029 43.478 6.97 0.00 31.04 3.86
2197 2752 4.375272 CGTGAGCATATGAGAGATGGTTT 58.625 43.478 6.97 0.00 35.24 3.27
2198 2753 3.244009 CCGTGAGCATATGAGAGATGGTT 60.244 47.826 6.97 0.00 35.24 3.67
2199 2754 2.298446 CCGTGAGCATATGAGAGATGGT 59.702 50.000 6.97 0.00 37.72 3.55
2200 2755 2.560105 TCCGTGAGCATATGAGAGATGG 59.440 50.000 6.97 1.97 0.00 3.51
2201 2756 3.573598 GTCCGTGAGCATATGAGAGATG 58.426 50.000 6.97 0.00 0.00 2.90
2202 2757 2.227626 CGTCCGTGAGCATATGAGAGAT 59.772 50.000 6.97 0.00 0.00 2.75
2203 2758 1.604278 CGTCCGTGAGCATATGAGAGA 59.396 52.381 6.97 0.00 0.00 3.10
2204 2759 1.928152 GCGTCCGTGAGCATATGAGAG 60.928 57.143 6.97 0.00 0.00 3.20
2205 2760 0.030773 GCGTCCGTGAGCATATGAGA 59.969 55.000 6.97 0.00 0.00 3.27
2206 2761 1.271446 CGCGTCCGTGAGCATATGAG 61.271 60.000 6.97 0.00 0.00 2.90
2207 2762 1.299089 CGCGTCCGTGAGCATATGA 60.299 57.895 6.97 0.00 0.00 2.15
2208 2763 2.932083 GCGCGTCCGTGAGCATATG 61.932 63.158 8.43 0.00 36.67 1.78
2209 2764 2.658593 GCGCGTCCGTGAGCATAT 60.659 61.111 8.43 0.00 36.67 1.78
2210 2765 4.865761 GGCGCGTCCGTGAGCATA 62.866 66.667 8.43 0.00 36.67 3.14
2219 2774 3.499737 CAATGACCAGGCGCGTCC 61.500 66.667 7.31 9.59 0.00 4.79
2220 2775 2.434185 TCAATGACCAGGCGCGTC 60.434 61.111 0.21 0.21 0.00 5.19
2221 2776 1.884075 TAGTCAATGACCAGGCGCGT 61.884 55.000 10.12 0.00 32.18 6.01
2222 2777 1.148157 CTAGTCAATGACCAGGCGCG 61.148 60.000 10.12 0.00 32.18 6.86
2223 2778 0.175760 TCTAGTCAATGACCAGGCGC 59.824 55.000 10.12 0.00 32.18 6.53
2224 2779 1.204704 TGTCTAGTCAATGACCAGGCG 59.795 52.381 10.12 0.00 29.09 5.52
2225 2780 2.419297 CCTGTCTAGTCAATGACCAGGC 60.419 54.545 18.63 13.52 32.18 4.85
2226 2781 3.099905 TCCTGTCTAGTCAATGACCAGG 58.900 50.000 22.31 22.31 35.17 4.45
2227 2782 4.019858 TCTCCTGTCTAGTCAATGACCAG 58.980 47.826 10.12 6.09 32.18 4.00
2228 2783 4.019858 CTCTCCTGTCTAGTCAATGACCA 58.980 47.826 10.12 0.00 32.18 4.02
2229 2784 4.274147 TCTCTCCTGTCTAGTCAATGACC 58.726 47.826 10.12 0.00 32.18 4.02
2230 2785 5.189928 TCTCTCTCCTGTCTAGTCAATGAC 58.810 45.833 5.02 5.02 0.00 3.06
2231 2786 5.443230 TCTCTCTCCTGTCTAGTCAATGA 57.557 43.478 0.00 0.00 0.00 2.57
2232 2787 5.067674 CCTTCTCTCTCCTGTCTAGTCAATG 59.932 48.000 0.00 0.00 0.00 2.82
2233 2788 5.044476 TCCTTCTCTCTCCTGTCTAGTCAAT 60.044 44.000 0.00 0.00 0.00 2.57
2234 2789 4.289934 TCCTTCTCTCTCCTGTCTAGTCAA 59.710 45.833 0.00 0.00 0.00 3.18
