Multiple sequence alignment - TraesCS6B01G455500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G455500 chr6B 100.000 2237 0 0 1 2237 712269884 712267648 0.000000e+00 4132
1 TraesCS6B01G455500 chr6A 86.250 960 50 30 800 1715 613356538 613355617 0.000000e+00 966
2 TraesCS6B01G455500 chr6A 80.556 396 59 14 23 413 613357139 613356757 2.810000e-74 289
3 TraesCS6B01G455500 chr6A 82.906 234 23 7 2020 2237 613355558 613355326 6.300000e-46 195
4 TraesCS6B01G455500 chr6D 88.828 367 11 11 820 1180 467092364 467092022 7.390000e-115 424
5 TraesCS6B01G455500 chr6D 83.745 486 32 21 1256 1715 467091683 467091219 1.240000e-112 416
6 TraesCS6B01G455500 chr6D 82.353 425 49 14 1 413 467093008 467092598 1.640000e-91 346
7 TraesCS6B01G455500 chr5D 77.922 693 85 40 1014 1682 398001054 398001702 9.760000e-99 370
8 TraesCS6B01G455500 chr3B 83.942 274 18 11 1410 1682 754276940 754277188 2.870000e-59 239
9 TraesCS6B01G455500 chr3B 83.456 272 19 11 1410 1680 452536442 452536688 1.730000e-56 230
10 TraesCS6B01G455500 chr7B 83.883 273 18 12 1410 1681 640061295 640061542 1.030000e-58 237
11 TraesCS6B01G455500 chr4A 83.577 274 19 11 1410 1682 683941297 683941545 1.340000e-57 233
12 TraesCS6B01G455500 chr2A 83.453 278 18 12 1410 1685 546306994 546306743 1.340000e-57 233
13 TraesCS6B01G455500 chr1A 83.212 274 20 11 1410 1682 504761047 504761295 6.210000e-56 228
14 TraesCS6B01G455500 chr1B 76.062 259 37 22 1138 1380 335425380 335425629 6.530000e-21 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G455500 chr6B 712267648 712269884 2236 True 4132.000000 4132 100.000000 1 2237 1 chr6B.!!$R1 2236
1 TraesCS6B01G455500 chr6A 613355326 613357139 1813 True 483.333333 966 83.237333 23 2237 3 chr6A.!!$R1 2214
2 TraesCS6B01G455500 chr6D 467091219 467093008 1789 True 395.333333 424 84.975333 1 1715 3 chr6D.!!$R1 1714
3 TraesCS6B01G455500 chr5D 398001054 398001702 648 False 370.000000 370 77.922000 1014 1682 1 chr5D.!!$F1 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
915 939 0.108898 CCTCTCCTTGCAGTGAGTCG 60.109 60.0 12.61 6.91 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1878 2250 0.108992 TGAACCGTCCGATGCAGTAC 60.109 55.0 0.0 0.0 0.0 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 6.068670 ACCAGCTTAACTTATGGAGTGTTTT 58.931 36.000 0.00 0.00 39.00 2.43
45 46 7.084486 CCAGCTTAACTTATGGAGTGTTTTTC 58.916 38.462 0.00 0.00 39.00 2.29
46 47 7.255451 CCAGCTTAACTTATGGAGTGTTTTTCA 60.255 37.037 0.00 0.00 39.00 2.69
134 139 0.473755 TAGACATTCCCATGCGCCAT 59.526 50.000 4.18 0.00 33.05 4.40
148 157 1.024271 CGCCATACATTTGGACCCAG 58.976 55.000 0.00 0.00 39.25 4.45
151 160 2.026641 CCATACATTTGGACCCAGCTG 58.973 52.381 6.78 6.78 39.25 4.24
163 172 3.890527 CCAGCTGGGAAGCTATTGT 57.109 52.632 26.14 0.00 44.30 2.71
165 174 3.281727 CCAGCTGGGAAGCTATTGTAA 57.718 47.619 26.14 0.00 44.30 2.41
166 175 2.945668 CCAGCTGGGAAGCTATTGTAAC 59.054 50.000 26.14 0.00 44.30 2.50
167 176 3.370953 CCAGCTGGGAAGCTATTGTAACT 60.371 47.826 26.14 0.00 44.30 2.24
168 177 4.265073 CAGCTGGGAAGCTATTGTAACTT 58.735 43.478 5.57 0.00 44.30 2.66
169 178 4.333926 CAGCTGGGAAGCTATTGTAACTTC 59.666 45.833 5.57 0.00 44.30 3.01
173 182 6.258947 GCTGGGAAGCTATTGTAACTTCTAAG 59.741 42.308 0.00 0.00 39.77 2.18
176 185 6.037281 GGGAAGCTATTGTAACTTCTAAGTGC 59.963 42.308 0.00 0.00 39.66 4.40
233 248 1.327690 AAGATGGTCTCCGGCGCTTA 61.328 55.000 7.64 0.00 0.00 3.09
234 249 1.591863 GATGGTCTCCGGCGCTTAC 60.592 63.158 7.64 0.00 0.00 2.34
266 281 2.267642 CAAAGACCCGGCGGATCA 59.732 61.111 30.79 0.00 0.00 2.92
270 285 2.798148 AAGACCCGGCGGATCACAAC 62.798 60.000 30.79 9.90 0.00 3.32
294 309 2.325583 ACTTTCTCTTCAACCGTGCA 57.674 45.000 0.00 0.00 0.00 4.57
299 314 2.483876 TCTCTTCAACCGTGCAAAGAG 58.516 47.619 14.71 14.71 0.00 2.85
314 329 1.101049 AAGAGCCACCACCAAACACG 61.101 55.000 0.00 0.00 0.00 4.49
315 330 1.822186 GAGCCACCACCAAACACGT 60.822 57.895 0.00 0.00 0.00 4.49
349 364 3.364441 GCGGGCATGTGCAGTGAA 61.364 61.111 7.36 0.00 44.36 3.18
350 365 2.872557 CGGGCATGTGCAGTGAAG 59.127 61.111 7.36 0.00 44.36 3.02
361 376 2.574450 TGCAGTGAAGCAACAAGATGA 58.426 42.857 0.00 0.00 42.46 2.92
362 377 3.151554 TGCAGTGAAGCAACAAGATGAT 58.848 40.909 0.00 0.00 42.46 2.45
366 381 3.439476 AGTGAAGCAACAAGATGATGAGC 59.561 43.478 0.00 0.00 0.00 4.26
387 402 2.123428 ATGCGGCAAATGGAGGAGC 61.123 57.895 6.82 0.00 0.00 4.70
388 403 3.880846 GCGGCAAATGGAGGAGCG 61.881 66.667 0.00 0.00 0.00 5.03
389 404 2.436646 CGGCAAATGGAGGAGCGT 60.437 61.111 0.00 0.00 0.00 5.07
393 408 2.436646 AAATGGAGGAGCGTGCGG 60.437 61.111 0.00 0.00 0.00 5.69
413 430 2.432628 GGGAGTGACAAGCCGACG 60.433 66.667 0.00 0.00 0.00 5.12
414 431 2.649034 GGAGTGACAAGCCGACGA 59.351 61.111 0.00 0.00 0.00 4.20
415 432 1.444553 GGAGTGACAAGCCGACGAG 60.445 63.158 0.00 0.00 0.00 4.18
416 433 1.444553 GAGTGACAAGCCGACGAGG 60.445 63.158 0.00 0.00 44.97 4.63
417 434 1.863662 GAGTGACAAGCCGACGAGGA 61.864 60.000 0.00 0.00 45.00 3.71
418 435 1.006571 GTGACAAGCCGACGAGGAA 60.007 57.895 0.00 0.00 45.00 3.36
419 436 0.599204 GTGACAAGCCGACGAGGAAA 60.599 55.000 0.00 0.00 45.00 3.13
420 437 0.599204 TGACAAGCCGACGAGGAAAC 60.599 55.000 0.00 0.00 45.00 2.78
429 446 1.226746 GACGAGGAAACACACAAGGG 58.773 55.000 0.00 0.00 0.00 3.95
432 449 0.467290 GAGGAAACACACAAGGGGCA 60.467 55.000 0.00 0.00 0.00 5.36
435 452 1.398692 GAAACACACAAGGGGCAAGA 58.601 50.000 0.00 0.00 0.00 3.02
436 453 1.963515 GAAACACACAAGGGGCAAGAT 59.036 47.619 0.00 0.00 0.00 2.40
437 454 2.086610 AACACACAAGGGGCAAGATT 57.913 45.000 0.00 0.00 0.00 2.40
438 455 2.086610 ACACACAAGGGGCAAGATTT 57.913 45.000 0.00 0.00 0.00 2.17
439 456 2.397597 ACACACAAGGGGCAAGATTTT 58.602 42.857 0.00 0.00 0.00 1.82
440 457 2.771372 ACACACAAGGGGCAAGATTTTT 59.229 40.909 0.00 0.00 0.00 1.94
461 478 0.382515 TTTTTGCGTCGAAAGGGTGG 59.617 50.000 0.00 0.00 0.00 4.61
468 485 2.672996 CGAAAGGGTGGGGCACAG 60.673 66.667 0.00 0.00 35.86 3.66
469 486 2.843545 GAAAGGGTGGGGCACAGA 59.156 61.111 0.00 0.00 35.86 3.41
489 511 2.661537 TCCAACACGCGTGCTCTG 60.662 61.111 37.35 28.90 0.00 3.35
494 516 3.857854 CACGCGTGCTCTGATGCC 61.858 66.667 28.16 0.00 0.00 4.40
499 521 2.202743 GTGCTCTGATGCCGCGTA 60.203 61.111 4.92 0.00 0.00 4.42
501 523 2.202743 GCTCTGATGCCGCGTACA 60.203 61.111 4.92 2.86 0.00 2.90
502 524 1.592669 GCTCTGATGCCGCGTACAT 60.593 57.895 11.21 11.21 0.00 2.29
504 526 1.868109 GCTCTGATGCCGCGTACATAA 60.868 52.381 11.35 4.30 0.00 1.90
522 546 2.770134 AAAAAGCCGTGTGTCGTCA 58.230 47.368 0.00 0.00 37.94 4.35
523 547 0.375803 AAAAAGCCGTGTGTCGTCAC 59.624 50.000 5.81 5.81 44.08 3.67
531 555 3.401095 GTGTCGTCACACCGCAAA 58.599 55.556 7.95 0.00 46.49 3.68
532 556 1.716760 GTGTCGTCACACCGCAAAA 59.283 52.632 7.95 0.00 46.49 2.44
533 557 0.587985 GTGTCGTCACACCGCAAAAC 60.588 55.000 7.95 0.00 46.49 2.43
534 558 1.010462 GTCGTCACACCGCAAAACC 60.010 57.895 0.00 0.00 0.00 3.27
535 559 1.153329 TCGTCACACCGCAAAACCT 60.153 52.632 0.00 0.00 0.00 3.50
536 560 1.155424 TCGTCACACCGCAAAACCTC 61.155 55.000 0.00 0.00 0.00 3.85
537 561 1.157870 CGTCACACCGCAAAACCTCT 61.158 55.000 0.00 0.00 0.00 3.69
538 562 0.586802 GTCACACCGCAAAACCTCTC 59.413 55.000 0.00 0.00 0.00 3.20
539 563 0.534203 TCACACCGCAAAACCTCTCC 60.534 55.000 0.00 0.00 0.00 3.71
540 564 1.597027 ACACCGCAAAACCTCTCCG 60.597 57.895 0.00 0.00 0.00 4.63
541 565 2.668550 ACCGCAAAACCTCTCCGC 60.669 61.111 0.00 0.00 0.00 5.54
542 566 2.668212 CCGCAAAACCTCTCCGCA 60.668 61.111 0.00 0.00 0.00 5.69
543 567 2.040544 CCGCAAAACCTCTCCGCAT 61.041 57.895 0.00 0.00 0.00 4.73
544 568 1.135315 CGCAAAACCTCTCCGCATG 59.865 57.895 0.00 0.00 0.00 4.06
545 569 1.153958 GCAAAACCTCTCCGCATGC 60.154 57.895 7.91 7.91 0.00 4.06
546 570 1.508088 CAAAACCTCTCCGCATGCC 59.492 57.895 13.15 0.00 0.00 4.40
566 590 2.357517 CACGCCACACACCCTCTC 60.358 66.667 0.00 0.00 0.00 3.20
569 593 2.426023 GCCACACACCCTCTCGTT 59.574 61.111 0.00 0.00 0.00 3.85
575 599 1.254026 CACACCCTCTCGTTAGACCA 58.746 55.000 0.00 0.00 0.00 4.02
576 600 1.202582 CACACCCTCTCGTTAGACCAG 59.797 57.143 0.00 0.00 0.00 4.00
577 601 1.203025 ACACCCTCTCGTTAGACCAGT 60.203 52.381 0.00 0.00 0.00 4.00
581 605 2.761208 CCCTCTCGTTAGACCAGTGATT 59.239 50.000 0.00 0.00 0.00 2.57
582 606 3.195825 CCCTCTCGTTAGACCAGTGATTT 59.804 47.826 0.00 0.00 0.00 2.17
583 607 4.322801 CCCTCTCGTTAGACCAGTGATTTT 60.323 45.833 0.00 0.00 0.00 1.82
584 608 5.105473 CCCTCTCGTTAGACCAGTGATTTTA 60.105 44.000 0.00 0.00 0.00 1.52
585 609 6.407074 CCCTCTCGTTAGACCAGTGATTTTAT 60.407 42.308 0.00 0.00 0.00 1.40
586 610 7.042335 CCTCTCGTTAGACCAGTGATTTTATT 58.958 38.462 0.00 0.00 0.00 1.40
587 611 7.549488 CCTCTCGTTAGACCAGTGATTTTATTT 59.451 37.037 0.00 0.00 0.00 1.40
588 612 8.842358 TCTCGTTAGACCAGTGATTTTATTTT 57.158 30.769 0.00 0.00 0.00 1.82
589 613 8.932791 TCTCGTTAGACCAGTGATTTTATTTTC 58.067 33.333 0.00 0.00 0.00 2.29
