Multiple sequence alignment - TraesCS6B01G324500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G324500 chr6B 100.000 2346 0 0 1 2346 573742781 573740436 0.000000e+00 4333
1 TraesCS6B01G324500 chr6B 94.105 458 22 4 1890 2346 572609206 572608753 0.000000e+00 691
2 TraesCS6B01G324500 chr6B 92.157 459 31 4 1890 2346 538856887 538856432 0.000000e+00 643
3 TraesCS6B01G324500 chr6B 91.904 457 35 1 1890 2346 583490436 583490890 2.540000e-179 638
4 TraesCS6B01G324500 chr6B 73.871 1351 328 22 3 1342 478884224 478882888 1.240000e-142 516
5 TraesCS6B01G324500 chr3B 90.600 1266 112 5 78 1342 422192554 422193813 0.000000e+00 1672
6 TraesCS6B01G324500 chr3B 92.998 457 30 1 1890 2346 491602402 491601948 0.000000e+00 665
7 TraesCS6B01G324500 chr3B 79.915 473 93 2 869 1340 643277568 643277097 1.730000e-91 346
8 TraesCS6B01G324500 chr1B 96.491 456 14 1 1891 2346 430121808 430121355 0.000000e+00 752
9 TraesCS6B01G324500 chr1B 91.503 459 31 7 1890 2346 70996122 70996574 1.980000e-175 625
10 TraesCS6B01G324500 chr1B 91.304 460 35 4 1888 2346 433228473 433228018 7.120000e-175 623
11 TraesCS6B01G324500 chr1B 80.778 463 85 3 881 1342 33827376 33827835 2.220000e-95 359
12 TraesCS6B01G324500 chr5B 96.372 441 13 3 1907 2346 12718462 12718900 0.000000e+00 723
13 TraesCS6B01G324500 chr6D 89.748 556 42 12 1343 1891 467820345 467819798 0.000000e+00 697
14 TraesCS6B01G324500 chr2D 89.568 556 43 12 1343 1891 324349902 324350449 0.000000e+00 691
15 TraesCS6B01G324500 chr2D 89.568 556 42 13 1343 1891 478112730 478113276 0.000000e+00 691
16 TraesCS6B01G324500 chr3D 88.829 555 55 6 1341 1891 332415839 332416390 0.000000e+00 675
17 TraesCS6B01G324500 chr3D 81.210 463 85 2 881 1342 593711469 593711008 2.850000e-99 372
18 TraesCS6B01G324500 chr3A 88.869 557 48 11 1341 1891 738080864 738081412 0.000000e+00 673
19 TraesCS6B01G324500 chr2B 88.829 555 50 11 1341 1891 53441077 53440531 0.000000e+00 671
20 TraesCS6B01G324500 chr2B 91.757 461 31 5 1890 2346 229592895 229592438 3.290000e-178 634
21 TraesCS6B01G324500 chr2B 73.711 1358 324 29 1 1342 751294003 751292663 1.250000e-137 499
22 TraesCS6B01G324500 chr5A 88.750 560 46 12 1341 1891 345238599 345239150 0.000000e+00 669
23 TraesCS6B01G324500 chr2A 88.612 562 49 13 1341 1892 603554558 603555114 0.000000e+00 669
24 TraesCS6B01G324500 chr2A 80.603 464 88 2 881 1343 48221871 48222333 7.970000e-95 357
25 TraesCS6B01G324500 chr1A 88.750 560 45 13 1341 1891 536655281 536655831 0.000000e+00 669
26 TraesCS6B01G324500 chrUn 73.414 1324 332 19 29 1342 307306767 307308080 5.870000e-131 477
