Multiple sequence alignment - TraesCS6B01G329500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G329500 chr6B 100.000 2174 0 0 1 2174 578773873 578771700 0.000000e+00 4015
1 TraesCS6B01G329500 chr6B 84.615 416 37 9 1 413 719100079 719099688 2.620000e-104 388
2 TraesCS6B01G329500 chr6B 87.900 281 32 2 1 281 18590389 18590111 1.610000e-86 329
3 TraesCS6B01G329500 chr6B 89.899 198 17 3 198 394 18592630 18592825 3.580000e-63 252
4 TraesCS6B01G329500 chr6B 80.311 193 23 3 1 178 635002487 635002295 4.870000e-27 132
5 TraesCS6B01G329500 chr6D 83.013 1666 101 69 455 2034 387735055 387733486 0.000000e+00 1341
6 TraesCS6B01G329500 chr6D 88.312 154 16 2 1631 1782 387725199 387725046 1.330000e-42 183
7 TraesCS6B01G329500 chr6D 85.106 141 19 2 2034 2173 436242812 436242673 2.250000e-30 143
8 TraesCS6B01G329500 chr6D 81.295 139 25 1 2036 2173 134337978 134338116 6.340000e-21 111
9 TraesCS6B01G329500 chr6A 81.764 998 69 61 455 1430 532879081 532878175 0.000000e+00 730
10 TraesCS6B01G329500 chr6A 84.934 604 40 17 1464 2034 532878180 532877595 4.050000e-157 564
11 TraesCS6B01G329500 chr7D 94.713 435 23 0 1 435 561874693 561874259 0.000000e+00 676
12 TraesCS6B01G329500 chr7D 90.948 232 19 1 198 429 561876688 561876917 5.830000e-81 311
13 TraesCS6B01G329500 chr2D 88.209 441 44 7 1 436 22814868 22814431 8.890000e-144 520
14 TraesCS6B01G329500 chr2D 87.554 233 24 4 198 429 22816913 22817141 4.600000e-67 265
15 TraesCS6B01G329500 chr7B 88.222 433 49 2 1 432 665724635 665724204 1.150000e-142 516
16 TraesCS6B01G329500 chr7B 92.704 233 16 1 198 429 665726838 665727070 3.460000e-88 335
17 TraesCS6B01G329500 chr5D 81.648 267 45 4 177 440 3557964 3557699 3.630000e-53 219
18 TraesCS6B01G329500 chr3D 84.163 221 31 4 190 408 155091460 155091242 6.080000e-51 211
19 TraesCS6B01G329500 chr4B 88.489 139 14 2 2037 2174 616930734 616930597 1.330000e-37 167
20 TraesCS6B01G329500 chr2B 81.884 138 24 1 2038 2174 659029159 659029296 4.900000e-22 115
21 TraesCS6B01G329500 chr7A 80.612 98 17 2 2078 2174 198976628 198976724 8.320000e-10 75
22 TraesCS6B01G329500 chr4A 85.714 70 10 0 2103 2172 571300948 571300879 8.320000e-10 75


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G329500 chr6B 578771700 578773873 2173 True 4015 4015 100.000 1 2174 1 chr6B.!!$R2 2173
1 TraesCS6B01G329500 chr6D 387733486 387735055 1569 True 1341 1341 83.013 455 2034 1 chr6D.!!$R2 1579
2 TraesCS6B01G329500 chr6A 532877595 532879081 1486 True 647 730 83.349 455 2034 2 chr6A.!!$R1 1579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 300 0.035881 CGGGCCAGATCAGCATGTAT 59.964 55.0 4.39 0.0 37.4 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 2270 0.02811 GCATTCGAAATGAGTCGGGC 59.972 55.0 0.0 0.0 41.43 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.506217 GCGTCGGCGATGACAAGA 60.506 61.111 31.53 0.00 41.33 3.02
27 28 2.092291 GCGTCGGCGATGACAAGAA 61.092 57.895 31.53 0.00 41.33 2.52
28 29 1.623081 GCGTCGGCGATGACAAGAAA 61.623 55.000 31.53 0.00 41.33 2.52
29 30 0.366871 CGTCGGCGATGACAAGAAAG 59.633 55.000 24.11 0.00 41.33 2.62
30 31 0.721718 GTCGGCGATGACAAGAAAGG 59.278 55.000 14.79 0.00 38.75 3.11
31 32 0.606096 TCGGCGATGACAAGAAAGGA 59.394 50.000 4.99 0.00 0.00 3.36
32 33 1.002366 CGGCGATGACAAGAAAGGAG 58.998 55.000 0.00 0.00 0.00 3.69
33 34 1.373570 GGCGATGACAAGAAAGGAGG 58.626 55.000 0.00 0.00 0.00 4.30
34 35 1.066143 GGCGATGACAAGAAAGGAGGA 60.066 52.381 0.00 0.00 0.00 3.71
35 36 2.275318 GCGATGACAAGAAAGGAGGAG 58.725 52.381 0.00 0.00 0.00 3.69
36 37 2.093973 GCGATGACAAGAAAGGAGGAGA 60.094 50.000 0.00 0.00 0.00 3.71
37 38 3.516615 CGATGACAAGAAAGGAGGAGAC 58.483 50.000 0.00 0.00 0.00 3.36
38 39 3.677424 CGATGACAAGAAAGGAGGAGACC 60.677 52.174 0.00 0.00 0.00 3.85
39 40 1.618837 TGACAAGAAAGGAGGAGACCG 59.381 52.381 0.00 0.00 34.73 4.79
40 41 1.893801 GACAAGAAAGGAGGAGACCGA 59.106 52.381 0.00 0.00 34.73 4.69
41 42 1.896465 ACAAGAAAGGAGGAGACCGAG 59.104 52.381 0.00 0.00 34.73 4.63
42 43 2.171840 CAAGAAAGGAGGAGACCGAGA 58.828 52.381 0.00 0.00 34.73 4.04
43 44 2.137810 AGAAAGGAGGAGACCGAGAG 57.862 55.000 0.00 0.00 34.73 3.20
64 65 4.194720 GACGGCGAGCTCGGTGAT 62.195 66.667 35.10 5.99 40.23 3.06
65 66 4.498520 ACGGCGAGCTCGGTGATG 62.499 66.667 35.10 8.98 40.23 3.07
66 67 4.193334 CGGCGAGCTCGGTGATGA 62.193 66.667 35.10 0.00 40.23 2.92
67 68 2.279120 GGCGAGCTCGGTGATGAG 60.279 66.667 35.10 7.44 40.23 2.90
73 74 2.791927 CTCGGTGATGAGCGACGA 59.208 61.111 1.32 0.00 46.75 4.20
74 75 1.297967 CTCGGTGATGAGCGACGAG 60.298 63.158 1.32 0.00 46.75 4.18
75 76 1.743995 TCGGTGATGAGCGACGAGA 60.744 57.895 1.32 0.00 46.75 4.04
76 77 1.583967 CGGTGATGAGCGACGAGAC 60.584 63.158 0.00 0.00 46.19 3.36
77 78 1.583967 GGTGATGAGCGACGAGACG 60.584 63.158 0.00 0.00 0.00 4.18
85 86 2.573689 CGACGAGACGCGAAGGTC 60.574 66.667 15.93 13.30 44.57 3.85
86 87 2.573689 GACGAGACGCGAAGGTCG 60.574 66.667 15.93 17.12 44.57 4.79
87 88 3.996744 GACGAGACGCGAAGGTCGG 62.997 68.421 15.93 0.00 44.57 4.79
95 96 4.814294 CGAAGGTCGGCGGAAGGG 62.814 72.222 7.21 0.00 36.00 3.95
96 97 3.703127 GAAGGTCGGCGGAAGGGT 61.703 66.667 7.21 0.00 0.00 4.34
97 98 3.952628 GAAGGTCGGCGGAAGGGTG 62.953 68.421 7.21 0.00 0.00 4.61
100 101 4.011517 GTCGGCGGAAGGGTGGAA 62.012 66.667 7.21 0.00 0.00 3.53
101 102 4.011517 TCGGCGGAAGGGTGGAAC 62.012 66.667 7.21 0.00 0.00 3.62
102 103 4.323477 CGGCGGAAGGGTGGAACA 62.323 66.667 0.00 0.00 39.98 3.18
113 114 4.227197 TGGAACACCACCAACGTG 57.773 55.556 0.00 0.00 39.91 4.49
114 115 1.602771 TGGAACACCACCAACGTGA 59.397 52.632 0.00 0.00 43.14 4.35
115 116 0.181587 TGGAACACCACCAACGTGAT 59.818 50.000 0.00 0.00 43.14 3.06
116 117 0.591170 GGAACACCACCAACGTGATG 59.409 55.000 0.00 0.00 43.14 3.07
117 118 0.591170 GAACACCACCAACGTGATGG 59.409 55.000 4.68 4.68 37.90 3.51
118 119 1.452145 AACACCACCAACGTGATGGC 61.452 55.000 6.18 0.00 44.75 4.40
119 120 2.668212 ACCACCAACGTGATGGCG 60.668 61.111 6.18 0.00 44.75 5.69
120 121 2.358125 CCACCAACGTGATGGCGA 60.358 61.111 6.18 0.00 44.75 5.54
121 122 2.390599 CCACCAACGTGATGGCGAG 61.391 63.158 6.18 0.00 44.75 5.03
122 123 2.742372 ACCAACGTGATGGCGAGC 60.742 61.111 6.18 0.00 44.75 5.03
123 124 3.853330 CCAACGTGATGGCGAGCG 61.853 66.667 0.00 0.00 32.78 5.03
124 125 3.853330 CAACGTGATGGCGAGCGG 61.853 66.667 0.00 0.00 35.59 5.52
140 141 4.430423 GGCACGACGAAGCAAGCG 62.430 66.667 16.24 0.00 0.00 4.68
141 142 3.403057 GCACGACGAAGCAAGCGA 61.403 61.111 0.00 0.00 0.00 4.93
142 143 2.765785 CACGACGAAGCAAGCGAG 59.234 61.111 0.00 0.00 0.00 5.03
143 144 2.430921 ACGACGAAGCAAGCGAGG 60.431 61.111 0.00 0.00 0.00 4.63
144 145 3.843240 CGACGAAGCAAGCGAGGC 61.843 66.667 0.00 0.00 0.00 4.70
145 146 3.491652 GACGAAGCAAGCGAGGCC 61.492 66.667 0.00 0.00 0.00 5.19
146 147 4.314440 ACGAAGCAAGCGAGGCCA 62.314 61.111 5.01 0.00 0.00 5.36
147 148 3.049674 CGAAGCAAGCGAGGCCAA 61.050 61.111 5.01 0.00 0.00 4.52
148 149 2.563427 GAAGCAAGCGAGGCCAAC 59.437 61.111 5.01 0.00 0.00 3.77
149 150 3.314388 GAAGCAAGCGAGGCCAACG 62.314 63.158 16.13 16.13 0.00 4.10
179 180 4.208632 CCACTGGTTCGGCAGATC 57.791 61.111 0.00 0.00 0.00 2.75
180 181 1.599047 CCACTGGTTCGGCAGATCT 59.401 57.895 0.00 0.00 0.00 2.75
181 182 0.036010 CCACTGGTTCGGCAGATCTT 60.036 55.000 0.00 0.00 0.00 2.40
182 183 1.611673 CCACTGGTTCGGCAGATCTTT 60.612 52.381 0.00 0.00 0.00 2.52
183 184 2.154462 CACTGGTTCGGCAGATCTTTT 58.846 47.619 0.00 0.00 0.00 2.27
184 185 3.334691 CACTGGTTCGGCAGATCTTTTA 58.665 45.455 0.00 0.00 0.00 1.52
185 186 3.751175 CACTGGTTCGGCAGATCTTTTAA 59.249 43.478 0.00 0.00 0.00 1.52
186 187 4.396166 CACTGGTTCGGCAGATCTTTTAAT 59.604 41.667 0.00 0.00 0.00 1.40
187 188 5.584649 CACTGGTTCGGCAGATCTTTTAATA 59.415 40.000 0.00 0.00 0.00 0.98
188 189 6.093495 CACTGGTTCGGCAGATCTTTTAATAA 59.907 38.462 0.00 0.00 0.00 1.40
189 190 6.093633 ACTGGTTCGGCAGATCTTTTAATAAC 59.906 38.462 0.00 0.00 0.00 1.89
190 191 6.177610 TGGTTCGGCAGATCTTTTAATAACT 58.822 36.000 0.00 0.00 0.00 2.24
191 192 6.093495 TGGTTCGGCAGATCTTTTAATAACTG 59.907 38.462 0.00 0.00 0.00 3.16
192 193 6.458342 GGTTCGGCAGATCTTTTAATAACTGG 60.458 42.308 0.00 0.00 0.00 4.00
193 194 4.574828 TCGGCAGATCTTTTAATAACTGGC 59.425 41.667 0.00 0.00 43.80 4.85
194 195 4.335315 CGGCAGATCTTTTAATAACTGGCA 59.665 41.667 16.04 0.00 46.18 4.92