590 614 8.842358 TCGTTAGACCAGTGATTTTATTTTCT 57.158 30.769 0.00 0.00 0.00 2.52
591 615 9.280174 TCGTTAGACCAGTGATTTTATTTTCTT 57.720 29.630 0.00 0.00 0.00 2.52
592 616 9.893305 CGTTAGACCAGTGATTTTATTTTCTTT 57.107 29.630 0.00 0.00 0.00 2.52
596 620 9.045223 AGACCAGTGATTTTATTTTCTTTTTGC 57.955 29.630 0.00 0.00 0.00 3.68
597 621 7.850501 ACCAGTGATTTTATTTTCTTTTTGCG 58.149 30.769 0.00 0.00 0.00 4.85
598 622 7.042119 ACCAGTGATTTTATTTTCTTTTTGCGG 60.042 33.333 0.00 0.00 0.00 5.69
599 623 7.290118 CAGTGATTTTATTTTCTTTTTGCGGG 58.710 34.615 0.00 0.00 0.00 6.13
600 624 6.426633 AGTGATTTTATTTTCTTTTTGCGGGG 59.573 34.615 0.00 0.00 0.00 5.73
601 625 5.180304 TGATTTTATTTTCTTTTTGCGGGGC 59.820 36.000 0.00 0.00 0.00 5.80
602 626 2.355717 TATTTTCTTTTTGCGGGGCG 57.644 45.000 0.00 0.00 0.00 6.13
603 627 0.391228 ATTTTCTTTTTGCGGGGCGT 59.609 45.000 0.00 0.00 0.00 5.68
604 628 0.175989 TTTTCTTTTTGCGGGGCGTT 59.824 45.000 0.00 0.00 0.00 4.84
605 629 1.030457 TTTCTTTTTGCGGGGCGTTA 58.970 45.000 0.00 0.00 0.00 3.18
606 630 0.594110 TTCTTTTTGCGGGGCGTTAG 59.406 50.000 0.00 0.00 0.00 2.34
607 631 1.211709 CTTTTTGCGGGGCGTTAGG 59.788 57.895 0.00 0.00 0.00 2.69
608 632 2.812542 CTTTTTGCGGGGCGTTAGGC 62.813 60.000 0.00 0.00 42.96 3.93
618 642 2.986311 GCGTTAGGCCGATGATTCA 58.014 52.632 0.00 0.00 34.80 2.57
619 643 0.582005 GCGTTAGGCCGATGATTCAC 59.418 55.000 0.00 0.00 34.80 3.18
620 644 1.934589 CGTTAGGCCGATGATTCACA 58.065 50.000 0.00 0.00 0.00 3.58
622 646 2.213499 GTTAGGCCGATGATTCACAGG 58.787 52.381 0.00 5.19 0.00 4.00
626 650 1.522355 CCGATGATTCACAGGCGCT 60.522 57.895 7.64 0.00 0.00 5.92
633 657 1.129437 GATTCACAGGCGCTTTCACTC 59.871 52.381 7.64 0.00 0.00 3.51
635 659 1.302033 CACAGGCGCTTTCACTCCT 60.302 57.895 7.64 0.00 0.00 3.69
638 662 0.519077 CAGGCGCTTTCACTCCTTTC 59.481 55.000 7.64 0.00 0.00 2.62
640 664 0.519077 GGCGCTTTCACTCCTTTCTG 59.481 55.000 7.64 0.00 0.00 3.02
645 669 4.154195 GCGCTTTCACTCCTTTCTGAATTA 59.846 41.667 0.00 0.00 0.00 1.40
646 670 5.163713 GCGCTTTCACTCCTTTCTGAATTAT 60.164 40.000 0.00 0.00 0.00 1.28
647 671 6.253746 CGCTTTCACTCCTTTCTGAATTATG 58.746 40.000 0.00 0.00 0.00 1.90
648 672 6.092670 CGCTTTCACTCCTTTCTGAATTATGA 59.907 38.462 0.00 0.00 0.00 2.15
649 673 7.201679 CGCTTTCACTCCTTTCTGAATTATGAT 60.202 37.037 0.00 0.00 0.00 2.45
650 674 7.914346 GCTTTCACTCCTTTCTGAATTATGATG 59.086 37.037 0.00 0.00 0.00 3.07
651 675 8.868522 TTTCACTCCTTTCTGAATTATGATGT 57.131 30.769 0.00 0.00 0.00 3.06
652 676 7.854557 TCACTCCTTTCTGAATTATGATGTG 57.145 36.000 0.00 0.00 0.00 3.21
654 678 8.539544 TCACTCCTTTCTGAATTATGATGTGTA 58.460 33.333 0.00 0.00 0.00 2.90
655 679 9.334947 CACTCCTTTCTGAATTATGATGTGTAT 57.665 33.333 0.00 0.00 0.00 2.29
656 680 9.911788 ACTCCTTTCTGAATTATGATGTGTATT 57.088 29.630 0.00 0.00 0.00 1.89
659 683 9.740239 CCTTTCTGAATTATGATGTGTATTTGG 57.260 33.333 0.00 0.00 0.00 3.28
662 686 7.706159 TCTGAATTATGATGTGTATTTGGTGC 58.294 34.615 0.00 0.00 0.00 5.01
663 687 7.338957 TCTGAATTATGATGTGTATTTGGTGCA 59.661 33.333 0.00 0.00 0.00 4.57
664 688 7.482474 TGAATTATGATGTGTATTTGGTGCAG 58.518 34.615 0.00 0.00 0.00 4.41
666 690 4.707030 ATGATGTGTATTTGGTGCAGTG 57.293 40.909 0.00 0.00 0.00 3.66
668 692 4.140536 TGATGTGTATTTGGTGCAGTGAA 58.859 39.130 0.00 0.00 0.00 3.18
669 693 4.766373 TGATGTGTATTTGGTGCAGTGAAT 59.234 37.500 0.00 0.00 0.00 2.57
670 694 5.942826 TGATGTGTATTTGGTGCAGTGAATA 59.057 36.000 0.00 0.00 0.00 1.75
671 695 6.602803 TGATGTGTATTTGGTGCAGTGAATAT 59.397 34.615 0.00 0.00 0.00 1.28
672 696 6.193514 TGTGTATTTGGTGCAGTGAATATG 57.806 37.500 0.00 0.00 0.00 1.78
674 698 6.029607 GTGTATTTGGTGCAGTGAATATGTG 58.970 40.000 0.00 0.00 0.00 3.21
676 700 6.881602 TGTATTTGGTGCAGTGAATATGTGTA 59.118 34.615 0.00 0.00 0.00 2.90
678 702 4.551702 TGGTGCAGTGAATATGTGTAGT 57.448 40.909 0.00 0.00 0.00 2.73
679 703 5.669164 TGGTGCAGTGAATATGTGTAGTA 57.331 39.130 0.00 0.00 0.00 1.82
680 704 5.660460 TGGTGCAGTGAATATGTGTAGTAG 58.340 41.667 0.00 0.00 0.00 2.57
681 705 5.186992 TGGTGCAGTGAATATGTGTAGTAGT 59.813 40.000 0.00 0.00 0.00 2.73
682 706 6.106673 GGTGCAGTGAATATGTGTAGTAGTT 58.893 40.000 0.00 0.00 0.00 2.24
683 707 6.594159 GGTGCAGTGAATATGTGTAGTAGTTT 59.406 38.462 0.00 0.00 0.00 2.66
684 708 7.119262 GGTGCAGTGAATATGTGTAGTAGTTTT 59.881 37.037 0.00 0.00 0.00 2.43
685 709 7.957484 GTGCAGTGAATATGTGTAGTAGTTTTG 59.043 37.037 0.00 0.00 0.00 2.44
686 710 7.659799 TGCAGTGAATATGTGTAGTAGTTTTGT 59.340 33.333 0.00 0.00 0.00 2.83
711 735 9.490663 GTAAAAAGAAATGTTCATCTCATACGG 57.509 33.333 0.00 0.00 0.00 4.02
712 736 7.921786 AAAAGAAATGTTCATCTCATACGGA 57.078 32.000 0.00 0.00 0.00 4.69
713 737 6.910536 AAGAAATGTTCATCTCATACGGAC 57.089 37.500 0.00 0.00 0.00 4.79
720 744 7.634671 TGTTCATCTCATACGGACTAGTTAA 57.365 36.000 0.00 0.00 0.00 2.01
727 751 8.701908 TCTCATACGGACTAGTTAATATGGTT 57.298 34.615 15.61 0.00 0.00 3.67
752 776 6.892658 TTATGGATGTATATTTGGTGTGCC 57.107 37.500 0.00 0.00 0.00 5.01
753 777 4.518278 TGGATGTATATTTGGTGTGCCT 57.482 40.909 0.00 0.00 35.27 4.75
770 794 6.294731 GGTGTGCCTTTAATGTGAGAAAAGAT 60.295 38.462 0.00 0.00 33.05 2.40
772 796 6.489700 TGTGCCTTTAATGTGAGAAAAGATCA 59.510 34.615 0.00 0.00 33.05 2.92
773 797 7.014134 TGTGCCTTTAATGTGAGAAAAGATCAA 59.986 33.333 0.00 0.00 33.05 2.57
774 798 7.867403 GTGCCTTTAATGTGAGAAAAGATCAAA 59.133 33.333 0.00 0.00 33.05 2.69
775 799 8.420222 TGCCTTTAATGTGAGAAAAGATCAAAA 58.580 29.630 0.00 0.00 33.05 2.44
780 804 9.683069 TTAATGTGAGAAAAGATCAAAAGAAGC 57.317 29.630 0.00 0.00 0.00 3.86
781 805 6.698008 TGTGAGAAAAGATCAAAAGAAGCA 57.302 33.333 0.00 0.00 0.00 3.91
782 806 7.281040 TGTGAGAAAAGATCAAAAGAAGCAT 57.719 32.000 0.00 0.00 0.00 3.79
783 807 7.719483 TGTGAGAAAAGATCAAAAGAAGCATT 58.281 30.769 0.00 0.00 0.00 3.56
816 840 5.248870 TGAGAAAAGAAAAGGAGCACAAC 57.751 39.130 0.00 0.00 0.00 3.32
824 848 6.076981 AGAAAAGGAGCACAACTGTATTTG 57.923 37.500 0.00 0.00 0.00 2.32
825 849 4.853924 AAAGGAGCACAACTGTATTTGG 57.146 40.909 0.00 0.00 0.00 3.28
826 850 2.795329 AGGAGCACAACTGTATTTGGG 58.205 47.619 0.00 0.00 32.58 4.12
827 851 2.108250 AGGAGCACAACTGTATTTGGGT 59.892 45.455 0.00 0.00 31.99 4.51
828 852 2.890945 GGAGCACAACTGTATTTGGGTT 59.109 45.455 0.00 0.00 31.99 4.11
829 853 3.305335 GGAGCACAACTGTATTTGGGTTG 60.305 47.826 0.00 0.00 43.84 3.77
885 909 0.936691 CCAAATCCCCATTCCCCTCT 59.063 55.000 0.00 0.00 0.00 3.69
890 914 1.238896 TCCCCATTCCCCTCTCCTCT 61.239 60.000 0.00 0.00 0.00 3.69
900 924 1.522900 CCTCTCCTCTCCTCTCCTCT 58.477 60.000 0.00 0.00 0.00 3.69
901 925 1.421646 CCTCTCCTCTCCTCTCCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
902 926 1.421646 CTCTCCTCTCCTCTCCTCTCC 59.578 61.905 0.00 0.00 0.00 3.71
903 927 1.010793 TCTCCTCTCCTCTCCTCTCCT 59.989 57.143 0.00 0.00 0.00 3.69
904 928 1.852965 CTCCTCTCCTCTCCTCTCCTT 59.147 57.143 0.00 0.00 0.00 3.36
905 929 1.568597 TCCTCTCCTCTCCTCTCCTTG 59.431 57.143 0.00 0.00 0.00 3.61
915 939 0.108898 CCTCTCCTTGCAGTGAGTCG 60.109 60.000 12.61 6.91 0.00 4.18
939 963 1.892862 GCTCTCGCCTAGTCGCCTA 60.893 63.158 0.00 0.00 0.00 3.93
971 995 4.715130 TCCCCACCCCTCTCACCG 62.715 72.222 0.00 0.00 0.00 4.94
1059 1088 3.724914 CTCCGCCTTCTTCGCCTCC 62.725 68.421 0.00 0.00 0.00 4.30
1132 1170 3.069980 GACGACGCCCTCATGCTCT 62.070 63.158 0.00 0.00 0.00 4.09
1134 1172 2.107953 GACGCCCTCATGCTCTCC 59.892 66.667 0.00 0.00 0.00 3.71
1202 1246 4.148825 CGCCGACAAGGAGGAGGG 62.149 72.222 0.00 0.00 45.00 4.30
1246 1290 3.925090 CCGTATGACCCGCTCCCC 61.925 72.222 0.00 0.00 0.00 4.81
1247 1291 3.151710 CGTATGACCCGCTCCCCA 61.152 66.667 0.00 0.00 0.00 4.96
1249 1293 2.039787 TATGACCCGCTCCCCACA 59.960 61.111 0.00 0.00 0.00 4.17
1250 1294 1.383943 TATGACCCGCTCCCCACAT 60.384 57.895 0.00 0.00 0.00 3.21
1282 1583 1.298190 GCGTACGCCTTACTCCTCG 60.298 63.158 29.51 0.00 34.56 4.63
1283 1584 1.986575 GCGTACGCCTTACTCCTCGT 61.987 60.000 29.51 0.00 38.75 4.18
1284 1585 0.027324 CGTACGCCTTACTCCTCGTC 59.973 60.000 0.52 0.00 36.50 4.20
1285 1586 0.380024 GTACGCCTTACTCCTCGTCC 59.620 60.000 0.00 0.00 36.50 4.79
1286 1587 0.749454 TACGCCTTACTCCTCGTCCC 60.749 60.000 0.00 0.00 36.50 4.46
1287 1588 2.806237 GCCTTACTCCTCGTCCCG 59.194 66.667 0.00 0.00 0.00 5.14
1288 1589 2.050934 GCCTTACTCCTCGTCCCGT 61.051 63.158 0.00 0.00 0.00 5.28
1289 1590 2.002509 GCCTTACTCCTCGTCCCGTC 62.003 65.000 0.00 0.00 0.00 4.79
1290 1591 0.394080 CCTTACTCCTCGTCCCGTCT 60.394 60.000 0.00 0.00 0.00 4.18
1291 1592 0.733729 CTTACTCCTCGTCCCGTCTG 59.266 60.000 0.00 0.00 0.00 3.51
1292 1593 0.325933 TTACTCCTCGTCCCGTCTGA 59.674 55.000 0.00 0.00 0.00 3.27
1337 1641 2.158928 AGATCTGATGAACTGCTGCTCC 60.159 50.000 0.00 0.00 0.00 4.70
1500 1857 0.594028 TTCGTAGCGGATCGATGTGC 60.594 55.000 0.54 6.49 36.01 4.57
1509 1866 0.946221 GATCGATGTGCCGGATGGAC 60.946 60.000 5.05 0.00 37.49 4.02
1529 1886 9.072375 GATGGACGATGGATCAATCTCTATATA 57.928 37.037 8.48 0.00 0.00 0.86
