Multiple sequence alignment - TraesCS6D01G046600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G046600 chr6D 100.000 2411 0 0 1 2411 20850623 20848213 0.000000e+00 4453.0
1 TraesCS6D01G046600 chr6D 92.573 579 35 2 999 1570 20818650 20818073 0.000000e+00 824.0
2 TraesCS6D01G046600 chr6D 84.941 757 89 20 748 1488 20780357 20781104 0.000000e+00 743.0
3 TraesCS6D01G046600 chr6D 89.575 259 13 3 1973 2221 20817670 20817416 1.390000e-82 316.0
4 TraesCS6D01G046600 chr6D 89.730 185 14 4 1699 1882 20817857 20817677 5.180000e-57 231.0
5 TraesCS6D01G046600 chr6D 92.208 77 5 1 1715 1791 20782140 20782215 9.110000e-20 108.0
6 TraesCS6D01G046600 chr6D 94.000 50 2 1 1573 1621 20818049 20818000 9.240000e-10 75.0
7 TraesCS6D01G046600 chr6A 91.708 1423 74 11 580 1966 21138183 21136769 0.000000e+00 1934.0
8 TraesCS6D01G046600 chr6A 83.665 753 79 30 748 1488 20870889 20871609 0.000000e+00 669.0
9 TraesCS6D01G046600 chr6A 87.089 426 29 8 1955 2362 21136749 21136332 2.180000e-125 459.0
10 TraesCS6D01G046600 chr6A 85.542 83 11 1 1710 1791 20871948 20872030 4.270000e-13 86.1
11 TraesCS6D01G046600 chr7B 94.799 423 16 2 995 1411 661999010 661999432 0.000000e+00 654.0
12 TraesCS6D01G046600 chr7B 94.286 420 18 2 998 1411 662311476 662311057 2.610000e-179 638.0
13 TraesCS6D01G046600 chr7D 94.563 423 17 2 995 1411 588409305 588409727 0.000000e+00 649.0
14 TraesCS6D01G046600 chr7D 93.810 420 20 2 998 1411 588471768 588471349 5.660000e-176 627.0
15 TraesCS6D01G046600 chr3D 91.726 423 23 6 993 1409 50658454 50658038 5.780000e-161 577.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G046600 chr6D 20848213 20850623 2410 True 4453.00 4453 100.0000 1 2411 1 chr6D.!!$R1 2410
1 TraesCS6D01G046600 chr6D 20780357 20782215 1858 False 425.50 743 88.5745 748 1791 2 chr6D.!!$F1 1043
2 TraesCS6D01G046600 chr6D 20817416 20818650 1234 True 361.50 824 91.4695 999 2221 4 chr6D.!!$R2 1222
3 TraesCS6D01G046600 chr6A 21136332 21138183 1851 True 1196.50 1934 89.3985 580 2362 2 chr6A.!!$R1 1782
4 TraesCS6D01G046600 chr6A 20870889 20872030 1141 False 377.55 669 84.6035 748 1791 2 chr6A.!!$F1 1043

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.035056 CCTCTTGGCAAGGGAATCGT 60.035 55.0 28.37 0.0 0.0 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1655 2612 0.322816 CAAAGCCTAGCTGCCTGGAA 60.323 55.0 11.91 0.0 39.62 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.644992 CCACCTGAGGCGCAAAAC 59.355 61.111 10.83 0.00 0.00 2.43
18 19 1.898574 CCACCTGAGGCGCAAAACT 60.899 57.895 10.83 0.00 0.00 2.66
19 20 0.605319 CCACCTGAGGCGCAAAACTA 60.605 55.000 10.83 0.00 0.00 2.24
20 21 0.517316 CACCTGAGGCGCAAAACTAC 59.483 55.000 10.83 0.00 0.00 2.73
21 22 0.949105 ACCTGAGGCGCAAAACTACG 60.949 55.000 10.83 0.00 0.00 3.51
22 23 0.669318 CCTGAGGCGCAAAACTACGA 60.669 55.000 10.83 0.00 0.00 3.43
23 24 0.438830 CTGAGGCGCAAAACTACGAC 59.561 55.000 10.83 0.00 37.66 4.34
24 25 1.279527 TGAGGCGCAAAACTACGACG 61.280 55.000 10.83 0.00 43.77 5.12
25 26 1.005294 GAGGCGCAAAACTACGACGA 61.005 55.000 10.83 0.00 43.77 4.20
26 27 1.129209 GGCGCAAAACTACGACGAC 59.871 57.895 10.83 0.00 0.00 4.34
27 28 1.129209 GCGCAAAACTACGACGACC 59.871 57.895 0.30 0.00 0.00 4.79
28 29 1.550659 GCGCAAAACTACGACGACCA 61.551 55.000 0.30 0.00 0.00 4.02
29 30 0.854062 CGCAAAACTACGACGACCAA 59.146 50.000 0.00 0.00 0.00 3.67
30 31 1.258458 CGCAAAACTACGACGACCAAA 59.742 47.619 0.00 0.00 0.00 3.28
31 32 2.658224 CGCAAAACTACGACGACCAAAG 60.658 50.000 0.00 0.00 0.00 2.77
32 33 2.540931 GCAAAACTACGACGACCAAAGA 59.459 45.455 0.00 0.00 0.00 2.52
33 34 3.362693 GCAAAACTACGACGACCAAAGAG 60.363 47.826 0.00 0.00 0.00 2.85
34 35 3.996150 AAACTACGACGACCAAAGAGA 57.004 42.857 0.00 0.00 0.00 3.10
35 36 2.985406 ACTACGACGACCAAAGAGAC 57.015 50.000 0.00 0.00 0.00 3.36
36 37 2.502295 ACTACGACGACCAAAGAGACT 58.498 47.619 0.00 0.00 0.00 3.24
37 38 3.668447 ACTACGACGACCAAAGAGACTA 58.332 45.455 0.00 0.00 0.00 2.59
38 39 3.683822 ACTACGACGACCAAAGAGACTAG 59.316 47.826 0.00 0.00 0.00 2.57
39 40 1.199558 ACGACGACCAAAGAGACTAGC 59.800 52.381 0.00 0.00 0.00 3.42
40 41 1.790838 CGACGACCAAAGAGACTAGCG 60.791 57.143 0.00 0.00 0.00 4.26
41 42 1.199558 GACGACCAAAGAGACTAGCGT 59.800 52.381 0.00 0.00 0.00 5.07
42 43 2.417933 GACGACCAAAGAGACTAGCGTA 59.582 50.000 0.00 0.00 0.00 4.42
43 44 2.816087 ACGACCAAAGAGACTAGCGTAA 59.184 45.455 0.00 0.00 0.00 3.18
44 45 3.254166 ACGACCAAAGAGACTAGCGTAAA 59.746 43.478 0.00 0.00 0.00 2.01
45 46 3.852536 CGACCAAAGAGACTAGCGTAAAG 59.147 47.826 0.00 0.00 0.00 1.85
46 47 4.174762 GACCAAAGAGACTAGCGTAAAGG 58.825 47.826 0.00 0.00 0.00 3.11
47 48 3.830755 ACCAAAGAGACTAGCGTAAAGGA 59.169 43.478 0.00 0.00 0.00 3.36
48 49 4.174762 CCAAAGAGACTAGCGTAAAGGAC 58.825 47.826 0.00 0.00 0.00 3.85
49 50 4.174762 CAAAGAGACTAGCGTAAAGGACC 58.825 47.826 0.00 0.00 0.00 4.46
50 51 2.377073 AGAGACTAGCGTAAAGGACCC 58.623 52.381 0.00 0.00 0.00 4.46
51 52 2.025131 AGAGACTAGCGTAAAGGACCCT 60.025 50.000 0.00 0.00 0.00 4.34
52 53 2.358582 GAGACTAGCGTAAAGGACCCTC 59.641 54.545 0.00 0.00 0.00 4.30
53 54 2.097825 GACTAGCGTAAAGGACCCTCA 58.902 52.381 0.00 0.00 0.00 3.86
54 55 2.694109 GACTAGCGTAAAGGACCCTCAT 59.306 50.000 0.00 0.00 0.00 2.90
55 56 3.105283 ACTAGCGTAAAGGACCCTCATT 58.895 45.455 0.00 0.00 0.00 2.57
56 57 3.518303 ACTAGCGTAAAGGACCCTCATTT 59.482 43.478 0.00 0.00 34.54 2.32
57 58 2.987232 AGCGTAAAGGACCCTCATTTC 58.013 47.619 0.00 0.00 32.29 2.17
58 59 2.014857 GCGTAAAGGACCCTCATTTCC 58.985 52.381 0.00 0.00 32.29 3.13
59 60 2.640184 CGTAAAGGACCCTCATTTCCC 58.360 52.381 0.00 0.00 32.29 3.97
60 61 2.026636 CGTAAAGGACCCTCATTTCCCA 60.027 50.000 0.00 0.00 32.29 4.37
61 62 2.604912 AAAGGACCCTCATTTCCCAC 57.395 50.000 0.00 0.00 31.51 4.61
62 63 0.704664 AAGGACCCTCATTTCCCACC 59.295 55.000 0.00 0.00 31.51 4.61
63 64 1.214992 AGGACCCTCATTTCCCACCC 61.215 60.000 0.00 0.00 31.51 4.61
64 65 1.506028 GGACCCTCATTTCCCACCCA 61.506 60.000 0.00 0.00 0.00 4.51
65 66 0.631212 GACCCTCATTTCCCACCCAT 59.369 55.000 0.00 0.00 0.00 4.00
66 67 0.336048 ACCCTCATTTCCCACCCATG 59.664 55.000 0.00 0.00 0.00 3.66
67 68 0.397535 CCCTCATTTCCCACCCATGG 60.398 60.000 4.14 4.14 46.81 3.66
105 106 2.268920 CCCCCACATGTCGTCCAG 59.731 66.667 0.00 0.00 0.00 3.86
106 107 2.290287 CCCCCACATGTCGTCCAGA 61.290 63.158 0.00 0.00 0.00 3.86
107 108 1.626356 CCCCCACATGTCGTCCAGAT 61.626 60.000 0.00 0.00 0.00 2.90
108 109 0.179073 CCCCACATGTCGTCCAGATC 60.179 60.000 0.00 0.00 0.00 2.75
109 110 0.826715 CCCACATGTCGTCCAGATCT 59.173 55.000 0.00 0.00 0.00 2.75
110 111 1.472201 CCCACATGTCGTCCAGATCTG 60.472 57.143 16.24 16.24 0.00 2.90
119 120 2.996395 CCAGATCTGGCTGCCACT 59.004 61.111 28.45 11.10 44.73 4.00
120 121 1.451567 CCAGATCTGGCTGCCACTG 60.452 63.158 28.45 23.66 44.73 3.66
121 122 2.113433 CAGATCTGGCTGCCACTGC 61.113 63.158 19.30 9.47 38.26 4.40
122 123 2.827642 GATCTGGCTGCCACTGCC 60.828 66.667 19.30 8.41 46.46 4.85
123 124 4.437587 ATCTGGCTGCCACTGCCC 62.438 66.667 19.30 0.00 45.86 5.36
149 150 4.675404 CGCTCCCGGATAATGGAC 57.325 61.111 0.73 0.00 0.00 4.02
150 151 1.372997 CGCTCCCGGATAATGGACG 60.373 63.158 0.73 0.00 0.00 4.79
151 152 1.802337 CGCTCCCGGATAATGGACGA 61.802 60.000 0.73 0.00 31.33 4.20
152 153 0.391597 GCTCCCGGATAATGGACGAA 59.608 55.000 0.73 0.00 0.00 3.85
153 154 1.872653 GCTCCCGGATAATGGACGAAC 60.873 57.143 0.73 0.00 0.00 3.95
154 155 1.687123 CTCCCGGATAATGGACGAACT 59.313 52.381 0.73 0.00 0.00 3.01
155 156 1.684983 TCCCGGATAATGGACGAACTC 59.315 52.381 0.73 0.00 0.00 3.01
156 157 1.411246 CCCGGATAATGGACGAACTCA 59.589 52.381 0.73 0.00 0.00 3.41