195 196 5.163663 CGGCAGATCTTTTAATAACTGGCAA 60.164 40.000 16.04 0.00 46.18 4.52
196 197 6.036470 GGCAGATCTTTTAATAACTGGCAAC 58.964 40.000 0.00 0.00 45.54 4.17
197 198 6.127619 GGCAGATCTTTTAATAACTGGCAACT 60.128 38.462 0.00 0.00 45.54 3.16
198 199 7.315890 GCAGATCTTTTAATAACTGGCAACTT 58.684 34.615 0.00 0.00 37.61 2.66
199 200 7.814587 GCAGATCTTTTAATAACTGGCAACTTT 59.185 33.333 0.00 0.00 37.61 2.66
200 201 9.132521 CAGATCTTTTAATAACTGGCAACTTTG 57.867 33.333 0.00 0.00 37.61 2.77
212 213 2.238942 CAACTTTGCAAAAGACCCCC 57.761 50.000 13.84 0.00 0.00 5.40
213 214 1.762370 CAACTTTGCAAAAGACCCCCT 59.238 47.619 13.84 0.00 0.00 4.79
214 215 1.413118 ACTTTGCAAAAGACCCCCTG 58.587 50.000 13.84 0.54 0.00 4.45
215 216 0.681175 CTTTGCAAAAGACCCCCTGG 59.319 55.000 13.84 0.00 37.80 4.45
224 225 3.882670 ACCCCCTGGTTCCCTCCA 61.883 66.667 0.00 0.00 44.75 3.86
225 226 2.287194 CCCCCTGGTTCCCTCCAT 60.287 66.667 0.00 0.00 36.84 3.41
226 227 1.005556 CCCCCTGGTTCCCTCCATA 59.994 63.158 0.00 0.00 36.84 2.74
227 228 0.403453 CCCCCTGGTTCCCTCCATAT 60.403 60.000 0.00 0.00 36.84 1.78
228 229 1.534338 CCCCTGGTTCCCTCCATATT 58.466 55.000 0.00 0.00 36.84 1.28
229 230 1.425448 CCCCTGGTTCCCTCCATATTC 59.575 57.143 0.00 0.00 36.84 1.75
230 231 1.072331 CCCTGGTTCCCTCCATATTCG 59.928 57.143 0.00 0.00 36.84 3.34
231 232 2.047061 CCTGGTTCCCTCCATATTCGA 58.953 52.381 0.00 0.00 36.84 3.71
232 233 2.037772 CCTGGTTCCCTCCATATTCGAG 59.962 54.545 0.00 0.00 36.84 4.04
233 234 1.416401 TGGTTCCCTCCATATTCGAGC 59.584 52.381 0.00 0.00 31.96 5.03
234 235 1.605712 GGTTCCCTCCATATTCGAGCG 60.606 57.143 0.00 0.00 0.00 5.03
235 236 0.679505 TTCCCTCCATATTCGAGCGG 59.320 55.000 0.00 0.00 0.00 5.52
236 237 1.374758 CCCTCCATATTCGAGCGGC 60.375 63.158 0.00 0.00 0.00 6.53
237 238 1.668294 CCTCCATATTCGAGCGGCT 59.332 57.895 0.00 0.00 0.00 5.52
238 239 0.668706 CCTCCATATTCGAGCGGCTG 60.669 60.000 7.50 0.00 0.00 4.85
239 240 0.315251 CTCCATATTCGAGCGGCTGA 59.685 55.000 7.50 2.28 0.00 4.26
240 241 0.315251 TCCATATTCGAGCGGCTGAG 59.685 55.000 7.50 0.72 0.00 3.35
241 242 0.315251 CCATATTCGAGCGGCTGAGA 59.685 55.000 7.50 3.63 0.00 3.27
242 243 1.413382 CATATTCGAGCGGCTGAGAC 58.587 55.000 7.50 0.00 0.00 3.36
243 244 0.039978 ATATTCGAGCGGCTGAGACG 60.040 55.000 7.50 1.77 36.98 4.18
244 245 1.093496 TATTCGAGCGGCTGAGACGA 61.093 55.000 14.07 7.40 35.20 4.20
245 246 1.729470 ATTCGAGCGGCTGAGACGAT 61.729 55.000 14.07 4.09 35.20 3.73
246 247 2.598619 TTCGAGCGGCTGAGACGATG 62.599 60.000 14.07 0.00 35.20 3.84
247 248 2.492090 GAGCGGCTGAGACGATGT 59.508 61.111 14.07 0.00 35.20 3.06
248 249 1.875813 GAGCGGCTGAGACGATGTG 60.876 63.158 14.07 0.00 35.20 3.21
249 250 2.181777 GCGGCTGAGACGATGTGA 59.818 61.111 14.07 0.00 35.20 3.58
250 251 2.161486 GCGGCTGAGACGATGTGAC 61.161 63.158 14.07 0.00 35.20 3.67
251 252 1.212751 CGGCTGAGACGATGTGACA 59.787 57.895 0.00 0.00 35.20 3.58
252 253 0.799917 CGGCTGAGACGATGTGACAG 60.800 60.000 0.00 0.00 35.20 3.51
253 254 0.244994 GGCTGAGACGATGTGACAGT 59.755 55.000 0.00 0.00 0.00 3.55
254 255 1.623359 GCTGAGACGATGTGACAGTC 58.377 55.000 0.00 0.00 35.30 3.51
255 256 1.068264 GCTGAGACGATGTGACAGTCA 60.068 52.381 0.00 0.00 37.36 3.41
256 257 2.608016 GCTGAGACGATGTGACAGTCAA 60.608 50.000 4.32 0.00 37.36 3.18
257 258 3.642705 CTGAGACGATGTGACAGTCAAA 58.357 45.455 4.32 0.00 37.36 2.69
258 259 3.642705 TGAGACGATGTGACAGTCAAAG 58.357 45.455 4.32 0.00 37.36 2.77
259 260 2.408050 AGACGATGTGACAGTCAAAGC 58.592 47.619 4.32 0.97 37.36 3.51
260 261 2.135139 GACGATGTGACAGTCAAAGCA 58.865 47.619 9.67 2.46 35.19 3.91
261 262 1.867233 ACGATGTGACAGTCAAAGCAC 59.133 47.619 9.67 0.00 0.00 4.40
262 263 1.866601 CGATGTGACAGTCAAAGCACA 59.133 47.619 9.67 2.32 44.31 4.57
263 264 2.348872 CGATGTGACAGTCAAAGCACAC 60.349 50.000 9.67 0.00 43.17 3.82
264 265 2.401583 TGTGACAGTCAAAGCACACT 57.598 45.000 4.32 0.00 36.44 3.55
265 266 2.710377 TGTGACAGTCAAAGCACACTT 58.290 42.857 4.32 0.00 36.44 3.16
266 267 2.419673 TGTGACAGTCAAAGCACACTTG 59.580 45.455 4.32 0.00 36.44 3.16
267 268 2.016318 TGACAGTCAAAGCACACTTGG 58.984 47.619 0.00 0.00 35.85 3.61
268 269 0.740737 ACAGTCAAAGCACACTTGGC 59.259 50.000 0.00 0.00 35.85 4.52
269 270 0.740149 CAGTCAAAGCACACTTGGCA 59.260 50.000 0.00 0.00 35.85 4.92
270 271 1.027357 AGTCAAAGCACACTTGGCAG 58.973 50.000 0.00 0.00 35.85 4.85
271 272 0.595825 GTCAAAGCACACTTGGCAGC 60.596 55.000 0.00 0.00 35.85 5.25
272 273 1.659335 CAAAGCACACTTGGCAGCG 60.659 57.895 0.00 0.00 35.85 5.18
273 274 2.848858 AAAGCACACTTGGCAGCGG 61.849 57.895 0.00 0.00 35.85 5.52
274 275 4.569180 AGCACACTTGGCAGCGGT 62.569 61.111 0.00 0.00 0.00 5.68
275 276 3.595758 GCACACTTGGCAGCGGTT 61.596 61.111 0.00 0.00 0.00 4.44
276 277 2.332514 CACACTTGGCAGCGGTTG 59.667 61.111 0.00 0.00 0.00 3.77
277 278 2.186160 CACACTTGGCAGCGGTTGA 61.186 57.895 0.00 0.00 0.00 3.18
278 279 2.186826 ACACTTGGCAGCGGTTGAC 61.187 57.895 0.00 0.00 34.37 3.18
279 280 1.893808 CACTTGGCAGCGGTTGACT 60.894 57.895 0.00 0.00 35.09 3.41
280 281 1.598130 ACTTGGCAGCGGTTGACTC 60.598 57.895 0.00 0.00 35.09 3.36
281 282 2.664851 TTGGCAGCGGTTGACTCG 60.665 61.111 0.00 0.00 35.09 4.18
282 283 4.680237 TGGCAGCGGTTGACTCGG 62.680 66.667 0.00 0.00 35.09 4.63
288 289 3.691342 CGGTTGACTCGGGCCAGA 61.691 66.667 4.39 4.83 0.00 3.86
289 290 2.990479 GGTTGACTCGGGCCAGAT 59.010 61.111 5.89 0.00 0.00 2.90
290 291 1.153349 GGTTGACTCGGGCCAGATC 60.153 63.158 5.89 7.16 0.00 2.75
291 292 1.596934 GTTGACTCGGGCCAGATCA 59.403 57.895 5.89 9.68 0.00 2.92
292 293 0.460987 GTTGACTCGGGCCAGATCAG 60.461 60.000 5.89 0.00 0.00 2.90
293 294 2.107953 GACTCGGGCCAGATCAGC 59.892 66.667 5.89 0.00 0.00 4.26
294 295 2.685017 ACTCGGGCCAGATCAGCA 60.685 61.111 5.89 0.00 0.00 4.41
295 296 2.037620 GACTCGGGCCAGATCAGCAT 62.038 60.000 5.89 0.00 0.00 3.79
296 297 1.597302 CTCGGGCCAGATCAGCATG 60.597 63.158 5.89 0.00 37.54 4.06
297 298 2.191375 CGGGCCAGATCAGCATGT 59.809 61.111 4.39 0.00 37.40 3.21
298 299 1.048160 TCGGGCCAGATCAGCATGTA 61.048 55.000 4.39 0.00 37.40 2.29
299 300 0.035881 CGGGCCAGATCAGCATGTAT 59.964 55.000 4.39 0.00 37.40 2.29
300 301 1.531423 GGGCCAGATCAGCATGTATG 58.469 55.000 4.39 0.00 37.40 2.39
301 302 1.202855 GGGCCAGATCAGCATGTATGT 60.203 52.381 4.39 0.00 37.40 2.29
302 303 2.038952 GGGCCAGATCAGCATGTATGTA 59.961 50.000 4.39 0.00 37.40 2.29
303 304 3.332919 GGCCAGATCAGCATGTATGTAG 58.667 50.000 0.00 0.00 37.40 2.74
304 305 3.007290 GGCCAGATCAGCATGTATGTAGA 59.993 47.826 0.00 0.00 37.40 2.59
305 306 3.993081 GCCAGATCAGCATGTATGTAGAC 59.007 47.826 0.00 0.00 37.40 2.59
306 307 4.564041 CCAGATCAGCATGTATGTAGACC 58.436 47.826 0.00 0.00 37.40 3.85
307 308 4.039609 CCAGATCAGCATGTATGTAGACCA 59.960 45.833 0.00 0.00 37.40 4.02
308 309 5.453762 CCAGATCAGCATGTATGTAGACCAA 60.454 44.000 0.00 0.00 37.40 3.67
309 310 6.051074 CAGATCAGCATGTATGTAGACCAAA 58.949 40.000 0.00 0.00 37.40 3.28
310 311 6.018425 CAGATCAGCATGTATGTAGACCAAAC 60.018 42.308 0.00 0.00 37.40 2.93
311 312 4.513442 TCAGCATGTATGTAGACCAAACC 58.487 43.478 0.00 0.00 37.40 3.27
312 313 3.309682 CAGCATGTATGTAGACCAAACCG 59.690 47.826 0.00 0.00 0.00 4.44
313 314 3.055385 AGCATGTATGTAGACCAAACCGT 60.055 43.478 0.00 0.00 0.00 4.83
314 315 4.160814 AGCATGTATGTAGACCAAACCGTA 59.839 41.667 0.00 0.00 0.00 4.02
315 316 5.054477 GCATGTATGTAGACCAAACCGTAT 58.946 41.667 0.00 0.00 0.00 3.06
316 317 6.041182 AGCATGTATGTAGACCAAACCGTATA 59.959 38.462 0.00 0.00 0.00 1.47
317 318 6.702723 GCATGTATGTAGACCAAACCGTATAA 59.297 38.462 0.00 0.00 0.00 0.98
318 319 7.386848 GCATGTATGTAGACCAAACCGTATAAT 59.613 37.037 0.00 0.00 0.00 1.28
319 320 8.708742 CATGTATGTAGACCAAACCGTATAATG 58.291 37.037 0.00 0.00 0.00 1.90
320 321 7.211573 TGTATGTAGACCAAACCGTATAATGG 58.788 38.462 0.00 0.00 38.91 3.16
321 322 5.936187 TGTAGACCAAACCGTATAATGGA 57.064 39.130 0.00 0.00 36.75 3.41
322 323 6.488769 TGTAGACCAAACCGTATAATGGAT 57.511 37.500 0.00 0.00 36.75 3.41
323 324 6.518493 TGTAGACCAAACCGTATAATGGATC 58.482 40.000 0.00 0.00 36.75 3.36
324 325 4.628074 AGACCAAACCGTATAATGGATCG 58.372 43.478 0.00 0.00 36.75 3.69
325 326 4.100498 AGACCAAACCGTATAATGGATCGT 59.900 41.667 0.00 0.00 36.75 3.73
326 327 5.302568 AGACCAAACCGTATAATGGATCGTA 59.697 40.000 0.00 0.00 36.75 3.43
327 328 5.535333 ACCAAACCGTATAATGGATCGTAG 58.465 41.667 0.00 0.00 36.75 3.51