2235 2790 3.847184 TCCTTCTCTCTCCTGTCTAGTCA 59.153 47.826 0.00 0.00 0.00 3.41
2236 2791 4.497291 TCCTTCTCTCTCCTGTCTAGTC 57.503 50.000 0.00 0.00 0.00 2.59
2237 2792 4.938575 TTCCTTCTCTCTCCTGTCTAGT 57.061 45.455 0.00 0.00 0.00 2.57
2238 2793 6.597832 TTTTTCCTTCTCTCTCCTGTCTAG 57.402 41.667 0.00 0.00 0.00 2.43
2258 2813 1.334160 GGTCCGGTTGGGTCATTTTT 58.666 50.000 0.00 0.00 37.00 1.94
2259 2814 0.541063 GGGTCCGGTTGGGTCATTTT 60.541 55.000 0.00 0.00 37.00 1.82
2260 2815 1.076014 GGGTCCGGTTGGGTCATTT 59.924 57.895 0.00 0.00 37.00 2.32
2261 2816 1.506028 ATGGGTCCGGTTGGGTCATT 61.506 55.000 0.00 0.00 37.00 2.57
2262 2817 1.921869 GATGGGTCCGGTTGGGTCAT 61.922 60.000 0.00 0.00 37.00 3.06
2263 2818 2.530661 ATGGGTCCGGTTGGGTCA 60.531 61.111 0.00 0.00 37.00 4.02
2264 2819 1.921869 ATGATGGGTCCGGTTGGGTC 61.922 60.000 0.00 0.00 37.00 4.46
2265 2820 0.622154 TATGATGGGTCCGGTTGGGT 60.622 55.000 0.00 0.00 37.00 4.51
2266 2821 0.771127 ATATGATGGGTCCGGTTGGG 59.229 55.000 0.00 0.00 35.24 4.12
2267 2822 1.699634 AGATATGATGGGTCCGGTTGG 59.300 52.381 0.00 0.00 0.00 3.77
2268 2823 3.403038 GAAGATATGATGGGTCCGGTTG 58.597 50.000 0.00 0.00 0.00 3.77
2269 2824 2.372172 GGAAGATATGATGGGTCCGGTT 59.628 50.000 0.00 0.00 0.00 4.44
2270 2825 1.978580 GGAAGATATGATGGGTCCGGT 59.021 52.381 0.00 0.00 0.00 5.28
2271 2826 1.279271 GGGAAGATATGATGGGTCCGG 59.721 57.143 0.00 0.00 0.00 5.14
2272 2827 2.260822 AGGGAAGATATGATGGGTCCG 58.739 52.381 0.00 0.00 0.00 4.79
2273 2828 6.617371 ACATATAGGGAAGATATGATGGGTCC 59.383 42.308 9.11 0.00 38.89 4.46
2274 2829 7.202047 GGACATATAGGGAAGATATGATGGGTC 60.202 44.444 9.11 0.00 38.89 4.46
2275 2830 6.617371 GGACATATAGGGAAGATATGATGGGT 59.383 42.308 9.11 0.00 38.89 4.51
2276 2831 6.239430 CGGACATATAGGGAAGATATGATGGG 60.239 46.154 9.11 0.00 38.89 4.00
2277 2832 6.239430 CCGGACATATAGGGAAGATATGATGG 60.239 46.154 0.00 4.68 38.89 3.51
2278 2833 6.753180 CCGGACATATAGGGAAGATATGATG 58.247 44.000 0.00 0.00 38.89 3.07
2279 2834 6.985653 CCGGACATATAGGGAAGATATGAT 57.014 41.667 0.00 0.00 38.89 2.45
2290 2845 0.608640 GGACAGCCCGGACATATAGG 59.391 60.000 0.73 0.00 0.00 2.57
2301 2856 1.745489 GATGGTTCACGGACAGCCC 60.745 63.158 0.00 0.00 0.00 5.19
2302 2857 0.392998 ATGATGGTTCACGGACAGCC 60.393 55.000 0.00 0.00 33.85 4.85
2303 2858 2.309528 TATGATGGTTCACGGACAGC 57.690 50.000 0.00 0.00 33.85 4.40