157 158 2.470821 CCGGATAATGGACGAACTCAC 58.529 52.381 0.00 0.00 0.00 3.51
158 159 2.470821 CGGATAATGGACGAACTCACC 58.529 52.381 0.00 0.00 0.00 4.02
159 160 2.159156 CGGATAATGGACGAACTCACCA 60.159 50.000 0.00 0.00 38.09 4.17
160 161 3.458189 GGATAATGGACGAACTCACCAG 58.542 50.000 0.00 0.00 37.12 4.00
161 162 3.118738 GGATAATGGACGAACTCACCAGT 60.119 47.826 0.00 0.00 37.12 4.00
162 163 2.169832 AATGGACGAACTCACCAGTG 57.830 50.000 0.00 0.00 37.12 3.66
163 164 0.321671 ATGGACGAACTCACCAGTGG 59.678 55.000 7.91 7.91 37.12 4.00
164 165 1.668151 GGACGAACTCACCAGTGGC 60.668 63.158 9.78 0.00 31.06 5.01
165 166 1.069090 GACGAACTCACCAGTGGCA 59.931 57.895 9.78 0.00 31.06 4.92
166 167 1.222115 GACGAACTCACCAGTGGCAC 61.222 60.000 10.29 10.29 31.06 5.01
167 168 1.227527 CGAACTCACCAGTGGCACA 60.228 57.895 21.41 0.00 31.06 4.57
178 179 2.832498 TGGCACACCACCAATCGA 59.168 55.556 0.00 0.00 42.67 3.59
179 180 1.149401 TGGCACACCACCAATCGAA 59.851 52.632 0.00 0.00 42.67 3.71
180 181 0.888736 TGGCACACCACCAATCGAAG 60.889 55.000 0.00 0.00 42.67 3.79
181 182 1.586154 GGCACACCACCAATCGAAGG 61.586 60.000 5.78 5.78 35.26 3.46
182 183 1.586154 GCACACCACCAATCGAAGGG 61.586 60.000 11.44 8.04 0.00 3.95
183 184 0.036164 CACACCACCAATCGAAGGGA 59.964 55.000 12.21 0.00 0.00 4.20
184 185 0.036306 ACACCACCAATCGAAGGGAC 59.964 55.000 12.21 0.00 0.00 4.46
185 186 1.019278 CACCACCAATCGAAGGGACG 61.019 60.000 12.21 4.51 0.00 4.79
186 187 2.106683 CCACCAATCGAAGGGACGC 61.107 63.158 12.21 0.00 0.00 5.19
187 188 1.375396 CACCAATCGAAGGGACGCA 60.375 57.895 12.21 0.00 0.00 5.24
188 189 0.953471 CACCAATCGAAGGGACGCAA 60.953 55.000 12.21 0.00 0.00 4.85
189 190 0.953960 ACCAATCGAAGGGACGCAAC 60.954 55.000 12.21 0.00 0.00 4.17
190 191 1.419922 CAATCGAAGGGACGCAACG 59.580 57.895 0.00 0.00 0.00 4.10
191 192 1.011968 CAATCGAAGGGACGCAACGA 61.012 55.000 11.71 11.71 37.39 3.85
192 193 0.108329 AATCGAAGGGACGCAACGAT 60.108 50.000 14.39 14.39 43.73 3.73
193 194 0.806102 ATCGAAGGGACGCAACGATG 60.806 55.000 17.59 0.00 41.09 3.84
194 195 1.445410 CGAAGGGACGCAACGATGA 60.445 57.895 0.00 0.00 0.00 2.92
195 196 0.806102 CGAAGGGACGCAACGATGAT 60.806 55.000 0.00 0.00 0.00 2.45
196 197 1.369625 GAAGGGACGCAACGATGATT 58.630 50.000 0.00 0.00 0.00 2.57
197 198 1.327764 GAAGGGACGCAACGATGATTC 59.672 52.381 0.00 0.00 0.00 2.52
198 199 0.462047 AGGGACGCAACGATGATTCC 60.462 55.000 0.00 0.54 0.00 3.01
199 200 0.462047 GGGACGCAACGATGATTCCT 60.462 55.000 11.25 0.00 32.31 3.36
200 201 1.369625 GGACGCAACGATGATTCCTT 58.630 50.000 0.00 0.00 0.00 3.36
201 202 1.062587 GGACGCAACGATGATTCCTTG 59.937 52.381 0.00 0.00 0.00 3.61
202 203 1.062587 GACGCAACGATGATTCCTTGG 59.937 52.381 0.00 0.00 0.00 3.61
203 204 0.248215 CGCAACGATGATTCCTTGGC 60.248 55.000 0.00 0.00 0.00 4.52
204 205 0.101219 GCAACGATGATTCCTTGGCC 59.899 55.000 0.00 0.00 0.00 5.36
205 206 0.740737 CAACGATGATTCCTTGGCCC 59.259 55.000 0.00 0.00 0.00 5.80
206 207 0.625849 AACGATGATTCCTTGGCCCT 59.374 50.000 0.00 0.00 0.00 5.19
207 208 0.181350 ACGATGATTCCTTGGCCCTC 59.819 55.000 0.00 0.00 0.00 4.30
208 209 0.471617 CGATGATTCCTTGGCCCTCT 59.528 55.000 0.00 0.00 0.00 3.69
209 210 1.133976 CGATGATTCCTTGGCCCTCTT 60.134 52.381 0.00 0.00 0.00 2.85
210 211 2.305009 GATGATTCCTTGGCCCTCTTG 58.695 52.381 0.00 0.00 0.00 3.02
211 212 0.332632 TGATTCCTTGGCCCTCTTGG 59.667 55.000 0.00 0.00 37.09 3.61
222 223 2.785868 CCTCTTGGCAAGGGAATCG 58.214 57.895 28.37 7.70 0.00 3.34
223 224 0.035056 CCTCTTGGCAAGGGAATCGT 60.035 55.000 28.37 0.00 0.00 3.73
224 225 1.373570 CTCTTGGCAAGGGAATCGTC 58.626 55.000 22.76 0.00 0.00 4.20
225 226 0.035439 TCTTGGCAAGGGAATCGTCC 60.035 55.000 25.92 0.00 44.10 4.79
226 227 0.035056 CTTGGCAAGGGAATCGTCCT 60.035 55.000 19.55 0.00 44.28 3.85
227 228 0.035439 TTGGCAAGGGAATCGTCCTC 60.035 55.000 0.00 0.00 44.28 3.71
228 229 1.198094 TGGCAAGGGAATCGTCCTCA 61.198 55.000 0.00 0.00 44.28 3.86
229 230 0.035439 GGCAAGGGAATCGTCCTCAA 60.035 55.000 0.00 0.00 44.28 3.02
230 231 1.408822 GGCAAGGGAATCGTCCTCAAT 60.409 52.381 0.00 0.00 44.28 2.57
231 232 2.158813 GGCAAGGGAATCGTCCTCAATA 60.159 50.000 0.00 0.00 44.28 1.90
232 233 3.134458 GCAAGGGAATCGTCCTCAATAG 58.866 50.000 0.00 0.00 44.28 1.73
233 234 3.432326 GCAAGGGAATCGTCCTCAATAGT 60.432 47.826 0.00 0.00 44.28 2.12
234 235 4.122776 CAAGGGAATCGTCCTCAATAGTG 58.877 47.826 0.00 0.00 44.28 2.74
235 236 2.700897 AGGGAATCGTCCTCAATAGTGG 59.299 50.000 0.00 0.00 44.28 4.00
236 237 2.698797 GGGAATCGTCCTCAATAGTGGA 59.301 50.000 0.00 0.00 44.28 4.02
243 244 4.592485 GTCCTCAATAGTGGACGATGAT 57.408 45.455 0.00 0.00 45.35 2.45
244 245 4.950050 GTCCTCAATAGTGGACGATGATT 58.050 43.478 0.00 0.00 45.35 2.57
245 246 4.747108 GTCCTCAATAGTGGACGATGATTG 59.253 45.833 0.00 0.00 45.35 2.67
246 247 4.060900 CCTCAATAGTGGACGATGATTGG 58.939 47.826 0.00 0.00 0.00 3.16
247 248 4.060900 CTCAATAGTGGACGATGATTGGG 58.939 47.826 0.00 0.00 0.00 4.12
248 249 3.709141 TCAATAGTGGACGATGATTGGGA 59.291 43.478 0.00 0.00 0.00 4.37
249 250 4.060900 CAATAGTGGACGATGATTGGGAG 58.939 47.826 0.00 0.00 0.00 4.30
250 251 1.866015 AGTGGACGATGATTGGGAGA 58.134 50.000 0.00 0.00 0.00 3.71
251 252 1.759445 AGTGGACGATGATTGGGAGAG 59.241 52.381 0.00 0.00 0.00 3.20
252 253 1.123077 TGGACGATGATTGGGAGAGG 58.877 55.000 0.00 0.00 0.00 3.69
253 254 1.342975 TGGACGATGATTGGGAGAGGA 60.343 52.381 0.00 0.00 0.00 3.71
254 255 1.069358 GGACGATGATTGGGAGAGGAC 59.931 57.143 0.00 0.00 0.00 3.85
255 256 1.069358 GACGATGATTGGGAGAGGACC 59.931 57.143 0.00 0.00 0.00 4.46
256 257 1.123077 CGATGATTGGGAGAGGACCA 58.877 55.000 0.00 0.00 35.88 4.02
268 269 3.467226 GGACCAATCCTCCGGCGA 61.467 66.667 9.30 0.00 42.45 5.54
269 270 2.582436 GACCAATCCTCCGGCGAA 59.418 61.111 9.30 0.00 0.00 4.70
270 271 1.521681 GACCAATCCTCCGGCGAAG 60.522 63.158 9.30 0.00 0.00 3.79
271 272 1.956629 GACCAATCCTCCGGCGAAGA 61.957 60.000 9.30 1.52 0.00 2.87
272 273 1.521681 CCAATCCTCCGGCGAAGAC 60.522 63.158 9.30 0.00 0.00 3.01
273 274 1.218047 CAATCCTCCGGCGAAGACA 59.782 57.895 9.30 0.00 27.25 3.41
274 275 0.807667 CAATCCTCCGGCGAAGACAG 60.808 60.000 9.30 0.00 27.25 3.51
275 276 2.579684 AATCCTCCGGCGAAGACAGC 62.580 60.000 9.30 0.00 27.25 4.40
276 277 4.069232 CCTCCGGCGAAGACAGCA 62.069 66.667 9.30 0.00 27.25 4.41
277 278 2.185350 CTCCGGCGAAGACAGCAT 59.815 61.111 9.30 0.00 27.25 3.79
278 279 1.437573 CTCCGGCGAAGACAGCATA 59.562 57.895 9.30 0.00 27.25 3.14
279 280 0.179111 CTCCGGCGAAGACAGCATAA 60.179 55.000 9.30 0.00 27.25 1.90
280 281 0.179111 TCCGGCGAAGACAGCATAAG 60.179 55.000 9.30 0.00 27.25 1.73
281 282 1.638467 CGGCGAAGACAGCATAAGC 59.362 57.895 0.00 0.00 42.56 3.09
291 292 3.794270 GCATAAGCGCAACGAGGA 58.206 55.556 11.47 0.00 0.00 3.71
292 293 2.086510 GCATAAGCGCAACGAGGAA 58.913 52.632 11.47 0.00 0.00 3.36
293 294 0.446222 GCATAAGCGCAACGAGGAAA 59.554 50.000 11.47 0.00 0.00 3.13
294 295 1.529826 GCATAAGCGCAACGAGGAAAG 60.530 52.381 11.47 0.00 0.00 2.62
295 296 1.062587 CATAAGCGCAACGAGGAAAGG 59.937 52.381 11.47 0.00 0.00 3.11
296 297 0.319083 TAAGCGCAACGAGGAAAGGA 59.681 50.000 11.47 0.00 0.00 3.36
297 298 0.951040 AAGCGCAACGAGGAAAGGAG 60.951 55.000 11.47 0.00 0.00 3.69
298 299 1.374252 GCGCAACGAGGAAAGGAGA 60.374 57.895 0.30 0.00 0.00 3.71
299 300 1.627550 GCGCAACGAGGAAAGGAGAC 61.628 60.000 0.30 0.00 0.00 3.36
300 301 0.319555 CGCAACGAGGAAAGGAGACA 60.320 55.000 0.00 0.00 0.00 3.41
301 302 1.433534 GCAACGAGGAAAGGAGACAG 58.566 55.000 0.00 0.00 0.00 3.51
302 303 1.000955 GCAACGAGGAAAGGAGACAGA 59.999 52.381 0.00 0.00 0.00 3.41
303 304 2.548067 GCAACGAGGAAAGGAGACAGAA 60.548 50.000 0.00 0.00 0.00 3.02
304 305 3.321497 CAACGAGGAAAGGAGACAGAAG 58.679 50.000 0.00 0.00 0.00 2.85