328 329 5.302568 ACCAAACCGTATAATGGATCGTAGA 59.697 40.000 0.00 0.00 37.38 2.59
329 330 6.014840 ACCAAACCGTATAATGGATCGTAGAT 60.015 38.462 0.00 0.00 37.62 1.98
330 331 6.310467 CCAAACCGTATAATGGATCGTAGATG 59.690 42.308 0.00 0.00 45.12 2.90
331 332 6.829229 AACCGTATAATGGATCGTAGATGA 57.171 37.500 0.00 0.00 45.12 2.92
332 333 6.192234 ACCGTATAATGGATCGTAGATGAC 57.808 41.667 0.00 0.00 45.12 3.06
333 334 5.125097 ACCGTATAATGGATCGTAGATGACC 59.875 44.000 0.00 0.00 45.12 4.02
334 335 5.357314 CCGTATAATGGATCGTAGATGACCT 59.643 44.000 0.00 0.00 45.12 3.85
335 336 6.458478 CCGTATAATGGATCGTAGATGACCTC 60.458 46.154 0.00 0.00 45.12 3.85
336 337 6.316640 CGTATAATGGATCGTAGATGACCTCT 59.683 42.308 0.00 0.00 45.12 3.69
337 338 7.494952 CGTATAATGGATCGTAGATGACCTCTA 59.505 40.741 0.00 0.00 45.12 2.43
338 339 7.873719 ATAATGGATCGTAGATGACCTCTAG 57.126 40.000 0.00 0.00 45.12 2.43
339 340 4.976540 TGGATCGTAGATGACCTCTAGA 57.023 45.455 0.00 0.00 45.12 2.43
340 341 5.306114 TGGATCGTAGATGACCTCTAGAA 57.694 43.478 0.00 0.00 45.12 2.10
341 342 5.064558 TGGATCGTAGATGACCTCTAGAAC 58.935 45.833 0.00 0.00 45.12 3.01
342 343 5.064558 GGATCGTAGATGACCTCTAGAACA 58.935 45.833 0.00 0.00 45.12 3.18
343 344 5.531659 GGATCGTAGATGACCTCTAGAACAA 59.468 44.000 0.00 0.00 45.12 2.83
344 345 6.293735 GGATCGTAGATGACCTCTAGAACAAG 60.294 46.154 0.00 0.00 45.12 3.16
345 346 5.498393 TCGTAGATGACCTCTAGAACAAGT 58.502 41.667 0.00 0.00 37.14 3.16
346 347 5.944599 TCGTAGATGACCTCTAGAACAAGTT 59.055 40.000 0.00 0.00 37.14 2.66
347 348 6.433404 TCGTAGATGACCTCTAGAACAAGTTT 59.567 38.462 0.00 0.00 37.14 2.66
348 349 6.528423 CGTAGATGACCTCTAGAACAAGTTTG 59.472 42.308 0.00 0.00 37.14 2.93
349 350 6.672266 AGATGACCTCTAGAACAAGTTTGA 57.328 37.500 0.00 0.00 30.26 2.69
350 351 7.251321 AGATGACCTCTAGAACAAGTTTGAT 57.749 36.000 0.00 0.00 30.26 2.57
351 352 7.102346 AGATGACCTCTAGAACAAGTTTGATG 58.898 38.462 0.00 0.00 30.26 3.07
352 353 6.419484 TGACCTCTAGAACAAGTTTGATGA 57.581 37.500 0.00 0.00 0.00 2.92
353 354 6.223852 TGACCTCTAGAACAAGTTTGATGAC 58.776 40.000 0.00 0.00 0.00 3.06
354 355 6.042093 TGACCTCTAGAACAAGTTTGATGACT 59.958 38.462 0.00 0.00 0.00 3.41
355 356 6.226787 ACCTCTAGAACAAGTTTGATGACTG 58.773 40.000 0.00 0.00 0.00 3.51
356 357 6.183361 ACCTCTAGAACAAGTTTGATGACTGT 60.183 38.462 0.00 0.00 0.00 3.55
357 358 7.015292 ACCTCTAGAACAAGTTTGATGACTGTA 59.985 37.037 0.00 0.00 0.00 2.74
358 359 8.037758 CCTCTAGAACAAGTTTGATGACTGTAT 58.962 37.037 0.00 0.00 0.00 2.29
359 360 9.429359 CTCTAGAACAAGTTTGATGACTGTATT 57.571 33.333 0.00 0.00 0.00 1.89
360 361 9.208022 TCTAGAACAAGTTTGATGACTGTATTG 57.792 33.333 0.00 0.00 0.00 1.90
361 362 6.672147 AGAACAAGTTTGATGACTGTATTGC 58.328 36.000 0.00 0.00 0.00 3.56
362 363 5.034554 ACAAGTTTGATGACTGTATTGCG 57.965 39.130 0.00 0.00 0.00 4.85
363 364 4.083324 ACAAGTTTGATGACTGTATTGCGG 60.083 41.667 0.00 0.00 0.00 5.69
364 365 3.009723 AGTTTGATGACTGTATTGCGGG 58.990 45.455 0.00 0.00 0.00 6.13
365 366 2.747446 GTTTGATGACTGTATTGCGGGT 59.253 45.455 0.00 0.00 0.00 5.28
366 367 3.897141 TTGATGACTGTATTGCGGGTA 57.103 42.857 0.00 0.00 0.00 3.69
367 368 4.415881 TTGATGACTGTATTGCGGGTAT 57.584 40.909 0.00 0.00 0.00 2.73
368 369 4.415881 TGATGACTGTATTGCGGGTATT 57.584 40.909 0.00 0.00 0.00 1.89
369 370 4.776349 TGATGACTGTATTGCGGGTATTT 58.224 39.130 0.00 0.00 0.00 1.40
370 371 4.574421 TGATGACTGTATTGCGGGTATTTG 59.426 41.667 0.00 0.00 0.00 2.32
371 372 3.945346 TGACTGTATTGCGGGTATTTGT 58.055 40.909 0.00 0.00 0.00 2.83
372 373 5.087391 TGACTGTATTGCGGGTATTTGTA 57.913 39.130 0.00 0.00 0.00 2.41
373 374 5.489249 TGACTGTATTGCGGGTATTTGTAA 58.511 37.500 0.00 0.00 0.00 2.41
374 375 5.352016 TGACTGTATTGCGGGTATTTGTAAC 59.648 40.000 0.00 0.00 0.00 2.50
375 376 5.247084 ACTGTATTGCGGGTATTTGTAACA 58.753 37.500 0.00 0.00 0.00 2.41
376 377 5.706369 ACTGTATTGCGGGTATTTGTAACAA 59.294 36.000 0.00 0.00 0.00 2.83
377 378 5.940595 TGTATTGCGGGTATTTGTAACAAC 58.059 37.500 0.00 0.00 0.00 3.32
378 379 5.472478 TGTATTGCGGGTATTTGTAACAACA 59.528 36.000 0.00 0.00 0.00 3.33
379 380 4.491234 TTGCGGGTATTTGTAACAACAG 57.509 40.909 0.00 0.00 0.00 3.16
380 381 2.814919 TGCGGGTATTTGTAACAACAGG 59.185 45.455 0.00 0.00 0.00 4.00
381 382 2.162809 GCGGGTATTTGTAACAACAGGG 59.837 50.000 0.00 0.00 0.00 4.45
382 383 3.677190 CGGGTATTTGTAACAACAGGGA 58.323 45.455 0.00 0.00 0.00 4.20
383 384 3.437741 CGGGTATTTGTAACAACAGGGAC 59.562 47.826 0.00 0.00 0.00 4.46
384 385 4.659115 GGGTATTTGTAACAACAGGGACT 58.341 43.478 0.00 0.00 43.88 3.85
385 386 5.569227 CGGGTATTTGTAACAACAGGGACTA 60.569 44.000 0.00 0.00 36.02 2.59
386 387 6.240145 GGGTATTTGTAACAACAGGGACTAA 58.760 40.000 0.00 0.00 36.02 2.24
387 388 6.716173 GGGTATTTGTAACAACAGGGACTAAA 59.284 38.462 0.00 0.00 36.02 1.85
388 389 7.094506 GGGTATTTGTAACAACAGGGACTAAAG 60.095 40.741 0.00 0.00 36.02 1.85
389 390 5.761165 TTTGTAACAACAGGGACTAAAGC 57.239 39.130 0.00 0.00 36.02 3.51
390 391 4.699925 TGTAACAACAGGGACTAAAGCT 57.300 40.909 0.00 0.00 36.02 3.74
391 392 5.811796 TGTAACAACAGGGACTAAAGCTA 57.188 39.130 0.00 0.00 36.02 3.32
392 393 6.177310 TGTAACAACAGGGACTAAAGCTAA 57.823 37.500 0.00 0.00 36.02 3.09
393 394 5.993441 TGTAACAACAGGGACTAAAGCTAAC 59.007 40.000 0.00 0.00 36.02 2.34
394 395 3.660865 ACAACAGGGACTAAAGCTAACG 58.339 45.455 0.00 0.00 36.02 3.18
395 396 2.381725 ACAGGGACTAAAGCTAACGC 57.618 50.000 0.00 0.00 36.02 4.84
396 397 1.066358 ACAGGGACTAAAGCTAACGCC 60.066 52.381 0.00 0.00 36.02 5.68
397 398 1.066430 CAGGGACTAAAGCTAACGCCA 60.066 52.381 0.00 0.00 36.02 5.69
398 399 1.626825 AGGGACTAAAGCTAACGCCAA 59.373 47.619 0.00 0.00 36.02 4.52
399 400 2.238898 AGGGACTAAAGCTAACGCCAAT 59.761 45.455 0.00 0.00 36.02 3.16
400 401 3.453353 AGGGACTAAAGCTAACGCCAATA 59.547 43.478 0.00 0.00 36.02 1.90
401 402 3.558829 GGGACTAAAGCTAACGCCAATAC 59.441 47.826 0.00 0.00 36.60 1.89
402 403 4.186159 GGACTAAAGCTAACGCCAATACA 58.814 43.478 0.00 0.00 36.60 2.29
403 404 4.632688 GGACTAAAGCTAACGCCAATACAA 59.367 41.667 0.00 0.00 36.60 2.41
404 405 5.220605 GGACTAAAGCTAACGCCAATACAAG 60.221 44.000 0.00 0.00 36.60 3.16
405 406 5.243207 ACTAAAGCTAACGCCAATACAAGT 58.757 37.500 0.00 0.00 36.60 3.16
406 407 6.400568 ACTAAAGCTAACGCCAATACAAGTA 58.599 36.000 0.00 0.00 36.60 2.24
407 408 6.875195 ACTAAAGCTAACGCCAATACAAGTAA 59.125 34.615 0.00 0.00 36.60 2.24
408 409 6.563222 AAAGCTAACGCCAATACAAGTAAA 57.437 33.333 0.00 0.00 36.60 2.01
409 410 6.753107 AAGCTAACGCCAATACAAGTAAAT 57.247 33.333 0.00 0.00 36.60 1.40
410 411 6.119144 AGCTAACGCCAATACAAGTAAATG 57.881 37.500 0.00 0.00 36.60 2.32
411 412 5.065988 AGCTAACGCCAATACAAGTAAATGG 59.934 40.000 9.73 9.73 36.60 3.16
412 413 5.065474 GCTAACGCCAATACAAGTAAATGGA 59.935 40.000 15.52 0.00 31.53 3.41
413 414 4.957759 ACGCCAATACAAGTAAATGGAC 57.042 40.909 15.52 8.54 31.53 4.02
414 415 3.692593 ACGCCAATACAAGTAAATGGACC 59.307 43.478 15.52 0.00 31.53 4.46
415 416 3.945285 CGCCAATACAAGTAAATGGACCT 59.055 43.478 15.52 0.00 31.53 3.85
416 417 4.201910 CGCCAATACAAGTAAATGGACCTG 60.202 45.833 15.52 3.16 31.53 4.00
417 418 4.705023 GCCAATACAAGTAAATGGACCTGT 59.295 41.667 15.52 0.00 31.53 4.00
418 419 5.883673 GCCAATACAAGTAAATGGACCTGTA 59.116 40.000 15.52 0.00 32.28 2.74
419 420 6.038271 GCCAATACAAGTAAATGGACCTGTAG 59.962 42.308 15.52 0.00 31.48 2.74
420 421 7.110155 CCAATACAAGTAAATGGACCTGTAGT 58.890 38.462 8.83 0.00 31.48 2.73
421 422 7.065803 CCAATACAAGTAAATGGACCTGTAGTG 59.934 40.741 8.83 7.78 39.94 2.74
422 423 5.818678 ACAAGTAAATGGACCTGTAGTGA 57.181 39.130 0.00 0.00 0.00 3.41
423 424 6.182507 ACAAGTAAATGGACCTGTAGTGAA 57.817 37.500 0.00 0.00 0.00 3.18
424 425 6.779860 ACAAGTAAATGGACCTGTAGTGAAT 58.220 36.000 0.00 0.00 0.00 2.57
425 426 7.231467 ACAAGTAAATGGACCTGTAGTGAATT 58.769 34.615 0.00 0.00 0.00 2.17
426 427 7.724061 ACAAGTAAATGGACCTGTAGTGAATTT 59.276 33.333 0.00 0.00 0.00 1.82
427 428 8.576442 CAAGTAAATGGACCTGTAGTGAATTTT 58.424 33.333 0.00 0.00 0.00 1.82
428 429 8.706322 AGTAAATGGACCTGTAGTGAATTTTT 57.294 30.769 0.00 0.00 0.00 1.94
450 451 7.971183 TTTTTCTTTTTGGATTTTATCGGGG 57.029 32.000 0.00 0.00 0.00 5.73
451 452 6.673839 TTTCTTTTTGGATTTTATCGGGGT 57.326 33.333 0.00 0.00 0.00 4.95
452 453 5.907866 TCTTTTTGGATTTTATCGGGGTC 57.092 39.130 0.00 0.00 0.00 4.46