2304 2859 3.181466 TGGATATGATGGTTCACGGACAG 60.181 47.826 0.00 0.00 33.85 3.51
2305 2860 2.769095 TGGATATGATGGTTCACGGACA 59.231 45.455 0.00 0.00 33.85 4.02
2306 2861 3.469008 TGGATATGATGGTTCACGGAC 57.531 47.619 0.00 0.00 33.85 4.79
2307 2862 3.903714 AGATGGATATGATGGTTCACGGA 59.096 43.478 0.00 0.00 33.85 4.69
2308 2863 4.248859 GAGATGGATATGATGGTTCACGG 58.751 47.826 0.00 0.00 33.85 4.94
2309 2864 4.886579 TGAGATGGATATGATGGTTCACG 58.113 43.478 0.00 0.00 33.85 4.35
2310 2865 7.756395 ATTTGAGATGGATATGATGGTTCAC 57.244 36.000 0.00 0.00 33.85 3.18
2311 2866 9.457436 CATATTTGAGATGGATATGATGGTTCA 57.543 33.333 0.00 0.00 36.37 3.18
2312 2867 8.900781 CCATATTTGAGATGGATATGATGGTTC 58.099 37.037 0.00 0.00 45.89 3.62
2313 2868 7.837689 CCCATATTTGAGATGGATATGATGGTT 59.162 37.037 3.27 0.00 45.89 3.67
2314 2869 7.351952 CCCATATTTGAGATGGATATGATGGT 58.648 38.462 3.27 0.00 45.89 3.55
2315 2870 6.776116 CCCCATATTTGAGATGGATATGATGG 59.224 42.308 3.27 0.00 45.89 3.51
2316 2871 7.580007 TCCCCATATTTGAGATGGATATGATG 58.420 38.462 3.27 0.00 45.89 3.07
2317 2872 7.147177 CCTCCCCATATTTGAGATGGATATGAT 60.147 40.741 3.27 0.00 45.89 2.45
2318 2873 6.159222 CCTCCCCATATTTGAGATGGATATGA 59.841 42.308 3.27 0.00 45.89 2.15
2319 2874 6.159222 TCCTCCCCATATTTGAGATGGATATG 59.841 42.308 3.27 0.00 45.89 1.78
2320 2875 6.282576 TCCTCCCCATATTTGAGATGGATAT 58.717 40.000 3.27 0.00 45.89 1.63
2321 2876 5.675077 TCCTCCCCATATTTGAGATGGATA 58.325 41.667 3.27 0.00 45.89 2.59
2322 2877 4.516283 TCCTCCCCATATTTGAGATGGAT 58.484 43.478 3.27 0.00 45.89 3.41
2323 2878 3.953352 TCCTCCCCATATTTGAGATGGA 58.047 45.455 3.27 0.00 45.89 3.41
2324 2879 4.942363 ATCCTCCCCATATTTGAGATGG 57.058 45.455 0.00 0.00 43.12 3.51
2325 2880 8.216423 CCTTATATCCTCCCCATATTTGAGATG 58.784 40.741 0.00 0.00 0.00 2.90
2326 2881 7.351987 CCCTTATATCCTCCCCATATTTGAGAT 59.648 40.741 0.00 0.00 0.00 2.75
2327 2882 6.678411 CCCTTATATCCTCCCCATATTTGAGA 59.322 42.308 0.00 0.00 0.00 3.27
2328 2883 6.635875 GCCCTTATATCCTCCCCATATTTGAG 60.636 46.154 0.00 0.00 0.00 3.02
2329 2884 5.193728 GCCCTTATATCCTCCCCATATTTGA 59.806 44.000 0.00 0.00 0.00 2.69
2330 2885 5.194537 AGCCCTTATATCCTCCCCATATTTG 59.805 44.000 0.00 0.00 0.00 2.32
2331 2886 5.371413 AGCCCTTATATCCTCCCCATATTT 58.629 41.667 0.00 0.00 0.00 1.40
2332 2887 4.978388 GAGCCCTTATATCCTCCCCATATT 59.022 45.833 0.00 0.00 0.00 1.28