27 TraesCS6B01G324500 chr4A 73.610 1277 294 36 88 1342 494000475 494001730 3.560000e-123 451


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G324500 chr6B 573740436 573742781 2345 True 4333 4333 100.000 1 2346 1 chr6B.!!$R4 2345
1 TraesCS6B01G324500 chr6B 478882888 478884224 1336 True 516 516 73.871 3 1342 1 chr6B.!!$R1 1339
2 TraesCS6B01G324500 chr3B 422192554 422193813 1259 False 1672 1672 90.600 78 1342 1 chr3B.!!$F1 1264
3 TraesCS6B01G324500 chr6D 467819798 467820345 547 True 697 697 89.748 1343 1891 1 chr6D.!!$R1 548
4 TraesCS6B01G324500 chr2D 324349902 324350449 547 False 691 691 89.568 1343 1891 1 chr2D.!!$F1 548
5 TraesCS6B01G324500 chr2D 478112730 478113276 546 False 691 691 89.568 1343 1891 1 chr2D.!!$F2 548
6 TraesCS6B01G324500 chr3D 332415839 332416390 551 False 675 675 88.829 1341 1891 1 chr3D.!!$F1 550
7 TraesCS6B01G324500 chr3A 738080864 738081412 548 False 673 673 88.869 1341 1891 1 chr3A.!!$F1 550
8 TraesCS6B01G324500 chr2B 53440531 53441077 546 True 671 671 88.829 1341 1891 1 chr2B.!!$R1 550
9 TraesCS6B01G324500 chr2B 751292663 751294003 1340 True 499 499 73.711 1 1342 1 chr2B.!!$R3 1341
10 TraesCS6B01G324500 chr5A 345238599 345239150 551 False 669 669 88.750 1341 1891 1 chr5A.!!$F1 550
11 TraesCS6B01G324500 chr2A 603554558 603555114 556 False 669 669 88.612 1341 1892 1 chr2A.!!$F2 551
12 TraesCS6B01G324500 chr1A 536655281 536655831 550 False 669 669 88.750 1341 1891 1 chr1A.!!$F1 550
13 TraesCS6B01G324500 chrUn 307306767 307308080 1313 False 477 477 73.414 29 1342 1 chrUn.!!$F1 1313
14 TraesCS6B01G324500 chr4A 494000475 494001730 1255 False 451 451 73.610 88 1342 1 chr4A.!!$F1 1254

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
540 544 0.042731 TCCCAGGGGACGATCTTCTT 59.957 55.0 5.33 0.0 39.76 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2260 2289 0.032678 CCGATCGGGTGATCCTTGAG 59.967 60.0 26.95 0.0 46.89 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.067582 CGGCCTATCACTCCGGAAC 59.932 63.158 5.23 0.00 39.52 3.62
52 53 7.931578 AATTGTCGTTTCAATTGGGTATCTA 57.068 32.000 5.42 0.00 43.50 1.98
58 59 6.311935 TCGTTTCAATTGGGTATCTAACTTCG 59.688 38.462 5.42 0.00 0.00 3.79
60 61 7.360607 CGTTTCAATTGGGTATCTAACTTCGTT 60.361 37.037 5.42 0.00 0.00 3.85
90 91 0.464036 GCACATGGAGGTATGGTCGA 59.536 55.000 0.00 0.00 32.32 4.20
149 150 9.349713 ACACATTCTGAAAATTAGAACCTTGTA 57.650 29.630 0.00 0.00 37.03 2.41
152 153 8.514594 CATTCTGAAAATTAGAACCTTGTAGCA 58.485 33.333 0.00 0.00 37.03 3.49
162 163 1.270147 ACCTTGTAGCACCAACGAGAC 60.270 52.381 0.00 0.00 31.02 3.36