1530 1887 9.599056 ATGGACGATGGATCAATCTCTATATAT 57.401 33.333 8.48 0.00 0.00 0.86
1531 1888 9.072375 TGGACGATGGATCAATCTCTATATATC 57.928 37.037 8.48 0.00 0.00 1.63
1562 1923 0.040058 AATTGCTGCCCTGTGGATGA 59.960 50.000 0.00 0.00 0.00 2.92
1563 1924 0.040058 ATTGCTGCCCTGTGGATGAA 59.960 50.000 0.00 0.00 0.00 2.57
1564 1925 0.040058 TTGCTGCCCTGTGGATGAAT 59.960 50.000 0.00 0.00 0.00 2.57
1565 1926 0.681887 TGCTGCCCTGTGGATGAATG 60.682 55.000 0.00 0.00 0.00 2.67
1566 1927 0.394762 GCTGCCCTGTGGATGAATGA 60.395 55.000 0.00 0.00 0.00 2.57
1669 2030 6.990939 CACAGCATATAATAGATCCCTGATGG 59.009 42.308 0.00 0.00 0.00 3.51
1682 2043 2.390696 CCTGATGGATGAAAATGGCCA 58.609 47.619 8.56 8.56 34.57 5.36
1686 2047 4.031611 TGATGGATGAAAATGGCCAATGA 58.968 39.130 10.96 0.00 33.51 2.57
1694 2055 5.071370 TGAAAATGGCCAATGAAATGCTTT 58.929 33.333 10.96 0.00 0.00 3.51
1716 2077 9.603298 GCTTTCAAATGATTTCTTTGATTTTCC 57.397 29.630 0.00 0.00 41.03 3.13
1719 2080 7.167535 TCAAATGATTTCTTTGATTTTCCCCC 58.832 34.615 0.00 0.00 37.61 5.40
1740 2112 5.195940 CCCCTCATGTCTTAATGATTGTGT 58.804 41.667 0.00 0.00 36.03 3.72
1741 2113 5.066893 CCCCTCATGTCTTAATGATTGTGTG 59.933 44.000 0.00 0.00 36.03 3.82
1745 2117 6.788243 TCATGTCTTAATGATTGTGTGATGC 58.212 36.000 0.00 0.00 31.58 3.91
1746 2118 5.565592 TGTCTTAATGATTGTGTGATGCC 57.434 39.130 0.00 0.00 0.00 4.40
1747 2119 4.398988 TGTCTTAATGATTGTGTGATGCCC 59.601 41.667 0.00 0.00 0.00 5.36
1752 2124 2.527497 TGATTGTGTGATGCCCAATGT 58.473 42.857 0.00 0.00 0.00 2.71
1754 2126 4.085009 TGATTGTGTGATGCCCAATGTAA 58.915 39.130 0.00 0.00 0.00 2.41
1755 2127 4.710865 TGATTGTGTGATGCCCAATGTAAT 59.289 37.500 0.00 0.00 0.00 1.89
1757 2129 2.166050 TGTGTGATGCCCAATGTAATGC 59.834 45.455 0.00 0.00 0.00 3.56
1761 2133 2.159071 TGATGCCCAATGTAATGCTTGC 60.159 45.455 0.00 0.00 0.00 4.01
1762 2134 1.264295 TGCCCAATGTAATGCTTGCA 58.736 45.000 0.00 0.00 0.00 4.08
1763 2135 1.832366 TGCCCAATGTAATGCTTGCAT 59.168 42.857 1.81 1.81 37.60 3.96
1764 2136 3.029570 TGCCCAATGTAATGCTTGCATA 58.970 40.909 8.61 0.00 34.80 3.14
1765 2137 3.642377 TGCCCAATGTAATGCTTGCATAT 59.358 39.130 8.61 2.67 34.80 1.78
1766 2138 3.991773 GCCCAATGTAATGCTTGCATATG 59.008 43.478 8.61 0.00 34.80 1.78
1767 2139 4.501915 GCCCAATGTAATGCTTGCATATGT 60.502 41.667 8.61 0.00 34.80 2.29
1768 2140 5.603596 CCCAATGTAATGCTTGCATATGTT 58.396 37.500 8.61 0.00 34.80 2.71
1769 2141 5.464057 CCCAATGTAATGCTTGCATATGTTG 59.536 40.000 8.61 10.79 34.80 3.33
1770 2142 6.044046 CCAATGTAATGCTTGCATATGTTGT 58.956 36.000 8.61 0.00 34.80 3.32
1771 2143 6.199531 CCAATGTAATGCTTGCATATGTTGTC 59.800 38.462 8.61 0.00 34.80 3.18
1772 2144 5.247507 TGTAATGCTTGCATATGTTGTCC 57.752 39.130 8.61 0.00 0.00 4.02
1773 2145 4.704057 TGTAATGCTTGCATATGTTGTCCA 59.296 37.500 8.61 0.00 0.00 4.02
1774 2146 3.788333 ATGCTTGCATATGTTGTCCAC 57.212 42.857 6.28 0.00 0.00 4.02
1775 2147 2.794103 TGCTTGCATATGTTGTCCACT 58.206 42.857 4.29 0.00 0.00 4.00
1776 2148 2.749076 TGCTTGCATATGTTGTCCACTC 59.251 45.455 4.29 0.00 0.00 3.51
1777 2149 3.012518 GCTTGCATATGTTGTCCACTCT 58.987 45.455 4.29 0.00 0.00 3.24
1778 2150 3.064545 GCTTGCATATGTTGTCCACTCTC 59.935 47.826 4.29 0.00 0.00 3.20
1779 2151 3.266510 TGCATATGTTGTCCACTCTCC 57.733 47.619 4.29 0.00 0.00 3.71
1780 2152 2.571202 TGCATATGTTGTCCACTCTCCA 59.429 45.455 4.29 0.00 0.00 3.86
1781 2153 2.939103 GCATATGTTGTCCACTCTCCAC 59.061 50.000 4.29 0.00 0.00 4.02
1782 2154 3.369892 GCATATGTTGTCCACTCTCCACT 60.370 47.826 4.29 0.00 0.00 4.00
1783 2155 4.437239 CATATGTTGTCCACTCTCCACTC 58.563 47.826 0.00 0.00 0.00 3.51
1784 2156 2.088104 TGTTGTCCACTCTCCACTCT 57.912 50.000 0.00 0.00 0.00 3.24
1785 2157 2.398588 TGTTGTCCACTCTCCACTCTT 58.601 47.619 0.00 0.00 0.00 2.85
1786 2158 2.103094 TGTTGTCCACTCTCCACTCTTG 59.897 50.000 0.00 0.00 0.00 3.02
1787 2159 1.342074 TGTCCACTCTCCACTCTTGG 58.658 55.000 0.00 0.00 45.56 3.61
1788 2160 1.343069 GTCCACTCTCCACTCTTGGT 58.657 55.000 0.00 0.00 44.35 3.67
1789 2161 1.273886 GTCCACTCTCCACTCTTGGTC 59.726 57.143 0.00 0.00 44.35 4.02
1790 2162 1.133167 TCCACTCTCCACTCTTGGTCA 60.133 52.381 0.00 0.00 44.35 4.02
1791 2163 1.694150 CCACTCTCCACTCTTGGTCAA 59.306 52.381 0.00 0.00 44.35 3.18
1792 2164 2.104792 CCACTCTCCACTCTTGGTCAAA 59.895 50.000 0.00 0.00 44.35 2.69
1793 2165 3.244700 CCACTCTCCACTCTTGGTCAAAT 60.245 47.826 0.00 0.00 44.35 2.32
1794 2166 4.020218 CCACTCTCCACTCTTGGTCAAATA 60.020 45.833 0.00 0.00 44.35 1.40
1795 2167 5.338708 CCACTCTCCACTCTTGGTCAAATAT 60.339 44.000 0.00 0.00 44.35 1.28
1796 2168 5.583854 CACTCTCCACTCTTGGTCAAATATG 59.416 44.000 0.00 0.00 44.35 1.78
1797 2169 5.485353 ACTCTCCACTCTTGGTCAAATATGA 59.515 40.000 0.00 0.00 44.35 2.15
1798 2170 6.157645 ACTCTCCACTCTTGGTCAAATATGAT 59.842 38.462 0.00 0.00 44.35 2.45
1799 2171 7.345653 ACTCTCCACTCTTGGTCAAATATGATA 59.654 37.037 0.00 0.00 44.35 2.15
1800 2172 7.500992 TCTCCACTCTTGGTCAAATATGATAC 58.499 38.462 0.00 0.00 44.35 2.24
1801 2173 7.345653 TCTCCACTCTTGGTCAAATATGATACT 59.654 37.037 0.00 0.00 44.35 2.12
1802 2174 8.547481 TCCACTCTTGGTCAAATATGATACTA 57.453 34.615 0.00 0.00 44.35 1.82
1803 2175 8.421784 TCCACTCTTGGTCAAATATGATACTAC 58.578 37.037 0.00 0.00 44.35 2.73
1804 2176 8.204160 CCACTCTTGGTCAAATATGATACTACA 58.796 37.037 0.00 0.00 38.23 2.74
1805 2177 9.599866 CACTCTTGGTCAAATATGATACTACAA 57.400 33.333 0.00 0.00 38.01 2.41
1832 2204 9.799106 AATAATCTATGGGGTATTGAAGAACTG 57.201 33.333 0.00 0.00 0.00 3.16
1833 2205 5.036117 TCTATGGGGTATTGAAGAACTGC 57.964 43.478 0.00 0.00 0.00 4.40
1834 2206 3.737559 ATGGGGTATTGAAGAACTGCA 57.262 42.857 0.00 0.00 0.00 4.41
1835 2207 3.737559 TGGGGTATTGAAGAACTGCAT 57.262 42.857 0.00 0.00 0.00 3.96
1836 2208 3.355378 TGGGGTATTGAAGAACTGCATG 58.645 45.455 0.00 0.00 0.00 4.06
1837 2209 3.245229 TGGGGTATTGAAGAACTGCATGT 60.245 43.478 0.00 0.00 0.00 3.21
1838 2210 3.129287 GGGGTATTGAAGAACTGCATGTG 59.871 47.826 0.00 0.00 0.00 3.21
1839 2211 3.758554 GGGTATTGAAGAACTGCATGTGT 59.241 43.478 0.00 0.00 0.00 3.72
1840 2212 4.218417 GGGTATTGAAGAACTGCATGTGTT 59.782 41.667 6.04 6.04 0.00 3.32
1841 2213 5.278957 GGGTATTGAAGAACTGCATGTGTTT 60.279 40.000 7.46 0.00 0.00 2.83
1842 2214 5.858581 GGTATTGAAGAACTGCATGTGTTTC 59.141 40.000 7.46 2.03 0.00 2.78
1843 2215 3.607422 TGAAGAACTGCATGTGTTTCG 57.393 42.857 7.46 0.00 0.00 3.46
1844 2216 2.942376 TGAAGAACTGCATGTGTTTCGT 59.058 40.909 7.46 0.53 0.00 3.85
1845 2217 3.002246 TGAAGAACTGCATGTGTTTCGTC 59.998 43.478 7.46 8.64 0.00 4.20
1846 2218 2.560504 AGAACTGCATGTGTTTCGTCA 58.439 42.857 7.46 0.00 0.00 4.35
1847 2219 3.141398 AGAACTGCATGTGTTTCGTCAT 58.859 40.909 7.46 0.00 0.00 3.06
1848 2220 3.187227 AGAACTGCATGTGTTTCGTCATC 59.813 43.478 7.46 0.00 0.00 2.92
1849 2221 1.460743 ACTGCATGTGTTTCGTCATCG 59.539 47.619 0.00 0.00 38.55 3.84
1850 2222 1.460743 CTGCATGTGTTTCGTCATCGT 59.539 47.619 0.00 0.00 38.33 3.73
1851 2223 1.194322 TGCATGTGTTTCGTCATCGTG 59.806 47.619 0.00 0.00 38.33 4.35
1852 2224 1.194547 GCATGTGTTTCGTCATCGTGT 59.805 47.619 0.00 0.00 38.33 4.49
1853 2225 2.349438 GCATGTGTTTCGTCATCGTGTT 60.349 45.455 0.00 0.00 38.33 3.32
1854 2226 3.120820 GCATGTGTTTCGTCATCGTGTTA 60.121 43.478 0.00 0.00 38.33 2.41
1855 2227 4.609559 GCATGTGTTTCGTCATCGTGTTAA 60.610 41.667 0.00 0.00 38.33 2.01
1856 2228 5.617609 CATGTGTTTCGTCATCGTGTTAAT 58.382 37.500 0.00 0.00 38.33 1.40
1857 2229 5.012655 TGTGTTTCGTCATCGTGTTAATG 57.987 39.130 0.00 0.00 38.33 1.90
1858 2230 4.508492 TGTGTTTCGTCATCGTGTTAATGT 59.492 37.500 0.00 0.00 38.33 2.71
1859 2231 4.838642 GTGTTTCGTCATCGTGTTAATGTG 59.161 41.667 0.00 0.00 38.33 3.21
1860 2232 4.508492 TGTTTCGTCATCGTGTTAATGTGT 59.492 37.500 0.00 0.00 38.33 3.72
1861 2233 5.690857 TGTTTCGTCATCGTGTTAATGTGTA 59.309 36.000 0.00 0.00 38.33 2.90
1862 2234 6.366604 TGTTTCGTCATCGTGTTAATGTGTAT 59.633 34.615 0.00 0.00 38.33 2.29
1863 2235 7.541437 TGTTTCGTCATCGTGTTAATGTGTATA 59.459 33.333 0.00 0.00 38.33 1.47
1864 2236 7.440541 TTCGTCATCGTGTTAATGTGTATAC 57.559 36.000 0.00 0.00 38.33 1.47
1865 2237 6.788243 TCGTCATCGTGTTAATGTGTATACT 58.212 36.000 4.17 0.00 38.33 2.12
1866 2238 6.908820 TCGTCATCGTGTTAATGTGTATACTC 59.091 38.462 4.17 0.83 38.33 2.59
1867 2239 6.141844 CGTCATCGTGTTAATGTGTATACTCC 59.858 42.308 4.17 0.00 0.00 3.85
1868 2240 7.201145 GTCATCGTGTTAATGTGTATACTCCT 58.799 38.462 4.17 0.00 0.00 3.69
1869 2241 8.347771 GTCATCGTGTTAATGTGTATACTCCTA 58.652 37.037 4.17 0.00 0.00 2.94
1870 2242 9.074576 TCATCGTGTTAATGTGTATACTCCTAT 57.925 33.333 4.17 0.00 0.00 2.57
1884 2256 9.064706 TGTATACTCCTATAAACAGAGTACTGC 57.935 37.037 0.00 0.00 46.95 4.40
1885 2257 9.064706 GTATACTCCTATAAACAGAGTACTGCA 57.935 37.037 0.00 0.00 46.95 4.41
1886 2258 8.713708 ATACTCCTATAAACAGAGTACTGCAT 57.286 34.615 0.00 0.00 46.95 3.96
1887 2259 7.045126 ACTCCTATAAACAGAGTACTGCATC 57.955 40.000 0.00 0.00 46.95 3.91
1888 2260 6.073327 TCCTATAAACAGAGTACTGCATCG 57.927 41.667 0.00 0.00 46.95 3.84