2333 2888 4.571951 GAGCCCTTATATCCTCCCCATAT 58.428 47.826 0.00 0.00 0.00 1.78
2334 2889 3.630054 CGAGCCCTTATATCCTCCCCATA 60.630 52.174 0.00 0.00 0.00 2.74
2335 2890 2.852130 GAGCCCTTATATCCTCCCCAT 58.148 52.381 0.00 0.00 0.00 4.00
2336 2891 1.552486 CGAGCCCTTATATCCTCCCCA 60.552 57.143 0.00 0.00 0.00 4.96
2337 2892 1.196012 CGAGCCCTTATATCCTCCCC 58.804 60.000 0.00 0.00 0.00 4.81
2338 2893 0.537653 GCGAGCCCTTATATCCTCCC 59.462 60.000 0.00 0.00 0.00 4.30
2339 2894 0.537653 GGCGAGCCCTTATATCCTCC 59.462 60.000 1.97 0.00 0.00 4.30
2340 2895 0.173708 CGGCGAGCCCTTATATCCTC 59.826 60.000 0.00 0.00 0.00 3.71
2341 2896 0.251653 TCGGCGAGCCCTTATATCCT 60.252 55.000 4.99 0.00 0.00 3.24
2342 2897 0.108756 GTCGGCGAGCCCTTATATCC 60.109 60.000 11.20 0.00 0.00 2.59
2343 2898 0.601558 TGTCGGCGAGCCCTTATATC 59.398 55.000 11.20 0.00 0.00 1.63
2344 2899 0.317479 GTGTCGGCGAGCCCTTATAT 59.683 55.000 11.20 0.00 0.00 0.86
2345 2900 1.737816 GTGTCGGCGAGCCCTTATA 59.262 57.895 11.20 0.00 0.00 0.98
2346 2901 2.499685 GTGTCGGCGAGCCCTTAT 59.500 61.111 11.20 0.00 0.00 1.73
2347 2902 4.124351 CGTGTCGGCGAGCCCTTA 62.124 66.667 11.20 0.00 0.00 2.69
2376 2931 2.159819 CTATGTGGAGGATCGCCCCG 62.160 65.000 1.26 0.00 34.37 5.73
2377 2932 1.674057 CTATGTGGAGGATCGCCCC 59.326 63.158 1.26 0.00 34.37 5.80
2378 2933 0.832135 TCCTATGTGGAGGATCGCCC 60.832 60.000 1.26 0.00 40.89 6.13
2379 2934 2.746697 TCCTATGTGGAGGATCGCC 58.253 57.895 0.00 0.00 40.89 5.54
2389 2944 1.983119 ATGGGGCCACGTCCTATGTG 61.983 60.000 4.39 0.00 34.96 3.21
2390 2945 1.692749 ATGGGGCCACGTCCTATGT 60.693 57.895 4.39 0.00 24.25 2.29
2391 2946 1.071471 GATGGGGCCACGTCCTATG 59.929 63.158 17.13 0.00 25.81 2.23
2392 2947 2.147387 GGATGGGGCCACGTCCTAT 61.147 63.158 35.37 6.75 42.17 2.57
2393 2948 2.766651 GGATGGGGCCACGTCCTA 60.767 66.667 35.37 0.58 42.17 2.94
2402 2957 4.271016 GATGGTCCGGGATGGGGC 62.271 72.222 0.00 0.00 38.76 5.80
2403 2958 1.645402 AAAGATGGTCCGGGATGGGG 61.645 60.000 0.00 0.00 38.76 4.96
2404 2959 0.258774 AAAAGATGGTCCGGGATGGG 59.741 55.000 0.00 0.00 38.76 4.00
2405 2960 1.212935 AGAAAAGATGGTCCGGGATGG 59.787 52.381 0.00 0.00 40.09 3.51
2406 2961 2.171448 AGAGAAAAGATGGTCCGGGATG 59.829 50.000 0.00 0.00 0.00 3.51
2407 2962 2.482494 AGAGAAAAGATGGTCCGGGAT 58.518 47.619 0.00 0.00 0.00 3.85
2408 2963 1.952621 AGAGAAAAGATGGTCCGGGA 58.047 50.000 0.00 0.00 0.00 5.14