183 184 2.363038 CGATTTCCTATCGTGGTACCCA 59.637 50.000 10.07 0.00 36.84 4.51
265 266 1.103987 TGCTTTTGCCAACGGTGCTA 61.104 50.000 0.00 0.00 46.87 3.49
309 310 4.153411 ACCGAGCTAGCTGGAACTATATT 58.847 43.478 28.87 10.09 0.00 1.28
320 321 5.008118 GCTGGAACTATATTTGGAAGTCTGC 59.992 44.000 0.00 0.00 0.00 4.26
347 348 8.606830 AGTTCCCTAGAAGATGAAAATTACTGT 58.393 33.333 0.00 0.00 30.91 3.55
382 383 2.765699 ACAGGAACTTTGGCAACACAAT 59.234 40.909 0.00 0.00 44.33 2.71
411 412 7.661437 TGCAAATCTTACAGACACTTATCAACT 59.339 33.333 0.00 0.00 0.00 3.16
417 418 5.000012 ACAGACACTTATCAACTCGATCC 58.000 43.478 0.00 0.00 35.39 3.36
429 430 1.067283 ACTCGATCCACTTGTCTGCTG 60.067 52.381 0.00 0.00 0.00 4.41
438 442 3.141398 CACTTGTCTGCTGTGTGGTATT 58.859 45.455 0.00 0.00 0.00 1.89
444 448 2.637382 TCTGCTGTGTGGTATTGAGGAA 59.363 45.455 0.00 0.00 0.00 3.36
540 544 0.042731 TCCCAGGGGACGATCTTCTT 59.957 55.000 5.33 0.00 39.76 2.52
560 564 8.556589 TCTTCTTATTTGTGATGGGAAGGAATA 58.443 33.333 0.00 0.00 32.34 1.75
680 684 2.267192 GAAGGAAGTTCCCCCAGTACT 58.733 52.381 18.65 0.00 37.19 2.73
693 697 0.377554 CAGTACTAGCCACCGTCGAG 59.622 60.000 0.00 0.00 0.00 4.04
756 763 7.168972 GGACGATTCTCAACTGAAGATATTCTG 59.831 40.741 5.52 5.52 0.00 3.02
757 764 6.983307 ACGATTCTCAACTGAAGATATTCTGG 59.017 38.462 11.08 2.78 0.00 3.86
777 784 3.075283 TGGAAGGGAAAATGCCTACTTCA 59.925 43.478 0.00 0.00 37.13 3.02
802 809 3.710722 CTCTGCCGGCTTGAGGGT 61.711 66.667 29.65 0.00 0.00 4.34
808 815 0.322187 GCCGGCTTGAGGGTAAAAGA 60.322 55.000 22.15 0.00 0.00 2.52
818 825 0.323957 GGGTAAAAGAGTCCTGCGGT 59.676 55.000 0.00 0.00 0.00 5.68
862 869 3.831715 GCATACTTGCTCTTTCGGTTT 57.168 42.857 0.00 0.00 45.77 3.27
863 870 3.748298 GCATACTTGCTCTTTCGGTTTC 58.252 45.455 0.00 0.00 45.77 2.78
879 886 4.703575 TCGGTTTCTAGATCCTTTCTTCGA 59.296 41.667 11.16 0.00 35.79 3.71
890 897 4.033709 TCCTTTCTTCGAGAGGATGGATT 58.966 43.478 0.00 0.00 37.91 3.01
916 923 1.352352 CTATGGGGATGGTGCTTAGGG 59.648 57.143 0.00 0.00 0.00 3.53
917 924 1.363530 ATGGGGATGGTGCTTAGGGG 61.364 60.000 0.00 0.00 0.00 4.79
918 925 1.696314 GGGGATGGTGCTTAGGGGA 60.696 63.158 0.00 0.00 0.00 4.81
944 951 1.690219 GGTGAGATCCTGATGGCCGT 61.690 60.000 0.00 0.00 0.00 5.68
948 955 1.620819 GAGATCCTGATGGCCGTGTAT 59.379 52.381 0.00 0.00 0.00 2.29
1049 1056 1.450312 CTGATCTTCCGGTGGTGGC 60.450 63.158 0.00 0.00 0.00 5.01
1062 1069 2.622011 GGTGGCGCAAACGGATTCA 61.622 57.895 10.83 0.00 40.57 2.57
1065 1072 1.064134 GGCGCAAACGGATTCATCC 59.936 57.895 10.83 0.00 43.65 3.51