1889 2261 5.009710 TCCTATAAACAGAGTACTGCATCGG 59.990 44.000 0.00 0.00 46.95 4.18
1890 2262 5.009710 CCTATAAACAGAGTACTGCATCGGA 59.990 44.000 0.00 0.00 46.95 4.55
1891 2263 2.656560 AACAGAGTACTGCATCGGAC 57.343 50.000 0.00 0.00 46.95 4.79
1892 2264 0.452184 ACAGAGTACTGCATCGGACG 59.548 55.000 0.00 0.00 46.95 4.79
1893 2265 0.248661 CAGAGTACTGCATCGGACGG 60.249 60.000 0.00 0.00 37.33 4.79
1894 2266 0.680280 AGAGTACTGCATCGGACGGT 60.680 55.000 0.00 0.00 0.00 4.83
1895 2267 0.172803 GAGTACTGCATCGGACGGTT 59.827 55.000 0.00 0.00 0.00 4.44
1896 2268 0.172803 AGTACTGCATCGGACGGTTC 59.827 55.000 0.00 0.00 0.00 3.62
1897 2269 0.108992 GTACTGCATCGGACGGTTCA 60.109 55.000 0.00 0.00 0.00 3.18
1898 2270 0.108992 TACTGCATCGGACGGTTCAC 60.109 55.000 0.00 0.00 0.00 3.18
1899 2271 1.079819 CTGCATCGGACGGTTCACT 60.080 57.895 0.00 0.00 0.00 3.41
1900 2272 1.354337 CTGCATCGGACGGTTCACTG 61.354 60.000 0.00 0.00 0.00 3.66
1901 2273 2.740714 GCATCGGACGGTTCACTGC 61.741 63.158 0.00 0.00 0.00 4.40
1902 2274 1.374125 CATCGGACGGTTCACTGCA 60.374 57.895 0.00 0.00 0.00 4.41
1903 2275 0.740868 CATCGGACGGTTCACTGCAT 60.741 55.000 0.00 0.00 0.00 3.96
1904 2276 0.821517 ATCGGACGGTTCACTGCATA 59.178 50.000 0.00 0.00 0.00 3.14
1905 2277 0.108992 TCGGACGGTTCACTGCATAC 60.109 55.000 0.00 0.00 0.00 2.39
1906 2278 0.389296 CGGACGGTTCACTGCATACA 60.389 55.000 0.00 0.00 0.00 2.29
1907 2279 1.739035 CGGACGGTTCACTGCATACAT 60.739 52.381 0.00 0.00 0.00 2.29
1908 2280 1.665679 GGACGGTTCACTGCATACATG 59.334 52.381 0.00 0.00 0.00 3.21
1909 2281 2.616960 GACGGTTCACTGCATACATGA 58.383 47.619 0.00 0.00 0.00 3.07
1910 2282 3.198068 GACGGTTCACTGCATACATGAT 58.802 45.455 0.00 0.00 0.00 2.45
1911 2283 2.938451 ACGGTTCACTGCATACATGATG 59.062 45.455 0.00 0.00 38.73 3.07
1912 2284 3.197265 CGGTTCACTGCATACATGATGA 58.803 45.455 0.00 0.00 37.82 2.92
1913 2285 3.001634 CGGTTCACTGCATACATGATGAC 59.998 47.826 0.00 0.00 37.82 3.06
1914 2286 3.940852 GGTTCACTGCATACATGATGACA 59.059 43.478 0.00 1.77 37.82 3.58
1915 2287 4.577693 GGTTCACTGCATACATGATGACAT 59.422 41.667 0.00 0.00 37.82 3.06
1916 2288 5.759763 GGTTCACTGCATACATGATGACATA 59.240 40.000 0.00 0.00 37.82 2.29
1917 2289 6.293081 GGTTCACTGCATACATGATGACATAC 60.293 42.308 0.00 0.00 37.82 2.39
1918 2290 5.299949 TCACTGCATACATGATGACATACC 58.700 41.667 0.00 0.00 37.82 2.73
1919 2291 4.453478 CACTGCATACATGATGACATACCC 59.547 45.833 0.00 0.00 37.82 3.69
1920 2292 4.349048 ACTGCATACATGATGACATACCCT 59.651 41.667 0.00 0.00 37.82 4.34
1921 2293 4.644498 TGCATACATGATGACATACCCTG 58.356 43.478 0.00 0.00 37.82 4.45
1922 2294 4.102996 TGCATACATGATGACATACCCTGT 59.897 41.667 0.00 0.00 42.15 4.00
1923 2295 5.306678 TGCATACATGATGACATACCCTGTA 59.693 40.000 0.00 0.00 38.54 2.74
1924 2296 6.013466 TGCATACATGATGACATACCCTGTAT 60.013 38.462 0.00 0.00 38.54 2.29
1925 2297 6.536582 GCATACATGATGACATACCCTGTATC 59.463 42.308 0.00 0.00 38.54 2.24
1926 2298 5.139435 ACATGATGACATACCCTGTATCG 57.861 43.478 0.00 0.00 38.54 2.92
1927 2299 4.588951 ACATGATGACATACCCTGTATCGT 59.411 41.667 0.00 0.00 38.54 3.73
1928 2300 4.848562 TGATGACATACCCTGTATCGTC 57.151 45.455 0.00 0.00 38.54 4.20
1929 2301 3.572682 TGATGACATACCCTGTATCGTCC 59.427 47.826 0.00 0.00 38.54 4.79
1930 2302 3.021177 TGACATACCCTGTATCGTCCA 57.979 47.619 11.05 0.00 38.54 4.02
1931 2303 2.956333 TGACATACCCTGTATCGTCCAG 59.044 50.000 11.05 0.00 38.54 3.86
1932 2304 3.220110 GACATACCCTGTATCGTCCAGA 58.780 50.000 0.00 0.00 38.54 3.86
1933 2305 3.223435 ACATACCCTGTATCGTCCAGAG 58.777 50.000 0.00 0.00 35.91 3.35
1934 2306 3.117625 ACATACCCTGTATCGTCCAGAGA 60.118 47.826 0.00 0.00 35.91 3.10
1935 2307 2.526888 ACCCTGTATCGTCCAGAGAA 57.473 50.000 0.00 0.00 31.38 2.87
1936 2308 2.100989 ACCCTGTATCGTCCAGAGAAC 58.899 52.381 0.00 0.00 31.38 3.01
1937 2309 2.291670 ACCCTGTATCGTCCAGAGAACT 60.292 50.000 0.00 0.00 31.38 3.01
1938 2310 3.053842 ACCCTGTATCGTCCAGAGAACTA 60.054 47.826 0.00 0.00 31.38 2.24
1939 2311 3.952323 CCCTGTATCGTCCAGAGAACTAA 59.048 47.826 0.00 0.00 31.38 2.24
1940 2312 4.202030 CCCTGTATCGTCCAGAGAACTAAC 60.202 50.000 0.00 0.00 31.38 2.34
1941 2313 4.641094 CCTGTATCGTCCAGAGAACTAACT 59.359 45.833 0.00 0.00 31.38 2.24
1942 2314 5.821470 CCTGTATCGTCCAGAGAACTAACTA 59.179 44.000 0.00 0.00 31.38 2.24
1943 2315 6.238429 CCTGTATCGTCCAGAGAACTAACTAC 60.238 46.154 0.00 0.00 31.38 2.73
1944 2316 6.175471 TGTATCGTCCAGAGAACTAACTACA 58.825 40.000 0.00 0.00 0.00 2.74
1945 2317 6.827251 TGTATCGTCCAGAGAACTAACTACAT 59.173 38.462 0.00 0.00 0.00 2.29
1946 2318 5.814764 TCGTCCAGAGAACTAACTACATC 57.185 43.478 0.00 0.00 0.00 3.06
1947 2319 4.639310 TCGTCCAGAGAACTAACTACATCC 59.361 45.833 0.00 0.00 0.00 3.51
1948 2320 4.398358 CGTCCAGAGAACTAACTACATCCA 59.602 45.833 0.00 0.00 0.00 3.41
1949 2321 5.067936 CGTCCAGAGAACTAACTACATCCAT 59.932 44.000 0.00 0.00 0.00 3.41
1950 2322 6.276847 GTCCAGAGAACTAACTACATCCATG 58.723 44.000 0.00 0.00 0.00 3.66
1951 2323 6.096987 GTCCAGAGAACTAACTACATCCATGA 59.903 42.308 0.00 0.00 0.00 3.07
1952 2324 6.667848 TCCAGAGAACTAACTACATCCATGAA 59.332 38.462 0.00 0.00 0.00 2.57
1953 2325 7.345653 TCCAGAGAACTAACTACATCCATGAAT 59.654 37.037 0.00 0.00 0.00 2.57
1954 2326 7.655328 CCAGAGAACTAACTACATCCATGAATC 59.345 40.741 0.00 0.00 0.00 2.52
1955 2327 7.380870 CAGAGAACTAACTACATCCATGAATCG 59.619 40.741 0.00 0.00 0.00 3.34
1956 2328 5.986135 AGAACTAACTACATCCATGAATCGC 59.014 40.000 0.00 0.00 0.00 4.58
1957 2329 5.537300 ACTAACTACATCCATGAATCGCT 57.463 39.130 0.00 0.00 0.00 4.93
1958 2330 5.918608 ACTAACTACATCCATGAATCGCTT 58.081 37.500 0.00 0.00 0.00 4.68
1959 2331 6.349300 ACTAACTACATCCATGAATCGCTTT 58.651 36.000 0.00 0.00 0.00 3.51
1960 2332 5.741388 AACTACATCCATGAATCGCTTTC 57.259 39.130 0.00 0.00 34.72 2.62
1961 2333 4.130118 ACTACATCCATGAATCGCTTTCC 58.870 43.478 0.00 0.00 33.04 3.13
1962 2334 3.287867 ACATCCATGAATCGCTTTCCT 57.712 42.857 0.00 0.00 33.04 3.36
1963 2335 2.947652 ACATCCATGAATCGCTTTCCTG 59.052 45.455 0.00 0.00 33.04 3.86
1964 2336 2.787473 TCCATGAATCGCTTTCCTGT 57.213 45.000 0.00 0.00 33.04 4.00
1965 2337 2.632377 TCCATGAATCGCTTTCCTGTC 58.368 47.619 0.00 0.00 33.04 3.51
1966 2338 2.027285 TCCATGAATCGCTTTCCTGTCA 60.027 45.455 0.00 0.00 33.04 3.58
1967 2339 2.947652 CCATGAATCGCTTTCCTGTCAT 59.052 45.455 0.00 0.00 33.04 3.06
1968 2340 3.379372 CCATGAATCGCTTTCCTGTCATT 59.621 43.478 0.00 0.00 33.04 2.57
1969 2341 4.576053 CCATGAATCGCTTTCCTGTCATTA 59.424 41.667 0.00 0.00 33.04 1.90
1970 2342 5.240183 CCATGAATCGCTTTCCTGTCATTAT 59.760 40.000 0.00 0.00 33.04 1.28
1971 2343 6.427853 CCATGAATCGCTTTCCTGTCATTATA 59.572 38.462 0.00 0.00 33.04 0.98
1972 2344 7.120285 CCATGAATCGCTTTCCTGTCATTATAT 59.880 37.037 0.00 0.00 33.04 0.86
1973 2345 7.425577 TGAATCGCTTTCCTGTCATTATATG 57.574 36.000 0.00 0.00 33.04 1.78
1974 2346 7.216494 TGAATCGCTTTCCTGTCATTATATGA 58.784 34.615 0.00 0.00 33.30 2.15
1975 2347 7.879677 TGAATCGCTTTCCTGTCATTATATGAT 59.120 33.333 0.00 0.00 36.17 2.45
1976 2348 7.606858 ATCGCTTTCCTGTCATTATATGATG 57.393 36.000 1.04 1.04 42.04 3.07
1977 2349 6.758254 TCGCTTTCCTGTCATTATATGATGA 58.242 36.000 6.09 6.09 42.04 2.92
1978 2350 7.389232 TCGCTTTCCTGTCATTATATGATGAT 58.611 34.615 12.80 0.00 42.04 2.45
1979 2351 7.332678 TCGCTTTCCTGTCATTATATGATGATG 59.667 37.037 12.80 9.17 42.04 3.07
1980 2352 7.413767 CGCTTTCCTGTCATTATATGATGATGG 60.414 40.741 12.80 16.10 42.04 3.51
1981 2353 7.609146 GCTTTCCTGTCATTATATGATGATGGA 59.391 37.037 20.86 20.86 42.04 3.41
1982 2354 8.853077 TTTCCTGTCATTATATGATGATGGAC 57.147 34.615 22.81 10.50 42.04 4.02
1983 2355 7.557875 TCCTGTCATTATATGATGATGGACA 57.442 36.000 20.86 12.25 42.04 4.02
1984 2356 8.154420 TCCTGTCATTATATGATGATGGACAT 57.846 34.615 20.86 0.00 42.04 3.06
1985 2357 8.044908 TCCTGTCATTATATGATGATGGACATG 58.955 37.037 20.86 10.90 42.04 3.21
1986 2358 7.827729 CCTGTCATTATATGATGATGGACATGT 59.172 37.037 19.01 0.00 42.04 3.21
1987 2359 9.227777 CTGTCATTATATGATGATGGACATGTT 57.772 33.333 12.80 0.00 42.04 2.71
1988 2360 9.005777 TGTCATTATATGATGATGGACATGTTG 57.994 33.333 12.80 0.00 42.04 3.33
1989 2361 9.223099 GTCATTATATGATGATGGACATGTTGA 57.777 33.333 12.80 0.00 42.04 3.18
1990 2362 9.796180 TCATTATATGATGATGGACATGTTGAA 57.204 29.630 6.09 0.00 39.56 2.69
1994 2366 6.635030 ATGATGATGGACATGTTGAAGATG 57.365 37.500 0.00 0.26 39.56 2.90
1995 2367 4.337274 TGATGATGGACATGTTGAAGATGC 59.663 41.667 0.00 0.00 39.56 3.91
1996 2368 3.688235 TGATGGACATGTTGAAGATGCA 58.312 40.909 0.00 0.00 0.00 3.96
1997 2369 3.441222 TGATGGACATGTTGAAGATGCAC 59.559 43.478 0.00 0.00 0.00 4.57
1998 2370 3.144657 TGGACATGTTGAAGATGCACT 57.855 42.857 0.00 0.00 0.00 4.40
1999 2371 3.489355 TGGACATGTTGAAGATGCACTT 58.511 40.909 0.00 0.00 42.03 3.16
2000 2372 3.253921 TGGACATGTTGAAGATGCACTTG 59.746 43.478 0.00 0.00 39.13 3.16
2001 2373 3.254166 GGACATGTTGAAGATGCACTTGT 59.746 43.478 0.00 0.00 39.13 3.16