453 454 4.707934 TCTTTTTGGATTTTATCGGGGTCC 59.292 41.667 0.00 0.00 0.00 4.46
557 562 4.437682 TGATCCACTCAACTCAAACCTT 57.562 40.909 0.00 0.00 0.00 3.50
559 564 4.103153 TGATCCACTCAACTCAAACCTTCT 59.897 41.667 0.00 0.00 0.00 2.85
560 565 4.503714 TCCACTCAACTCAAACCTTCTT 57.496 40.909 0.00 0.00 0.00 2.52
562 567 4.080582 TCCACTCAACTCAAACCTTCTTCA 60.081 41.667 0.00 0.00 0.00 3.02
563 568 4.640201 CCACTCAACTCAAACCTTCTTCAA 59.360 41.667 0.00 0.00 0.00 2.69
619 624 4.007644 CGTCAGTGCCAGCTCCCA 62.008 66.667 0.00 0.00 0.00 4.37
634 641 2.677875 CCAAGCCAAGCCAGGACC 60.678 66.667 0.00 0.00 0.00 4.46
664 671 4.081030 GATGCCGATGCCGATGCG 62.081 66.667 0.00 0.00 41.78 4.73
665 672 4.916293 ATGCCGATGCCGATGCGT 62.916 61.111 0.00 0.00 41.78 5.24
676 683 4.593864 GATGCGTCGCCCCCTCTC 62.594 72.222 15.88 0.00 0.00 3.20
696 703 3.644606 CTGCCTGCCCACCTGTCT 61.645 66.667 0.00 0.00 0.00 3.41
698 705 2.249413 CTGCCTGCCCACCTGTCTAG 62.249 65.000 0.00 0.00 0.00 2.43
716 723 3.311110 GGATCCCGATGCGGCCTA 61.311 66.667 0.00 0.00 46.86 3.93
761 775 1.669115 CCTCACACGCCCAGAACAG 60.669 63.158 0.00 0.00 0.00 3.16
762 776 2.280797 TCACACGCCCAGAACAGC 60.281 61.111 0.00 0.00 0.00 4.40
764 778 2.591715 ACACGCCCAGAACAGCAC 60.592 61.111 0.00 0.00 0.00 4.40
803 827 1.673337 GCCCCCGCCGGTATAAATC 60.673 63.158 1.90 0.00 0.00 2.17
872 902 4.598894 CAGCCATCCCCGAGCTCG 62.599 72.222 29.06 29.06 33.70 5.03
890 922 2.738521 CTCCCAACACCGCACGAG 60.739 66.667 0.00 0.00 0.00 4.18
926 958 0.606401 CCATTCGAGCCACCAAGTGT 60.606 55.000 0.00 0.00 0.00 3.55
928 960 0.396435 ATTCGAGCCACCAAGTGTCA 59.604 50.000 0.00 0.00 0.00 3.58
937 969 0.036875 ACCAAGTGTCAGCTAAGCCC 59.963 55.000 0.00 0.00 0.00 5.19
966 998 3.906649 CTGTGCTGCGATCGCGAC 61.907 66.667 32.64 27.03 45.51 5.19
1021 1053 4.880537 CGATCGCCGGCTGCTTCT 62.881 66.667 26.68 1.57 38.05 2.85
1022 1054 3.267860 GATCGCCGGCTGCTTCTG 61.268 66.667 26.68 6.92 38.05 3.02
1026 1058 3.808656 GCCGGCTGCTTCTGCTTC 61.809 66.667 22.15 0.00 40.48 3.86
1221 1259 3.777925 CGTCCTTGTTCGGCAGCG 61.778 66.667 0.00 0.00 0.00 5.18
1222 1260 4.090057 GTCCTTGTTCGGCAGCGC 62.090 66.667 0.00 0.00 0.00 5.92
1281 1327 2.978824 CCGGAGTCGACCAACCAT 59.021 61.111 13.01 0.00 39.00 3.55
1297 1343 5.718130 ACCAACCATTGTAGTAGTAGTAGCA 59.282 40.000 0.00 0.00 0.00 3.49
1298 1344 6.127423 ACCAACCATTGTAGTAGTAGTAGCAG 60.127 42.308 0.00 0.00 0.00 4.24
1299 1345 5.517322 ACCATTGTAGTAGTAGTAGCAGC 57.483 43.478 0.00 0.00 0.00 5.25
1361 1415 0.105964 TCCACAGGGTCTTGACGTTG 59.894 55.000 0.00 0.00 34.93 4.10
1399 1455 3.998099 AAGTGCAGCCTTTTCTTCTTC 57.002 42.857 0.00 0.00 0.00 2.87
1423 1479 3.731652 TTGTTTGCCTCAAATGTCTGG 57.268 42.857 0.00 0.00 35.74 3.86
1429 1485 3.295093 TGCCTCAAATGTCTGGTTTGAA 58.705 40.909 3.32 0.00 42.91 2.69
1430 1486 3.703556 TGCCTCAAATGTCTGGTTTGAAA 59.296 39.130 3.32 0.00 42.91 2.69
1431 1487 4.344679 TGCCTCAAATGTCTGGTTTGAAAT 59.655 37.500 3.32 0.00 42.91 2.17
1432 1488 5.163322 TGCCTCAAATGTCTGGTTTGAAATT 60.163 36.000 3.32 0.00 42.91 1.82
1433 1489 5.759763 GCCTCAAATGTCTGGTTTGAAATTT 59.240 36.000 0.00 0.00 42.91 1.82
1434 1490 6.293027 GCCTCAAATGTCTGGTTTGAAATTTG 60.293 38.462 11.72 11.72 45.79 2.32
1440 1496 9.492973 AAATGTCTGGTTTGAAATTTGAATAGG 57.507 29.630 0.00 0.00 33.87 2.57
1441 1497 6.454795 TGTCTGGTTTGAAATTTGAATAGGC 58.545 36.000 0.00 0.00 0.00 3.93
1442 1498 6.041409 TGTCTGGTTTGAAATTTGAATAGGCA 59.959 34.615 0.00 0.00 0.00 4.75
1443 1499 6.366061 GTCTGGTTTGAAATTTGAATAGGCAC 59.634 38.462 0.00 0.00 0.00 5.01
1444 1500 6.041409 TCTGGTTTGAAATTTGAATAGGCACA 59.959 34.615 0.00 0.00 0.00 4.57
1450 1506 6.465948 TGAAATTTGAATAGGCACATTGCTT 58.534 32.000 0.00 0.00 44.28 3.91
1484 1558 5.047448 TGCTTTGAATTATTGCTACCTTGCA 60.047 36.000 0.00 0.00 41.65 4.08
1521 1595 6.024552 TGTGAATTAATTCCTGAAAGCCAC 57.975 37.500 22.42 12.89 35.97 5.01
1589 1667 6.882656 TGGATTACTTCATGAGAGAAGAAGG 58.117 40.000 10.37 0.00 46.18 3.46
1595 1673 2.165234 TCATGAGAGAAGAAGGCACGAG 59.835 50.000 0.00 0.00 0.00 4.18
1601 1679 3.513515 AGAGAAGAAGGCACGAGAGATTT 59.486 43.478 0.00 0.00 0.00 2.17
1605 1683 5.186021 AGAAGAAGGCACGAGAGATTTAAGA 59.814 40.000 0.00 0.00 0.00 2.10
1606 1684 5.407407 AGAAGGCACGAGAGATTTAAGAA 57.593 39.130 0.00 0.00 0.00 2.52
1607 1685 5.172205 AGAAGGCACGAGAGATTTAAGAAC 58.828 41.667 0.00 0.00 0.00 3.01
1608 1686 4.537135 AGGCACGAGAGATTTAAGAACA 57.463 40.909 0.00 0.00 0.00 3.18
1609 1687 4.246458 AGGCACGAGAGATTTAAGAACAC 58.754 43.478 0.00 0.00 0.00 3.32
1610 1688 3.371285 GGCACGAGAGATTTAAGAACACC 59.629 47.826 0.00 0.00 0.00 4.16
1611 1689 3.994392 GCACGAGAGATTTAAGAACACCA 59.006 43.478 0.00 0.00 0.00 4.17
1612 1690 4.451096 GCACGAGAGATTTAAGAACACCAA 59.549 41.667 0.00 0.00 0.00 3.67
1613 1691 5.122396 GCACGAGAGATTTAAGAACACCAAT 59.878 40.000 0.00 0.00 0.00 3.16
1674 1752 0.539438 AGCGGAGGGAATTGTTTGCA 60.539 50.000 0.00 0.00 0.00 4.08
1708 1791 0.096281 GTCTCTCTCGACGCAGACAG 59.904 60.000 7.66 3.52 36.15 3.51
1831 1929 2.021068 ATCTGTGATCGTCCTGGCCG 62.021 60.000 0.00 0.00 0.00 6.13
1895 1993 0.313043 TCTTGTCCCGTCGTCTCAAC 59.687 55.000 0.00 0.00 0.00 3.18
1909 2020 4.449068 TCGTCTCAACAATCTTTGCTTCTC 59.551 41.667 0.00 0.00 0.00 2.87
1931 2042 0.798776 GTCTGAACATTGACCAGGCG 59.201 55.000 9.10 0.00 0.00 5.52
1959 2075 1.154197 GCTAACTCGGTTGGTTCCAC 58.846 55.000 0.00 0.00 0.00 4.02
1991 2109 7.255035 CCTCATCGTACTACTCGAATAAAAGGA 60.255 40.741 0.00 0.00 40.61 3.36
1992 2110 7.637229 TCATCGTACTACTCGAATAAAAGGAG 58.363 38.462 0.00 0.00 40.61 3.69
2020 2141 4.502962 TCTTTTCCAAACCAAAGCACAAG 58.497 39.130 0.00 0.00 31.15 3.16
2027 2148 0.178990 ACCAAAGCACAAGGACCTCC 60.179 55.000 0.00 0.00 0.00 4.30
2034 2155 1.952367 GCACAAGGACCTCCCAATGAG 60.952 57.143 0.00 0.00 41.07 2.90
2042 2163 3.181526 CTCCCAATGAGGCCAACTC 57.818 57.895 5.01 0.00 46.78 3.01
2043 2164 0.394899 CTCCCAATGAGGCCAACTCC 60.395 60.000 5.01 0.00 46.01 3.85
2044 2165 1.139498 TCCCAATGAGGCCAACTCCA 61.139 55.000 5.01 0.00 46.01 3.86
2045 2166 0.682209 CCCAATGAGGCCAACTCCAG 60.682 60.000 5.01 0.00 46.01 3.86
2046 2167 1.318158 CCAATGAGGCCAACTCCAGC 61.318 60.000 5.01 0.00 46.01 4.85
2047 2168 1.377725 AATGAGGCCAACTCCAGCG 60.378 57.895 5.01 0.00 46.01 5.18
2048 2169 3.984193 ATGAGGCCAACTCCAGCGC 62.984 63.158 5.01 0.00 46.01 5.92
2085 2206 4.958897 CCCCGTCCGTTTGGGCAA 62.959 66.667 0.00 0.00 44.58 4.52
2086 2207 2.907917 CCCGTCCGTTTGGGCAAA 60.908 61.111 0.00 0.00 41.18 3.68
2087 2208 2.491022 CCCGTCCGTTTGGGCAAAA 61.491 57.895 0.00 0.00 41.18 2.44
2088 2209 1.299544 CCGTCCGTTTGGGCAAAAC 60.300 57.895 7.46 7.46 41.18 2.43
2097 2218 4.174411 GTTTGGGCAAAACAGATAGACC 57.826 45.455 12.62 0.00 46.30 3.85
2098 2219 2.507407 TGGGCAAAACAGATAGACCC 57.493 50.000 0.00 0.00 36.36 4.46
2099 2220 1.005450 TGGGCAAAACAGATAGACCCC 59.995 52.381 0.00 0.00 34.83 4.95
2100 2221 1.005450 GGGCAAAACAGATAGACCCCA 59.995 52.381 0.00 0.00 0.00 4.96
2101 2222 2.092323 GGCAAAACAGATAGACCCCAC 58.908 52.381 0.00 0.00 0.00 4.61
2102 2223 1.737793 GCAAAACAGATAGACCCCACG 59.262 52.381 0.00 0.00 0.00 4.94
2103 2224 2.356135 CAAAACAGATAGACCCCACGG 58.644 52.381 0.00 0.00 0.00 4.94
2104 2225 0.252197 AAACAGATAGACCCCACGGC 59.748 55.000 0.00 0.00 0.00 5.68
2105 2226 1.623542 AACAGATAGACCCCACGGCC 61.624 60.000 0.00 0.00 0.00 6.13
2106 2227 2.446036 AGATAGACCCCACGGCCC 60.446 66.667 0.00 0.00 0.00 5.80
2107 2228 2.766651 GATAGACCCCACGGCCCA 60.767 66.667 0.00 0.00 0.00 5.36
2108 2229 2.768344 ATAGACCCCACGGCCCAG 60.768 66.667 0.00 0.00 0.00 4.45
2135 2256 3.863407 GGTCTGGACCCATCTTGTC 57.137 57.895 8.48 0.00 45.68 3.18
2143 2264 3.922171 GACCCATCTTGTCCATTCTCT 57.078 47.619 0.00 0.00 0.00 3.10
2144 2265 3.539604 GACCCATCTTGTCCATTCTCTG 58.460 50.000 0.00 0.00 0.00 3.35
2145 2266 2.915604 ACCCATCTTGTCCATTCTCTGT 59.084 45.455 0.00 0.00 0.00 3.41
2146 2267 3.054802 ACCCATCTTGTCCATTCTCTGTC 60.055 47.826 0.00 0.00 0.00 3.51
2147 2268 3.539604 CCATCTTGTCCATTCTCTGTCC 58.460 50.000 0.00 0.00 0.00 4.02
2148 2269 3.193263 CATCTTGTCCATTCTCTGTCCG 58.807 50.000 0.00 0.00 0.00 4.79
2149 2270 1.550524 TCTTGTCCATTCTCTGTCCGG 59.449 52.381 0.00 0.00 0.00 5.14
2150 2271 0.036388 TTGTCCATTCTCTGTCCGGC 60.036 55.000 0.00 0.00 0.00 6.13
2151 2272 1.153349 GTCCATTCTCTGTCCGGCC 60.153 63.158 0.00 0.00 0.00 6.13