305 306 1.273886 ACGAGGAAAGGAGACAGAAGC 59.726 52.381 0.00 0.00 0.00 3.86
306 307 1.404851 CGAGGAAAGGAGACAGAAGCC 60.405 57.143 0.00 0.00 0.00 4.35
307 308 0.610687 AGGAAAGGAGACAGAAGCCG 59.389 55.000 0.00 0.00 0.00 5.52
308 309 0.608640 GGAAAGGAGACAGAAGCCGA 59.391 55.000 0.00 0.00 0.00 5.54
309 310 1.002087 GGAAAGGAGACAGAAGCCGAA 59.998 52.381 0.00 0.00 0.00 4.30
310 311 2.550208 GGAAAGGAGACAGAAGCCGAAA 60.550 50.000 0.00 0.00 0.00 3.46
311 312 2.171341 AAGGAGACAGAAGCCGAAAC 57.829 50.000 0.00 0.00 0.00 2.78
312 313 0.038159 AGGAGACAGAAGCCGAAACG 60.038 55.000 0.00 0.00 0.00 3.60
322 323 4.084888 CCGAAACGGTCCGCTTGC 62.085 66.667 12.28 2.88 42.73 4.01
323 324 3.041940 CGAAACGGTCCGCTTGCT 61.042 61.111 12.28 0.00 0.00 3.91
324 325 2.556287 GAAACGGTCCGCTTGCTG 59.444 61.111 12.28 0.00 0.00 4.41
325 326 1.959226 GAAACGGTCCGCTTGCTGA 60.959 57.895 12.28 0.00 0.00 4.26
326 327 2.171489 GAAACGGTCCGCTTGCTGAC 62.171 60.000 12.28 8.34 0.00 3.51
328 329 4.717629 CGGTCCGCTTGCTGACGA 62.718 66.667 0.00 0.00 32.19 4.20
329 330 2.811317 GGTCCGCTTGCTGACGAG 60.811 66.667 10.19 0.00 32.19 4.18
334 335 3.482783 GCTTGCTGACGAGCCGAC 61.483 66.667 1.50 0.00 46.22 4.79
335 336 3.175240 CTTGCTGACGAGCCGACG 61.175 66.667 1.50 0.00 45.57 5.12
343 344 4.771356 CGAGCCGACGCCGAAGAA 62.771 66.667 0.00 0.00 38.22 2.52
344 345 2.881352 GAGCCGACGCCGAAGAAG 60.881 66.667 0.00 0.00 38.22 2.85
347 348 4.735132 CCGACGCCGAAGAAGCCA 62.735 66.667 0.00 0.00 38.22 4.75
348 349 2.736995 CGACGCCGAAGAAGCCAA 60.737 61.111 0.00 0.00 38.22 4.52
349 350 2.861006 GACGCCGAAGAAGCCAAC 59.139 61.111 0.00 0.00 0.00 3.77
350 351 1.668151 GACGCCGAAGAAGCCAACT 60.668 57.895 0.00 0.00 0.00 3.16
351 352 1.901650 GACGCCGAAGAAGCCAACTG 61.902 60.000 0.00 0.00 0.00 3.16
352 353 1.961277 CGCCGAAGAAGCCAACTGT 60.961 57.895 0.00 0.00 0.00 3.55
353 354 1.869690 GCCGAAGAAGCCAACTGTC 59.130 57.895 0.00 0.00 0.00 3.51
354 355 0.884704 GCCGAAGAAGCCAACTGTCA 60.885 55.000 0.00 0.00 0.00 3.58
355 356 0.868406 CCGAAGAAGCCAACTGTCAC 59.132 55.000 0.00 0.00 0.00 3.67
356 357 0.868406 CGAAGAAGCCAACTGTCACC 59.132 55.000 0.00 0.00 0.00 4.02
357 358 0.868406 GAAGAAGCCAACTGTCACCG 59.132 55.000 0.00 0.00 0.00 4.94
358 359 1.166531 AAGAAGCCAACTGTCACCGC 61.167 55.000 0.00 0.00 0.00 5.68
359 360 1.891919 GAAGCCAACTGTCACCGCA 60.892 57.895 0.00 0.00 0.00 5.69
360 361 1.444119 GAAGCCAACTGTCACCGCAA 61.444 55.000 0.00 0.00 0.00 4.85
361 362 1.034838 AAGCCAACTGTCACCGCAAA 61.035 50.000 0.00 0.00 0.00 3.68
362 363 1.299089 GCCAACTGTCACCGCAAAC 60.299 57.895 0.00 0.00 0.00 2.93
363 364 1.010125 CCAACTGTCACCGCAAACG 60.010 57.895 0.00 0.00 39.67 3.60
373 374 2.718731 CGCAAACGGAACTGCCAA 59.281 55.556 0.00 0.00 35.01 4.52
374 375 1.064946 CGCAAACGGAACTGCCAAA 59.935 52.632 0.00 0.00 35.01 3.28
375 376 1.206115 CGCAAACGGAACTGCCAAAC 61.206 55.000 0.00 0.00 35.01 2.93
376 377 0.102300 GCAAACGGAACTGCCAAACT 59.898 50.000 0.00 0.00 35.94 2.66
377 378 1.335496 GCAAACGGAACTGCCAAACTA 59.665 47.619 0.00 0.00 35.94 2.24
378 379 2.857104 GCAAACGGAACTGCCAAACTAC 60.857 50.000 0.00 0.00 35.94 2.73
379 380 1.601166 AACGGAACTGCCAAACTACC 58.399 50.000 0.00 0.00 35.94 3.18
380 381 0.470766 ACGGAACTGCCAAACTACCA 59.529 50.000 0.00 0.00 35.94 3.25
381 382 1.073284 ACGGAACTGCCAAACTACCAT 59.927 47.619 0.00 0.00 35.94 3.55
382 383 1.468520 CGGAACTGCCAAACTACCATG 59.531 52.381 0.00 0.00 35.94 3.66
383 384 2.514803 GGAACTGCCAAACTACCATGT 58.485 47.619 0.00 0.00 36.34 3.21
384 385 3.681593 GGAACTGCCAAACTACCATGTA 58.318 45.455 0.00 0.00 36.34 2.29
385 386 3.689649 GGAACTGCCAAACTACCATGTAG 59.310 47.826 0.00 0.00 36.34 2.74
386 387 2.711542 ACTGCCAAACTACCATGTAGC 58.288 47.619 1.28 0.00 0.00 3.58
387 388 1.665679 CTGCCAAACTACCATGTAGCG 59.334 52.381 1.28 0.00 0.00 4.26
388 389 1.014352 GCCAAACTACCATGTAGCGG 58.986 55.000 1.28 1.87 0.00 5.52
389 390 1.014352 CCAAACTACCATGTAGCGGC 58.986 55.000 1.28 0.00 0.00 6.53
390 391 0.650512 CAAACTACCATGTAGCGGCG 59.349 55.000 0.51 0.51 0.00 6.46
391 392 1.087771 AAACTACCATGTAGCGGCGC 61.088 55.000 26.86 26.86 0.00 6.53
392 393 3.030308 CTACCATGTAGCGGCGCG 61.030 66.667 27.59 13.64 0.00 6.86
393 394 3.768185 CTACCATGTAGCGGCGCGT 62.768 63.158 27.59 19.00 0.00 6.01
394 395 3.359515 TACCATGTAGCGGCGCGTT 62.360 57.895 27.59 13.08 0.00 4.84
395 396 4.222589 CCATGTAGCGGCGCGTTG 62.223 66.667 27.59 20.52 0.00 4.10
396 397 3.487202 CATGTAGCGGCGCGTTGT 61.487 61.111 27.59 11.82 0.00 3.32
397 398 2.162120 CATGTAGCGGCGCGTTGTA 61.162 57.895 27.59 10.64 0.00 2.41
398 399 1.876714 ATGTAGCGGCGCGTTGTAG 60.877 57.895 27.59 0.00 0.00 2.74
399 400 3.252484 GTAGCGGCGCGTTGTAGG 61.252 66.667 27.59 0.00 0.00 3.18
400 401 3.442167 TAGCGGCGCGTTGTAGGA 61.442 61.111 27.59 2.47 0.00 2.94
401 402 2.992273 TAGCGGCGCGTTGTAGGAA 61.992 57.895 27.59 1.61 0.00 3.36
402 403 2.877360 TAGCGGCGCGTTGTAGGAAG 62.877 60.000 27.59 0.00 0.00 3.46
403 404 3.186047 CGGCGCGTTGTAGGAAGG 61.186 66.667 8.43 0.00 0.00 3.46
404 405 3.497031 GGCGCGTTGTAGGAAGGC 61.497 66.667 8.43 0.00 0.00 4.35
405 406 3.497031 GCGCGTTGTAGGAAGGCC 61.497 66.667 8.43 0.00 0.00 5.19
406 407 2.047655 CGCGTTGTAGGAAGGCCA 60.048 61.111 5.01 0.00 36.29 5.36
407 408 2.388232 CGCGTTGTAGGAAGGCCAC 61.388 63.158 5.01 0.00 36.29 5.01
408 409 2.038837 GCGTTGTAGGAAGGCCACC 61.039 63.158 5.01 8.40 36.29 4.61
409 410 1.373435 CGTTGTAGGAAGGCCACCA 59.627 57.895 18.84 4.84 36.29 4.17
410 411 0.953960 CGTTGTAGGAAGGCCACCAC 60.954 60.000 18.84 14.67 36.29 4.16
411 412 0.109723 GTTGTAGGAAGGCCACCACA 59.890 55.000 18.84 16.52 36.29 4.17
412 413 0.109723 TTGTAGGAAGGCCACCACAC 59.890 55.000 18.84 15.64 36.29 3.82
413 414 1.057275 TGTAGGAAGGCCACCACACA 61.057 55.000 18.84 17.52 36.29 3.72
414 415 0.605589 GTAGGAAGGCCACCACACAC 60.606 60.000 18.84 8.75 36.29 3.82
415 416 0.766674 TAGGAAGGCCACCACACACT 60.767 55.000 18.84 2.58 36.29 3.55
416 417 1.898574 GGAAGGCCACCACACACTG 60.899 63.158 5.01 0.00 0.00 3.66
418 419 2.337879 GAAGGCCACCACACACTGGA 62.338 60.000 5.01 0.00 43.95 3.86
419 420 2.594592 GGCCACCACACACTGGAC 60.595 66.667 0.00 0.00 43.95 4.02
420 421 2.594592 GCCACCACACACTGGACC 60.595 66.667 0.00 0.00 43.95 4.46
421 422 3.120086 GCCACCACACACTGGACCT 62.120 63.158 0.00 0.00 43.95 3.85
422 423 1.071471 CCACCACACACTGGACCTC 59.929 63.158 0.00 0.00 43.95 3.85
423 424 1.695114 CCACCACACACTGGACCTCA 61.695 60.000 0.00 0.00 43.95 3.86
424 425 0.532862 CACCACACACTGGACCTCAC 60.533 60.000 0.00 0.00 43.95 3.51
425 426 1.071471 CCACACACTGGACCTCACC 59.929 63.158 0.00 0.00 43.95 4.02
426 427 1.410850 CCACACACTGGACCTCACCT 61.411 60.000 0.00 0.00 43.95 4.00
427 428 0.469917 CACACACTGGACCTCACCTT 59.530 55.000 0.00 0.00 0.00 3.50
428 429 0.469917 ACACACTGGACCTCACCTTG 59.530 55.000 0.00 0.00 0.00 3.61
429 430 0.886490 CACACTGGACCTCACCTTGC 60.886 60.000 0.00 0.00 0.00 4.01
430 431 1.302832 CACTGGACCTCACCTTGCC 60.303 63.158 0.00 0.00 0.00 4.52
431 432 1.770110 ACTGGACCTCACCTTGCCA 60.770 57.895 0.00 0.00 0.00 4.92
432 433 1.136329 ACTGGACCTCACCTTGCCAT 61.136 55.000 0.00 0.00 0.00 4.40
433 434 0.393537 CTGGACCTCACCTTGCCATC 60.394 60.000 0.00 0.00 0.00 3.51
434 435 1.077429 GGACCTCACCTTGCCATCC 60.077 63.158 0.00 0.00 0.00 3.51
435 436 1.450312 GACCTCACCTTGCCATCCG 60.450 63.158 0.00 0.00 0.00 4.18
436 437 2.825836 CCTCACCTTGCCATCCGC 60.826 66.667 0.00 0.00 38.31 5.54
437 438 2.825836 CTCACCTTGCCATCCGCC 60.826 66.667 0.00 0.00 36.24 6.13
438 439 4.424711 TCACCTTGCCATCCGCCC 62.425 66.667 0.00 0.00 36.24 6.13
451 452 4.077184 CGCCCCACGGTTAGAGCA 62.077 66.667 0.00 0.00 38.44 4.26