1093 1100 5.560724 CTCTCTCCAGTTTAACAAATGGGA 58.439 41.667 0.00 0.00 33.45 4.37
1110 1117 0.033504 GGACACTTCTTCACTCGGCA 59.966 55.000 0.00 0.00 0.00 5.69
1112 1119 1.728971 GACACTTCTTCACTCGGCATG 59.271 52.381 0.00 0.00 0.00 4.06
1116 1123 0.396435 TTCTTCACTCGGCATGTGGT 59.604 50.000 6.96 0.00 36.21 4.16
1273 1280 2.355310 GGTTCGGTTCCACCATGTATCA 60.355 50.000 0.00 0.00 38.47 2.15
1316 1323 7.327275 CGACTGTAACTCTATTCCTATGCAATC 59.673 40.741 0.00 0.00 0.00 2.67
1363 1371 3.844211 ACTAAGATTACCACCAGGCTTCA 59.156 43.478 0.00 0.00 39.06 3.02
1364 1372 3.356529 AAGATTACCACCAGGCTTCAG 57.643 47.619 0.00 0.00 39.06 3.02
1639 1654 6.846870 ACAATGTATAAAATTGTTCGCGTG 57.153 33.333 5.77 0.00 43.94 5.34
1648 1663 2.392933 TTGTTCGCGTGGCTTAAAAG 57.607 45.000 5.77 0.00 0.00 2.27
1657 1672 3.285745 CGTGGCTTAAAAGTGTTTCGTC 58.714 45.455 0.00 0.00 0.00 4.20
1661 1676 3.549423 GGCTTAAAAGTGTTTCGTCCCAC 60.549 47.826 0.00 0.00 0.00 4.61
1670 1685 3.236604 TTCGTCCCACCCGAAAATC 57.763 52.632 0.00 0.00 40.97 2.17
1671 1686 0.671163 TTCGTCCCACCCGAAAATCG 60.671 55.000 0.00 0.00 40.97 3.34
1673 1688 0.952010 CGTCCCACCCGAAAATCGTT 60.952 55.000 0.00 0.00 38.40 3.85
1676 1691 2.160219 GTCCCACCCGAAAATCGTTAAC 59.840 50.000 0.00 0.00 38.40 2.01
1779 1803 9.862371 TTCTTTTAAATACTGCAAACAAAGACA 57.138 25.926 0.00 0.00 30.64 3.41
1900 1929 9.349713 TGTTTCAGTTCACATAAAAATCCTACT 57.650 29.630 0.00 0.00 0.00 2.57
1901 1930 9.612620 GTTTCAGTTCACATAAAAATCCTACTG 57.387 33.333 0.00 0.00 33.58 2.74
1902 1931 9.567776 TTTCAGTTCACATAAAAATCCTACTGA 57.432 29.630 0.00 0.00 38.08 3.41
1903 1932 8.777865 TCAGTTCACATAAAAATCCTACTGAG 57.222 34.615 0.00 0.00 35.78 3.35
1904 1933 8.375506 TCAGTTCACATAAAAATCCTACTGAGT 58.624 33.333 0.00 0.00 35.78 3.41
1905 1934 8.446273 CAGTTCACATAAAAATCCTACTGAGTG 58.554 37.037 0.00 0.00 34.02 3.51
1906 1935 7.607991 AGTTCACATAAAAATCCTACTGAGTGG 59.392 37.037 0.00 0.00 0.00 4.00
1907 1936 7.016153 TCACATAAAAATCCTACTGAGTGGT 57.984 36.000 0.00 0.00 0.00 4.16
1908 1937 6.878923 TCACATAAAAATCCTACTGAGTGGTG 59.121 38.462 0.00 0.00 0.00 4.17
1909 1938 6.878923 CACATAAAAATCCTACTGAGTGGTGA 59.121 38.462 0.00 0.00 0.00 4.02
1910 1939 7.065085 CACATAAAAATCCTACTGAGTGGTGAG 59.935 40.741 0.00 0.00 0.00 3.51
1911 1940 3.618690 AAATCCTACTGAGTGGTGAGC 57.381 47.619 0.00 0.00 0.00 4.26
1912 1941 2.238084 ATCCTACTGAGTGGTGAGCA 57.762 50.000 0.00 0.00 0.00 4.26
1913 1942 2.009681 TCCTACTGAGTGGTGAGCAA 57.990 50.000 0.00 0.00 0.00 3.91
1914 1943 2.325484 TCCTACTGAGTGGTGAGCAAA 58.675 47.619 0.00 0.00 0.00 3.68