2152 2273 2.190578 CCATTCTCTGTCCGGCCC 59.809 66.667 0.00 0.00 0.00 5.80
2153 2274 2.202932 CATTCTCTGTCCGGCCCG 60.203 66.667 0.00 0.00 0.00 6.13
2154 2275 2.363795 ATTCTCTGTCCGGCCCGA 60.364 61.111 3.71 0.00 0.00 5.14
2155 2276 2.722201 ATTCTCTGTCCGGCCCGAC 61.722 63.158 16.39 16.39 0.00 4.79
2156 2277 3.881019 TTCTCTGTCCGGCCCGACT 62.881 63.158 22.34 0.00 33.70 4.18
2157 2278 3.827898 CTCTGTCCGGCCCGACTC 61.828 72.222 22.34 0.69 33.70 3.36
2158 2279 4.671590 TCTGTCCGGCCCGACTCA 62.672 66.667 22.34 8.35 33.70 3.41
2159 2280 3.461773 CTGTCCGGCCCGACTCAT 61.462 66.667 22.34 0.00 33.70 2.90
2160 2281 3.000819 TGTCCGGCCCGACTCATT 61.001 61.111 22.34 0.00 33.70 2.57
2161 2282 2.267961 GTCCGGCCCGACTCATTT 59.732 61.111 16.02 0.00 0.00 2.32
2162 2283 1.814169 GTCCGGCCCGACTCATTTC 60.814 63.158 16.02 0.00 0.00 2.17
2163 2284 2.890474 CCGGCCCGACTCATTTCG 60.890 66.667 3.71 0.00 38.80 3.46
2164 2285 2.183300 CGGCCCGACTCATTTCGA 59.817 61.111 0.00 0.00 41.78 3.71
2165 2286 1.447140 CGGCCCGACTCATTTCGAA 60.447 57.895 0.00 0.00 41.78 3.71
2166 2287 0.810031 CGGCCCGACTCATTTCGAAT 60.810 55.000 0.00 0.00 41.78 3.34
2167 2288 0.657840 GGCCCGACTCATTTCGAATG 59.342 55.000 0.00 0.00 41.78 2.67
2168 2289 0.028110 GCCCGACTCATTTCGAATGC 59.972 55.000 0.00 0.00 41.78 3.56
2169 2290 1.368641 CCCGACTCATTTCGAATGCA 58.631 50.000 0.00 0.00 41.78 3.96
2170 2291 1.737236 CCCGACTCATTTCGAATGCAA 59.263 47.619 0.00 0.00 41.78 4.08
2171 2292 2.161410 CCCGACTCATTTCGAATGCAAA 59.839 45.455 0.00 0.00 41.78 3.68
2172 2293 3.163594 CCGACTCATTTCGAATGCAAAC 58.836 45.455 0.00 0.00 41.78 2.93
2173 2294 3.364864 CCGACTCATTTCGAATGCAAACA 60.365 43.478 0.00 0.00 41.78 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.623081 TTTCTTGTCATCGCCGACGC 61.623 55.000 0.00 0.00 38.84 5.19
10 11 0.366871 CTTTCTTGTCATCGCCGACG 59.633 55.000 0.00 0.00 38.84 5.12
11 12 0.721718 CCTTTCTTGTCATCGCCGAC 59.278 55.000 0.00 0.00 36.40 4.79
12 13 0.606096 TCCTTTCTTGTCATCGCCGA 59.394 50.000 0.00 0.00 0.00 5.54
13 14 1.002366 CTCCTTTCTTGTCATCGCCG 58.998 55.000 0.00 0.00 0.00 6.46
14 15 1.066143 TCCTCCTTTCTTGTCATCGCC 60.066 52.381 0.00 0.00 0.00 5.54
15 16 2.093973 TCTCCTCCTTTCTTGTCATCGC 60.094 50.000 0.00 0.00 0.00 4.58
16 17 3.516615 GTCTCCTCCTTTCTTGTCATCG 58.483 50.000 0.00 0.00 0.00 3.84
17 18 3.677424 CGGTCTCCTCCTTTCTTGTCATC 60.677 52.174 0.00 0.00 0.00 2.92
18 19 2.234908 CGGTCTCCTCCTTTCTTGTCAT 59.765 50.000 0.00 0.00 0.00 3.06
19 20 1.618837 CGGTCTCCTCCTTTCTTGTCA 59.381 52.381 0.00 0.00 0.00 3.58
20 21 1.893801 TCGGTCTCCTCCTTTCTTGTC 59.106 52.381 0.00 0.00 0.00 3.18
21 22 1.896465 CTCGGTCTCCTCCTTTCTTGT 59.104 52.381 0.00 0.00 0.00 3.16
22 23 2.165437 CTCTCGGTCTCCTCCTTTCTTG 59.835 54.545 0.00 0.00 0.00 3.02
23 24 2.452505 CTCTCGGTCTCCTCCTTTCTT 58.547 52.381 0.00 0.00 0.00 2.52
24 25 1.341581 CCTCTCGGTCTCCTCCTTTCT 60.342 57.143 0.00 0.00 0.00 2.52
25 26 1.107945 CCTCTCGGTCTCCTCCTTTC 58.892 60.000 0.00 0.00 0.00 2.62
26 27 0.973496 GCCTCTCGGTCTCCTCCTTT 60.973 60.000 0.00 0.00 0.00 3.11
27 28 1.380650 GCCTCTCGGTCTCCTCCTT 60.381 63.158 0.00 0.00 0.00 3.36
28 29 2.277404 GCCTCTCGGTCTCCTCCT 59.723 66.667 0.00 0.00 0.00 3.69
29 30 3.213402 CGCCTCTCGGTCTCCTCC 61.213 72.222 0.00 0.00 33.78 4.30
47 48 4.194720 ATCACCGAGCTCGCCGTC 62.195 66.667 30.49 0.00 38.18 4.79
48 49 4.498520 CATCACCGAGCTCGCCGT 62.499 66.667 30.49 20.54 38.18 5.68
49 50 4.193334 TCATCACCGAGCTCGCCG 62.193 66.667 30.49 21.83 38.18 6.46
50 51 2.279120 CTCATCACCGAGCTCGCC 60.279 66.667 30.49 0.00 38.18 5.54
56 57 1.297967 CTCGTCGCTCATCACCGAG 60.298 63.158 0.00 0.00 39.02 4.63
57 58 1.743995 TCTCGTCGCTCATCACCGA 60.744 57.895 0.00 0.00 0.00 4.69
58 59 1.583967 GTCTCGTCGCTCATCACCG 60.584 63.158 0.00 0.00 0.00 4.94
59 60 1.583967 CGTCTCGTCGCTCATCACC 60.584 63.158 0.00 0.00 0.00 4.02
60 61 3.969631 CGTCTCGTCGCTCATCAC 58.030 61.111 0.00 0.00 0.00 3.06
68 69 2.573689 GACCTTCGCGTCTCGTCG 60.574 66.667 5.77 0.00 39.67 5.12
69 70 2.573689 CGACCTTCGCGTCTCGTC 60.574 66.667 5.77 7.13 39.67 4.20
70 71 4.099170 CCGACCTTCGCGTCTCGT 62.099 66.667 5.77 0.00 38.82 4.18
78 79 4.814294 CCCTTCCGCCGACCTTCG 62.814 72.222 0.00 0.00 40.07 3.79
79 80 3.703127 ACCCTTCCGCCGACCTTC 61.703 66.667 0.00 0.00 0.00 3.46
80 81 4.016706 CACCCTTCCGCCGACCTT 62.017 66.667 0.00 0.00 0.00 3.50
83 84 4.011517 TTCCACCCTTCCGCCGAC 62.012 66.667 0.00 0.00 0.00 4.79
84 85 4.011517 GTTCCACCCTTCCGCCGA 62.012 66.667 0.00 0.00 0.00 5.54
85 86 4.323477 TGTTCCACCCTTCCGCCG 62.323 66.667 0.00 0.00 0.00 6.46
86 87 2.671963 GTGTTCCACCCTTCCGCC 60.672 66.667 0.00 0.00 0.00 6.13
96 97 0.181587 ATCACGTTGGTGGTGTTCCA 59.818 50.000 0.00 0.00 44.50 3.53
97 98 3.015516 ATCACGTTGGTGGTGTTCC 57.984 52.632 0.00 0.00 44.50 3.62
104 105 3.027170 GCTCGCCATCACGTTGGTG 62.027 63.158 12.69 12.69 46.54 4.17
105 106 2.742372 GCTCGCCATCACGTTGGT 60.742 61.111 8.05 0.00 39.11 3.67
106 107 3.853330 CGCTCGCCATCACGTTGG 61.853 66.667 1.66 1.66 39.94 3.77
107 108 3.853330 CCGCTCGCCATCACGTTG 61.853 66.667 0.00 0.00 0.00 4.10
120 121 4.961511 TTGCTTCGTCGTGCCGCT 62.962 61.111 9.61 0.00 0.00 5.52
121 122 4.430423 CTTGCTTCGTCGTGCCGC 62.430 66.667 9.61 0.00 0.00 6.53
122 123 4.430423 GCTTGCTTCGTCGTGCCG 62.430 66.667 9.61 3.87 0.00 5.69
123 124 4.430423 CGCTTGCTTCGTCGTGCC 62.430 66.667 9.61 0.00 0.00 5.01
124 125 3.340721 CTCGCTTGCTTCGTCGTGC 62.341 63.158 6.15 6.15 0.00 5.34
125 126 2.720758 CCTCGCTTGCTTCGTCGTG 61.721 63.158 0.00 0.00 0.00 4.35
126 127 2.430921 CCTCGCTTGCTTCGTCGT 60.431 61.111 0.00 0.00 0.00 4.34
127 128 3.843240 GCCTCGCTTGCTTCGTCG 61.843 66.667 0.00 0.00 0.00 5.12
128 129 3.491652 GGCCTCGCTTGCTTCGTC 61.492 66.667 0.00 0.00 0.00 4.20
129 130 3.825160 TTGGCCTCGCTTGCTTCGT 62.825 57.895 3.32 0.00 0.00 3.85
130 131 3.049674 TTGGCCTCGCTTGCTTCG 61.050 61.111 3.32 0.00 0.00 3.79
131 132 2.563427 GTTGGCCTCGCTTGCTTC 59.437 61.111 3.32 0.00 0.00 3.86
132 133 3.357079 CGTTGGCCTCGCTTGCTT 61.357 61.111 3.32 0.00 0.00 3.91
162 163 0.036010 AAGATCTGCCGAACCAGTGG 60.036 55.000 7.91 7.91 34.47 4.00
163 164 1.813513 AAAGATCTGCCGAACCAGTG 58.186 50.000 0.00 0.00 34.47 3.66
164 165 2.568623 AAAAGATCTGCCGAACCAGT 57.431 45.000 0.00 0.00 34.47 4.00
165 166 6.316390 AGTTATTAAAAGATCTGCCGAACCAG 59.684 38.462 0.00 0.00 0.00 4.00
166 167 6.093495 CAGTTATTAAAAGATCTGCCGAACCA 59.907 38.462 0.00 0.00 0.00 3.67
167 168 6.458342 CCAGTTATTAAAAGATCTGCCGAACC 60.458 42.308 0.00 0.00 0.00 3.62
168 169 6.487103 CCAGTTATTAAAAGATCTGCCGAAC 58.513 40.000 0.00 0.00 0.00 3.95
169 170 5.065988 GCCAGTTATTAAAAGATCTGCCGAA 59.934 40.000 0.00 0.00 0.00 4.30
170 171 4.574828 GCCAGTTATTAAAAGATCTGCCGA 59.425 41.667 0.00 0.00 0.00 5.54
171 172 4.335315 TGCCAGTTATTAAAAGATCTGCCG 59.665 41.667 0.00 0.00 0.00 5.69
172 173 5.835113 TGCCAGTTATTAAAAGATCTGCC 57.165 39.130 0.00 0.00 0.00 4.85
173 174 6.856895 AGTTGCCAGTTATTAAAAGATCTGC 58.143 36.000 0.00 0.00 0.00 4.26
174 175 9.132521 CAAAGTTGCCAGTTATTAAAAGATCTG 57.867 33.333 0.00 0.00 0.00 2.90
193 194 1.762370 AGGGGGTCTTTTGCAAAGTTG 59.238 47.619 12.41 7.21 0.00 3.16
194 195 1.762370 CAGGGGGTCTTTTGCAAAGTT 59.238 47.619 12.41 0.00 0.00 2.66
195 196 1.413118 CAGGGGGTCTTTTGCAAAGT 58.587 50.000 12.41 0.00 0.00 2.66
196 197 0.681175 CCAGGGGGTCTTTTGCAAAG 59.319 55.000 12.41 7.09 0.00 2.77
197 198 2.833244 CCAGGGGGTCTTTTGCAAA 58.167 52.632 8.05 8.05 0.00 3.68
198 199 4.617200 CCAGGGGGTCTTTTGCAA 57.383 55.556 0.00 0.00 0.00 4.08
215 216 1.605712 CCGCTCGAATATGGAGGGAAC 60.606 57.143 17.57 0.00 44.57 3.62
216 217 0.679505 CCGCTCGAATATGGAGGGAA 59.320 55.000 17.57 0.00 44.57 3.97
217 218 1.816863 GCCGCTCGAATATGGAGGGA 61.817 60.000 17.57 0.00 44.57 4.20
218 219 1.374758 GCCGCTCGAATATGGAGGG 60.375 63.158 11.86 11.86 42.30 4.30
219 220 0.668706 CAGCCGCTCGAATATGGAGG 60.669 60.000 0.00 0.00 32.10 4.30
220 221 0.315251 TCAGCCGCTCGAATATGGAG 59.685 55.000 0.00 0.72 34.62 3.86
221 222 0.315251 CTCAGCCGCTCGAATATGGA 59.685 55.000 0.00 0.00 0.00 3.41
222 223 0.315251 TCTCAGCCGCTCGAATATGG 59.685 55.000 0.00 0.00 0.00 2.74
223 224 1.413382 GTCTCAGCCGCTCGAATATG 58.587 55.000 0.00 0.00 0.00 1.78
224 225 0.039978 CGTCTCAGCCGCTCGAATAT 60.040 55.000 0.00 0.00 0.00 1.28
225 226 1.093496 TCGTCTCAGCCGCTCGAATA 61.093 55.000 0.00 0.00 0.00 1.75