452 453 2.125106 GCCCCACGGTTAGAGCAG 60.125 66.667 0.00 0.00 0.00 4.24
453 454 2.125106 CCCCACGGTTAGAGCAGC 60.125 66.667 0.00 0.00 0.00 5.25
454 455 2.662596 CCCACGGTTAGAGCAGCA 59.337 61.111 0.00 0.00 0.00 4.41
455 456 1.003839 CCCACGGTTAGAGCAGCAA 60.004 57.895 0.00 0.00 0.00 3.91
456 457 1.298859 CCCACGGTTAGAGCAGCAAC 61.299 60.000 0.00 0.00 0.00 4.17
457 458 1.298859 CCACGGTTAGAGCAGCAACC 61.299 60.000 3.45 3.45 40.72 3.77
458 459 0.602638 CACGGTTAGAGCAGCAACCA 60.603 55.000 12.41 0.00 43.70 3.67
459 460 0.602905 ACGGTTAGAGCAGCAACCAC 60.603 55.000 12.41 0.00 43.70 4.16
460 461 1.626654 CGGTTAGAGCAGCAACCACG 61.627 60.000 12.41 0.00 43.70 4.94
461 462 1.497722 GTTAGAGCAGCAACCACGC 59.502 57.895 0.00 0.00 0.00 5.34
462 463 1.671054 TTAGAGCAGCAACCACGCC 60.671 57.895 0.00 0.00 0.00 5.68
463 464 2.390306 TTAGAGCAGCAACCACGCCA 62.390 55.000 0.00 0.00 0.00 5.69
464 465 2.390306 TAGAGCAGCAACCACGCCAA 62.390 55.000 0.00 0.00 0.00 4.52
465 466 3.259425 GAGCAGCAACCACGCCAAG 62.259 63.158 0.00 0.00 0.00 3.61
467 468 3.289834 CAGCAACCACGCCAAGCT 61.290 61.111 0.00 0.00 35.63 3.74
468 469 3.289834 AGCAACCACGCCAAGCTG 61.290 61.111 0.00 0.00 33.67 4.24
469 470 3.595758 GCAACCACGCCAAGCTGT 61.596 61.111 0.00 0.00 0.00 4.40
470 471 3.119193 CAACCACGCCAAGCTGTT 58.881 55.556 0.00 0.00 0.00 3.16
471 472 1.299316 CAACCACGCCAAGCTGTTG 60.299 57.895 0.00 0.00 0.00 3.33
472 473 3.137637 AACCACGCCAAGCTGTTGC 62.138 57.895 0.00 0.00 40.05 4.17
473 474 4.347453 CCACGCCAAGCTGTTGCC 62.347 66.667 0.00 0.00 40.80 4.52
474 475 4.347453 CACGCCAAGCTGTTGCCC 62.347 66.667 0.00 0.00 40.80 5.36
477 478 3.233231 GCCAAGCTGTTGCCCCAA 61.233 61.111 0.00 0.00 40.80 4.12
478 479 2.736531 CCAAGCTGTTGCCCCAAC 59.263 61.111 1.33 1.33 43.78 3.77
479 480 2.736531 CAAGCTGTTGCCCCAACC 59.263 61.111 5.72 0.00 42.96 3.77
480 481 2.524148 AAGCTGTTGCCCCAACCC 60.524 61.111 5.72 0.00 42.96 4.11
481 482 4.974721 AGCTGTTGCCCCAACCCG 62.975 66.667 5.72 0.00 42.96 5.28
503 504 4.514585 ACCTGCCGGCCACAACAA 62.515 61.111 26.77 1.11 0.00 2.83
504 505 3.977244 CCTGCCGGCCACAACAAC 61.977 66.667 26.77 0.00 0.00 3.32
505 506 3.215568 CTGCCGGCCACAACAACA 61.216 61.111 26.77 0.00 0.00 3.33
506 507 2.755876 TGCCGGCCACAACAACAA 60.756 55.556 26.77 0.00 0.00 2.83
507 508 2.279186 GCCGGCCACAACAACAAC 60.279 61.111 18.11 0.00 0.00 3.32
508 509 3.069980 GCCGGCCACAACAACAACA 62.070 57.895 18.11 0.00 0.00 3.33
509 510 1.065600 CCGGCCACAACAACAACAG 59.934 57.895 2.24 0.00 0.00 3.16
510 511 1.065600 CGGCCACAACAACAACAGG 59.934 57.895 2.24 0.00 0.00 4.00
511 512 1.441311 GGCCACAACAACAACAGGG 59.559 57.895 0.00 0.00 0.00 4.45
512 513 1.040339 GGCCACAACAACAACAGGGA 61.040 55.000 0.00 0.00 0.00 4.20
513 514 0.102300 GCCACAACAACAACAGGGAC 59.898 55.000 0.00 0.00 0.00 4.46
514 515 1.762708 CCACAACAACAACAGGGACT 58.237 50.000 0.00 0.00 43.88 3.85
515 516 1.676006 CCACAACAACAACAGGGACTC 59.324 52.381 0.00 0.00 34.60 3.36
516 517 1.676006 CACAACAACAACAGGGACTCC 59.324 52.381 0.00 0.00 34.60 3.85
517 518 1.318576 CAACAACAACAGGGACTCCC 58.681 55.000 5.90 5.90 45.90 4.30
526 527 3.551407 GGGACTCCCAGATCCGCC 61.551 72.222 9.53 0.00 44.65 6.13
527 528 2.764128 GGACTCCCAGATCCGCCA 60.764 66.667 0.00 0.00 0.00 5.69
528 529 2.801631 GGACTCCCAGATCCGCCAG 61.802 68.421 0.00 0.00 0.00 4.85
529 530 3.453070 GACTCCCAGATCCGCCAGC 62.453 68.421 0.00 0.00 0.00 4.85
530 531 3.473647 CTCCCAGATCCGCCAGCA 61.474 66.667 0.00 0.00 0.00 4.41
531 532 3.457625 CTCCCAGATCCGCCAGCAG 62.458 68.421 0.00 0.00 0.00 4.24
533 534 4.478371 CCAGATCCGCCAGCAGCA 62.478 66.667 0.00 0.00 44.04 4.41
534 535 3.200593 CAGATCCGCCAGCAGCAC 61.201 66.667 0.00 0.00 44.04 4.40
535 536 4.827087 AGATCCGCCAGCAGCACG 62.827 66.667 0.00 0.00 44.04 5.34
562 563 4.506255 CCCCGGAGCCCCATGAAC 62.506 72.222 0.73 0.00 0.00 3.18
563 564 3.727258 CCCGGAGCCCCATGAACA 61.727 66.667 0.73 0.00 0.00 3.18
564 565 2.124570 CCGGAGCCCCATGAACAG 60.125 66.667 0.00 0.00 0.00 3.16
565 566 2.124570 CGGAGCCCCATGAACAGG 60.125 66.667 0.00 0.00 0.00 4.00
570 571 3.727258 CCCCATGAACAGGCCCGA 61.727 66.667 0.00 0.00 0.00 5.14
571 572 2.124570 CCCATGAACAGGCCCGAG 60.125 66.667 0.00 0.00 0.00 4.63
572 573 2.671070 CCATGAACAGGCCCGAGT 59.329 61.111 0.00 0.00 0.00 4.18
573 574 1.746615 CCATGAACAGGCCCGAGTG 60.747 63.158 0.00 0.00 0.00 3.51
574 575 2.045926 ATGAACAGGCCCGAGTGC 60.046 61.111 0.00 0.00 0.00 4.40
599 600 1.446272 CCGCCGAACAGAAGGAGAC 60.446 63.158 0.00 0.00 0.00 3.36
616 617 3.927555 ACGAAATGGGTCATCGTGT 57.072 47.368 0.00 0.00 46.90 4.49
620 621 0.611200 AAATGGGTCATCGTGTCGGA 59.389 50.000 0.00 0.00 0.00 4.55
631 632 0.736325 CGTGTCGGAGTTGGCCTTAG 60.736 60.000 3.32 0.00 0.00 2.18
650 651 9.953565 GGCCTTAGTCCAACATATTATGTATTA 57.046 33.333 9.67 0.00 44.07 0.98
847 849 4.554036 GATCCGGAGCACCAGCCC 62.554 72.222 16.44 0.00 43.56 5.19
866 868 1.340308 CCATCCACCAATCACAGCTCA 60.340 52.381 0.00 0.00 0.00 4.26
867 869 2.651455 CATCCACCAATCACAGCTCAT 58.349 47.619 0.00 0.00 0.00 2.90
920 932 1.000359 TCTCCGCCTCCTCACATCA 60.000 57.895 0.00 0.00 0.00 3.07
972 984 1.686110 AGCCTAACCCCACCTCTCG 60.686 63.158 0.00 0.00 0.00 4.04
973 985 1.684734 GCCTAACCCCACCTCTCGA 60.685 63.158 0.00 0.00 0.00 4.04
974 986 1.677637 GCCTAACCCCACCTCTCGAG 61.678 65.000 5.93 5.93 0.00 4.04
975 987 0.324460 CCTAACCCCACCTCTCGAGT 60.324 60.000 13.13 0.00 0.00 4.18
976 988 1.104630 CTAACCCCACCTCTCGAGTC 58.895 60.000 13.13 0.00 0.00 3.36
977 989 0.702902 TAACCCCACCTCTCGAGTCT 59.297 55.000 13.13 0.00 0.00 3.24
978 990 0.612453 AACCCCACCTCTCGAGTCTC 60.612 60.000 13.13 0.00 0.00 3.36
979 991 2.115911 CCCCACCTCTCGAGTCTCG 61.116 68.421 16.33 16.33 42.10 4.04
1123 1161 3.556004 CGAGAAGAAGGGCAAGAAGAAGT 60.556 47.826 0.00 0.00 0.00 3.01
1450 2203 2.821546 TGGTCGCATTCTGTATGTAGC 58.178 47.619 0.00 0.00 36.57 3.58
1484 2237 8.226448 CAGTTTGTGTTCTGAAGATGTTATCTC 58.774 37.037 0.00 0.00 39.08 2.75
1495 2248 7.547227 TGAAGATGTTATCTCGTGAGAATCAA 58.453 34.615 3.31 0.00 43.42 2.57
1534 2418 7.010275 GTCGGTCTGAAGAAATAGTAATGTTCC 59.990 40.741 0.00 0.00 0.00 3.62
1655 2612 1.400494 GAACTGTCCTTTGTGTTGCGT 59.600 47.619 0.00 0.00 0.00 5.24
1656 2613 1.459450 ACTGTCCTTTGTGTTGCGTT 58.541 45.000 0.00 0.00 0.00 4.84
1657 2614 1.400494 ACTGTCCTTTGTGTTGCGTTC 59.600 47.619 0.00 0.00 0.00 3.95
1658 2615 0.736053 TGTCCTTTGTGTTGCGTTCC 59.264 50.000 0.00 0.00 0.00 3.62
1806 2810 2.809601 CACTGACGCGTAGGCACC 60.810 66.667 13.97 0.00 39.92 5.01
1817 2822 2.353406 GCGTAGGCACCTGTAGAAGAAA 60.353 50.000 1.75 0.00 39.62 2.52
1832 2837 5.972107 AGAAGAAATTGTGTCAAGATGGG 57.028 39.130 0.00 0.00 0.00 4.00
1839 2844 7.616935 AGAAATTGTGTCAAGATGGGTGATAAT 59.383 33.333 0.00 0.00 0.00 1.28
1889 2894 2.479730 GCAAGCTCCATCTGATGCAAAG 60.480 50.000 12.17 9.66 34.10 2.77
1908 2913 0.954452 GGGAGTTTTGGTGAGTGCAG 59.046 55.000 0.00 0.00 0.00 4.41
1921 2926 4.201891 GGTGAGTGCAGTTGATGAATCATC 60.202 45.833 15.86 15.86 40.88 2.92
1933 2938 2.996168 GAATCATCCCGGGTCAGGCG 62.996 65.000 22.86 3.78 0.00 5.52
1949 2954 3.006430 TCAGGCGAGAATGAACACTGTAA 59.994 43.478 0.00 0.00 0.00 2.41
2000 3037 6.045318 GCAAAGAGTATCAGTTCAGAGCATA 58.955 40.000 0.00 0.00 37.82 3.14
2023 3062 5.779922 AGTGAAGTAGCACTAAAACGATCA 58.220 37.500 0.00 0.00 46.67 2.92
2024 3063 5.864474 AGTGAAGTAGCACTAAAACGATCAG 59.136 40.000 0.00 0.00 46.67 2.90
2107 3161 3.261897 ACAGACAATTGTACCTGAGAGGG 59.738 47.826 25.84 6.45 40.58 4.30
2181 3235 1.463674 AAGGTGCATCGATTTGACCC 58.536 50.000 11.84 2.06 0.00 4.46
2182 3236 0.394352 AGGTGCATCGATTTGACCCC 60.394 55.000 11.84 0.87 0.00 4.95
2183 3237 1.384222 GGTGCATCGATTTGACCCCC 61.384 60.000 0.00 0.00 0.00 5.40