1915 1944 2.037251 TCCTACTGAGTGGTGAGCAAAC 59.963 50.000 0.00 0.00 0.00 2.93
1916 1945 2.417719 CTACTGAGTGGTGAGCAAACC 58.582 52.381 0.00 0.96 40.94 3.27
1917 1946 0.839946 ACTGAGTGGTGAGCAAACCT 59.160 50.000 9.04 0.00 41.16 3.50
1918 1947 1.202698 ACTGAGTGGTGAGCAAACCTC 60.203 52.381 9.04 5.73 41.16 3.85
1919 1948 0.108585 TGAGTGGTGAGCAAACCTCC 59.891 55.000 9.04 0.91 41.16 4.30
1920 1949 0.606673 GAGTGGTGAGCAAACCTCCC 60.607 60.000 9.04 0.00 41.16 4.30
1921 1950 1.966451 GTGGTGAGCAAACCTCCCG 60.966 63.158 9.04 0.00 41.16 5.14
1922 1951 3.056328 GGTGAGCAAACCTCCCGC 61.056 66.667 0.72 0.00 39.98 6.13
1923 1952 2.032681 GTGAGCAAACCTCCCGCT 59.967 61.111 0.00 0.00 39.98 5.52
1925 1954 2.815647 GAGCAAACCTCCCGCTCG 60.816 66.667 0.00 0.00 42.42 5.03
1926 1955 4.394712 AGCAAACCTCCCGCTCGG 62.395 66.667 0.48 0.48 0.00 4.63
1937 1966 4.899239 CGCTCGGGGGCTTAGCTG 62.899 72.222 3.59 0.00 34.03 4.24
1939 1968 3.785859 CTCGGGGGCTTAGCTGCA 61.786 66.667 3.59 0.00 34.04 4.41
1940 1969 3.746949 CTCGGGGGCTTAGCTGCAG 62.747 68.421 10.11 10.11 34.04 4.41
1941 1970 4.101448 CGGGGGCTTAGCTGCAGT 62.101 66.667 16.64 4.79 34.04 4.40
1942 1971 2.124529 GGGGGCTTAGCTGCAGTC 60.125 66.667 16.64 7.83 34.04 3.51
1943 1972 2.674220 GGGGGCTTAGCTGCAGTCT 61.674 63.158 16.64 15.00 34.04 3.24
1944 1973 1.153269 GGGGCTTAGCTGCAGTCTC 60.153 63.158 16.64 0.00 34.04 3.36
1945 1974 1.520342 GGGCTTAGCTGCAGTCTCG 60.520 63.158 16.64 8.82 34.04 4.04
1946 1975 1.216710 GGCTTAGCTGCAGTCTCGT 59.783 57.895 16.64 0.00 34.04 4.18
1947 1976 0.456221 GGCTTAGCTGCAGTCTCGTA 59.544 55.000 16.64 2.27 34.04 3.43
1948 1977 1.551145 GCTTAGCTGCAGTCTCGTAC 58.449 55.000 16.64 0.00 0.00 3.67
1949 1978 1.133407 GCTTAGCTGCAGTCTCGTACT 59.867 52.381 16.64 4.24 39.81 2.73
1950 1979 2.793237 GCTTAGCTGCAGTCTCGTACTC 60.793 54.545 16.64 0.00 35.76 2.59
1951 1980 1.007580 TAGCTGCAGTCTCGTACTCG 58.992 55.000 16.64 0.00 35.76 4.18
1952 1981 1.870016 GCTGCAGTCTCGTACTCGC 60.870 63.158 16.64 0.00 35.76 5.03
1953 1982 1.226435 CTGCAGTCTCGTACTCGCC 60.226 63.158 5.25 0.00 35.76 5.54
1954 1983 1.649390 CTGCAGTCTCGTACTCGCCT 61.649 60.000 5.25 0.00 35.76 5.52
1955 1984 0.392060 TGCAGTCTCGTACTCGCCTA 60.392 55.000 0.00 0.00 35.76 3.93
1956 1985 0.731417 GCAGTCTCGTACTCGCCTAA 59.269 55.000 0.00 0.00 35.76 2.69
1957 1986 1.268133 GCAGTCTCGTACTCGCCTAAG 60.268 57.143 0.00 0.00 35.76 2.18
1958 1987 2.008329 CAGTCTCGTACTCGCCTAAGT 58.992 52.381 0.00 0.00 35.76 2.24
1959 1988 2.419324 CAGTCTCGTACTCGCCTAAGTT 59.581 50.000 0.00 0.00 35.76 2.66
1960 1989 3.080319 AGTCTCGTACTCGCCTAAGTTT 58.920 45.455 0.00 0.00 30.33 2.66