2002 2374 4.261741 GGACATGTTGAAGATGCACTTGTT 60.262 41.667 0.00 0.00 39.13 2.83
2003 2375 4.613944 ACATGTTGAAGATGCACTTGTTG 58.386 39.130 1.85 1.34 39.13 3.33
2004 2376 4.338964 ACATGTTGAAGATGCACTTGTTGA 59.661 37.500 1.85 0.00 39.13 3.18
2005 2377 4.979943 TGTTGAAGATGCACTTGTTGAA 57.020 36.364 6.31 0.00 39.13 2.69
2006 2378 4.923893 TGTTGAAGATGCACTTGTTGAAG 58.076 39.130 6.31 0.00 39.13 3.02
2007 2379 4.398988 TGTTGAAGATGCACTTGTTGAAGT 59.601 37.500 6.31 0.00 43.63 3.01
2017 2389 4.568152 ACTTGTTGAAGTGGTTGTATGC 57.432 40.909 0.00 0.00 41.12 3.14
2018 2390 4.207165 ACTTGTTGAAGTGGTTGTATGCT 58.793 39.130 0.00 0.00 41.12 3.79
2027 2399 4.003648 AGTGGTTGTATGCTTCAGTTAGC 58.996 43.478 0.00 0.00 41.59 3.09
2028 2400 3.127030 GTGGTTGTATGCTTCAGTTAGCC 59.873 47.826 0.00 0.00 40.49 3.93
2033 2405 6.990349 GGTTGTATGCTTCAGTTAGCCTATTA 59.010 38.462 0.00 0.00 40.49 0.98
2039 2411 8.608844 ATGCTTCAGTTAGCCTATTATTGTAC 57.391 34.615 0.00 0.00 40.49 2.90
2040 2412 7.561251 TGCTTCAGTTAGCCTATTATTGTACA 58.439 34.615 0.00 0.00 40.49 2.90
2068 2446 3.127895 AGTTCTGTAGCTGTGTCGAGATC 59.872 47.826 0.00 0.00 0.00 2.75
2081 2459 0.039617 CGAGATCGATCTGGTGGCTC 60.040 60.000 31.88 14.63 43.02 4.70
2092 2470 1.191489 TGGTGGCTCTCGTGATTGGA 61.191 55.000 0.00 0.00 0.00 3.53
2109 2487 7.438160 CGTGATTGGACTAAGCTTGTTCATATA 59.562 37.037 9.86 0.00 0.00 0.86
2111 2489 9.109393 TGATTGGACTAAGCTTGTTCATATAAC 57.891 33.333 9.86 0.00 0.00 1.89
2133 2511 4.340617 CCAATTGGTAGGGTTTTGCTCTA 58.659 43.478 16.90 0.00 0.00 2.43
2134 2512 4.399303 CCAATTGGTAGGGTTTTGCTCTAG 59.601 45.833 16.90 0.00 29.18 2.43
2135 2513 5.253330 CAATTGGTAGGGTTTTGCTCTAGA 58.747 41.667 0.00 0.00 29.18 2.43
2136 2514 3.975168 TGGTAGGGTTTTGCTCTAGAC 57.025 47.619 0.00 0.00 29.18 2.59
2137 2515 3.517612 TGGTAGGGTTTTGCTCTAGACT 58.482 45.455 0.00 0.00 29.18 3.24
2138 2516 3.260884 TGGTAGGGTTTTGCTCTAGACTG 59.739 47.826 0.00 0.00 29.18 3.51
2139 2517 3.261137 GGTAGGGTTTTGCTCTAGACTGT 59.739 47.826 0.00 0.00 29.18 3.55
2142 2530 3.391296 AGGGTTTTGCTCTAGACTGTTGA 59.609 43.478 0.00 0.00 0.00 3.18
2144 2532 3.184581 GGTTTTGCTCTAGACTGTTGACG 59.815 47.826 0.00 0.00 0.00 4.35
2155 2543 3.057734 GACTGTTGACGAAGATCCGTTT 58.942 45.455 0.00 0.00 43.49 3.60
2158 2546 3.659786 TGTTGACGAAGATCCGTTTGAT 58.340 40.909 0.00 0.00 43.49 2.57
2159 2547 4.811908 TGTTGACGAAGATCCGTTTGATA 58.188 39.130 0.00 0.00 43.49 2.15
2170 2558 1.131126 CCGTTTGATAGTGCTTGCCTG 59.869 52.381 0.00 0.00 0.00 4.85
2171 2559 1.806542 CGTTTGATAGTGCTTGCCTGT 59.193 47.619 0.00 0.00 0.00 4.00
2172 2560 2.226437 CGTTTGATAGTGCTTGCCTGTT 59.774 45.455 0.00 0.00 0.00 3.16
2211 2599 5.940192 TTATGCTTGTCCTGTAACTTGTG 57.060 39.130 0.00 0.00 0.00 3.33
2222 2610 1.130561 GTAACTTGTGGCGGATTGCTC 59.869 52.381 0.00 0.00 45.43 4.26
2230 2618 0.946221 GGCGGATTGCTCTATGTCGG 60.946 60.000 0.00 0.00 45.43 4.79
2231 2619 0.032130 GCGGATTGCTCTATGTCGGA 59.968 55.000 0.00 0.00 41.73 4.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 76 5.280521 GGGGGATTCTCTGACTTTTGAGTAA 60.281 44.000 0.00 0.00 0.00 2.24
79 83 4.635473 TCATAGGGGGATTCTCTGACTTT 58.365 43.478 0.00 0.00 0.00 2.66
134 139 3.976704 CCAGCTGGGTCCAAATGTA 57.023 52.632 26.14 0.00 0.00 2.29
148 157 4.518249 AGAAGTTACAATAGCTTCCCAGC 58.482 43.478 8.34 0.00 44.16 4.85
151 160 6.037281 GCACTTAGAAGTTACAATAGCTTCCC 59.963 42.308 8.34 0.00 44.16 3.97
162 171 4.406001 GCAAGGTGCACTTAGAAGTTAC 57.594 45.455 17.98 0.00 44.26 2.50
190 199 1.902918 GTGGCCACTTGGATGTGCA 60.903 57.895 29.12 0.00 36.68 4.57
191 200 2.639327 GGTGGCCACTTGGATGTGC 61.639 63.158 33.91 11.44 36.68 4.57
195 204 1.488705 TTCGAGGTGGCCACTTGGAT 61.489 55.000 33.91 15.71 37.39 3.41
266 281 2.639065 TGAAGAGAAAGTTGCGGTTGT 58.361 42.857 0.00 0.00 0.00 3.32
270 285 1.069906 CGGTTGAAGAGAAAGTTGCGG 60.070 52.381 0.00 0.00 0.00 5.69
294 309 1.111277 GTGTTTGGTGGTGGCTCTTT 58.889 50.000 0.00 0.00 0.00 2.52
299 314 2.411290 CACGTGTTTGGTGGTGGC 59.589 61.111 7.58 0.00 0.00 5.01
314 329 2.614057 CCGCTTCATAATTCACCTCCAC 59.386 50.000 0.00 0.00 0.00 4.02
315 330 2.421388 CCCGCTTCATAATTCACCTCCA 60.421 50.000 0.00 0.00 0.00 3.86
318 333 1.064758 TGCCCGCTTCATAATTCACCT 60.065 47.619 0.00 0.00 0.00 4.00
349 364 1.005097 TGGGCTCATCATCTTGTTGCT 59.995 47.619 0.00 0.00 0.00 3.91
350 365 1.466856 TGGGCTCATCATCTTGTTGC 58.533 50.000 0.00 0.00 0.00 4.17
366 381 2.788640 CCTCCATTTGCCGCATGGG 61.789 63.158 12.17 2.06 41.58 4.00
376 391 2.436646 CCGCACGCTCCTCCATTT 60.437 61.111 0.00 0.00 0.00 2.32
397 414 1.444553 CTCGTCGGCTTGTCACTCC 60.445 63.158 0.00 0.00 0.00 3.85
401 418 0.599204 GTTTCCTCGTCGGCTTGTCA 60.599 55.000 0.00 0.00 0.00 3.58
413 430 0.467290 TGCCCCTTGTGTGTTTCCTC 60.467 55.000 0.00 0.00 0.00 3.71
414 431 0.032615 TTGCCCCTTGTGTGTTTCCT 60.033 50.000 0.00 0.00 0.00 3.36
415 432 0.389025 CTTGCCCCTTGTGTGTTTCC 59.611 55.000 0.00 0.00 0.00 3.13
416 433 1.398692 TCTTGCCCCTTGTGTGTTTC 58.601 50.000 0.00 0.00 0.00 2.78
417 434 2.086610 ATCTTGCCCCTTGTGTGTTT 57.913 45.000 0.00 0.00 0.00 2.83
418 435 2.086610 AATCTTGCCCCTTGTGTGTT 57.913 45.000 0.00 0.00 0.00 3.32
419 436 2.086610 AAATCTTGCCCCTTGTGTGT 57.913 45.000 0.00 0.00 0.00 3.72
420 437 3.473923 AAAAATCTTGCCCCTTGTGTG 57.526 42.857 0.00 0.00 0.00 3.82
449 466 2.671963 GTGCCCCACCCTTTCGAC 60.672 66.667 0.00 0.00 0.00 4.20
450 467 3.172106 TGTGCCCCACCCTTTCGA 61.172 61.111 0.00 0.00 32.73 3.71
461 478 1.577328 CGTGTTGGACATCTGTGCCC 61.577 60.000 0.00 0.00 35.36 5.36
468 485 2.173382 GCACGCGTGTTGGACATC 59.827 61.111 36.80 16.46 0.00 3.06
469 486 2.280797 AGCACGCGTGTTGGACAT 60.281 55.556 36.80 13.98 0.00 3.06
475 492 2.671177 GCATCAGAGCACGCGTGTT 61.671 57.895 36.80 33.20 0.00 3.32
476 493 3.114616 GCATCAGAGCACGCGTGT 61.115 61.111 36.80 24.72 0.00 4.49
516 540 1.010462 GGTTTTGCGGTGTGACGAC 60.010 57.895 0.00 0.00 35.47 4.34
517 541 1.153329 AGGTTTTGCGGTGTGACGA 60.153 52.632 0.00 0.00 35.47 4.20
518 542 1.157870 AGAGGTTTTGCGGTGTGACG 61.158 55.000 0.00 0.00 0.00 4.35
519 543 0.586802 GAGAGGTTTTGCGGTGTGAC 59.413 55.000 0.00 0.00 0.00 3.67
520 544 0.534203 GGAGAGGTTTTGCGGTGTGA 60.534 55.000 0.00 0.00 0.00 3.58
521 545 1.841663 CGGAGAGGTTTTGCGGTGTG 61.842 60.000 0.00 0.00 0.00 3.82
522 546 1.597027 CGGAGAGGTTTTGCGGTGT 60.597 57.895 0.00 0.00 0.00 4.16
523 547 2.966309 GCGGAGAGGTTTTGCGGTG 61.966 63.158 0.00 0.00 0.00 4.94
524 548 2.668550 GCGGAGAGGTTTTGCGGT 60.669 61.111 0.00 0.00 0.00 5.68
525 549 2.040544 ATGCGGAGAGGTTTTGCGG 61.041 57.895 0.00 0.00 0.00 5.69
526 550 1.135315 CATGCGGAGAGGTTTTGCG 59.865 57.895 0.00 0.00 0.00 4.85
527 551 1.153958 GCATGCGGAGAGGTTTTGC 60.154 57.895 0.00 0.00 0.00 3.68
528 552 1.508088 GGCATGCGGAGAGGTTTTG 59.492 57.895 12.44 0.00 0.00 2.44
529 553 2.040544 CGGCATGCGGAGAGGTTTT 61.041 57.895 19.74 0.00 0.00 2.43
530 554 2.436646 CGGCATGCGGAGAGGTTT 60.437 61.111 19.74 0.00 0.00 3.27
551 575 2.149803 TAACGAGAGGGTGTGTGGCG 62.150 60.000 0.00 0.00 0.00 5.69
552 576 0.389948 CTAACGAGAGGGTGTGTGGC 60.390 60.000 0.00 0.00 0.00 5.01
566 590 9.893305 AAAGAAAATAAAATCACTGGTCTAACG 57.107 29.630 0.00 0.00 0.00 3.18
575 599 6.426633 CCCCGCAAAAAGAAAATAAAATCACT 59.573 34.615 0.00 0.00 0.00 3.41
576 600 6.598525 CCCCGCAAAAAGAAAATAAAATCAC 58.401 36.000 0.00 0.00 0.00 3.06
577 601 5.180304 GCCCCGCAAAAAGAAAATAAAATCA 59.820 36.000 0.00 0.00 0.00 2.57
581 605 3.060602 CGCCCCGCAAAAAGAAAATAAA 58.939 40.909 0.00 0.00 0.00 1.40
582 606 2.036089 ACGCCCCGCAAAAAGAAAATAA 59.964 40.909 0.00 0.00 0.00 1.40
583 607 1.614413 ACGCCCCGCAAAAAGAAAATA 59.386 42.857 0.00 0.00 0.00 1.40
584 608 0.391228 ACGCCCCGCAAAAAGAAAAT 59.609 45.000 0.00 0.00 0.00 1.82
585 609 0.175989 AACGCCCCGCAAAAAGAAAA 59.824 45.000 0.00 0.00 0.00 2.29
586 610 1.001158 CTAACGCCCCGCAAAAAGAAA 60.001 47.619 0.00 0.00 0.00 2.52
587 611 0.594110 CTAACGCCCCGCAAAAAGAA 59.406 50.000 0.00 0.00 0.00 2.52
588 612 1.238625 CCTAACGCCCCGCAAAAAGA 61.239 55.000 0.00 0.00 0.00 2.52
589 613 1.211709 CCTAACGCCCCGCAAAAAG 59.788 57.895 0.00 0.00 0.00 2.27
590 614 2.921797 GCCTAACGCCCCGCAAAAA 61.922 57.895 0.00 0.00 0.00 1.94
591 615 3.366915 GCCTAACGCCCCGCAAAA 61.367 61.111 0.00 0.00 0.00 2.44
600 624 0.582005 GTGAATCATCGGCCTAACGC 59.418 55.000 0.00 0.00 0.00 4.84
601 625 1.860950 CTGTGAATCATCGGCCTAACG 59.139 52.381 0.00 0.00 0.00 3.18
602 626 2.213499 CCTGTGAATCATCGGCCTAAC 58.787 52.381 0.00 0.00 0.00 2.34
603 627 1.475034 GCCTGTGAATCATCGGCCTAA 60.475 52.381 12.77 0.00 34.75 2.69
604 628 0.106708 GCCTGTGAATCATCGGCCTA 59.893 55.000 12.77 0.00 34.75 3.93
605 629 1.153086 GCCTGTGAATCATCGGCCT 60.153 57.895 12.77 0.00 34.75 5.19
606 630 2.537560 CGCCTGTGAATCATCGGCC 61.538 63.158 16.43 0.00 37.47 6.13
607 631 3.017323 CGCCTGTGAATCATCGGC 58.983 61.111 13.50 13.50 37.40 5.54
608 632 1.091771 AAGCGCCTGTGAATCATCGG 61.092 55.000 2.29 0.00 0.00 4.18
609 633 0.729116 AAAGCGCCTGTGAATCATCG 59.271 50.000 2.29 0.00 0.00 3.84