226 227 1.729470 ATCGTCTCAGCCGCTCGAAT 61.729 55.000 6.06 0.00 34.38 3.34
227 228 2.407428 ATCGTCTCAGCCGCTCGAA 61.407 57.895 6.06 0.00 34.38 3.71
228 229 2.824489 ATCGTCTCAGCCGCTCGA 60.824 61.111 4.58 4.58 35.14 4.04
229 230 2.653448 CATCGTCTCAGCCGCTCG 60.653 66.667 0.00 0.00 0.00 5.03
230 231 1.875813 CACATCGTCTCAGCCGCTC 60.876 63.158 0.00 0.00 0.00 5.03
231 232 2.182791 CACATCGTCTCAGCCGCT 59.817 61.111 0.00 0.00 0.00 5.52
232 233 2.161486 GTCACATCGTCTCAGCCGC 61.161 63.158 0.00 0.00 0.00 6.53
233 234 0.799917 CTGTCACATCGTCTCAGCCG 60.800 60.000 0.00 0.00 0.00 5.52
234 235 0.244994 ACTGTCACATCGTCTCAGCC 59.755 55.000 0.00 0.00 0.00 4.85
235 236 1.068264 TGACTGTCACATCGTCTCAGC 60.068 52.381 6.36 0.00 0.00 4.26
236 237 2.997485 TGACTGTCACATCGTCTCAG 57.003 50.000 6.36 0.00 0.00 3.35
237 238 3.642705 CTTTGACTGTCACATCGTCTCA 58.357 45.455 10.56 0.00 0.00 3.27
238 239 2.410053 GCTTTGACTGTCACATCGTCTC 59.590 50.000 10.56 0.00 0.00 3.36
239 240 2.224042 TGCTTTGACTGTCACATCGTCT 60.224 45.455 10.56 0.00 0.00 4.18
240 241 2.096713 GTGCTTTGACTGTCACATCGTC 60.097 50.000 10.56 0.00 0.00 4.20
241 242 1.867233 GTGCTTTGACTGTCACATCGT 59.133 47.619 10.56 0.00 0.00 3.73
242 243 1.866601 TGTGCTTTGACTGTCACATCG 59.133 47.619 10.56 0.59 34.87 3.84
243 244 2.874701 AGTGTGCTTTGACTGTCACATC 59.125 45.455 10.56 0.04 40.88 3.06
244 245 2.923121 AGTGTGCTTTGACTGTCACAT 58.077 42.857 10.56 0.00 40.88 3.21
245 246 2.401583 AGTGTGCTTTGACTGTCACA 57.598 45.000 10.56 2.87 37.14 3.58
246 247 2.223340 CCAAGTGTGCTTTGACTGTCAC 60.223 50.000 10.56 0.00 31.49 3.67
247 248 2.016318 CCAAGTGTGCTTTGACTGTCA 58.984 47.619 6.36 6.36 31.49 3.58
248 249 1.268743 GCCAAGTGTGCTTTGACTGTC 60.269 52.381 0.00 0.00 31.49 3.51
249 250 0.740737 GCCAAGTGTGCTTTGACTGT 59.259 50.000 0.00 0.00 31.49 3.55
250 251 0.740149 TGCCAAGTGTGCTTTGACTG 59.260 50.000 0.00 0.00 31.49 3.51
251 252 1.027357 CTGCCAAGTGTGCTTTGACT 58.973 50.000 0.00 0.00 31.49 3.41
252 253 0.595825 GCTGCCAAGTGTGCTTTGAC 60.596 55.000 0.00 0.00 31.49 3.18
253 254 1.735360 GCTGCCAAGTGTGCTTTGA 59.265 52.632 0.00 0.00 31.49 2.69
254 255 1.659335 CGCTGCCAAGTGTGCTTTG 60.659 57.895 0.00 0.00 31.49 2.77
255 256 2.723746 CGCTGCCAAGTGTGCTTT 59.276 55.556 0.00 0.00 31.49 3.51
256 257 3.289834 CCGCTGCCAAGTGTGCTT 61.290 61.111 0.00 0.00 34.82 3.91
257 258 4.569180 ACCGCTGCCAAGTGTGCT 62.569 61.111 0.00 0.00 31.58 4.40
258 259 3.595758 AACCGCTGCCAAGTGTGC 61.596 61.111 0.00 0.00 31.58 4.57
259 260 2.186160 TCAACCGCTGCCAAGTGTG 61.186 57.895 0.00 0.00 31.58 3.82
260 261 2.186826 GTCAACCGCTGCCAAGTGT 61.187 57.895 0.00 0.00 31.58 3.55
261 262 1.845809 GAGTCAACCGCTGCCAAGTG 61.846 60.000 0.00 0.00 0.00 3.16
262 263 1.598130 GAGTCAACCGCTGCCAAGT 60.598 57.895 0.00 0.00 0.00 3.16
263 264 2.671177 CGAGTCAACCGCTGCCAAG 61.671 63.158 0.00 0.00 0.00 3.61
264 265 2.664851 CGAGTCAACCGCTGCCAA 60.665 61.111 0.00 0.00 0.00 4.52
265 266 4.680237 CCGAGTCAACCGCTGCCA 62.680 66.667 0.00 0.00 0.00 4.92
271 272 2.907897 GATCTGGCCCGAGTCAACCG 62.908 65.000 0.00 0.00 0.00 4.44
272 273 1.153349 GATCTGGCCCGAGTCAACC 60.153 63.158 0.00 0.00 0.00 3.77
273 274 0.460987 CTGATCTGGCCCGAGTCAAC 60.461 60.000 0.00 0.00 0.00 3.18
274 275 1.900351 CTGATCTGGCCCGAGTCAA 59.100 57.895 0.00 0.00 0.00 3.18
275 276 2.725312 GCTGATCTGGCCCGAGTCA 61.725 63.158 0.00 4.81 0.00 3.41
276 277 2.037620 ATGCTGATCTGGCCCGAGTC 62.038 60.000 0.00 0.00 0.00 3.36
277 278 2.068821 ATGCTGATCTGGCCCGAGT 61.069 57.895 0.00 0.00 0.00 4.18
278 279 1.597302 CATGCTGATCTGGCCCGAG 60.597 63.158 0.00 0.00 0.00 4.63
279 280 1.048160 TACATGCTGATCTGGCCCGA 61.048 55.000 0.00 0.00 0.00 5.14
280 281 0.035881 ATACATGCTGATCTGGCCCG 59.964 55.000 0.00 0.00 0.00 6.13
281 282 1.202855 ACATACATGCTGATCTGGCCC 60.203 52.381 0.00 0.00 0.00 5.80
282 283 2.267174 ACATACATGCTGATCTGGCC 57.733 50.000 0.00 0.00 0.00 5.36
283 284 3.993081 GTCTACATACATGCTGATCTGGC 59.007 47.826 1.46 3.25 0.00 4.85
284 285 4.039609 TGGTCTACATACATGCTGATCTGG 59.960 45.833 1.46 0.00 0.00 3.86
285 286 5.205759 TGGTCTACATACATGCTGATCTG 57.794 43.478 3.07 0.00 0.00 2.90
286 287 5.876651 TTGGTCTACATACATGCTGATCT 57.123 39.130 3.07 0.00 0.00 2.75
287 288 5.237344 GGTTTGGTCTACATACATGCTGATC 59.763 44.000 3.07 0.00 33.32 2.92
288 289 5.126067 GGTTTGGTCTACATACATGCTGAT 58.874 41.667 3.07 0.00 33.32 2.90
289 290 4.513442 GGTTTGGTCTACATACATGCTGA 58.487 43.478 3.07 0.00 33.32 4.26
290 291 3.309682 CGGTTTGGTCTACATACATGCTG 59.690 47.826 0.00 0.00 33.32 4.41
291 292 3.055385 ACGGTTTGGTCTACATACATGCT 60.055 43.478 0.00 0.00 33.32 3.79
292 293 3.267483 ACGGTTTGGTCTACATACATGC 58.733 45.455 0.00 0.00 33.32 4.06
293 294 8.708742 CATTATACGGTTTGGTCTACATACATG 58.291 37.037 0.00 0.00 33.32 3.21
294 295 7.876068 CCATTATACGGTTTGGTCTACATACAT 59.124 37.037 0.00 0.00 33.32 2.29
295 296 7.069702 TCCATTATACGGTTTGGTCTACATACA 59.930 37.037 0.00 0.00 33.32 2.29
296 297 7.436118 TCCATTATACGGTTTGGTCTACATAC 58.564 38.462 0.00 0.00 0.00 2.39
297 298 7.600231 TCCATTATACGGTTTGGTCTACATA 57.400 36.000 0.00 0.00 0.00 2.29
298 299 6.488769 TCCATTATACGGTTTGGTCTACAT 57.511 37.500 0.00 0.00 0.00 2.29
299 300 5.936187 TCCATTATACGGTTTGGTCTACA 57.064 39.130 0.00 0.00 0.00 2.74
300 301 5.632347 CGATCCATTATACGGTTTGGTCTAC 59.368 44.000 0.00 0.00 0.00 2.59
301 302 5.302568 ACGATCCATTATACGGTTTGGTCTA 59.697 40.000 0.00 0.00 0.00 2.59
302 303 4.100498 ACGATCCATTATACGGTTTGGTCT 59.900 41.667 0.00 0.00 0.00 3.85
303 304 4.374399 ACGATCCATTATACGGTTTGGTC 58.626 43.478 0.00 0.00 0.00 4.02
304 305 4.411256 ACGATCCATTATACGGTTTGGT 57.589 40.909 0.00 0.00 0.00 3.67
305 306 5.775686 TCTACGATCCATTATACGGTTTGG 58.224 41.667 0.00 0.00 0.00 3.28
306 307 7.061905 GTCATCTACGATCCATTATACGGTTTG 59.938 40.741 0.00 0.00 0.00 2.93
307 308 7.088905 GTCATCTACGATCCATTATACGGTTT 58.911 38.462 0.00 0.00 0.00 3.27
308 309 6.349944 GGTCATCTACGATCCATTATACGGTT 60.350 42.308 0.00 0.00 0.00 4.44
309 310 5.125097 GGTCATCTACGATCCATTATACGGT 59.875 44.000 0.00 0.00 0.00 4.83
310 311 5.357314 AGGTCATCTACGATCCATTATACGG 59.643 44.000 0.00 0.00 0.00 4.02
311 312 6.316640 AGAGGTCATCTACGATCCATTATACG 59.683 42.308 0.00 0.00 36.10 3.06
312 313 7.633193 AGAGGTCATCTACGATCCATTATAC 57.367 40.000 0.00 0.00 36.10 1.47
313 314 8.769359 TCTAGAGGTCATCTACGATCCATTATA 58.231 37.037 0.00 0.00 39.64 0.98
314 315 7.634718 TCTAGAGGTCATCTACGATCCATTAT 58.365 38.462 0.00 0.00 39.64 1.28
315 316 7.017319 TCTAGAGGTCATCTACGATCCATTA 57.983 40.000 0.00 0.00 39.64 1.90
316 317 5.882040 TCTAGAGGTCATCTACGATCCATT 58.118 41.667 0.00 0.00 39.64 3.16
317 318 5.506730 TCTAGAGGTCATCTACGATCCAT 57.493 43.478 0.00 0.00 39.64 3.41
318 319 4.976540 TCTAGAGGTCATCTACGATCCA 57.023 45.455 0.00 0.00 39.64 3.41
319 320 5.064558 TGTTCTAGAGGTCATCTACGATCC 58.935 45.833 0.00 0.00 39.64 3.36
320 321 6.261381 ACTTGTTCTAGAGGTCATCTACGATC 59.739 42.308 0.00 0.00 39.64 3.69
321 322 6.123651 ACTTGTTCTAGAGGTCATCTACGAT 58.876 40.000 0.00 0.00 39.64 3.73
322 323 5.498393 ACTTGTTCTAGAGGTCATCTACGA 58.502 41.667 0.00 0.00 39.64 3.43
323 324 5.821516 ACTTGTTCTAGAGGTCATCTACG 57.178 43.478 0.00 0.00 39.64 3.51
324 325 7.603651 TCAAACTTGTTCTAGAGGTCATCTAC 58.396 38.462 0.00 0.00 39.64 2.59
325 326 7.776618 TCAAACTTGTTCTAGAGGTCATCTA 57.223 36.000 0.00 0.00 39.64 1.98
326 327 6.672266 TCAAACTTGTTCTAGAGGTCATCT 57.328 37.500 0.00 0.00 42.47 2.90
327 328 7.064016 GTCATCAAACTTGTTCTAGAGGTCATC 59.936 40.741 0.00 0.00 0.00 2.92
328 329 6.876257 GTCATCAAACTTGTTCTAGAGGTCAT 59.124 38.462 0.00 0.00 0.00 3.06
329 330 6.042093 AGTCATCAAACTTGTTCTAGAGGTCA 59.958 38.462 0.00 0.00 0.00 4.02
330 331 6.367422 CAGTCATCAAACTTGTTCTAGAGGTC 59.633 42.308 0.00 0.00 0.00 3.85
331 332 6.183361 ACAGTCATCAAACTTGTTCTAGAGGT 60.183 38.462 0.00 0.00 0.00 3.85
332 333 6.226787 ACAGTCATCAAACTTGTTCTAGAGG 58.773 40.000 0.00 0.00 0.00 3.69
333 334 8.994429 ATACAGTCATCAAACTTGTTCTAGAG 57.006 34.615 0.00 0.00 0.00 2.43
334 335 9.208022 CAATACAGTCATCAAACTTGTTCTAGA 57.792 33.333 0.00 0.00 0.00 2.43
335 336 7.959651 GCAATACAGTCATCAAACTTGTTCTAG 59.040 37.037 0.00 0.00 0.00 2.43
336 337 7.360017 CGCAATACAGTCATCAAACTTGTTCTA 60.360 37.037 0.00 0.00 0.00 2.10
337 338 6.566564 CGCAATACAGTCATCAAACTTGTTCT 60.567 38.462 0.00 0.00 0.00 3.01