2226 3280 2.228103 CCCGTTTAGAAGAAGTTTGGGC 59.772 50.000 0.00 0.00 0.00 5.36
2239 3293 2.035832 AGTTTGGGCAAAAATGGTCTCG 59.964 45.455 0.00 0.00 31.33 4.04
2247 3301 4.321230 GGCAAAAATGGTCTCGAACAGATT 60.321 41.667 0.00 0.00 32.08 2.40
2249 3303 5.393962 CAAAAATGGTCTCGAACAGATTCC 58.606 41.667 0.00 0.00 32.08 3.01
2258 3312 4.862574 TCTCGAACAGATTCCGTAAACATG 59.137 41.667 0.00 0.00 0.00 3.21
2307 3361 7.872113 ATTTGACATGAATTTCCCTCTAGTC 57.128 36.000 0.00 0.00 0.00 2.59
2308 3362 5.359194 TGACATGAATTTCCCTCTAGTCC 57.641 43.478 0.00 0.00 0.00 3.85
2324 3378 6.039415 TCTAGTCCAGGGGAAGTATTACAT 57.961 41.667 0.00 0.00 31.38 2.29
2346 3400 5.113446 TCCCGTAATATTTTGGCCAACTA 57.887 39.130 20.35 13.49 0.00 2.24
2362 3416 3.222603 CAACTAAAACTTCAGGCCACCT 58.777 45.455 5.01 0.00 0.00 4.00
2363 3417 3.141767 ACTAAAACTTCAGGCCACCTC 57.858 47.619 5.01 0.00 0.00 3.85
2364 3418 2.076863 CTAAAACTTCAGGCCACCTCG 58.923 52.381 5.01 0.00 0.00 4.63
2365 3419 1.172812 AAAACTTCAGGCCACCTCGC 61.173 55.000 5.01 0.00 0.00 5.03
2386 3440 3.594775 TGCAACGCTGGGCAGTTG 61.595 61.111 16.39 16.39 41.75 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.605319 TAGTTTTGCGCCTCAGGTGG 60.605 55.000 6.34 0.00 33.18 4.61
1 2 0.517316 GTAGTTTTGCGCCTCAGGTG 59.483 55.000 4.18 0.00 36.10 4.00
2 3 0.949105 CGTAGTTTTGCGCCTCAGGT 60.949 55.000 4.18 0.00 0.00 4.00
3 4 0.669318 TCGTAGTTTTGCGCCTCAGG 60.669 55.000 4.18 0.00 32.07 3.86
4 5 0.438830 GTCGTAGTTTTGCGCCTCAG 59.561 55.000 4.18 0.00 32.07 3.35
5 6 1.279527 CGTCGTAGTTTTGCGCCTCA 61.280 55.000 4.18 0.00 32.07 3.86
6 7 1.005294 TCGTCGTAGTTTTGCGCCTC 61.005 55.000 4.18 0.00 32.07 4.70
7 8 1.007038 TCGTCGTAGTTTTGCGCCT 60.007 52.632 4.18 0.00 32.07 5.52
8 9 1.129209 GTCGTCGTAGTTTTGCGCC 59.871 57.895 4.18 0.00 32.07 6.53
9 10 1.129209 GGTCGTCGTAGTTTTGCGC 59.871 57.895 0.00 0.00 32.07 6.09
10 11 0.854062 TTGGTCGTCGTAGTTTTGCG 59.146 50.000 0.00 0.00 0.00 4.85
11 12 2.540931 TCTTTGGTCGTCGTAGTTTTGC 59.459 45.455 0.00 0.00 0.00 3.68
12 13 4.046462 TCTCTTTGGTCGTCGTAGTTTTG 58.954 43.478 0.00 0.00 0.00 2.44
13 14 4.047142 GTCTCTTTGGTCGTCGTAGTTTT 58.953 43.478 0.00 0.00 0.00 2.43
14 15 3.317430 AGTCTCTTTGGTCGTCGTAGTTT 59.683 43.478 0.00 0.00 0.00 2.66
15 16 2.883386 AGTCTCTTTGGTCGTCGTAGTT 59.117 45.455 0.00 0.00 0.00 2.24
16 17 2.502295 AGTCTCTTTGGTCGTCGTAGT 58.498 47.619 0.00 0.00 0.00 2.73
17 18 3.485546 GCTAGTCTCTTTGGTCGTCGTAG 60.486 52.174 0.00 0.00 0.00 3.51
18 19 2.417933 GCTAGTCTCTTTGGTCGTCGTA 59.582 50.000 0.00 0.00 0.00 3.43
19 20 1.199558 GCTAGTCTCTTTGGTCGTCGT 59.800 52.381 0.00 0.00 0.00 4.34
20 21 1.790838 CGCTAGTCTCTTTGGTCGTCG 60.791 57.143 0.00 0.00 0.00 5.12
21 22 1.199558 ACGCTAGTCTCTTTGGTCGTC 59.800 52.381 0.00 0.00 0.00 4.20
22 23 1.245732 ACGCTAGTCTCTTTGGTCGT 58.754 50.000 0.00 0.00 0.00 4.34
23 24 3.482722 TTACGCTAGTCTCTTTGGTCG 57.517 47.619 0.00 0.00 0.00 4.79
24 25 4.082354 TCCTTTACGCTAGTCTCTTTGGTC 60.082 45.833 0.00 0.00 0.00 4.02
25 26 3.830755 TCCTTTACGCTAGTCTCTTTGGT 59.169 43.478 0.00 0.00 0.00 3.67
26 27 4.174762 GTCCTTTACGCTAGTCTCTTTGG 58.825 47.826 0.00 0.00 0.00 3.28
27 28 4.174762 GGTCCTTTACGCTAGTCTCTTTG 58.825 47.826 0.00 0.00 0.00 2.77
28 29 3.195182 GGGTCCTTTACGCTAGTCTCTTT 59.805 47.826 0.00 0.00 38.01 2.52
29 30 2.759535 GGGTCCTTTACGCTAGTCTCTT 59.240 50.000 0.00 0.00 38.01 2.85
30 31 2.377073 GGGTCCTTTACGCTAGTCTCT 58.623 52.381 0.00 0.00 38.01 3.10
31 32 2.867287 GGGTCCTTTACGCTAGTCTC 57.133 55.000 0.00 0.00 38.01 3.36
38 39 2.014857 GGAAATGAGGGTCCTTTACGC 58.985 52.381 0.00 0.00 41.25 4.42
39 40 2.026636 TGGGAAATGAGGGTCCTTTACG 60.027 50.000 0.00 0.00 34.10 3.18
40 41 3.353557 GTGGGAAATGAGGGTCCTTTAC 58.646 50.000 0.00 0.00 34.10 2.01
41 42 2.310647 GGTGGGAAATGAGGGTCCTTTA 59.689 50.000 0.00 0.00 34.10 1.85
42 43 1.077169 GGTGGGAAATGAGGGTCCTTT 59.923 52.381 0.00 0.00 34.10 3.11
43 44 0.704664 GGTGGGAAATGAGGGTCCTT 59.295 55.000 0.00 0.00 34.10 3.36
44 45 1.214992 GGGTGGGAAATGAGGGTCCT 61.215 60.000 0.00 0.00 34.10 3.85
45 46 1.306633 GGGTGGGAAATGAGGGTCC 59.693 63.158 0.00 0.00 0.00 4.46
46 47 0.631212 ATGGGTGGGAAATGAGGGTC 59.369 55.000 0.00 0.00 0.00 4.46
47 48 0.336048 CATGGGTGGGAAATGAGGGT 59.664 55.000 0.00 0.00 0.00 4.34
48 49 0.397535 CCATGGGTGGGAAATGAGGG 60.398 60.000 2.85 0.00 42.11 4.30
49 50 3.212377 CCATGGGTGGGAAATGAGG 57.788 57.895 2.85 0.00 42.11 3.86
88 89 1.626356 ATCTGGACGACATGTGGGGG 61.626 60.000 12.78 0.00 0.00 5.40
89 90 0.179073 GATCTGGACGACATGTGGGG 60.179 60.000 12.78 0.00 0.00 4.96
90 91 0.826715 AGATCTGGACGACATGTGGG 59.173 55.000 12.78 2.41 0.00 4.61
91 92 1.931906 CAGATCTGGACGACATGTGG 58.068 55.000 15.38 4.15 0.00 4.17
103 104 2.113433 GCAGTGGCAGCCAGATCTG 61.113 63.158 16.83 19.67 40.72 2.90
104 105 2.271497 GCAGTGGCAGCCAGATCT 59.729 61.111 16.83 5.67 40.72 2.75
127 128 0.389948 CATTATCCGGGAGCGGTAGC 60.390 60.000 0.00 0.00 45.58 3.58
128 129 0.246635 CCATTATCCGGGAGCGGTAG 59.753 60.000 0.00 0.00 0.00 3.18
129 130 0.178955 TCCATTATCCGGGAGCGGTA 60.179 55.000 0.00 0.00 0.00 4.02
130 131 1.458777 TCCATTATCCGGGAGCGGT 60.459 57.895 0.00 0.00 0.00 5.68
131 132 1.004918 GTCCATTATCCGGGAGCGG 60.005 63.158 0.00 0.12 32.85 5.52
132 133 1.372997 CGTCCATTATCCGGGAGCG 60.373 63.158 0.00 0.00 32.85 5.03
133 134 0.391597 TTCGTCCATTATCCGGGAGC 59.608 55.000 0.00 0.00 32.85 4.70
134 135 1.687123 AGTTCGTCCATTATCCGGGAG 59.313 52.381 0.00 0.00 32.85 4.30
135 136 1.684983 GAGTTCGTCCATTATCCGGGA 59.315 52.381 0.00 0.00 0.00 5.14
136 137 1.411246 TGAGTTCGTCCATTATCCGGG 59.589 52.381 0.00 0.00 0.00 5.73
137 138 2.470821 GTGAGTTCGTCCATTATCCGG 58.529 52.381 0.00 0.00 0.00 5.14
138 139 2.159156 TGGTGAGTTCGTCCATTATCCG 60.159 50.000 0.00 0.00 0.00 4.18
139 140 3.118738 ACTGGTGAGTTCGTCCATTATCC 60.119 47.826 0.00 0.00 0.00 2.59
140 141 3.865745 CACTGGTGAGTTCGTCCATTATC 59.134 47.826 0.00 0.00 0.00 1.75
141 142 3.369471 CCACTGGTGAGTTCGTCCATTAT 60.369 47.826 1.93 0.00 0.00 1.28
142 143 2.028476 CCACTGGTGAGTTCGTCCATTA 60.028 50.000 1.93 0.00 0.00 1.90
143 144 1.270839 CCACTGGTGAGTTCGTCCATT 60.271 52.381 1.93 0.00 0.00 3.16
144 145 0.321671 CCACTGGTGAGTTCGTCCAT 59.678 55.000 1.93 0.00 0.00 3.41
145 146 1.745890 CCACTGGTGAGTTCGTCCA 59.254 57.895 1.93 0.00 0.00 4.02
146 147 1.668151 GCCACTGGTGAGTTCGTCC 60.668 63.158 1.93 0.00 0.00 4.79
147 148 1.069090 TGCCACTGGTGAGTTCGTC 59.931 57.895 1.93 0.00 0.00 4.20
148 149 1.227556 GTGCCACTGGTGAGTTCGT 60.228 57.895 1.93 0.00 0.00 3.85
149 150 1.227527 TGTGCCACTGGTGAGTTCG 60.228 57.895 1.93 0.00 0.00 3.95
150 151 1.166531 GGTGTGCCACTGGTGAGTTC 61.167 60.000 1.93 0.00 34.40 3.01
151 152 1.152963 GGTGTGCCACTGGTGAGTT 60.153 57.895 1.93 0.00 34.40 3.01
152 153 2.374525 TGGTGTGCCACTGGTGAGT 61.375 57.895 1.93 0.00 40.46 3.41
153 154 2.510411 TGGTGTGCCACTGGTGAG 59.490 61.111 1.93 0.00 40.46 3.51
161 162 0.888736 CTTCGATTGGTGGTGTGCCA 60.889 55.000 0.00 0.00 43.73 4.92
162 163 1.586154 CCTTCGATTGGTGGTGTGCC 61.586 60.000 0.00 0.00 0.00 5.01
163 164 1.586154 CCCTTCGATTGGTGGTGTGC 61.586 60.000 4.59 0.00 0.00 4.57
164 165 0.036164 TCCCTTCGATTGGTGGTGTG 59.964 55.000 4.59 0.00 0.00 3.82
165 166 0.036306 GTCCCTTCGATTGGTGGTGT 59.964 55.000 4.59 0.00 0.00 4.16
166 167 1.019278 CGTCCCTTCGATTGGTGGTG 61.019 60.000 4.59 0.00 0.00 4.17
167 168 1.295423 CGTCCCTTCGATTGGTGGT 59.705 57.895 4.59 0.00 0.00 4.16
168 169 2.106683 GCGTCCCTTCGATTGGTGG 61.107 63.158 4.59 0.00 0.00 4.61
169 170 0.953471 TTGCGTCCCTTCGATTGGTG 60.953 55.000 4.59 0.00 0.00 4.17
170 171 0.953960 GTTGCGTCCCTTCGATTGGT 60.954 55.000 4.59 0.00 0.00 3.67