610 634 1.739466 TGAAAGCGCCTGTGAATCATC 59.261 47.619 2.29 0.00 0.00 2.92
611 635 1.470098 GTGAAAGCGCCTGTGAATCAT 59.530 47.619 2.29 0.00 0.00 2.45
612 636 0.874390 GTGAAAGCGCCTGTGAATCA 59.126 50.000 2.29 0.00 0.00 2.57
613 637 1.129437 GAGTGAAAGCGCCTGTGAATC 59.871 52.381 2.29 0.00 0.00 2.52
614 638 1.160137 GAGTGAAAGCGCCTGTGAAT 58.840 50.000 2.29 0.00 0.00 2.57
615 639 0.884704 GGAGTGAAAGCGCCTGTGAA 60.885 55.000 2.29 0.00 0.00 3.18
616 640 1.301716 GGAGTGAAAGCGCCTGTGA 60.302 57.895 2.29 0.00 0.00 3.58
617 641 0.886490 AAGGAGTGAAAGCGCCTGTG 60.886 55.000 2.29 0.00 38.66 3.66
618 642 0.179018 AAAGGAGTGAAAGCGCCTGT 60.179 50.000 2.29 0.00 38.66 4.00
619 643 0.519077 GAAAGGAGTGAAAGCGCCTG 59.481 55.000 2.29 0.00 38.66 4.85
620 644 0.398318 AGAAAGGAGTGAAAGCGCCT 59.602 50.000 2.29 0.00 40.41 5.52
622 646 1.512926 TCAGAAAGGAGTGAAAGCGC 58.487 50.000 0.00 0.00 0.00 5.92
626 650 8.733458 CACATCATAATTCAGAAAGGAGTGAAA 58.267 33.333 0.00 0.00 36.31 2.69
633 657 9.740239 CCAAATACACATCATAATTCAGAAAGG 57.260 33.333 0.00 0.00 0.00 3.11
638 662 7.482474 TGCACCAAATACACATCATAATTCAG 58.518 34.615 0.00 0.00 0.00 3.02
640 664 7.433131 CACTGCACCAAATACACATCATAATTC 59.567 37.037 0.00 0.00 0.00 2.17
645 669 4.334552 TCACTGCACCAAATACACATCAT 58.665 39.130 0.00 0.00 0.00 2.45
646 670 3.749226 TCACTGCACCAAATACACATCA 58.251 40.909 0.00 0.00 0.00 3.07
647 671 4.764679 TTCACTGCACCAAATACACATC 57.235 40.909 0.00 0.00 0.00 3.06
648 672 6.377996 ACATATTCACTGCACCAAATACACAT 59.622 34.615 0.00 0.00 0.00 3.21
649 673 5.709631 ACATATTCACTGCACCAAATACACA 59.290 36.000 0.00 0.00 0.00 3.72
650 674 6.029607 CACATATTCACTGCACCAAATACAC 58.970 40.000 0.00 0.00 0.00 2.90
651 675 5.709631 ACACATATTCACTGCACCAAATACA 59.290 36.000 0.00 0.00 0.00 2.29
652 676 6.194796 ACACATATTCACTGCACCAAATAC 57.805 37.500 0.00 0.00 0.00 1.89
654 678 5.945784 ACTACACATATTCACTGCACCAAAT 59.054 36.000 0.00 0.00 0.00 2.32
655 679 5.312895 ACTACACATATTCACTGCACCAAA 58.687 37.500 0.00 0.00 0.00 3.28
656 680 4.905429 ACTACACATATTCACTGCACCAA 58.095 39.130 0.00 0.00 0.00 3.67
657 681 4.551702 ACTACACATATTCACTGCACCA 57.448 40.909 0.00 0.00 0.00 4.17
658 682 5.661458 ACTACTACACATATTCACTGCACC 58.339 41.667 0.00 0.00 0.00 5.01
659 683 7.596749 AAACTACTACACATATTCACTGCAC 57.403 36.000 0.00 0.00 0.00 4.57
660 684 7.659799 ACAAAACTACTACACATATTCACTGCA 59.340 33.333 0.00 0.00 0.00 4.41
661 685 8.029642 ACAAAACTACTACACATATTCACTGC 57.970 34.615 0.00 0.00 0.00 4.40
685 709 9.490663 CCGTATGAGATGAACATTTCTTTTTAC 57.509 33.333 6.83 4.02 0.00 2.01
686 710 9.443323 TCCGTATGAGATGAACATTTCTTTTTA 57.557 29.630 6.83 0.00 0.00 1.52
694 718 6.716934 ACTAGTCCGTATGAGATGAACATT 57.283 37.500 0.00 0.00 0.00 2.71
700 724 8.740906 ACCATATTAACTAGTCCGTATGAGATG 58.259 37.037 16.70 4.34 0.00 2.90
701 725 8.880991 ACCATATTAACTAGTCCGTATGAGAT 57.119 34.615 16.70 5.59 0.00 2.75
702 726 8.701908 AACCATATTAACTAGTCCGTATGAGA 57.298 34.615 16.70 0.00 0.00 3.27
703 727 9.760077 AAAACCATATTAACTAGTCCGTATGAG 57.240 33.333 16.70 11.72 0.00 2.90
708 732 9.333724 CCATAAAAACCATATTAACTAGTCCGT 57.666 33.333 0.00 0.00 0.00 4.69
709 733 9.550406 TCCATAAAAACCATATTAACTAGTCCG 57.450 33.333 0.00 0.00 0.00 4.79
727 751 7.563188 AGGCACACCAAATATACATCCATAAAA 59.437 33.333 0.00 0.00 39.06 1.52
730 754 6.199557 AGGCACACCAAATATACATCCATA 57.800 37.500 0.00 0.00 39.06 2.74
739 763 6.663093 TCTCACATTAAAGGCACACCAAATAT 59.337 34.615 0.00 0.00 39.06 1.28
748 772 6.913170 TGATCTTTTCTCACATTAAAGGCAC 58.087 36.000 0.00 0.00 31.45 5.01
789 813 7.330262 TGTGCTCCTTTTCTTTTCTCATTTTT 58.670 30.769 0.00 0.00 0.00 1.94
790 814 6.877236 TGTGCTCCTTTTCTTTTCTCATTTT 58.123 32.000 0.00 0.00 0.00 1.82
791 815 6.469782 TGTGCTCCTTTTCTTTTCTCATTT 57.530 33.333 0.00 0.00 0.00 2.32
792 816 6.097412 AGTTGTGCTCCTTTTCTTTTCTCATT 59.903 34.615 0.00 0.00 0.00 2.57
793 817 5.595952 AGTTGTGCTCCTTTTCTTTTCTCAT 59.404 36.000 0.00 0.00 0.00 2.90
794 818 4.949856 AGTTGTGCTCCTTTTCTTTTCTCA 59.050 37.500 0.00 0.00 0.00 3.27
795 819 5.163612 ACAGTTGTGCTCCTTTTCTTTTCTC 60.164 40.000 0.00 0.00 0.00 2.87
796 820 4.706962 ACAGTTGTGCTCCTTTTCTTTTCT 59.293 37.500 0.00 0.00 0.00 2.52
797 821 4.998788 ACAGTTGTGCTCCTTTTCTTTTC 58.001 39.130 0.00 0.00 0.00 2.29
798 822 6.715347 ATACAGTTGTGCTCCTTTTCTTTT 57.285 33.333 0.00 0.00 0.00 2.27
799 823 6.715347 AATACAGTTGTGCTCCTTTTCTTT 57.285 33.333 0.00 0.00 0.00 2.52
802 826 5.222631 CCAAATACAGTTGTGCTCCTTTTC 58.777 41.667 0.00 0.00 0.00 2.29
805 829 3.157087 CCCAAATACAGTTGTGCTCCTT 58.843 45.455 0.00 0.00 0.00 3.36
816 840 1.899142 CCAACCCCAACCCAAATACAG 59.101 52.381 0.00 0.00 0.00 2.74
824 848 2.525629 CAACCCCAACCCCAACCC 60.526 66.667 0.00 0.00 0.00 4.11
825 849 2.525629 CCAACCCCAACCCCAACC 60.526 66.667 0.00 0.00 0.00 3.77
826 850 2.525629 CCCAACCCCAACCCCAAC 60.526 66.667 0.00 0.00 0.00 3.77
827 851 3.851184 CCCCAACCCCAACCCCAA 61.851 66.667 0.00 0.00 0.00 4.12
828 852 4.885449 TCCCCAACCCCAACCCCA 62.885 66.667 0.00 0.00 0.00 4.96
829 853 3.992641 CTCCCCAACCCCAACCCC 61.993 72.222 0.00 0.00 0.00 4.95
885 909 1.568597 CAAGGAGAGGAGAGGAGAGGA 59.431 57.143 0.00 0.00 0.00 3.71
890 914 0.411452 ACTGCAAGGAGAGGAGAGGA 59.589 55.000 0.00 0.00 39.30 3.71
900 924 0.598562 GAGACGACTCACTGCAAGGA 59.401 55.000 10.08 0.00 42.21 3.36
901 925 0.600557 AGAGACGACTCACTGCAAGG 59.399 55.000 16.96 0.00 44.79 3.61
902 926 1.695813 CAGAGACGACTCACTGCAAG 58.304 55.000 16.96 0.00 44.79 4.01
903 927 3.873805 CAGAGACGACTCACTGCAA 57.126 52.632 16.96 0.00 44.79 4.08
939 963 2.041819 GGAGGATGGGAGACGGGT 60.042 66.667 0.00 0.00 0.00 5.28
971 995 4.143333 TGCTCGCTAGGGTTCGGC 62.143 66.667 6.70 7.97 0.00 5.54
972 996 1.739338 ATCTGCTCGCTAGGGTTCGG 61.739 60.000 6.70 5.32 0.00 4.30
973 997 0.318275 GATCTGCTCGCTAGGGTTCG 60.318 60.000 6.70 0.00 0.00 3.95
974 998 0.318275 CGATCTGCTCGCTAGGGTTC 60.318 60.000 6.70 0.87 41.14 3.62
1118 1156 3.842923 CGGAGAGCATGAGGGCGT 61.843 66.667 0.00 0.00 39.27 5.68
1190 1234 2.612115 CCTGCCCCTCCTCCTTGT 60.612 66.667 0.00 0.00 0.00 3.16
1233 1277 2.692368 ATGTGGGGAGCGGGTCAT 60.692 61.111 9.66 0.00 0.00 3.06
1246 1290 0.309922 GCAAGCGATGGATGGATGTG 59.690 55.000 0.00 0.00 0.00 3.21
1247 1291 1.162181 CGCAAGCGATGGATGGATGT 61.162 55.000 9.11 0.00 42.83 3.06
1249 1293 0.392706 TACGCAAGCGATGGATGGAT 59.607 50.000 22.30 0.00 42.83 3.41
1250 1294 0.529773 GTACGCAAGCGATGGATGGA 60.530 55.000 22.30 0.00 42.83 3.41
1282 1583 2.675772 ACGGGACTCAGACGGGAC 60.676 66.667 0.00 0.00 0.00 4.46
1283 1584 2.360852 GACGGGACTCAGACGGGA 60.361 66.667 0.00 0.00 0.00 5.14
1284 1585 3.450115 GGACGGGACTCAGACGGG 61.450 72.222 0.00 0.00 0.00 5.28
1285 1586 3.812019 CGGACGGGACTCAGACGG 61.812 72.222 0.00 0.00 0.00 4.79
1286 1587 4.477975 GCGGACGGGACTCAGACG 62.478 72.222 0.00 0.00 0.00 4.18
1287 1588 4.477975 CGCGGACGGGACTCAGAC 62.478 72.222 0.00 0.00 34.97 3.51
1289 1590 4.477975 GACGCGGACGGGACTCAG 62.478 72.222 12.47 0.00 46.04 3.35
1309 1610 4.050553 GCAGTTCATCAGATCTAGAGCAC 58.949 47.826 11.20 0.00 0.00 4.40
1337 1641 2.808543 GCAGGATTTATTAGTCGGCCAG 59.191 50.000 2.24 0.00 0.00 4.85
1402 1721 1.327460 GGCATACACACACACGCATAG 59.673 52.381 0.00 0.00 0.00 2.23
1403 1722 1.338200 TGGCATACACACACACGCATA 60.338 47.619 0.00 0.00 0.00 3.14
1404 1723 0.605050 TGGCATACACACACACGCAT 60.605 50.000 0.00 0.00 0.00 4.73
1407 1750 0.447406 CCATGGCATACACACACACG 59.553 55.000 0.00 0.00 0.00 4.49
1500 1857 0.392706 TTGATCCATCGTCCATCCGG 59.607 55.000 0.00 0.00 0.00 5.14
1529 1886 4.491676 GCAGCAATTCAACAACAGATGAT 58.508 39.130 0.00 0.00 0.00 2.45
1530 1887 3.305539 GGCAGCAATTCAACAACAGATGA 60.306 43.478 0.00 0.00 0.00 2.92
1531 1888 2.991190 GGCAGCAATTCAACAACAGATG 59.009 45.455 0.00 0.00 0.00 2.90
1589 1950 0.385974 GCCATATGCCGCAAATCGAC 60.386 55.000 0.00 0.00 41.67 4.20
1669 2030 4.879545 AGCATTTCATTGGCCATTTTCATC 59.120 37.500 6.09 0.00 0.00 2.92
1716 2077 4.581824 CACAATCATTAAGACATGAGGGGG 59.418 45.833 0.00 0.00 36.60 5.40
1717 2078 5.066893 CACACAATCATTAAGACATGAGGGG 59.933 44.000 0.00 0.00 36.60 4.79
1719 2080 6.990341 TCACACAATCATTAAGACATGAGG 57.010 37.500 0.00 0.00 36.60 3.86
1721 2082 6.183360 GGCATCACACAATCATTAAGACATGA 60.183 38.462 0.00 0.00 37.58 3.07
1724 2085 4.398988 GGGCATCACACAATCATTAAGACA 59.601 41.667 0.00 0.00 0.00 3.41
1730 2091 3.516300 ACATTGGGCATCACACAATCATT 59.484 39.130 0.00 0.00 32.89 2.57
1740 2112 2.159071 GCAAGCATTACATTGGGCATCA 60.159 45.455 0.00 0.00 0.00 3.07
1741 2113 2.159071 TGCAAGCATTACATTGGGCATC 60.159 45.455 0.00 0.00 0.00 3.91
1745 2117 5.204409 ACATATGCAAGCATTACATTGGG 57.796 39.130 13.32 0.00 33.34 4.12
1746 2118 6.044046 ACAACATATGCAAGCATTACATTGG 58.956 36.000 13.32 0.93 33.34 3.16
1747 2119 6.199531 GGACAACATATGCAAGCATTACATTG 59.800 38.462 13.32 13.89 33.34 2.82
1752 2124 4.949238 AGTGGACAACATATGCAAGCATTA 59.051 37.500 13.32 0.21 37.82 1.90