338 339 5.565259 CGCAATACAGTCATCAAACTTGTTC 59.435 40.000 0.00 0.00 0.00 3.18
339 340 5.451908 CGCAATACAGTCATCAAACTTGTT 58.548 37.500 0.00 0.00 0.00 2.83
340 341 4.083324 CCGCAATACAGTCATCAAACTTGT 60.083 41.667 0.00 0.00 0.00 3.16
341 342 4.406069 CCGCAATACAGTCATCAAACTTG 58.594 43.478 0.00 0.00 0.00 3.16
342 343 3.440173 CCCGCAATACAGTCATCAAACTT 59.560 43.478 0.00 0.00 0.00 2.66
343 344 3.009723 CCCGCAATACAGTCATCAAACT 58.990 45.455 0.00 0.00 0.00 2.66
344 345 2.747446 ACCCGCAATACAGTCATCAAAC 59.253 45.455 0.00 0.00 0.00 2.93
345 346 3.066291 ACCCGCAATACAGTCATCAAA 57.934 42.857 0.00 0.00 0.00 2.69
346 347 2.779755 ACCCGCAATACAGTCATCAA 57.220 45.000 0.00 0.00 0.00 2.57
347 348 4.415881 AATACCCGCAATACAGTCATCA 57.584 40.909 0.00 0.00 0.00 3.07
348 349 4.574828 ACAAATACCCGCAATACAGTCATC 59.425 41.667 0.00 0.00 0.00 2.92
349 350 4.523083 ACAAATACCCGCAATACAGTCAT 58.477 39.130 0.00 0.00 0.00 3.06
350 351 3.945346 ACAAATACCCGCAATACAGTCA 58.055 40.909 0.00 0.00 0.00 3.41
351 352 5.352016 TGTTACAAATACCCGCAATACAGTC 59.648 40.000 0.00 0.00 0.00 3.51
352 353 5.247084 TGTTACAAATACCCGCAATACAGT 58.753 37.500 0.00 0.00 0.00 3.55
353 354 5.804692 TGTTACAAATACCCGCAATACAG 57.195 39.130 0.00 0.00 0.00 2.74
354 355 5.472478 TGTTGTTACAAATACCCGCAATACA 59.528 36.000 0.00 0.00 0.00 2.29
355 356 5.940595 TGTTGTTACAAATACCCGCAATAC 58.059 37.500 0.00 0.00 0.00 1.89
356 357 5.124138 CCTGTTGTTACAAATACCCGCAATA 59.876 40.000 0.00 0.00 32.92 1.90
357 358 4.082463 CCTGTTGTTACAAATACCCGCAAT 60.082 41.667 0.00 0.00 32.92 3.56
358 359 3.253677 CCTGTTGTTACAAATACCCGCAA 59.746 43.478 0.00 0.00 32.92 4.85
359 360 2.814919 CCTGTTGTTACAAATACCCGCA 59.185 45.455 0.00 0.00 32.92 5.69
360 361 2.162809 CCCTGTTGTTACAAATACCCGC 59.837 50.000 0.00 0.00 32.92 6.13
361 362 3.437741 GTCCCTGTTGTTACAAATACCCG 59.562 47.826 0.00 0.00 32.92 5.28
362 363 4.659115 AGTCCCTGTTGTTACAAATACCC 58.341 43.478 0.00 0.00 32.92 3.69
363 364 7.574404 GCTTTAGTCCCTGTTGTTACAAATACC 60.574 40.741 0.00 0.00 32.92 2.73
364 365 7.174426 AGCTTTAGTCCCTGTTGTTACAAATAC 59.826 37.037 0.00 0.00 32.92 1.89
365 366 7.228590 AGCTTTAGTCCCTGTTGTTACAAATA 58.771 34.615 0.00 0.00 32.92 1.40
366 367 6.068670 AGCTTTAGTCCCTGTTGTTACAAAT 58.931 36.000 0.00 0.00 32.92 2.32
367 368 5.442391 AGCTTTAGTCCCTGTTGTTACAAA 58.558 37.500 0.00 0.00 32.92 2.83
368 369 5.043737 AGCTTTAGTCCCTGTTGTTACAA 57.956 39.130 0.00 0.00 32.92 2.41
369 370 4.699925 AGCTTTAGTCCCTGTTGTTACA 57.300 40.909 0.00 0.00 0.00 2.41
370 371 5.119743 CGTTAGCTTTAGTCCCTGTTGTTAC 59.880 44.000 0.00 0.00 0.00 2.50
371 372 5.232463 CGTTAGCTTTAGTCCCTGTTGTTA 58.768 41.667 0.00 0.00 0.00 2.41
372 373 4.062991 CGTTAGCTTTAGTCCCTGTTGTT 58.937 43.478 0.00 0.00 0.00 2.83
373 374 3.660865 CGTTAGCTTTAGTCCCTGTTGT 58.339 45.455 0.00 0.00 0.00 3.32
374 375 2.415512 GCGTTAGCTTTAGTCCCTGTTG 59.584 50.000 0.00 0.00 41.01 3.33
375 376 2.614734 GGCGTTAGCTTTAGTCCCTGTT 60.615 50.000 0.00 0.00 44.37 3.16
376 377 1.066358 GGCGTTAGCTTTAGTCCCTGT 60.066 52.381 0.00 0.00 44.37 4.00
377 378 1.066430 TGGCGTTAGCTTTAGTCCCTG 60.066 52.381 0.00 0.00 44.37 4.45
378 379 1.272807 TGGCGTTAGCTTTAGTCCCT 58.727 50.000 0.00 0.00 44.37 4.20
379 380 2.103537 TTGGCGTTAGCTTTAGTCCC 57.896 50.000 0.00 0.00 44.37 4.46
380 381 4.186159 TGTATTGGCGTTAGCTTTAGTCC 58.814 43.478 0.00 0.00 44.37 3.85
381 382 5.350640 ACTTGTATTGGCGTTAGCTTTAGTC 59.649 40.000 0.00 0.00 44.37 2.59
382 383 5.243207 ACTTGTATTGGCGTTAGCTTTAGT 58.757 37.500 0.00 0.00 44.37 2.24
383 384 5.796350 ACTTGTATTGGCGTTAGCTTTAG 57.204 39.130 0.00 0.00 44.37 1.85
384 385 7.670009 TTTACTTGTATTGGCGTTAGCTTTA 57.330 32.000 0.00 0.00 44.37 1.85
385 386 6.563222 TTTACTTGTATTGGCGTTAGCTTT 57.437 33.333 0.00 0.00 44.37 3.51
386 387 6.404293 CCATTTACTTGTATTGGCGTTAGCTT 60.404 38.462 0.00 0.00 44.37 3.74
387 388 5.065988 CCATTTACTTGTATTGGCGTTAGCT 59.934 40.000 0.00 0.00 44.37 3.32
388 389 5.065474 TCCATTTACTTGTATTGGCGTTAGC 59.935 40.000 5.78 0.00 44.18 3.09
389 390 6.457799 GGTCCATTTACTTGTATTGGCGTTAG 60.458 42.308 5.78 0.00 0.00 2.34
390 391 5.354792 GGTCCATTTACTTGTATTGGCGTTA 59.645 40.000 5.78 0.00 0.00 3.18
391 392 4.157105 GGTCCATTTACTTGTATTGGCGTT 59.843 41.667 5.78 0.00 0.00 4.84
392 393 3.692593 GGTCCATTTACTTGTATTGGCGT 59.307 43.478 5.78 0.00 0.00 5.68
393 394 3.945285 AGGTCCATTTACTTGTATTGGCG 59.055 43.478 0.00 0.00 0.00 5.69
394 395 4.705023 ACAGGTCCATTTACTTGTATTGGC 59.295 41.667 0.00 0.00 37.85 4.52
395 396 7.065803 CACTACAGGTCCATTTACTTGTATTGG 59.934 40.741 8.02 4.74 40.04 3.16
396 397 7.822334 TCACTACAGGTCCATTTACTTGTATTG 59.178 37.037 9.07 9.07 40.04 1.90
397 398 7.913789 TCACTACAGGTCCATTTACTTGTATT 58.086 34.615 0.00 0.00 40.04 1.89
398 399 7.490657 TCACTACAGGTCCATTTACTTGTAT 57.509 36.000 0.00 0.00 40.04 2.29
399 400 6.921486 TCACTACAGGTCCATTTACTTGTA 57.079 37.500 0.00 0.00 39.94 2.41
400 401 5.818678 TCACTACAGGTCCATTTACTTGT 57.181 39.130 0.00 0.00 41.86 3.16
401 402 7.687941 AATTCACTACAGGTCCATTTACTTG 57.312 36.000 0.00 0.00 33.01 3.16
402 403 8.706322 AAAATTCACTACAGGTCCATTTACTT 57.294 30.769 0.00 0.00 0.00 2.24
403 404 8.706322 AAAAATTCACTACAGGTCCATTTACT 57.294 30.769 0.00 0.00 0.00 2.24
426 427 7.510407 ACCCCGATAAAATCCAAAAAGAAAAA 58.490 30.769 0.00 0.00 0.00 1.94
427 428 7.068686 ACCCCGATAAAATCCAAAAAGAAAA 57.931 32.000 0.00 0.00 0.00 2.29
428 429 6.295405 GGACCCCGATAAAATCCAAAAAGAAA 60.295 38.462 0.00 0.00 0.00 2.52
429 430 5.186215 GGACCCCGATAAAATCCAAAAAGAA 59.814 40.000 0.00 0.00 0.00 2.52
430 431 4.707934 GGACCCCGATAAAATCCAAAAAGA 59.292 41.667 0.00 0.00 0.00 2.52
431 432 4.142026 GGGACCCCGATAAAATCCAAAAAG 60.142 45.833 0.00 0.00 0.00 2.27
432 433 3.770388 GGGACCCCGATAAAATCCAAAAA 59.230 43.478 0.00 0.00 0.00 1.94
433 434 3.245658 TGGGACCCCGATAAAATCCAAAA 60.246 43.478 8.45 0.00 39.42 2.44
434 435 2.312140 TGGGACCCCGATAAAATCCAAA 59.688 45.455 8.45 0.00 39.42 3.28
435 436 1.923850 TGGGACCCCGATAAAATCCAA 59.076 47.619 8.45 0.00 39.42 3.53
436 437 1.597681 TGGGACCCCGATAAAATCCA 58.402 50.000 8.45 0.00 39.42 3.41
437 438 2.740506 TTGGGACCCCGATAAAATCC 57.259 50.000 8.45 0.00 39.42 3.01
438 439 5.607939 AAATTTGGGACCCCGATAAAATC 57.392 39.130 8.45 0.00 39.42 2.17
439 440 6.440965 TGTTAAATTTGGGACCCCGATAAAAT 59.559 34.615 8.45 3.94 39.42 1.82
440 441 5.778750 TGTTAAATTTGGGACCCCGATAAAA 59.221 36.000 8.45 1.31 39.42 1.52
441 442 5.185442 GTGTTAAATTTGGGACCCCGATAAA 59.815 40.000 8.45 1.73 39.42 1.40
442 443 4.705991 GTGTTAAATTTGGGACCCCGATAA 59.294 41.667 8.45 0.00 39.42 1.75
443 444 4.271661 GTGTTAAATTTGGGACCCCGATA 58.728 43.478 8.45 0.00 39.42 2.92
444 445 3.093814 GTGTTAAATTTGGGACCCCGAT 58.906 45.455 8.45 0.00 39.42 4.18
445 446 2.516906 GTGTTAAATTTGGGACCCCGA 58.483 47.619 8.45 0.00 39.42 5.14
446 447 1.546923 GGTGTTAAATTTGGGACCCCG 59.453 52.381 8.45 0.00 39.42 5.73
447 448 1.903860 GGGTGTTAAATTTGGGACCCC 59.096 52.381 8.45 2.69 37.63 4.95
448 449 1.546923 CGGGTGTTAAATTTGGGACCC 59.453 52.381 17.47 17.47 39.84 4.46
449 450 1.546923 CCGGGTGTTAAATTTGGGACC 59.453 52.381 0.00 3.59 0.00 4.46
450 451 1.067425 GCCGGGTGTTAAATTTGGGAC 60.067 52.381 2.18 0.00 0.00 4.46
451 452 1.258676 GCCGGGTGTTAAATTTGGGA 58.741 50.000 2.18 0.00 0.00 4.37
452 453 0.248012 GGCCGGGTGTTAAATTTGGG 59.752 55.000 2.18 0.00 0.00 4.12
453 454 0.248012 GGGCCGGGTGTTAAATTTGG 59.752 55.000 2.18 0.00 0.00 3.28
560 565 4.771114 TTCTGAAAGGTCAAGGACTTGA 57.229 40.909 10.52 10.52 46.27 3.02
562 567 4.335594 CGTTTTCTGAAAGGTCAAGGACTT 59.664 41.667 2.75 0.00 31.88 3.01
563 568 3.877508 CGTTTTCTGAAAGGTCAAGGACT 59.122 43.478 2.75 0.00 31.88 3.85
619 624 2.116125 GTGGTCCTGGCTTGGCTT 59.884 61.111 0.00 0.00 0.00 4.35
623 628 4.722700 CGGGGTGGTCCTGGCTTG 62.723 72.222 0.00 0.00 38.27 4.01
678 685 4.729918 GACAGGTGGGCAGGCAGG 62.730 72.222 0.00 0.00 0.00 4.85
679 686 2.249413 CTAGACAGGTGGGCAGGCAG 62.249 65.000 0.00 0.00 0.00 4.85
680 687 2.203922 TAGACAGGTGGGCAGGCA 60.204 61.111 0.00 0.00 0.00 4.75
681 688 2.586792 CTAGACAGGTGGGCAGGC 59.413 66.667 0.00 0.00 0.00 4.85
682 689 2.370445 CCCTAGACAGGTGGGCAGG 61.370 68.421 0.00 0.00 40.79 4.85
683 690 0.692419 ATCCCTAGACAGGTGGGCAG 60.692 60.000 0.00 0.00 40.79 4.85
684 691 0.691078 GATCCCTAGACAGGTGGGCA 60.691 60.000 0.00 0.00 40.79 5.36
685 692 1.411651 GGATCCCTAGACAGGTGGGC 61.412 65.000 0.00 0.00 40.79 5.36