2409 2964 2.789409 AAGAGAAAAGATGGTCCGGG 57.211 50.000 0.00 0.00 0.00 5.73
2410 2965 6.759497 ATAAAAAGAGAAAAGATGGTCCGG 57.241 37.500 0.00 0.00 0.00 5.14
2435 2990 9.699410 AGATGAAGAGAGAGAGAGAAAAGAATA 57.301 33.333 0.00 0.00 0.00 1.75
2436 2991 8.599624 AGATGAAGAGAGAGAGAGAAAAGAAT 57.400 34.615 0.00 0.00 0.00 2.40
2437 2992 8.421249 AAGATGAAGAGAGAGAGAGAAAAGAA 57.579 34.615 0.00 0.00 0.00 2.52
2438 2993 7.669304 TGAAGATGAAGAGAGAGAGAGAAAAGA 59.331 37.037 0.00 0.00 0.00 2.52
2439 2994 7.756722 GTGAAGATGAAGAGAGAGAGAGAAAAG 59.243 40.741 0.00 0.00 0.00 2.27
2440 2995 7.309744 GGTGAAGATGAAGAGAGAGAGAGAAAA 60.310 40.741 0.00 0.00 0.00 2.29
2441 2996 6.152661 GGTGAAGATGAAGAGAGAGAGAGAAA 59.847 42.308 0.00 0.00 0.00 2.52
2442 2997 5.652014 GGTGAAGATGAAGAGAGAGAGAGAA 59.348 44.000 0.00 0.00 0.00 2.87
2443 2998 5.192927 GGTGAAGATGAAGAGAGAGAGAGA 58.807 45.833 0.00 0.00 0.00 3.10
2444 2999 4.949238 TGGTGAAGATGAAGAGAGAGAGAG 59.051 45.833 0.00 0.00 0.00 3.20
2445 3000 4.928263 TGGTGAAGATGAAGAGAGAGAGA 58.072 43.478 0.00 0.00 0.00 3.10
2446 3001 5.657826 TTGGTGAAGATGAAGAGAGAGAG 57.342 43.478 0.00 0.00 0.00 3.20
2447 3002 5.718607 TGATTGGTGAAGATGAAGAGAGAGA 59.281 40.000 0.00 0.00 0.00 3.10
2448 3003 5.811613 GTGATTGGTGAAGATGAAGAGAGAG 59.188 44.000 0.00 0.00 0.00 3.20
2449 3004 5.623141 CGTGATTGGTGAAGATGAAGAGAGA 60.623 44.000 0.00 0.00 0.00 3.10
2450 3005 4.565962 CGTGATTGGTGAAGATGAAGAGAG 59.434 45.833 0.00 0.00 0.00 3.20
2451 3006 4.021104 ACGTGATTGGTGAAGATGAAGAGA 60.021 41.667 0.00 0.00 0.00 3.10
2452 3007 4.092529 CACGTGATTGGTGAAGATGAAGAG 59.907 45.833 10.90 0.00 37.60 2.85
2453 3008 3.996363 CACGTGATTGGTGAAGATGAAGA 59.004 43.478 10.90 0.00 37.60 2.87
2454 3009 3.425359 GCACGTGATTGGTGAAGATGAAG 60.425 47.826 22.23 0.00 37.60 3.02
2455 3010 2.483877 GCACGTGATTGGTGAAGATGAA 59.516 45.455 22.23 0.00 37.60 2.57
2456 3011 2.076100 GCACGTGATTGGTGAAGATGA 58.924 47.619 22.23 0.00 37.60 2.92
2457 3012 1.805943 TGCACGTGATTGGTGAAGATG 59.194 47.619 22.23 0.00 37.60 2.90
2458 3013 2.183478 TGCACGTGATTGGTGAAGAT 57.817 45.000 22.23 0.00 37.60 2.40
2459 3014 1.872952 CTTGCACGTGATTGGTGAAGA 59.127 47.619 22.23 0.00 37.60 2.87
2460 3015 1.603802 ACTTGCACGTGATTGGTGAAG 59.396 47.619 22.23 10.44 37.60 3.02
2461 3016 1.333308 CACTTGCACGTGATTGGTGAA 59.667 47.619 22.23 0.00 37.60 3.18
2462 3017 0.943673 CACTTGCACGTGATTGGTGA 59.056 50.000 22.23 0.00 37.60 4.02