1754 2126 3.359033 AGTGGACAACATATGCAAGCAT 58.641 40.909 12.66 12.66 40.19 3.79
1755 2127 2.749076 GAGTGGACAACATATGCAAGCA 59.251 45.455 1.58 0.00 0.00 3.91
1757 2129 3.624861 GGAGAGTGGACAACATATGCAAG 59.375 47.826 1.58 0.00 0.00 4.01
1761 2133 4.161189 AGAGTGGAGAGTGGACAACATATG 59.839 45.833 0.00 0.00 0.00 1.78
1762 2134 4.357325 AGAGTGGAGAGTGGACAACATAT 58.643 43.478 0.00 0.00 0.00 1.78
1763 2135 3.779444 AGAGTGGAGAGTGGACAACATA 58.221 45.455 0.00 0.00 0.00 2.29
1764 2136 2.614259 AGAGTGGAGAGTGGACAACAT 58.386 47.619 0.00 0.00 0.00 2.71
1765 2137 2.088104 AGAGTGGAGAGTGGACAACA 57.912 50.000 0.00 0.00 0.00 3.33
1766 2138 2.760374 CAAGAGTGGAGAGTGGACAAC 58.240 52.381 0.00 0.00 0.00 3.32
1779 2151 9.599866 TTGTAGTATCATATTTGACCAAGAGTG 57.400 33.333 0.00 0.00 33.85 3.51
1806 2178 9.799106 CAGTTCTTCAATACCCCATAGATTATT 57.201 33.333 0.00 0.00 0.00 1.40
1807 2179 7.885399 GCAGTTCTTCAATACCCCATAGATTAT 59.115 37.037 0.00 0.00 0.00 1.28
1808 2180 7.147391 TGCAGTTCTTCAATACCCCATAGATTA 60.147 37.037 0.00 0.00 0.00 1.75
1809 2181 6.064717 GCAGTTCTTCAATACCCCATAGATT 58.935 40.000 0.00 0.00 0.00 2.40
1810 2182 5.132648 TGCAGTTCTTCAATACCCCATAGAT 59.867 40.000 0.00 0.00 0.00 1.98
1811 2183 4.473196 TGCAGTTCTTCAATACCCCATAGA 59.527 41.667 0.00 0.00 0.00 1.98
1812 2184 4.780815 TGCAGTTCTTCAATACCCCATAG 58.219 43.478 0.00 0.00 0.00 2.23
1813 2185 4.853468 TGCAGTTCTTCAATACCCCATA 57.147 40.909 0.00 0.00 0.00 2.74
1814 2186 3.737559 TGCAGTTCTTCAATACCCCAT 57.262 42.857 0.00 0.00 0.00 4.00
1815 2187 3.245229 ACATGCAGTTCTTCAATACCCCA 60.245 43.478 0.00 0.00 0.00 4.96
1816 2188 3.129287 CACATGCAGTTCTTCAATACCCC 59.871 47.826 0.00 0.00 0.00 4.95
1817 2189 3.758554 ACACATGCAGTTCTTCAATACCC 59.241 43.478 0.00 0.00 0.00 3.69
1818 2190 5.376854 AACACATGCAGTTCTTCAATACC 57.623 39.130 0.00 0.00 0.00 2.73
1819 2191 5.565259 CGAAACACATGCAGTTCTTCAATAC 59.435 40.000 4.79 0.00 0.00 1.89
1820 2192 5.238432 ACGAAACACATGCAGTTCTTCAATA 59.762 36.000 4.79 0.00 0.00 1.90
1821 2193 4.036734 ACGAAACACATGCAGTTCTTCAAT 59.963 37.500 4.79 0.00 0.00 2.57
1822 2194 3.376859 ACGAAACACATGCAGTTCTTCAA 59.623 39.130 4.79 0.00 0.00 2.69
1823 2195 2.942376 ACGAAACACATGCAGTTCTTCA 59.058 40.909 4.79 0.00 0.00 3.02
1824 2196 3.002246 TGACGAAACACATGCAGTTCTTC 59.998 43.478 4.79 4.16 0.00 2.87
1825 2197 2.942376 TGACGAAACACATGCAGTTCTT 59.058 40.909 4.79 0.00 0.00 2.52
1826 2198 2.560504 TGACGAAACACATGCAGTTCT 58.439 42.857 4.79 0.00 0.00 3.01
1827 2199 3.482786 GATGACGAAACACATGCAGTTC 58.517 45.455 4.79 0.00 0.00 3.01
1828 2200 2.096268 CGATGACGAAACACATGCAGTT 60.096 45.455 0.00 0.00 42.66 3.16
1829 2201 1.460743 CGATGACGAAACACATGCAGT 59.539 47.619 0.00 0.00 42.66 4.40
1830 2202 1.460743 ACGATGACGAAACACATGCAG 59.539 47.619 0.00 0.00 42.66 4.41
1831 2203 1.194322 CACGATGACGAAACACATGCA 59.806 47.619 0.00 0.00 42.66 3.96
1832 2204 1.194547 ACACGATGACGAAACACATGC 59.805 47.619 0.00 0.00 42.66 4.06
1833 2205 3.519908 AACACGATGACGAAACACATG 57.480 42.857 0.00 0.00 42.66 3.21
1834 2206 5.178623 ACATTAACACGATGACGAAACACAT 59.821 36.000 0.00 0.00 42.66 3.21
1835 2207 4.508492 ACATTAACACGATGACGAAACACA 59.492 37.500 0.00 0.00 42.66 3.72
1836 2208 4.838642 CACATTAACACGATGACGAAACAC 59.161 41.667 0.00 0.00 42.66 3.32
1837 2209 4.508492 ACACATTAACACGATGACGAAACA 59.492 37.500 0.00 0.00 42.66 2.83
1838 2210 5.013861 ACACATTAACACGATGACGAAAC 57.986 39.130 0.00 0.00 42.66 2.78
1839 2211 6.954616 ATACACATTAACACGATGACGAAA 57.045 33.333 0.00 0.00 42.66 3.46
1840 2212 7.252708 AGTATACACATTAACACGATGACGAA 58.747 34.615 5.50 0.00 42.66 3.85
1841 2213 6.788243 AGTATACACATTAACACGATGACGA 58.212 36.000 5.50 0.00 42.66 4.20
1842 2214 6.141844 GGAGTATACACATTAACACGATGACG 59.858 42.308 5.50 0.00 45.75 4.35
1843 2215 7.201145 AGGAGTATACACATTAACACGATGAC 58.799 38.462 5.50 0.00 0.00 3.06
1844 2216 7.342769 AGGAGTATACACATTAACACGATGA 57.657 36.000 5.50 0.00 0.00 2.92
1858 2230 9.064706 GCAGTACTCTGTTTATAGGAGTATACA 57.935 37.037 5.50 0.00 42.19 2.29
1859 2231 9.064706 TGCAGTACTCTGTTTATAGGAGTATAC 57.935 37.037 0.00 0.00 42.19 1.47
1860 2232 9.809395 ATGCAGTACTCTGTTTATAGGAGTATA 57.191 33.333 0.00 0.00 42.19 1.47
1861 2233 8.713708 ATGCAGTACTCTGTTTATAGGAGTAT 57.286 34.615 0.00 0.00 42.19 2.12
1862 2234 7.041303 CGATGCAGTACTCTGTTTATAGGAGTA 60.041 40.741 0.00 0.00 43.05 2.59
1863 2235 6.238786 CGATGCAGTACTCTGTTTATAGGAGT 60.239 42.308 0.00 0.00 43.05 3.85
1864 2236 6.146216 CGATGCAGTACTCTGTTTATAGGAG 58.854 44.000 0.00 0.00 43.05 3.69
1865 2237 5.009710 CCGATGCAGTACTCTGTTTATAGGA 59.990 44.000 0.00 0.00 43.05 2.94
1866 2238 5.009710 TCCGATGCAGTACTCTGTTTATAGG 59.990 44.000 0.00 0.00 43.05 2.57
1867 2239 5.915758 GTCCGATGCAGTACTCTGTTTATAG 59.084 44.000 0.00 0.00 43.05 1.31
1868 2240 5.505159 CGTCCGATGCAGTACTCTGTTTATA 60.505 44.000 0.00 0.00 43.05 0.98
1869 2241 4.683832 GTCCGATGCAGTACTCTGTTTAT 58.316 43.478 0.00 0.00 43.05 1.40
1870 2242 3.427098 CGTCCGATGCAGTACTCTGTTTA 60.427 47.826 0.00 0.00 43.05 2.01
1871 2243 2.671351 CGTCCGATGCAGTACTCTGTTT 60.671 50.000 0.00 0.00 43.05 2.83
1872 2244 1.135373 CGTCCGATGCAGTACTCTGTT 60.135 52.381 0.00 0.00 43.05 3.16
1873 2245 0.452184 CGTCCGATGCAGTACTCTGT 59.548 55.000 0.00 0.00 43.05 3.41
1874 2246 0.248661 CCGTCCGATGCAGTACTCTG 60.249 60.000 0.00 0.00 43.87 3.35
1875 2247 0.680280 ACCGTCCGATGCAGTACTCT 60.680 55.000 0.00 0.00 0.00 3.24
1876 2248 0.172803 AACCGTCCGATGCAGTACTC 59.827 55.000 0.00 0.00 0.00 2.59
1877 2249 0.172803 GAACCGTCCGATGCAGTACT 59.827 55.000 0.00 0.00 0.00 2.73
1878 2250 0.108992 TGAACCGTCCGATGCAGTAC 60.109 55.000 0.00 0.00 0.00 2.73
1879 2251 0.108992 GTGAACCGTCCGATGCAGTA 60.109 55.000 0.00 0.00 0.00 2.74
1880 2252 1.374252 GTGAACCGTCCGATGCAGT 60.374 57.895 0.00 0.00 0.00 4.40
1881 2253 1.079819 AGTGAACCGTCCGATGCAG 60.080 57.895 0.00 0.00 0.00 4.41
1882 2254 1.374125 CAGTGAACCGTCCGATGCA 60.374 57.895 0.00 0.00 0.00 3.96
1883 2255 2.740714 GCAGTGAACCGTCCGATGC 61.741 63.158 0.00 0.00 0.00 3.91
1884 2256 0.740868 ATGCAGTGAACCGTCCGATG 60.741 55.000 0.00 0.00 0.00 3.84
1885 2257 0.821517 TATGCAGTGAACCGTCCGAT 59.178 50.000 0.00 0.00 0.00 4.18
1886 2258 0.108992 GTATGCAGTGAACCGTCCGA 60.109 55.000 0.00 0.00 0.00 4.55
1887 2259 0.389296 TGTATGCAGTGAACCGTCCG 60.389 55.000 0.00 0.00 0.00 4.79
1888 2260 1.665679 CATGTATGCAGTGAACCGTCC 59.334 52.381 0.00 0.00 0.00 4.79
1889 2261 2.616960 TCATGTATGCAGTGAACCGTC 58.383 47.619 0.00 0.00 0.00 4.79
1890 2262 2.760634 TCATGTATGCAGTGAACCGT 57.239 45.000 0.00 0.00 0.00 4.83
1891 2263 3.001634 GTCATCATGTATGCAGTGAACCG 59.998 47.826 0.00 0.00 35.38 4.44
1892 2264 3.940852 TGTCATCATGTATGCAGTGAACC 59.059 43.478 0.00 0.00 35.38 3.62
1893 2265 5.746307 ATGTCATCATGTATGCAGTGAAC 57.254 39.130 0.00 0.00 35.38 3.18
1894 2266 5.759763 GGTATGTCATCATGTATGCAGTGAA 59.240 40.000 0.00 0.00 35.38 3.18
1895 2267 5.299949 GGTATGTCATCATGTATGCAGTGA 58.700 41.667 0.00 0.00 35.38 3.41
1896 2268 4.453478 GGGTATGTCATCATGTATGCAGTG 59.547 45.833 0.00 0.00 35.38 3.66
1897 2269 4.349048 AGGGTATGTCATCATGTATGCAGT 59.651 41.667 0.00 0.00 35.38 4.40
1898 2270 4.694037 CAGGGTATGTCATCATGTATGCAG 59.306 45.833 0.00 0.00 35.38 4.41
1899 2271 4.102996 ACAGGGTATGTCATCATGTATGCA 59.897 41.667 0.00 0.00 37.75 3.96
1900 2272 4.645535 ACAGGGTATGTCATCATGTATGC 58.354 43.478 0.00 0.00 37.75 3.14
1901 2273 6.753744 CGATACAGGGTATGTCATCATGTATG 59.246 42.308 13.51 5.89 42.70 2.39
1902 2274 6.437477 ACGATACAGGGTATGTCATCATGTAT 59.563 38.462 10.10 10.10 42.70 2.29
1903 2275 5.773176 ACGATACAGGGTATGTCATCATGTA 59.227 40.000 0.00 2.62 42.70 2.29
1904 2276 4.588951 ACGATACAGGGTATGTCATCATGT 59.411 41.667 0.00 0.00 42.70 3.21
1905 2277 5.139435 ACGATACAGGGTATGTCATCATG 57.861 43.478 0.00 0.00 42.70 3.07
1906 2278 4.220821 GGACGATACAGGGTATGTCATCAT 59.779 45.833 14.72 0.00 42.70 2.45
1907 2279 3.572682 GGACGATACAGGGTATGTCATCA 59.427 47.826 14.72 0.00 42.70 3.07
1908 2280 3.572682 TGGACGATACAGGGTATGTCATC 59.427 47.826 14.72 0.00 42.70 2.92
1909 2281 3.572642 TGGACGATACAGGGTATGTCAT 58.427 45.455 14.72 0.00 42.70 3.06
1910 2282 2.956333 CTGGACGATACAGGGTATGTCA 59.044 50.000 14.72 0.00 42.70 3.58
1911 2283 3.220110 TCTGGACGATACAGGGTATGTC 58.780 50.000 0.00 2.99 42.70 3.06
1912 2284 3.117625 TCTCTGGACGATACAGGGTATGT 60.118 47.826 0.00 0.00 46.45 2.29
1913 2285 3.487372 TCTCTGGACGATACAGGGTATG 58.513 50.000 0.00 0.00 37.68 2.39
1914 2286 3.878237 TCTCTGGACGATACAGGGTAT 57.122 47.619 0.00 0.00 37.68 2.73
1915 2287 3.053842 AGTTCTCTGGACGATACAGGGTA 60.054 47.826 0.00 0.00 37.68 3.69
1916 2288 2.100989 GTTCTCTGGACGATACAGGGT 58.899 52.381 0.00 0.00 37.68 4.34
1917 2289 2.379972 AGTTCTCTGGACGATACAGGG 58.620 52.381 0.00 0.00 37.79 4.45
1918 2290 4.641094 AGTTAGTTCTCTGGACGATACAGG 59.359 45.833 0.00 0.00 36.62 4.00
1919 2291 5.821516 AGTTAGTTCTCTGGACGATACAG 57.178 43.478 0.00 0.00 37.30 2.74