686 693 0.764752 GGGATCCCTAGACAGGTGGG 60.765 65.000 24.69 0.00 40.79 4.61
716 723 2.930562 GGGGTGTCAGGCTCAGGT 60.931 66.667 0.00 0.00 0.00 4.00
761 775 4.295119 ACTGGGTCGTCGTGGTGC 62.295 66.667 0.00 0.00 0.00 5.01
762 776 2.049433 GACTGGGTCGTCGTGGTG 60.049 66.667 0.00 0.00 0.00 4.17
872 902 4.980805 TCGTGCGGTGTTGGGAGC 62.981 66.667 0.00 0.00 0.00 4.70
878 910 4.539083 TGGTGCTCGTGCGGTGTT 62.539 61.111 4.84 0.00 43.34 3.32
918 950 0.036875 GGGCTTAGCTGACACTTGGT 59.963 55.000 3.59 0.00 0.00 3.67
926 958 3.785859 CGCAGGGGGCTTAGCTGA 61.786 66.667 3.59 0.00 41.67 4.26
928 960 3.330720 AACGCAGGGGGCTTAGCT 61.331 61.111 3.59 0.00 41.67 3.32
969 1001 4.383861 CAGGCCACGCAGAGCAGA 62.384 66.667 5.01 0.00 32.45 4.26
1021 1053 4.715523 CCCTTTCCCGCCGAAGCA 62.716 66.667 0.00 0.00 39.83 3.91
1022 1054 3.912745 TTCCCTTTCCCGCCGAAGC 62.913 63.158 0.00 0.00 0.00 3.86
1023 1055 1.745489 CTTCCCTTTCCCGCCGAAG 60.745 63.158 0.00 0.00 0.00 3.79
1024 1056 2.349755 CTTCCCTTTCCCGCCGAA 59.650 61.111 0.00 0.00 0.00 4.30
1025 1057 3.712907 CCTTCCCTTTCCCGCCGA 61.713 66.667 0.00 0.00 0.00 5.54
1091 1129 2.895424 CGGAACACCTTGCCCCTCT 61.895 63.158 0.00 0.00 0.00 3.69
1281 1327 5.944599 AGTTGAGCTGCTACTACTACTACAA 59.055 40.000 0.15 0.00 30.67 2.41
1297 1343 1.466851 GGCCTTGGCAAAGTTGAGCT 61.467 55.000 14.04 0.00 0.00 4.09
1298 1344 1.005748 GGCCTTGGCAAAGTTGAGC 60.006 57.895 14.04 0.00 0.00 4.26
1299 1345 0.829182 AGGGCCTTGGCAAAGTTGAG 60.829 55.000 14.04 0.00 0.00 3.02
1399 1455 5.006941 CCAGACATTTGAGGCAAACAAAAAG 59.993 40.000 8.13 7.10 39.95 2.27
1423 1479 7.017055 GCAATGTGCCTATTCAAATTTCAAAC 58.983 34.615 0.00 0.00 37.42 2.93
1429 1485 5.122711 GCAAAGCAATGTGCCTATTCAAATT 59.877 36.000 0.00 0.00 46.52 1.82
1430 1486 4.632688 GCAAAGCAATGTGCCTATTCAAAT 59.367 37.500 0.00 0.00 46.52 2.32
1431 1487 3.995705 GCAAAGCAATGTGCCTATTCAAA 59.004 39.130 0.00 0.00 46.52 2.69
1432 1488 3.006644 TGCAAAGCAATGTGCCTATTCAA 59.993 39.130 0.00 0.00 46.52 2.69
1433 1489 2.561858 TGCAAAGCAATGTGCCTATTCA 59.438 40.909 0.00 0.00 46.52 2.57
1434 1490 3.235157 TGCAAAGCAATGTGCCTATTC 57.765 42.857 0.00 0.00 46.52 1.75
1436 1492 3.899052 AATGCAAAGCAATGTGCCTAT 57.101 38.095 0.00 0.00 46.52 2.57
1437 1493 3.681593 AAATGCAAAGCAATGTGCCTA 57.318 38.095 0.00 0.00 46.52 3.93
1438 1494 2.550606 CAAAATGCAAAGCAATGTGCCT 59.449 40.909 0.00 0.00 46.52 4.75
1439 1495 2.291190 ACAAAATGCAAAGCAATGTGCC 59.709 40.909 0.00 0.00 46.52 5.01
1440 1496 3.293262 CACAAAATGCAAAGCAATGTGC 58.707 40.909 16.94 0.00 43.62 4.57
1484 1558 4.713792 AATTCACAAGGTTCTCAGGAGT 57.286 40.909 0.00 0.00 0.00 3.85
1566 1640 5.757808 GCCTTCTTCTCTCATGAAGTAATCC 59.242 44.000 0.00 0.00 42.76 3.01
1585 1663 4.929808 TGTTCTTAAATCTCTCGTGCCTTC 59.070 41.667 0.00 0.00 0.00 3.46
1589 1667 3.994392 TGGTGTTCTTAAATCTCTCGTGC 59.006 43.478 0.00 0.00 0.00 5.34
1595 1673 8.738645 AGATGGTATTGGTGTTCTTAAATCTC 57.261 34.615 0.00 0.00 0.00 2.75
1601 1679 8.877864 ATTCAAAGATGGTATTGGTGTTCTTA 57.122 30.769 0.00 0.00 0.00 2.10
1613 1691 9.537192 CCGTACAGTTATTATTCAAAGATGGTA 57.463 33.333 0.00 0.00 0.00 3.25
1674 1752 0.526662 GAGACAACTGTCCCGTCGAT 59.473 55.000 6.23 0.00 45.85 3.59
1708 1791 2.032799 TGTTTTTCGTCATGTGCAGTCC 59.967 45.455 0.00 0.00 0.00 3.85
1717 1800 3.855524 GCCCGTCATTTGTTTTTCGTCAT 60.856 43.478 0.00 0.00 0.00 3.06
1718 1801 2.541999 GCCCGTCATTTGTTTTTCGTCA 60.542 45.455 0.00 0.00 0.00 4.35
1808 1905 1.068281 CCAGGACGATCACAGATCTGG 59.932 57.143 26.08 15.01 35.08 3.86
1809 1906 1.537776 GCCAGGACGATCACAGATCTG 60.538 57.143 21.37 21.37 0.00 2.90
1810 1907 0.749649 GCCAGGACGATCACAGATCT 59.250 55.000 5.57 0.00 0.00 2.75
1839 1937 0.107214 TTTCATCTGATCCGGCCACC 60.107 55.000 2.24 0.00 0.00 4.61
1883 1981 2.411547 GCAAAGATTGTTGAGACGACGG 60.412 50.000 0.00 0.00 0.00 4.79
1886 1984 4.380531 AGAAGCAAAGATTGTTGAGACGA 58.619 39.130 0.00 0.00 0.00 4.20
1895 1993 5.936686 TCAGACTTGAGAAGCAAAGATTG 57.063 39.130 0.00 0.00 35.74 2.67
1909 2020 2.227388 GCCTGGTCAATGTTCAGACTTG 59.773 50.000 0.00 0.00 35.18 3.16
1959 2075 3.002451 CGAGTAGTACGATGAGGTTGAGG 59.998 52.174 0.00 0.00 0.00 3.86
1991 2109 3.680777 TGGTTTGGAAAAGAAGGTCCT 57.319 42.857 0.00 0.00 34.77 3.85
1992 2110 4.693283 CTTTGGTTTGGAAAAGAAGGTCC 58.307 43.478 0.00 0.00 35.79 4.46
2027 2148 1.318158 GCTGGAGTTGGCCTCATTGG 61.318 60.000 3.32 0.00 42.40 3.16
2068 2189 4.958897 TTGCCCAAACGGACGGGG 62.959 66.667 7.33 3.69 43.31 5.73
2069 2190 2.491022 TTTTGCCCAAACGGACGGG 61.491 57.895 1.12 1.12 46.15 5.28
2070 2191 1.299544 GTTTTGCCCAAACGGACGG 60.300 57.895 0.00 0.00 35.64 4.79
2071 2192 4.312383 GTTTTGCCCAAACGGACG 57.688 55.556 0.00 0.00 35.64 4.79
2076 2197 3.056821 GGGTCTATCTGTTTTGCCCAAAC 60.057 47.826 2.35 2.35 44.64 2.93
2077 2198 3.161866 GGGTCTATCTGTTTTGCCCAAA 58.838 45.455 0.00 0.00 34.95 3.28
2078 2199 2.556559 GGGGTCTATCTGTTTTGCCCAA 60.557 50.000 0.00 0.00 36.46 4.12
2079 2200 1.005450 GGGGTCTATCTGTTTTGCCCA 59.995 52.381 0.00 0.00 36.46 5.36
2080 2201 1.005450 TGGGGTCTATCTGTTTTGCCC 59.995 52.381 0.00 0.00 0.00 5.36
2081 2202 2.092323 GTGGGGTCTATCTGTTTTGCC 58.908 52.381 0.00 0.00 0.00 4.52
2082 2203 1.737793 CGTGGGGTCTATCTGTTTTGC 59.262 52.381 0.00 0.00 0.00 3.68
2083 2204 2.356135 CCGTGGGGTCTATCTGTTTTG 58.644 52.381 0.00 0.00 0.00 2.44
2084 2205 1.339727 GCCGTGGGGTCTATCTGTTTT 60.340 52.381 0.00 0.00 34.97 2.43
2085 2206 0.252197 GCCGTGGGGTCTATCTGTTT 59.748 55.000 0.00 0.00 34.97 2.83
2086 2207 1.623542 GGCCGTGGGGTCTATCTGTT 61.624 60.000 0.00 0.00 34.09 3.16
2087 2208 2.064581 GGCCGTGGGGTCTATCTGT 61.065 63.158 0.00 0.00 34.09 3.41
2088 2209 2.808206 GGGCCGTGGGGTCTATCTG 61.808 68.421 0.00 0.00 38.30 2.90
2089 2210 2.446036 GGGCCGTGGGGTCTATCT 60.446 66.667 0.00 0.00 38.30 1.98
2090 2211 2.766651 TGGGCCGTGGGGTCTATC 60.767 66.667 0.00 0.00 38.30 2.08
2091 2212 2.768344 CTGGGCCGTGGGGTCTAT 60.768 66.667 0.00 0.00 38.30 1.98
2123 2244 3.054802 ACAGAGAATGGACAAGATGGGTC 60.055 47.826 0.00 0.00 34.52 4.46
2124 2245 2.915604 ACAGAGAATGGACAAGATGGGT 59.084 45.455 0.00 0.00 0.00 4.51
2125 2246 3.539604 GACAGAGAATGGACAAGATGGG 58.460 50.000 0.00 0.00 0.00 4.00
2126 2247 3.539604 GGACAGAGAATGGACAAGATGG 58.460 50.000 0.00 0.00 0.00 3.51
2127 2248 3.193263 CGGACAGAGAATGGACAAGATG 58.807 50.000 0.00 0.00 0.00 2.90
2128 2249 2.169352 CCGGACAGAGAATGGACAAGAT 59.831 50.000 0.00 0.00 0.00 2.40
2129 2250 1.550524 CCGGACAGAGAATGGACAAGA 59.449 52.381 0.00 0.00 0.00 3.02
2130 2251 2.009042 GCCGGACAGAGAATGGACAAG 61.009 57.143 5.05 0.00 0.00 3.16
2131 2252 0.036388 GCCGGACAGAGAATGGACAA 60.036 55.000 5.05 0.00 0.00 3.18
2132 2253 1.596934 GCCGGACAGAGAATGGACA 59.403 57.895 5.05 0.00 0.00 4.02
2133 2254 1.153349 GGCCGGACAGAGAATGGAC 60.153 63.158 5.05 0.00 0.00 4.02
2134 2255 2.367202 GGGCCGGACAGAGAATGGA 61.367 63.158 11.00 0.00 0.00 3.41
2135 2256 2.190578 GGGCCGGACAGAGAATGG 59.809 66.667 11.00 0.00 0.00 3.16
2136 2257 2.202932 CGGGCCGGACAGAGAATG 60.203 66.667 20.56 0.00 0.00 2.67
2137 2258 2.363795 TCGGGCCGGACAGAGAAT 60.364 61.111 27.98 0.00 0.00 2.40
2138 2259 3.379445 GTCGGGCCGGACAGAGAA 61.379 66.667 32.14 0.00 36.91 2.87
2139 2260 4.361971 AGTCGGGCCGGACAGAGA 62.362 66.667 36.25 2.08 39.42 3.10
2140 2261 3.827898 GAGTCGGGCCGGACAGAG 61.828 72.222 36.25 0.00 39.42 3.35
2141 2262 3.957435 ATGAGTCGGGCCGGACAGA 62.957 63.158 36.25 25.28 39.42 3.41
2142 2263 2.521958 AAATGAGTCGGGCCGGACAG 62.522 60.000 36.25 4.81 39.42 3.51
2143 2264 2.515996 GAAATGAGTCGGGCCGGACA 62.516 60.000 36.25 22.34 39.42 4.02
2144 2265 1.814169 GAAATGAGTCGGGCCGGAC 60.814 63.158 30.62 30.62 37.19 4.79
2145 2266 2.582436 GAAATGAGTCGGGCCGGA 59.418 61.111 27.98 9.29 0.00 5.14
2146 2267 2.845752 TTCGAAATGAGTCGGGCCGG 62.846 60.000 27.98 7.65 41.43 6.13
2147 2268 0.810031 ATTCGAAATGAGTCGGGCCG 60.810 55.000 22.51 22.51 41.43 6.13
2148 2269 0.657840 CATTCGAAATGAGTCGGGCC 59.342 55.000 0.00 0.00 41.43 5.80
2149 2270 0.028110 GCATTCGAAATGAGTCGGGC 59.972 55.000 0.00 0.00 41.43 6.13
2150 2271 1.368641 TGCATTCGAAATGAGTCGGG 58.631 50.000 0.00 0.00 41.43 5.14
2151 2272 3.163594 GTTTGCATTCGAAATGAGTCGG 58.836 45.455 0.00 0.00 41.43 4.79
2152 2273 3.809234 TGTTTGCATTCGAAATGAGTCG 58.191 40.909 0.00 0.00 42.48 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.