171 172 1.794222 GTTGCGTCCCTTCGATTGG 59.206 57.895 0.00 0.00 0.00 3.16
172 173 1.011968 TCGTTGCGTCCCTTCGATTG 61.012 55.000 0.00 0.00 0.00 2.67
173 174 0.108329 ATCGTTGCGTCCCTTCGATT 60.108 50.000 0.00 0.00 37.88 3.34
174 175 0.806102 CATCGTTGCGTCCCTTCGAT 60.806 55.000 0.00 0.00 40.95 3.59
175 176 1.445410 CATCGTTGCGTCCCTTCGA 60.445 57.895 0.00 0.00 35.14 3.71
176 177 0.806102 ATCATCGTTGCGTCCCTTCG 60.806 55.000 0.00 0.00 0.00 3.79
177 178 1.327764 GAATCATCGTTGCGTCCCTTC 59.672 52.381 0.00 0.00 0.00 3.46
178 179 1.369625 GAATCATCGTTGCGTCCCTT 58.630 50.000 0.00 0.00 0.00 3.95
179 180 0.462047 GGAATCATCGTTGCGTCCCT 60.462 55.000 4.68 0.00 0.00 4.20
180 181 0.462047 AGGAATCATCGTTGCGTCCC 60.462 55.000 10.13 0.00 0.00 4.46
181 182 1.062587 CAAGGAATCATCGTTGCGTCC 59.937 52.381 7.01 7.01 42.47 4.79
182 183 1.062587 CCAAGGAATCATCGTTGCGTC 59.937 52.381 5.90 0.00 45.58 5.19
183 184 1.086696 CCAAGGAATCATCGTTGCGT 58.913 50.000 5.90 0.00 45.58 5.24
184 185 0.248215 GCCAAGGAATCATCGTTGCG 60.248 55.000 5.90 2.19 45.58 4.85
185 186 0.101219 GGCCAAGGAATCATCGTTGC 59.899 55.000 0.00 2.85 45.58 4.17
186 187 0.740737 GGGCCAAGGAATCATCGTTG 59.259 55.000 4.39 4.70 46.18 4.10
187 188 0.625849 AGGGCCAAGGAATCATCGTT 59.374 50.000 6.18 0.00 34.11 3.85
188 189 0.181350 GAGGGCCAAGGAATCATCGT 59.819 55.000 6.18 0.00 0.00 3.73
189 190 0.471617 AGAGGGCCAAGGAATCATCG 59.528 55.000 6.18 0.00 0.00 3.84
190 191 2.305009 CAAGAGGGCCAAGGAATCATC 58.695 52.381 6.18 0.00 0.00 2.92
191 192 1.063417 CCAAGAGGGCCAAGGAATCAT 60.063 52.381 6.18 0.00 0.00 2.45
192 193 0.332632 CCAAGAGGGCCAAGGAATCA 59.667 55.000 6.18 0.00 0.00 2.57
193 194 3.197664 CCAAGAGGGCCAAGGAATC 57.802 57.895 6.18 0.00 0.00 2.52
204 205 0.035056 ACGATTCCCTTGCCAAGAGG 60.035 55.000 5.89 5.84 38.23 3.69
205 206 1.373570 GACGATTCCCTTGCCAAGAG 58.626 55.000 5.89 0.00 0.00 2.85
206 207 0.035439 GGACGATTCCCTTGCCAAGA 60.035 55.000 5.89 0.00 35.57 3.02
207 208 0.035056 AGGACGATTCCCTTGCCAAG 60.035 55.000 0.00 0.00 44.10 3.61
208 209 0.035439 GAGGACGATTCCCTTGCCAA 60.035 55.000 0.00 0.00 44.10 4.52
209 210 1.198094 TGAGGACGATTCCCTTGCCA 61.198 55.000 0.00 0.00 44.10 4.92
210 211 0.035439 TTGAGGACGATTCCCTTGCC 60.035 55.000 0.00 0.00 44.10 4.52
211 212 2.044123 ATTGAGGACGATTCCCTTGC 57.956 50.000 0.00 0.00 44.10 4.01
212 213 4.122776 CACTATTGAGGACGATTCCCTTG 58.877 47.826 0.00 0.00 44.10 3.61
213 214 3.134804 CCACTATTGAGGACGATTCCCTT 59.865 47.826 0.00 0.00 44.10 3.95
214 215 2.700897 CCACTATTGAGGACGATTCCCT 59.299 50.000 0.00 0.00 44.10 4.20
215 216 2.698797 TCCACTATTGAGGACGATTCCC 59.301 50.000 0.00 0.00 44.10 3.97
216 217 3.718815 GTCCACTATTGAGGACGATTCC 58.281 50.000 7.88 0.00 42.37 3.01
222 223 4.592485 ATCATCGTCCACTATTGAGGAC 57.408 45.455 12.48 12.48 46.15 3.85
223 224 4.202253 CCAATCATCGTCCACTATTGAGGA 60.202 45.833 0.00 0.00 30.77 3.71
224 225 4.060900 CCAATCATCGTCCACTATTGAGG 58.939 47.826 0.00 0.00 30.77 3.86
225 226 4.060900 CCCAATCATCGTCCACTATTGAG 58.939 47.826 0.00 0.00 30.77 3.02
226 227 3.709141 TCCCAATCATCGTCCACTATTGA 59.291 43.478 0.00 0.00 30.77 2.57
227 228 4.060900 CTCCCAATCATCGTCCACTATTG 58.939 47.826 0.00 0.00 0.00 1.90
228 229 3.967326 TCTCCCAATCATCGTCCACTATT 59.033 43.478 0.00 0.00 0.00 1.73
229 230 3.576118 CTCTCCCAATCATCGTCCACTAT 59.424 47.826 0.00 0.00 0.00 2.12
230 231 2.959030 CTCTCCCAATCATCGTCCACTA 59.041 50.000 0.00 0.00 0.00 2.74
231 232 1.759445 CTCTCCCAATCATCGTCCACT 59.241 52.381 0.00 0.00 0.00 4.00
232 233 1.202580 CCTCTCCCAATCATCGTCCAC 60.203 57.143 0.00 0.00 0.00 4.02
233 234 1.123077 CCTCTCCCAATCATCGTCCA 58.877 55.000 0.00 0.00 0.00 4.02
234 235 1.069358 GTCCTCTCCCAATCATCGTCC 59.931 57.143 0.00 0.00 0.00 4.79
235 236 1.069358 GGTCCTCTCCCAATCATCGTC 59.931 57.143 0.00 0.00 0.00 4.20
236 237 1.123928 GGTCCTCTCCCAATCATCGT 58.876 55.000 0.00 0.00 0.00 3.73
237 238 1.123077 TGGTCCTCTCCCAATCATCG 58.877 55.000 0.00 0.00 0.00 3.84
260 261 0.179111 TTATGCTGTCTTCGCCGGAG 60.179 55.000 5.05 0.00 0.00 4.63
261 262 0.179111 CTTATGCTGTCTTCGCCGGA 60.179 55.000 5.05 0.00 0.00 5.14
262 263 1.766143 GCTTATGCTGTCTTCGCCGG 61.766 60.000 0.00 0.00 36.03 6.13
263 264 1.638467 GCTTATGCTGTCTTCGCCG 59.362 57.895 0.00 0.00 36.03 6.46
264 265 1.638467 CGCTTATGCTGTCTTCGCC 59.362 57.895 0.00 0.00 36.97 5.54
265 266 1.011794 GCGCTTATGCTGTCTTCGC 60.012 57.895 0.00 0.00 36.97 4.70
266 267 0.721154 TTGCGCTTATGCTGTCTTCG 59.279 50.000 9.73 0.00 36.97 3.79
267 268 1.527793 CGTTGCGCTTATGCTGTCTTC 60.528 52.381 9.73 0.00 36.97 2.87
268 269 0.443869 CGTTGCGCTTATGCTGTCTT 59.556 50.000 9.73 0.00 36.97 3.01
269 270 0.389817 TCGTTGCGCTTATGCTGTCT 60.390 50.000 9.73 0.00 36.97 3.41
270 271 0.025513 CTCGTTGCGCTTATGCTGTC 59.974 55.000 9.73 0.00 36.97 3.51
271 272 1.361668 CCTCGTTGCGCTTATGCTGT 61.362 55.000 9.73 0.00 36.97 4.40
272 273 1.083806 TCCTCGTTGCGCTTATGCTG 61.084 55.000 9.73 0.00 36.97 4.41
273 274 0.391130 TTCCTCGTTGCGCTTATGCT 60.391 50.000 9.73 0.00 36.97 3.79
274 275 0.446222 TTTCCTCGTTGCGCTTATGC 59.554 50.000 9.73 0.00 0.00 3.14
275 276 1.062587 CCTTTCCTCGTTGCGCTTATG 59.937 52.381 9.73 2.12 0.00 1.90
276 277 1.066430 TCCTTTCCTCGTTGCGCTTAT 60.066 47.619 9.73 0.00 0.00 1.73
277 278 0.319083 TCCTTTCCTCGTTGCGCTTA 59.681 50.000 9.73 0.00 0.00 3.09
278 279 0.951040 CTCCTTTCCTCGTTGCGCTT 60.951 55.000 9.73 0.00 0.00 4.68
279 280 1.374758 CTCCTTTCCTCGTTGCGCT 60.375 57.895 9.73 0.00 0.00 5.92
280 281 1.374252 TCTCCTTTCCTCGTTGCGC 60.374 57.895 0.00 0.00 0.00 6.09
281 282 0.319555 TGTCTCCTTTCCTCGTTGCG 60.320 55.000 0.00 0.00 0.00 4.85
282 283 1.000955 TCTGTCTCCTTTCCTCGTTGC 59.999 52.381 0.00 0.00 0.00 4.17
283 284 3.321497 CTTCTGTCTCCTTTCCTCGTTG 58.679 50.000 0.00 0.00 0.00 4.10
284 285 2.289133 GCTTCTGTCTCCTTTCCTCGTT 60.289 50.000 0.00 0.00 0.00 3.85
285 286 1.273886 GCTTCTGTCTCCTTTCCTCGT 59.726 52.381 0.00 0.00 0.00 4.18
286 287 1.404851 GGCTTCTGTCTCCTTTCCTCG 60.405 57.143 0.00 0.00 0.00 4.63
287 288 1.404851 CGGCTTCTGTCTCCTTTCCTC 60.405 57.143 0.00 0.00 0.00 3.71
288 289 0.610687 CGGCTTCTGTCTCCTTTCCT 59.389 55.000 0.00 0.00 0.00 3.36
289 290 0.608640 TCGGCTTCTGTCTCCTTTCC 59.391 55.000 0.00 0.00 0.00 3.13
290 291 2.457366 TTCGGCTTCTGTCTCCTTTC 57.543 50.000 0.00 0.00 0.00 2.62
291 292 2.495084 GTTTCGGCTTCTGTCTCCTTT 58.505 47.619 0.00 0.00 0.00 3.11
292 293 1.605712 CGTTTCGGCTTCTGTCTCCTT 60.606 52.381 0.00 0.00 0.00 3.36
293 294 0.038159 CGTTTCGGCTTCTGTCTCCT 60.038 55.000 0.00 0.00 0.00 3.69
294 295 1.014564 CCGTTTCGGCTTCTGTCTCC 61.015 60.000 0.00 0.00 41.17 3.71
295 296 2.446341 CCGTTTCGGCTTCTGTCTC 58.554 57.895 0.00 0.00 41.17 3.36
296 297 4.675404 CCGTTTCGGCTTCTGTCT 57.325 55.556 0.00 0.00 41.17 3.41
306 307 3.041940 AGCAAGCGGACCGTTTCG 61.042 61.111 13.54 10.20 0.00 3.46
307 308 1.959226 TCAGCAAGCGGACCGTTTC 60.959 57.895 13.54 8.63 0.00 2.78
308 309 2.110213 TCAGCAAGCGGACCGTTT 59.890 55.556 16.73 13.60 0.00 3.60
309 310 2.665185 GTCAGCAAGCGGACCGTT 60.665 61.111 16.73 6.58 35.61 4.44
311 312 4.717629 TCGTCAGCAAGCGGACCG 62.718 66.667 17.37 10.29 37.76 4.79
312 313 2.811317 CTCGTCAGCAAGCGGACC 60.811 66.667 17.37 3.09 37.76 4.46
313 314 3.482783 GCTCGTCAGCAAGCGGAC 61.483 66.667 14.07 14.07 46.06 4.79
326 327 4.771356 TTCTTCGGCGTCGGCTCG 62.771 66.667 17.35 2.13 39.81 5.03
327 328 2.881352 CTTCTTCGGCGTCGGCTC 60.881 66.667 17.35 0.00 39.81 4.70
330 331 4.735132 TGGCTTCTTCGGCGTCGG 62.735 66.667 10.62 0.00 36.95 4.79
331 332 2.736995 TTGGCTTCTTCGGCGTCG 60.737 61.111 1.15 1.15 37.82 5.12
332 333 1.668151 AGTTGGCTTCTTCGGCGTC 60.668 57.895 6.85 0.00 0.00 5.19
333 334 1.961277 CAGTTGGCTTCTTCGGCGT 60.961 57.895 6.85 0.00 0.00 5.68