1961 1990 3.119919 AGTCTCGTACTCGCCTAAGTTTG 60.120 47.826 0.00 0.00 30.33 2.93
1962 1991 3.076621 TCTCGTACTCGCCTAAGTTTGA 58.923 45.455 0.00 0.00 36.96 2.69
1963 1992 3.503363 TCTCGTACTCGCCTAAGTTTGAA 59.497 43.478 0.00 0.00 36.96 2.69
1964 1993 4.022935 TCTCGTACTCGCCTAAGTTTGAAA 60.023 41.667 0.00 0.00 36.96 2.69
1965 1994 4.619973 TCGTACTCGCCTAAGTTTGAAAA 58.380 39.130 0.00 0.00 36.96 2.29
1966 1995 5.049167 TCGTACTCGCCTAAGTTTGAAAAA 58.951 37.500 0.00 0.00 36.96 1.94
1984 2013 4.473477 AAAAATCCTACCGAGTGGAGAG 57.527 45.455 0.00 0.00 39.21 3.20
1985 2014 1.404843 AATCCTACCGAGTGGAGAGC 58.595 55.000 0.00 0.00 39.21 4.09
1986 2015 0.259065 ATCCTACCGAGTGGAGAGCA 59.741 55.000 0.00 0.00 39.21 4.26
1987 2016 0.039180 TCCTACCGAGTGGAGAGCAA 59.961 55.000 0.00 0.00 39.21 3.91
1988 2017 1.115467 CCTACCGAGTGGAGAGCAAT 58.885 55.000 0.00 0.00 39.21 3.56
1989 2018 1.067821 CCTACCGAGTGGAGAGCAATC 59.932 57.143 0.00 0.00 39.21 2.67
1990 2019 1.067821 CTACCGAGTGGAGAGCAATCC 59.932 57.143 0.35 0.35 39.21 3.01
1991 2020 0.616111 ACCGAGTGGAGAGCAATCCT 60.616 55.000 8.51 0.00 40.29 3.24
1992 2021 0.103937 CCGAGTGGAGAGCAATCCTC 59.896 60.000 8.51 5.21 40.29 3.71
1997 2026 2.521142 GTGGAGAGCAATCCTCCCACT 61.521 57.143 16.72 0.00 46.90 4.00
1998 2027 0.467804 GGAGAGCAATCCTCCCACTC 59.532 60.000 0.00 0.00 43.37 3.51
1999 2028 0.103937 GAGAGCAATCCTCCCACTCG 59.896 60.000 0.00 0.00 41.74 4.18
2000 2029 0.324738 AGAGCAATCCTCCCACTCGA 60.325 55.000 0.00 0.00 41.74 4.04
2001 2030 0.103937 GAGCAATCCTCCCACTCGAG 59.896 60.000 11.84 11.84 34.35 4.04
2009 2038 2.365105 CCCACTCGAGGGGGCTTA 60.365 66.667 39.16 0.00 45.60 3.09
2010 2039 2.435693 CCCACTCGAGGGGGCTTAG 61.436 68.421 39.16 16.36 45.60 2.18
2011 2040 2.501610 CACTCGAGGGGGCTTAGC 59.498 66.667 18.41 0.00 0.00 3.09
2012 2041 2.060980 CACTCGAGGGGGCTTAGCT 61.061 63.158 18.41 0.00 0.00 3.32
2013 2042 0.755698 CACTCGAGGGGGCTTAGCTA 60.756 60.000 18.41 0.00 0.00 3.32
2014 2043 0.756070 ACTCGAGGGGGCTTAGCTAC 60.756 60.000 18.41 0.00 0.00 3.58
2015 2044 0.755698 CTCGAGGGGGCTTAGCTACA 60.756 60.000 3.91 0.00 0.00 2.74
2016 2045 0.755698 TCGAGGGGGCTTAGCTACAG 60.756 60.000 3.59 0.00 0.00 2.74
2017 2046 1.043673 CGAGGGGGCTTAGCTACAGT 61.044 60.000 3.59 0.00 0.00 3.55
2018 2047 0.753867 GAGGGGGCTTAGCTACAGTC 59.246 60.000 3.59 0.00 0.00 3.51
2019 2048 0.691413 AGGGGGCTTAGCTACAGTCC 60.691 60.000 14.60 14.60 35.00 3.85
2021 2050 1.442148 GGGCTTAGCTACAGTCCCG 59.558 63.158 12.83 0.00 28.63 5.14
2022 2051 1.328430 GGGCTTAGCTACAGTCCCGT 61.328 60.000 12.83 0.00 28.63 5.28