2463 3018 0.943673 TCACTTGCACGTGATTGGTG 59.056 50.000 20.99 19.72 38.89 4.17
2464 3019 0.944386 GTCACTTGCACGTGATTGGT 59.056 50.000 26.42 8.84 44.84 3.67
2465 3020 0.238289 GGTCACTTGCACGTGATTGG 59.762 55.000 26.42 8.17 44.84 3.16
2466 3021 0.110688 CGGTCACTTGCACGTGATTG 60.111 55.000 26.42 18.26 44.84 2.67
2467 3022 1.227999 CCGGTCACTTGCACGTGATT 61.228 55.000 26.42 0.00 44.84 2.57
2468 3023 1.667830 CCGGTCACTTGCACGTGAT 60.668 57.895 26.42 0.00 44.84 3.06
2469 3024 2.279851 CCGGTCACTTGCACGTGA 60.280 61.111 20.99 20.99 41.33 4.35
2470 3025 2.279851 TCCGGTCACTTGCACGTG 60.280 61.111 16.76 16.76 36.25 4.49
2471 3026 2.279918 GTCCGGTCACTTGCACGT 60.280 61.111 0.00 0.00 0.00 4.49
2472 3027 0.389296 TATGTCCGGTCACTTGCACG 60.389 55.000 2.72 0.00 0.00 5.34
2473 3028 1.665679 CATATGTCCGGTCACTTGCAC 59.334 52.381 2.72 0.00 0.00 4.57
2474 3029 1.552792 TCATATGTCCGGTCACTTGCA 59.447 47.619 2.72 0.00 0.00 4.08
2475 3030 2.205074 CTCATATGTCCGGTCACTTGC 58.795 52.381 2.72 0.00 0.00 4.01
2476 3031 2.430694 TCCTCATATGTCCGGTCACTTG 59.569 50.000 2.72 5.02 0.00 3.16
2477 3032 2.747177 TCCTCATATGTCCGGTCACTT 58.253 47.619 2.72 0.00 0.00 3.16
2478 3033 2.454336 TCCTCATATGTCCGGTCACT 57.546 50.000 2.72 0.00 0.00 3.41
2479 3034 2.693591 TCTTCCTCATATGTCCGGTCAC 59.306 50.000 2.72 0.00 0.00 3.67
2480 3035 3.026707 TCTTCCTCATATGTCCGGTCA 57.973 47.619 3.25 3.25 0.00 4.02
2481 3036 4.402056 TTTCTTCCTCATATGTCCGGTC 57.598 45.455 0.00 0.00 0.00 4.79
2482 3037 4.837093 TTTTCTTCCTCATATGTCCGGT 57.163 40.909 0.00 0.00 0.00 5.28
2483 3038 6.428159 CCTTATTTTCTTCCTCATATGTCCGG 59.572 42.308 1.90 0.00 0.00 5.14
2484 3039 7.217200 TCCTTATTTTCTTCCTCATATGTCCG 58.783 38.462 1.90 0.00 0.00 4.79
2485 3040 9.579932 AATCCTTATTTTCTTCCTCATATGTCC 57.420 33.333 1.90 0.00 0.00 4.02
2487 3042 9.927081 ACAATCCTTATTTTCTTCCTCATATGT 57.073 29.630 1.90 0.00 0.00 2.29
2489 3044 9.359653 CCACAATCCTTATTTTCTTCCTCATAT 57.640 33.333 0.00 0.00 0.00 1.78
2490 3045 8.336235 ACCACAATCCTTATTTTCTTCCTCATA 58.664 33.333 0.00 0.00 0.00 2.15
2491 3046 7.184862 ACCACAATCCTTATTTTCTTCCTCAT 58.815 34.615 0.00 0.00 0.00 2.90
2492 3047 6.552008 ACCACAATCCTTATTTTCTTCCTCA 58.448 36.000 0.00 0.00 0.00 3.86
2493 3048 7.315890 CAACCACAATCCTTATTTTCTTCCTC 58.684 38.462 0.00 0.00 0.00 3.71
2494 3049 6.295292 GCAACCACAATCCTTATTTTCTTCCT 60.295 38.462 0.00 0.00 0.00 3.36