334 335 1.901650 GACAGTTGGCTTCTTCGGCG 61.902 60.000 0.00 0.00 0.00 6.46
335 336 0.884704 TGACAGTTGGCTTCTTCGGC 60.885 55.000 0.00 0.00 0.00 5.54
336 337 0.868406 GTGACAGTTGGCTTCTTCGG 59.132 55.000 0.00 0.00 0.00 4.30
337 338 0.868406 GGTGACAGTTGGCTTCTTCG 59.132 55.000 0.00 0.00 0.00 3.79
338 339 0.868406 CGGTGACAGTTGGCTTCTTC 59.132 55.000 0.00 0.00 0.00 2.87
339 340 1.166531 GCGGTGACAGTTGGCTTCTT 61.167 55.000 0.00 0.00 0.00 2.52
340 341 1.598130 GCGGTGACAGTTGGCTTCT 60.598 57.895 0.00 0.00 0.00 2.85
341 342 1.444119 TTGCGGTGACAGTTGGCTTC 61.444 55.000 0.00 0.00 0.00 3.86
342 343 1.034838 TTTGCGGTGACAGTTGGCTT 61.035 50.000 0.00 0.00 0.00 4.35
343 344 1.453015 TTTGCGGTGACAGTTGGCT 60.453 52.632 0.00 0.00 0.00 4.75
344 345 1.299089 GTTTGCGGTGACAGTTGGC 60.299 57.895 0.00 0.00 0.00 4.52
345 346 1.010125 CGTTTGCGGTGACAGTTGG 60.010 57.895 0.00 0.00 0.00 3.77
346 347 4.588084 CGTTTGCGGTGACAGTTG 57.412 55.556 0.00 0.00 0.00 3.16
356 357 1.064946 TTTGGCAGTTCCGTTTGCG 59.935 52.632 0.00 0.00 41.17 4.85
357 358 0.102300 AGTTTGGCAGTTCCGTTTGC 59.898 50.000 0.00 0.00 39.56 3.68
358 359 2.287368 GGTAGTTTGGCAGTTCCGTTTG 60.287 50.000 0.00 0.00 37.80 2.93
359 360 1.951602 GGTAGTTTGGCAGTTCCGTTT 59.048 47.619 0.00 0.00 37.80 3.60
360 361 1.134037 TGGTAGTTTGGCAGTTCCGTT 60.134 47.619 0.00 0.00 37.80 4.44
361 362 0.470766 TGGTAGTTTGGCAGTTCCGT 59.529 50.000 0.00 0.00 37.80 4.69
362 363 1.468520 CATGGTAGTTTGGCAGTTCCG 59.531 52.381 0.00 0.00 37.80 4.30
363 364 2.514803 ACATGGTAGTTTGGCAGTTCC 58.485 47.619 0.00 0.00 0.00 3.62
364 365 3.127030 GCTACATGGTAGTTTGGCAGTTC 59.873 47.826 0.00 0.00 0.00 3.01
365 366 3.081804 GCTACATGGTAGTTTGGCAGTT 58.918 45.455 0.00 0.00 0.00 3.16
366 367 2.711542 GCTACATGGTAGTTTGGCAGT 58.288 47.619 0.00 0.00 0.00 4.40
367 368 1.665679 CGCTACATGGTAGTTTGGCAG 59.334 52.381 0.00 0.00 0.00 4.85
368 369 1.677518 CCGCTACATGGTAGTTTGGCA 60.678 52.381 0.00 0.00 0.00 4.92
369 370 1.014352 CCGCTACATGGTAGTTTGGC 58.986 55.000 0.00 0.00 0.00 4.52
370 371 1.014352 GCCGCTACATGGTAGTTTGG 58.986 55.000 0.00 6.29 0.00 3.28
371 372 0.650512 CGCCGCTACATGGTAGTTTG 59.349 55.000 0.00 0.00 0.00 2.93
372 373 1.087771 GCGCCGCTACATGGTAGTTT 61.088 55.000 0.00 0.00 0.00 2.66
373 374 1.520787 GCGCCGCTACATGGTAGTT 60.521 57.895 0.00 0.00 0.00 2.24
374 375 2.106332 GCGCCGCTACATGGTAGT 59.894 61.111 0.00 0.00 0.00 2.73
375 376 3.030308 CGCGCCGCTACATGGTAG 61.030 66.667 7.78 0.00 0.00 3.18
376 377 3.359515 AACGCGCCGCTACATGGTA 62.360 57.895 5.73 0.00 0.00 3.25
377 378 4.752879 AACGCGCCGCTACATGGT 62.753 61.111 5.73 0.00 0.00 3.55
378 379 4.222589 CAACGCGCCGCTACATGG 62.223 66.667 5.73 0.00 0.00 3.66
379 380 2.077801 CTACAACGCGCCGCTACATG 62.078 60.000 5.73 3.08 0.00 3.21
380 381 1.876714 CTACAACGCGCCGCTACAT 60.877 57.895 5.73 0.00 0.00 2.29
381 382 2.505337 CTACAACGCGCCGCTACA 60.505 61.111 5.73 0.00 0.00 2.74
382 383 3.252484 CCTACAACGCGCCGCTAC 61.252 66.667 5.73 0.00 0.00 3.58
383 384 2.877360 CTTCCTACAACGCGCCGCTA 62.877 60.000 5.73 0.00 0.00 4.26
384 385 4.367023 TTCCTACAACGCGCCGCT 62.367 61.111 5.73 0.00 0.00 5.52
385 386 3.849953 CTTCCTACAACGCGCCGC 61.850 66.667 5.73 0.00 0.00 6.53
386 387 3.186047 CCTTCCTACAACGCGCCG 61.186 66.667 5.73 0.00 0.00 6.46
387 388 3.497031 GCCTTCCTACAACGCGCC 61.497 66.667 5.73 0.00 0.00 6.53
388 389 3.497031 GGCCTTCCTACAACGCGC 61.497 66.667 5.73 0.00 0.00 6.86
389 390 2.047655 TGGCCTTCCTACAACGCG 60.048 61.111 3.53 3.53 0.00 6.01
390 391 2.038837 GGTGGCCTTCCTACAACGC 61.039 63.158 3.32 0.00 0.00 4.84
391 392 0.953960 GTGGTGGCCTTCCTACAACG 60.954 60.000 16.22 0.00 0.00 4.10
392 393 0.109723 TGTGGTGGCCTTCCTACAAC 59.890 55.000 16.22 5.12 0.00 3.32
393 394 0.109723 GTGTGGTGGCCTTCCTACAA 59.890 55.000 16.22 0.00 0.00 2.41
394 395 1.057275 TGTGTGGTGGCCTTCCTACA 61.057 55.000 16.22 16.53 0.00 2.74
395 396 0.605589 GTGTGTGGTGGCCTTCCTAC 60.606 60.000 16.22 14.75 0.00 3.18
396 397 0.766674 AGTGTGTGGTGGCCTTCCTA 60.767 55.000 16.22 5.42 0.00 2.94
397 398 2.078665 AGTGTGTGGTGGCCTTCCT 61.079 57.895 16.22 0.00 0.00 3.36
398 399 1.898574 CAGTGTGTGGTGGCCTTCC 60.899 63.158 3.32 7.51 0.00 3.46
399 400 1.898574 CCAGTGTGTGGTGGCCTTC 60.899 63.158 3.32 0.00 42.17 3.46
400 401 2.195683 CCAGTGTGTGGTGGCCTT 59.804 61.111 3.32 0.00 42.17 4.35
408 409 0.469917 AAGGTGAGGTCCAGTGTGTG 59.530 55.000 0.00 0.00 0.00 3.82
409 410 0.469917 CAAGGTGAGGTCCAGTGTGT 59.530 55.000 0.00 0.00 0.00 3.72
410 411 0.886490 GCAAGGTGAGGTCCAGTGTG 60.886 60.000 0.00 0.00 0.00 3.82
411 412 1.451936 GCAAGGTGAGGTCCAGTGT 59.548 57.895 0.00 0.00 0.00 3.55
412 413 1.302832 GGCAAGGTGAGGTCCAGTG 60.303 63.158 0.00 0.00 0.00 3.66
413 414 1.136329 ATGGCAAGGTGAGGTCCAGT 61.136 55.000 0.00 0.00 0.00 4.00
414 415 0.393537 GATGGCAAGGTGAGGTCCAG 60.394 60.000 0.00 0.00 0.00 3.86
415 416 1.685224 GATGGCAAGGTGAGGTCCA 59.315 57.895 0.00 0.00 0.00 4.02
416 417 1.077429 GGATGGCAAGGTGAGGTCC 60.077 63.158 0.00 0.00 0.00 4.46
417 418 1.450312 CGGATGGCAAGGTGAGGTC 60.450 63.158 0.00 0.00 0.00 3.85
418 419 2.671070 CGGATGGCAAGGTGAGGT 59.329 61.111 0.00 0.00 0.00 3.85
419 420 2.825836 GCGGATGGCAAGGTGAGG 60.826 66.667 0.00 0.00 42.87 3.86
420 421 2.825836 GGCGGATGGCAAGGTGAG 60.826 66.667 0.00 0.00 46.16 3.51
421 422 4.424711 GGGCGGATGGCAAGGTGA 62.425 66.667 0.00 0.00 46.16 4.02
434 435 4.077184 TGCTCTAACCGTGGGGCG 62.077 66.667 0.00 0.00 40.95 6.13
435 436 2.125106 CTGCTCTAACCGTGGGGC 60.125 66.667 0.00 0.00 36.48 5.80
436 437 2.125106 GCTGCTCTAACCGTGGGG 60.125 66.667 0.00 0.00 40.11 4.96
437 438 1.003839 TTGCTGCTCTAACCGTGGG 60.004 57.895 0.00 0.00 0.00 4.61
438 439 1.298859 GGTTGCTGCTCTAACCGTGG 61.299 60.000 0.00 0.00 37.23 4.94
439 440 2.162716 GGTTGCTGCTCTAACCGTG 58.837 57.895 0.00 0.00 37.23 4.94
440 441 4.695560 GGTTGCTGCTCTAACCGT 57.304 55.556 0.00 0.00 37.23 4.83
442 443 1.912371 GCGTGGTTGCTGCTCTAACC 61.912 60.000 12.11 12.11 45.15 2.85
443 444 1.497722 GCGTGGTTGCTGCTCTAAC 59.502 57.895 0.00 0.00 0.00 2.34
444 445 1.671054 GGCGTGGTTGCTGCTCTAA 60.671 57.895 0.00 0.00 34.52 2.10
445 446 2.047274 GGCGTGGTTGCTGCTCTA 60.047 61.111 0.00 0.00 34.52 2.43
446 447 3.772853 TTGGCGTGGTTGCTGCTCT 62.773 57.895 0.00 0.00 34.52 4.09
447 448 3.259425 CTTGGCGTGGTTGCTGCTC 62.259 63.158 0.00 0.00 34.52 4.26
448 449 3.289834 CTTGGCGTGGTTGCTGCT 61.290 61.111 0.00 0.00 34.52 4.24
450 451 3.289834 AGCTTGGCGTGGTTGCTG 61.290 61.111 0.00 0.00 32.32 4.41
451 452 3.289834 CAGCTTGGCGTGGTTGCT 61.290 61.111 0.00 0.00 34.52 3.91
452 453 3.137637 AACAGCTTGGCGTGGTTGC 62.138 57.895 0.00 0.00 0.00 4.17
453 454 1.299316 CAACAGCTTGGCGTGGTTG 60.299 57.895 9.06 9.06 35.28 3.77
454 455 3.119193 CAACAGCTTGGCGTGGTT 58.881 55.556 0.00 0.00 0.00 3.67
455 456 3.595758 GCAACAGCTTGGCGTGGT 61.596 61.111 0.00 0.00 0.00 4.16
456 457 4.347453 GGCAACAGCTTGGCGTGG 62.347 66.667 0.00 0.00 42.55 4.94
461 462 2.736531 GTTGGGGCAACAGCTTGG 59.263 61.111 0.00 0.00 43.09 3.61
462 463 2.736531 GGTTGGGGCAACAGCTTG 59.263 61.111 0.00 0.00 45.11 4.01
463 464 2.524148 GGGTTGGGGCAACAGCTT 60.524 61.111 0.00 0.00 45.11 3.74
464 465 4.974721 CGGGTTGGGGCAACAGCT 62.975 66.667 0.00 0.00 45.11 4.24
486 487 4.514585 TTGTTGTGGCCGGCAGGT 62.515 61.111 30.85 0.00 40.50 4.00
487 488 3.977244 GTTGTTGTGGCCGGCAGG 61.977 66.667 30.85 0.00 41.62 4.85
488 489 2.780094 TTGTTGTTGTGGCCGGCAG 61.780 57.895 30.85 0.00 0.00 4.85
489 490 2.755876 TTGTTGTTGTGGCCGGCA 60.756 55.556 30.85 12.04 0.00 5.69
490 491 2.279186 GTTGTTGTTGTGGCCGGC 60.279 61.111 21.18 21.18 0.00 6.13
491 492 1.065600 CTGTTGTTGTTGTGGCCGG 59.934 57.895 0.00 0.00 0.00 6.13