1920 2292 6.175471 TGTAGTTAGTTCTCTGGACGATACA 58.825 40.000 0.00 0.00 0.00 2.29
1921 2293 6.674694 TGTAGTTAGTTCTCTGGACGATAC 57.325 41.667 0.00 0.00 0.00 2.24
1922 2294 6.485984 GGATGTAGTTAGTTCTCTGGACGATA 59.514 42.308 0.00 0.00 0.00 2.92
1923 2295 5.299782 GGATGTAGTTAGTTCTCTGGACGAT 59.700 44.000 0.00 0.00 0.00 3.73
1924 2296 4.639310 GGATGTAGTTAGTTCTCTGGACGA 59.361 45.833 0.00 0.00 0.00 4.20
1925 2297 4.398358 TGGATGTAGTTAGTTCTCTGGACG 59.602 45.833 0.00 0.00 0.00 4.79
1926 2298 5.916661 TGGATGTAGTTAGTTCTCTGGAC 57.083 43.478 0.00 0.00 0.00 4.02
1927 2299 6.194967 TCATGGATGTAGTTAGTTCTCTGGA 58.805 40.000 0.00 0.00 0.00 3.86
1928 2300 6.471233 TCATGGATGTAGTTAGTTCTCTGG 57.529 41.667 0.00 0.00 0.00 3.86
1929 2301 7.380870 CGATTCATGGATGTAGTTAGTTCTCTG 59.619 40.741 0.00 0.00 0.00 3.35
1930 2302 7.429633 CGATTCATGGATGTAGTTAGTTCTCT 58.570 38.462 0.00 0.00 0.00 3.10
1931 2303 6.144724 GCGATTCATGGATGTAGTTAGTTCTC 59.855 42.308 0.00 0.00 0.00 2.87
1932 2304 5.986135 GCGATTCATGGATGTAGTTAGTTCT 59.014 40.000 0.00 0.00 0.00 3.01
1933 2305 5.986135 AGCGATTCATGGATGTAGTTAGTTC 59.014 40.000 0.00 0.00 0.00 3.01
1934 2306 5.918608 AGCGATTCATGGATGTAGTTAGTT 58.081 37.500 0.00 0.00 0.00 2.24
1935 2307 5.537300 AGCGATTCATGGATGTAGTTAGT 57.463 39.130 0.00 0.00 0.00 2.24
1936 2308 6.073548 GGAAAGCGATTCATGGATGTAGTTAG 60.074 42.308 0.00 0.00 39.98 2.34
1937 2309 5.758296 GGAAAGCGATTCATGGATGTAGTTA 59.242 40.000 0.00 0.00 39.98 2.24
1938 2310 4.576463 GGAAAGCGATTCATGGATGTAGTT 59.424 41.667 0.00 0.00 39.98 2.24
1939 2311 4.130118 GGAAAGCGATTCATGGATGTAGT 58.870 43.478 0.00 0.00 39.98 2.73
1940 2312 4.212847 CAGGAAAGCGATTCATGGATGTAG 59.787 45.833 10.77 0.00 44.15 2.74
1941 2313 4.129380 CAGGAAAGCGATTCATGGATGTA 58.871 43.478 10.77 0.00 44.15 2.29
1942 2314 2.947652 CAGGAAAGCGATTCATGGATGT 59.052 45.455 10.77 0.00 44.15 3.06
1943 2315 3.620929 CAGGAAAGCGATTCATGGATG 57.379 47.619 10.77 0.00 44.15 3.51
1948 2320 7.879677 TCATATAATGACAGGAAAGCGATTCAT 59.120 33.333 7.45 0.00 35.53 2.57
1949 2321 7.216494 TCATATAATGACAGGAAAGCGATTCA 58.784 34.615 7.45 0.00 35.53 2.57
1950 2322 7.658179 TCATATAATGACAGGAAAGCGATTC 57.342 36.000 0.00 0.00 33.59 2.52
1951 2323 7.879677 TCATCATATAATGACAGGAAAGCGATT 59.120 33.333 0.00 0.00 43.01 3.34
1952 2324 7.389232 TCATCATATAATGACAGGAAAGCGAT 58.611 34.615 0.00 0.00 43.01 4.58
1953 2325 6.758254 TCATCATATAATGACAGGAAAGCGA 58.242 36.000 0.00 0.00 43.01 4.93
1954 2326 7.413767 CCATCATCATATAATGACAGGAAAGCG 60.414 40.741 3.91 0.00 43.01 4.68
1955 2327 7.609146 TCCATCATCATATAATGACAGGAAAGC 59.391 37.037 8.71 0.00 43.01 3.51
1956 2328 8.944029 GTCCATCATCATATAATGACAGGAAAG 58.056 37.037 11.64 0.00 41.29 2.62
1957 2329 8.439172 TGTCCATCATCATATAATGACAGGAAA 58.561 33.333 11.64 5.91 41.29 3.13
1958 2330 7.976712 TGTCCATCATCATATAATGACAGGAA 58.023 34.615 11.64 3.31 41.29 3.36
1959 2331 7.557875 TGTCCATCATCATATAATGACAGGA 57.442 36.000 7.49 7.49 43.01 3.86
1960 2332 7.827729 ACATGTCCATCATCATATAATGACAGG 59.172 37.037 0.00 0.00 43.01 4.00
1961 2333 8.788325 ACATGTCCATCATCATATAATGACAG 57.212 34.615 0.00 0.00 43.01 3.51
1962 2334 9.005777 CAACATGTCCATCATCATATAATGACA 57.994 33.333 0.00 0.00 43.01 3.58
1963 2335 9.223099 TCAACATGTCCATCATCATATAATGAC 57.777 33.333 0.00 0.00 43.01 3.06
1964 2336 9.796180 TTCAACATGTCCATCATCATATAATGA 57.204 29.630 0.00 0.00 44.55 2.57
1968 2340 9.444600 CATCTTCAACATGTCCATCATCATATA 57.555 33.333 0.00 0.00 34.09 0.86
1969 2341 7.094334 GCATCTTCAACATGTCCATCATCATAT 60.094 37.037 0.00 0.00 34.09 1.78
1970 2342 6.206048 GCATCTTCAACATGTCCATCATCATA 59.794 38.462 0.00 0.00 34.09 2.15
1971 2343 5.009710 GCATCTTCAACATGTCCATCATCAT 59.990 40.000 0.00 0.00 34.09 2.45
1972 2344 4.337274 GCATCTTCAACATGTCCATCATCA 59.663 41.667 0.00 0.00 34.09 3.07
1973 2345 4.337274 TGCATCTTCAACATGTCCATCATC 59.663 41.667 0.00 0.00 34.09 2.92
1974 2346 4.097437 GTGCATCTTCAACATGTCCATCAT 59.903 41.667 0.00 0.00 37.22 2.45
1975 2347 3.441222 GTGCATCTTCAACATGTCCATCA 59.559 43.478 0.00 0.00 0.00 3.07
1976 2348 3.693085 AGTGCATCTTCAACATGTCCATC 59.307 43.478 0.00 0.00 0.00 3.51
1977 2349 3.693807 AGTGCATCTTCAACATGTCCAT 58.306 40.909 0.00 0.00 0.00 3.41
1978 2350 3.144657 AGTGCATCTTCAACATGTCCA 57.855 42.857 0.00 0.00 0.00 4.02
1979 2351 3.254166 ACAAGTGCATCTTCAACATGTCC 59.746 43.478 0.00 0.00 33.63 4.02
1980 2352 4.494350 ACAAGTGCATCTTCAACATGTC 57.506 40.909 0.00 0.00 33.63 3.06
1981 2353 4.338964 TCAACAAGTGCATCTTCAACATGT 59.661 37.500 0.00 0.00 33.63 3.21
1982 2354 4.862350 TCAACAAGTGCATCTTCAACATG 58.138 39.130 0.00 0.00 33.63 3.21
1983 2355 5.068198 ACTTCAACAAGTGCATCTTCAACAT 59.932 36.000 0.00 0.00 41.64 2.71
1984 2356 4.398988 ACTTCAACAAGTGCATCTTCAACA 59.601 37.500 0.00 0.00 41.64 3.33
1985 2357 4.925068 ACTTCAACAAGTGCATCTTCAAC 58.075 39.130 0.00 0.00 41.64 3.18
1996 2368 4.207165 AGCATACAACCACTTCAACAAGT 58.793 39.130 0.00 0.00 44.26 3.16
1997 2369 4.836125 AGCATACAACCACTTCAACAAG 57.164 40.909 0.00 0.00 35.50 3.16
1998 2370 4.642437 TGAAGCATACAACCACTTCAACAA 59.358 37.500 2.01 0.00 43.99 2.83
1999 2371 4.203226 TGAAGCATACAACCACTTCAACA 58.797 39.130 2.01 0.00 43.99 3.33
2000 2372 4.275936 ACTGAAGCATACAACCACTTCAAC 59.724 41.667 5.86 0.00 45.63 3.18
2001 2373 4.460263 ACTGAAGCATACAACCACTTCAA 58.540 39.130 5.86 0.00 45.63 2.69
2002 2374 4.085357 ACTGAAGCATACAACCACTTCA 57.915 40.909 4.43 4.43 44.56 3.02
2003 2375 5.390991 GCTAACTGAAGCATACAACCACTTC 60.391 44.000 0.00 0.00 42.30 3.01
2004 2376 4.455877 GCTAACTGAAGCATACAACCACTT 59.544 41.667 0.00 0.00 42.30 3.16
2005 2377 4.003648 GCTAACTGAAGCATACAACCACT 58.996 43.478 0.00 0.00 42.30 4.00
2006 2378 3.127030 GGCTAACTGAAGCATACAACCAC 59.873 47.826 8.54 0.00 44.64 4.16
2007 2379 3.009033 AGGCTAACTGAAGCATACAACCA 59.991 43.478 8.54 0.00 44.64 3.67
2008 2380 3.610911 AGGCTAACTGAAGCATACAACC 58.389 45.455 8.54 0.00 44.64 3.77
2009 2381 6.927294 AATAGGCTAACTGAAGCATACAAC 57.073 37.500 0.00 0.00 41.11 3.32
2010 2382 9.056005 CAATAATAGGCTAACTGAAGCATACAA 57.944 33.333 0.00 0.43 41.11 2.41
2011 2383 8.210946 ACAATAATAGGCTAACTGAAGCATACA 58.789 33.333 0.00 0.00 41.11 2.29
2012 2384 8.608844 ACAATAATAGGCTAACTGAAGCATAC 57.391 34.615 0.00 0.00 41.11 2.39
2013 2385 9.706691 GTACAATAATAGGCTAACTGAAGCATA 57.293 33.333 0.00 6.41 44.64 3.14
2014 2386 8.210946 TGTACAATAATAGGCTAACTGAAGCAT 58.789 33.333 0.00 4.63 44.64 3.79
2015 2387 7.494625 GTGTACAATAATAGGCTAACTGAAGCA 59.505 37.037 0.00 0.00 44.64 3.91
2016 2388 7.041984 GGTGTACAATAATAGGCTAACTGAAGC 60.042 40.741 0.00 0.00 41.99 3.86
2017 2389 7.985184 TGGTGTACAATAATAGGCTAACTGAAG 59.015 37.037 0.00 0.00 0.00 3.02
2018 2390 7.853299 TGGTGTACAATAATAGGCTAACTGAA 58.147 34.615 0.00 0.00 0.00 3.02
2027 2399 7.987458 ACAGAACTGATGGTGTACAATAATAGG 59.013 37.037 8.87 0.00 0.00 2.57
2028 2400 8.948631 ACAGAACTGATGGTGTACAATAATAG 57.051 34.615 8.87 0.00 0.00 1.73
2033 2405 5.046304 AGCTACAGAACTGATGGTGTACAAT 60.046 40.000 8.87 0.00 0.00 2.71
2039 2411 2.998670 CACAGCTACAGAACTGATGGTG 59.001 50.000 19.29 19.29 39.02 4.17
2040 2412 2.634940 ACACAGCTACAGAACTGATGGT 59.365 45.455 8.87 3.80 37.35 3.55
2068 2446 1.226802 CACGAGAGCCACCAGATCG 60.227 63.158 0.00 0.00 39.22 3.69
2071 2449 0.247460 CAATCACGAGAGCCACCAGA 59.753 55.000 0.00 0.00 0.00 3.86
2075 2453 0.247736 AGTCCAATCACGAGAGCCAC 59.752 55.000 0.00 0.00 0.00 5.01
2081 2459 3.589988 ACAAGCTTAGTCCAATCACGAG 58.410 45.455 0.00 0.00 0.00 4.18
2092 2470 8.686334 CCAATTGGTTATATGAACAAGCTTAGT 58.314 33.333 16.90 0.00 0.00 2.24
2111 2489 3.165071 AGAGCAAAACCCTACCAATTGG 58.835 45.455 23.31 23.31 42.17 3.16
2133 2511 1.887198 ACGGATCTTCGTCAACAGTCT 59.113 47.619 0.00 0.00 39.34 3.24
2134 2512 2.349297 ACGGATCTTCGTCAACAGTC 57.651 50.000 0.00 0.00 39.34 3.51
2135 2513 2.800544 CAAACGGATCTTCGTCAACAGT 59.199 45.455 0.00 0.00 43.07 3.55
2136 2514 3.057019 TCAAACGGATCTTCGTCAACAG 58.943 45.455 0.00 0.00 43.07 3.16
2137 2515 3.100658 TCAAACGGATCTTCGTCAACA 57.899 42.857 0.00 0.00 43.07 3.33
2138 2516 4.863131 ACTATCAAACGGATCTTCGTCAAC 59.137 41.667 0.00 0.00 43.07 3.18
2139 2517 4.862574 CACTATCAAACGGATCTTCGTCAA 59.137 41.667 0.00 0.00 43.07 3.18
2142 2530 3.119101 AGCACTATCAAACGGATCTTCGT 60.119 43.478 0.00 0.00 46.08 3.85
2144 2532 4.494855 GCAAGCACTATCAAACGGATCTTC 60.495 45.833 0.00 0.00 37.44 2.87
2155 2543 2.553602 CACAAACAGGCAAGCACTATCA 59.446 45.455 0.00 0.00 0.00 2.15
2158 2546 2.051334 ACACAAACAGGCAAGCACTA 57.949 45.000 0.00 0.00 0.00 2.74
2159 2547 1.185315 AACACAAACAGGCAAGCACT 58.815 45.000 0.00 0.00 0.00 4.40
2170 2558 9.801873 AAGCATAATATCCACATAAACACAAAC 57.198 29.630 0.00 0.00 0.00 2.93
2171 2559 9.800433 CAAGCATAATATCCACATAAACACAAA 57.200 29.630 0.00 0.00 0.00 2.83
2172 2560 8.965819 ACAAGCATAATATCCACATAAACACAA 58.034 29.630 0.00 0.00 0.00 3.33
2211 2599 0.946221 CCGACATAGAGCAATCCGCC 60.946 60.000 0.00 0.00 44.04 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.