2495 3050 5.869344 GCAACCACAATCCTTATTTTCTTCC 59.131 40.000 0.00 0.00 0.00 3.46
2496 3051 5.572896 CGCAACCACAATCCTTATTTTCTTC 59.427 40.000 0.00 0.00 0.00 2.87
2497 3052 5.469479 CGCAACCACAATCCTTATTTTCTT 58.531 37.500 0.00 0.00 0.00 2.52
2498 3053 4.618227 GCGCAACCACAATCCTTATTTTCT 60.618 41.667 0.30 0.00 0.00 2.52
2499 3054 3.612423 GCGCAACCACAATCCTTATTTTC 59.388 43.478 0.30 0.00 0.00 2.29
2500 3055 3.584834 GCGCAACCACAATCCTTATTTT 58.415 40.909 0.30 0.00 0.00 1.82
2501 3056 2.415357 CGCGCAACCACAATCCTTATTT 60.415 45.455 8.75 0.00 0.00 1.40
2502 3057 1.132262 CGCGCAACCACAATCCTTATT 59.868 47.619 8.75 0.00 0.00 1.40
2503 3058 0.732571 CGCGCAACCACAATCCTTAT 59.267 50.000 8.75 0.00 0.00 1.73
2504 3059 1.302383 CCGCGCAACCACAATCCTTA 61.302 55.000 8.75 0.00 0.00 2.69
2505 3060 2.625823 CCGCGCAACCACAATCCTT 61.626 57.895 8.75 0.00 0.00 3.36
2506 3061 2.819984 ATCCGCGCAACCACAATCCT 62.820 55.000 8.75 0.00 0.00 3.24
2507 3062 2.406616 ATCCGCGCAACCACAATCC 61.407 57.895 8.75 0.00 0.00 3.01
2508 3063 1.226379 CATCCGCGCAACCACAATC 60.226 57.895 8.75 0.00 0.00 2.67
2509 3064 2.699768 CCATCCGCGCAACCACAAT 61.700 57.895 8.75 0.00 0.00 2.71
2510 3065 3.361158 CCATCCGCGCAACCACAA 61.361 61.111 8.75 0.00 0.00 3.33
2511 3066 2.245438 TATCCATCCGCGCAACCACA 62.245 55.000 8.75 0.00 0.00 4.17
2512 3067 1.092921 TTATCCATCCGCGCAACCAC 61.093 55.000 8.75 0.00 0.00 4.16
2513 3068 0.393132 TTTATCCATCCGCGCAACCA 60.393 50.000 8.75 0.00 0.00 3.67
2514 3069 0.951558 ATTTATCCATCCGCGCAACC 59.048 50.000 8.75 0.00 0.00 3.77
2515 3070 2.774439 AATTTATCCATCCGCGCAAC 57.226 45.000 8.75 0.00 0.00 4.17
2516 3071 3.734463 TCTAATTTATCCATCCGCGCAA 58.266 40.909 8.75 0.00 0.00 4.85
2517 3072 3.394674 TCTAATTTATCCATCCGCGCA 57.605 42.857 8.75 0.00 0.00 6.09
2518 3073 5.753438 TGATATCTAATTTATCCATCCGCGC 59.247 40.000 0.00 0.00 0.00 6.86
2519 3074 7.770801 TTGATATCTAATTTATCCATCCGCG 57.229 36.000 0.00 0.00 0.00 6.46
2547 3102 2.049433 CACTGACCGGACGTGTCC 60.049 66.667 9.46 9.04 46.18 4.02
2548 3103 1.371389 GTCACTGACCGGACGTGTC 60.371 63.158 9.46 9.20 0.00 3.67
2549 3104 2.726274 GTCACTGACCGGACGTGT 59.274 61.111 9.46 1.91 0.00 4.49
2550 3105 2.049433 GGTCACTGACCGGACGTG 60.049 66.667 9.46 15.01 43.14 4.49
2573 3128 3.168237 GATCAAATGCCCGCGGACG 62.168 63.158 30.73 12.70 39.67 4.79