492 493 1.065600 CCTGTTGTTGTTGTGGCCG 59.934 57.895 0.00 0.00 0.00 6.13
493 494 1.040339 TCCCTGTTGTTGTTGTGGCC 61.040 55.000 0.00 0.00 0.00 5.36
494 495 0.102300 GTCCCTGTTGTTGTTGTGGC 59.898 55.000 0.00 0.00 0.00 5.01
495 496 1.676006 GAGTCCCTGTTGTTGTTGTGG 59.324 52.381 0.00 0.00 0.00 4.17
496 497 1.676006 GGAGTCCCTGTTGTTGTTGTG 59.324 52.381 0.00 0.00 0.00 3.33
497 498 1.409661 GGGAGTCCCTGTTGTTGTTGT 60.410 52.381 22.04 0.00 41.34 3.32
498 499 1.318576 GGGAGTCCCTGTTGTTGTTG 58.681 55.000 22.04 0.00 41.34 3.33
499 500 0.923358 TGGGAGTCCCTGTTGTTGTT 59.077 50.000 28.73 0.00 45.70 2.83
500 501 0.474184 CTGGGAGTCCCTGTTGTTGT 59.526 55.000 28.73 0.00 45.70 3.32
501 502 0.764890 TCTGGGAGTCCCTGTTGTTG 59.235 55.000 28.73 10.05 45.70 3.33
502 503 1.630878 GATCTGGGAGTCCCTGTTGTT 59.369 52.381 28.73 14.30 45.70 2.83
503 504 1.280457 GATCTGGGAGTCCCTGTTGT 58.720 55.000 28.73 17.45 45.70 3.32
504 505 0.543749 GGATCTGGGAGTCCCTGTTG 59.456 60.000 28.73 15.60 45.70 3.33
505 506 0.978146 CGGATCTGGGAGTCCCTGTT 60.978 60.000 28.73 22.15 45.70 3.16
506 507 1.381872 CGGATCTGGGAGTCCCTGT 60.382 63.158 28.73 17.70 45.70 4.00
507 508 2.801631 GCGGATCTGGGAGTCCCTG 61.802 68.421 28.73 27.06 45.70 4.45
508 509 2.444895 GCGGATCTGGGAGTCCCT 60.445 66.667 28.73 9.17 45.70 4.20
509 510 3.551407 GGCGGATCTGGGAGTCCC 61.551 72.222 22.54 22.54 45.71 4.46
510 511 2.764128 TGGCGGATCTGGGAGTCC 60.764 66.667 0.00 0.00 0.00 3.85
511 512 2.818132 CTGGCGGATCTGGGAGTC 59.182 66.667 3.14 0.00 0.00 3.36
512 513 3.474570 GCTGGCGGATCTGGGAGT 61.475 66.667 3.14 0.00 0.00 3.85
513 514 3.457625 CTGCTGGCGGATCTGGGAG 62.458 68.421 3.14 0.00 0.00 4.30
514 515 3.473647 CTGCTGGCGGATCTGGGA 61.474 66.667 3.14 0.00 0.00 4.37
516 517 4.478371 TGCTGCTGGCGGATCTGG 62.478 66.667 3.14 0.00 45.43 3.86
517 518 3.200593 GTGCTGCTGGCGGATCTG 61.201 66.667 5.51 0.00 45.43 2.90
518 519 4.827087 CGTGCTGCTGGCGGATCT 62.827 66.667 5.51 0.00 45.43 2.75
545 546 4.506255 GTTCATGGGGCTCCGGGG 62.506 72.222 0.00 0.00 35.24 5.73
546 547 3.704231 CTGTTCATGGGGCTCCGGG 62.704 68.421 0.00 0.00 35.24 5.73
547 548 2.124570 CTGTTCATGGGGCTCCGG 60.125 66.667 0.00 0.00 35.24 5.14
548 549 2.124570 CCTGTTCATGGGGCTCCG 60.125 66.667 0.00 0.00 35.24 4.63
549 550 2.440980 GCCTGTTCATGGGGCTCC 60.441 66.667 0.00 0.00 42.31 4.70
550 551 2.440980 GGCCTGTTCATGGGGCTC 60.441 66.667 15.43 6.38 44.70 4.70
551 552 4.066139 GGGCCTGTTCATGGGGCT 62.066 66.667 0.84 0.00 45.80 5.19
553 554 3.704231 CTCGGGCCTGTTCATGGGG 62.704 68.421 12.43 0.00 0.00 4.96
554 555 2.124570 CTCGGGCCTGTTCATGGG 60.125 66.667 12.43 0.00 0.00 4.00
555 556 1.746615 CACTCGGGCCTGTTCATGG 60.747 63.158 12.43 0.00 0.00 3.66
556 557 2.401766 GCACTCGGGCCTGTTCATG 61.402 63.158 12.43 7.08 0.00 3.07
557 558 2.045926 GCACTCGGGCCTGTTCAT 60.046 61.111 12.43 0.00 0.00 2.57
575 576 4.717629 TCTGTTCGGCGGCGTCAG 62.718 66.667 33.28 33.28 0.00 3.51
576 577 4.287781 TTCTGTTCGGCGGCGTCA 62.288 61.111 31.06 26.38 0.00 4.35
577 578 3.479269 CTTCTGTTCGGCGGCGTC 61.479 66.667 31.06 23.52 0.00 5.19
599 600 0.645355 CGACACGATGACCCATTTCG 59.355 55.000 0.00 0.00 38.76 3.46
614 615 0.606604 GACTAAGGCCAACTCCGACA 59.393 55.000 5.01 0.00 0.00 4.35
616 617 0.543410 TGGACTAAGGCCAACTCCGA 60.543 55.000 5.01 0.00 31.13 4.55
719 721 1.824230 TGTTGGGCATTTATCACCAGC 59.176 47.619 0.00 0.00 33.96 4.85
847 849 2.118313 TGAGCTGTGATTGGTGGATG 57.882 50.000 0.00 0.00 0.00 3.51
866 868 1.367848 AGGTGGAAGGAGGAAGGAGAT 59.632 52.381 0.00 0.00 0.00 2.75
867 869 0.793617 AGGTGGAAGGAGGAAGGAGA 59.206 55.000 0.00 0.00 0.00 3.71
920 932 1.375140 CGGAGTGTGCAGATGCTGT 60.375 57.895 6.35 0.00 42.66 4.40
947 959 0.678048 GTGGGGTTAGGCTGCAAGAG 60.678 60.000 0.50 0.00 34.07 2.85
954 966 1.686110 CGAGAGGTGGGGTTAGGCT 60.686 63.158 0.00 0.00 0.00 4.58
958 970 0.702902 AGACTCGAGAGGTGGGGTTA 59.297 55.000 21.68 0.00 0.00 2.85
979 991 0.802607 GACGCTGATTCGAGGGTGTC 60.803 60.000 9.41 2.73 39.11 3.67
1044 1082 3.717294 GGCTTCTTCCCCGCTGGA 61.717 66.667 0.00 0.00 43.18 3.86
1047 1085 3.256960 TTGGGCTTCTTCCCCGCT 61.257 61.111 0.00 0.00 45.95 5.52
1113 1151 3.431572 CGCTCTTCTTGGACTTCTTCTTG 59.568 47.826 0.00 0.00 0.00 3.02
1123 1161 0.603569 GTCTCCACGCTCTTCTTGGA 59.396 55.000 0.00 0.00 40.40 3.53
1450 2203 2.225019 CAGAACACAAACTGGCAGCTAG 59.775 50.000 15.89 3.79 0.00 3.42
1484 2237 4.271049 AGGCGATACAATTTGATTCTCACG 59.729 41.667 2.79 0.00 0.00 4.35
1495 2248 1.480954 AGACCGACAGGCGATACAATT 59.519 47.619 0.00 0.00 44.57 2.32
1534 2418 5.559035 CGAAGGCAGAAAGTTACACTGAAAG 60.559 44.000 0.00 0.00 42.29 2.62
1644 2599 1.315981 TGCCTGGAACGCAACACAAA 61.316 50.000 0.00 0.00 32.05 2.83
1655 2612 0.322816 CAAAGCCTAGCTGCCTGGAA 60.323 55.000 11.91 0.00 39.62 3.53
1656 2613 1.200760 TCAAAGCCTAGCTGCCTGGA 61.201 55.000 11.91 0.00 39.62 3.86
1657 2614 0.322816 TTCAAAGCCTAGCTGCCTGG 60.323 55.000 0.00 0.00 39.62 4.45
1658 2615 1.674962 GATTCAAAGCCTAGCTGCCTG 59.325 52.381 0.00 0.00 39.62 4.85
1795 2799 0.525668 CTTCTACAGGTGCCTACGCG 60.526 60.000 3.53 3.53 38.08 6.01
1806 2810 7.361542 CCCATCTTGACACAATTTCTTCTACAG 60.362 40.741 0.00 0.00 0.00 2.74
1817 2822 7.722949 AAATTATCACCCATCTTGACACAAT 57.277 32.000 0.00 0.00 0.00 2.71
1832 2837 8.700722 TGCATAAACATCACCAAAATTATCAC 57.299 30.769 0.00 0.00 0.00 3.06
1877 2882 3.512724 CCAAAACTCCCTTTGCATCAGAT 59.487 43.478 0.00 0.00 35.38 2.90
1889 2894 0.954452 CTGCACTCACCAAAACTCCC 59.046 55.000 0.00 0.00 0.00 4.30
1908 2913 2.222027 GACCCGGGATGATTCATCAAC 58.778 52.381 32.02 16.40 42.13 3.18
1921 2926 3.470888 ATTCTCGCCTGACCCGGG 61.471 66.667 22.25 22.25 0.00 5.73
1933 2938 7.201565 GGAGTAGCATTTACAGTGTTCATTCTC 60.202 40.741 0.00 0.64 0.00 2.87
1949 2954 8.492415 TGATGGTAAGTAATAGGAGTAGCATT 57.508 34.615 0.00 0.00 34.10 3.56
2013 3052 2.080693 ACGGCATTGCTGATCGTTTTA 58.919 42.857 23.91 0.00 38.46 1.52
2016 3055 1.396996 GTAACGGCATTGCTGATCGTT 59.603 47.619 23.91 22.29 42.28 3.85
2017 3056 1.006832 GTAACGGCATTGCTGATCGT 58.993 50.000 23.91 13.99 38.46 3.73
2018 3057 1.258982 GAGTAACGGCATTGCTGATCG 59.741 52.381 23.91 13.34 38.46 3.69
2019 3058 2.555199 AGAGTAACGGCATTGCTGATC 58.445 47.619 23.91 14.42 38.46 2.92
2020 3059 2.698855 AGAGTAACGGCATTGCTGAT 57.301 45.000 23.91 14.68 38.46 2.90
2021 3060 2.472695 AAGAGTAACGGCATTGCTGA 57.527 45.000 23.91 0.00 38.46 4.26
2022 3061 4.154195 AGTTTAAGAGTAACGGCATTGCTG 59.846 41.667 15.93 15.93 41.29 4.41
2023 3062 4.324267 AGTTTAAGAGTAACGGCATTGCT 58.676 39.130 8.82 0.00 35.70 3.91
2024 3063 4.680171 AGTTTAAGAGTAACGGCATTGC 57.320 40.909 0.00 0.00 0.00 3.56
2107 3161 4.688511 AGTGTGTACGTTCTCTGATCTC 57.311 45.455 0.00 0.00 0.00 2.75
2199 3253 4.797800 ACTTCTTCTAAACGGGTACTCC 57.202 45.455 0.00 0.00 0.00 3.85
2206 3260 2.882137 TGCCCAAACTTCTTCTAAACGG 59.118 45.455 0.00 0.00 0.00 4.44
2226 3280 5.393962 GGAATCTGTTCGAGACCATTTTTG 58.606 41.667 0.00 0.00 35.10 2.44
2239 3293 5.873179 TTCCATGTTTACGGAATCTGTTC 57.127 39.130 0.00 0.00 36.36 3.18
2247 3301 7.767198 CCTCTAACTTTATTCCATGTTTACGGA 59.233 37.037 0.00 0.00 0.00 4.69
2249 3303 8.712285 TCCTCTAACTTTATTCCATGTTTACG 57.288 34.615 0.00 0.00 0.00 3.18
2280 3334 9.753674 ACTAGAGGGAAATTCATGTCAAATTTA 57.246 29.630 0.00 0.00 36.66 1.40
2305 3359 4.353383 GGATGTAATACTTCCCCTGGAC 57.647 50.000 12.78 0.00 36.68 4.02
2324 3378 3.970842 AGTTGGCCAAAATATTACGGGA 58.029 40.909 22.47 0.00 0.00 5.14
2346 3400 1.172812 GCGAGGTGGCCTGAAGTTTT 61.173 55.000 3.32 0.00 31.76 2.43
2369 3423 3.594775 CAACTGCCCAGCGTTGCA 61.595 61.111 9.92 0.00 36.75 4.08
2371 3425 4.688419 CGCAACTGCCCAGCGTTG 62.688 66.667 15.18 15.18 45.82 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.