2574 3129 2.715624 GATCAAATGCCCGCGGAC 59.284 61.111 30.73 18.13 0.00 4.79
2575 3130 2.894879 CGATCAAATGCCCGCGGA 60.895 61.111 30.73 8.21 0.00 5.54
2576 3131 3.952675 CCGATCAAATGCCCGCGG 61.953 66.667 21.04 21.04 0.00 6.46
2577 3132 3.168237 GACCGATCAAATGCCCGCG 62.168 63.158 0.00 0.00 0.00 6.46
2578 3133 2.715624 GACCGATCAAATGCCCGC 59.284 61.111 0.00 0.00 0.00 6.13
2579 3134 1.087202 TTCGACCGATCAAATGCCCG 61.087 55.000 0.00 0.00 0.00 6.13
2580 3135 1.308998 ATTCGACCGATCAAATGCCC 58.691 50.000 0.00 0.00 0.00 5.36
2581 3136 3.807622 TCTAATTCGACCGATCAAATGCC 59.192 43.478 0.00 0.00 0.00 4.40
2582 3137 4.084328 CCTCTAATTCGACCGATCAAATGC 60.084 45.833 0.00 0.00 0.00 3.56
2583 3138 5.050490 ACCTCTAATTCGACCGATCAAATG 58.950 41.667 0.00 0.00 0.00 2.32
2584 3139 5.277857 ACCTCTAATTCGACCGATCAAAT 57.722 39.130 0.00 0.00 0.00 2.32
2585 3140 4.730949 ACCTCTAATTCGACCGATCAAA 57.269 40.909 0.00 0.00 0.00 2.69
2586 3141 4.641541 TGTACCTCTAATTCGACCGATCAA 59.358 41.667 0.00 0.00 0.00 2.57
2587 3142 4.201657 TGTACCTCTAATTCGACCGATCA 58.798 43.478 0.00 0.00 0.00 2.92
2588 3143 4.825546 TGTACCTCTAATTCGACCGATC 57.174 45.455 0.00 0.00 0.00 3.69
2589 3144 4.825634 TCATGTACCTCTAATTCGACCGAT 59.174 41.667 0.00 0.00 0.00 4.18
2590 3145 4.036027 GTCATGTACCTCTAATTCGACCGA 59.964 45.833 0.00 0.00 0.00 4.69
2591 3146 4.036498 AGTCATGTACCTCTAATTCGACCG 59.964 45.833 0.00 0.00 0.00 4.79
2592 3147 5.067413 TCAGTCATGTACCTCTAATTCGACC 59.933 44.000 0.00 0.00 0.00 4.79
2593 3148 6.132791 TCAGTCATGTACCTCTAATTCGAC 57.867 41.667 0.00 0.00 0.00 4.20
2594 3149 6.602009 TCTTCAGTCATGTACCTCTAATTCGA 59.398 38.462 0.00 0.00 0.00 3.71
2595 3150 6.796426 TCTTCAGTCATGTACCTCTAATTCG 58.204 40.000 0.00 0.00 0.00 3.34
2596 3151 7.170658 GCATCTTCAGTCATGTACCTCTAATTC 59.829 40.741 0.00 0.00 0.00 2.17
2597 3152 6.989169 GCATCTTCAGTCATGTACCTCTAATT 59.011 38.462 0.00 0.00 0.00 1.40
2598 3153 6.326064 AGCATCTTCAGTCATGTACCTCTAAT 59.674 38.462 0.00 0.00 0.00 1.73
2599 3154 5.658634 AGCATCTTCAGTCATGTACCTCTAA 59.341 40.000 0.00 0.00 0.00 2.10
2600 3155 5.204292 AGCATCTTCAGTCATGTACCTCTA 58.796 41.667 0.00 0.00 0.00 2.43
2601 3156 4.029520 AGCATCTTCAGTCATGTACCTCT 58.970 43.478 0.00 0.00 0.00 3.69
2602 3157 4.367450 GAGCATCTTCAGTCATGTACCTC 58.633 47.826 0.00 0.00 0.00 3.85
2603 3158 4.399004 GAGCATCTTCAGTCATGTACCT 57.601 45.455 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.