2023 2052 1.396653 GGCTTAGCTACAGTCCCGTA 58.603 55.000 3.59 0.00 0.00 4.02
2024 2053 1.066757 GGCTTAGCTACAGTCCCGTAC 59.933 57.143 3.59 0.00 0.00 3.67
2025 2054 2.022934 GCTTAGCTACAGTCCCGTACT 58.977 52.381 0.00 0.00 39.81 2.73
2026 2055 2.033174 GCTTAGCTACAGTCCCGTACTC 59.967 54.545 0.00 0.00 35.76 2.59
2027 2056 1.945387 TAGCTACAGTCCCGTACTCG 58.055 55.000 0.00 0.00 35.76 4.18
2028 2057 1.063811 GCTACAGTCCCGTACTCGC 59.936 63.158 0.00 0.00 35.76 5.03
2029 2058 1.726265 CTACAGTCCCGTACTCGCC 59.274 63.158 0.00 0.00 35.76 5.54
2030 2059 0.747283 CTACAGTCCCGTACTCGCCT 60.747 60.000 0.00 0.00 35.76 5.52
2031 2060 0.541392 TACAGTCCCGTACTCGCCTA 59.459 55.000 0.00 0.00 35.76 3.93
2032 2061 0.322816 ACAGTCCCGTACTCGCCTAA 60.323 55.000 0.00 0.00 35.76 2.69
2033 2062 0.381089 CAGTCCCGTACTCGCCTAAG 59.619 60.000 0.00 0.00 35.76 2.18
2034 2063 0.034670 AGTCCCGTACTCGCCTAAGT 60.035 55.000 0.00 0.00 30.33 2.24
2035 2064 0.813821 GTCCCGTACTCGCCTAAGTT 59.186 55.000 0.00 0.00 35.54 2.66
2036 2065 1.203287 GTCCCGTACTCGCCTAAGTTT 59.797 52.381 0.00 0.00 35.54 2.66
2037 2066 1.203052 TCCCGTACTCGCCTAAGTTTG 59.797 52.381 0.00 0.00 35.54 2.93
2038 2067 1.203052 CCCGTACTCGCCTAAGTTTGA 59.797 52.381 0.00 0.00 35.54 2.69
2039 2068 2.353011 CCCGTACTCGCCTAAGTTTGAA 60.353 50.000 0.00 0.00 35.54 2.69
2040 2069 3.319755 CCGTACTCGCCTAAGTTTGAAA 58.680 45.455 0.00 0.00 35.54 2.69
2041 2070 3.742369 CCGTACTCGCCTAAGTTTGAAAA 59.258 43.478 0.00 0.00 35.54 2.29
2042 2071 4.211794 CCGTACTCGCCTAAGTTTGAAAAA 59.788 41.667 0.00 0.00 35.54 1.94
2043 2072 5.106830 CCGTACTCGCCTAAGTTTGAAAAAT 60.107 40.000 0.00 0.00 35.54 1.82
2044 2073 6.013689 CGTACTCGCCTAAGTTTGAAAAATC 58.986 40.000 0.00 0.00 0.00 2.17
2045 2074 5.372547 ACTCGCCTAAGTTTGAAAAATCC 57.627 39.130 0.00 0.00 0.00 3.01
2046 2075 5.070685 ACTCGCCTAAGTTTGAAAAATCCT 58.929 37.500 0.00 0.00 0.00 3.24
2047 2076 6.235664 ACTCGCCTAAGTTTGAAAAATCCTA 58.764 36.000 0.00 0.00 0.00 2.94
2048 2077 6.148976 ACTCGCCTAAGTTTGAAAAATCCTAC 59.851 38.462 0.00 0.00 0.00 3.18
2049 2078 5.413523 TCGCCTAAGTTTGAAAAATCCTACC 59.586 40.000 0.00 0.00 0.00 3.18
2050 2079 5.637809 GCCTAAGTTTGAAAAATCCTACCG 58.362 41.667 0.00 0.00 0.00 4.02
2051 2080 5.413523 GCCTAAGTTTGAAAAATCCTACCGA 59.586 40.000 0.00 0.00 0.00 4.69
2052 2081 6.403309 GCCTAAGTTTGAAAAATCCTACCGAG 60.403 42.308 0.00 0.00 0.00 4.63
2053 2082 6.653740 CCTAAGTTTGAAAAATCCTACCGAGT 59.346 38.462 0.00 0.00 0.00 4.18
2054 2083 5.941948 AGTTTGAAAAATCCTACCGAGTG 57.058 39.130 0.00 0.00 0.00 3.51
2055 2084 4.760204 AGTTTGAAAAATCCTACCGAGTGG 59.240 41.667 0.00 0.00 42.84 4.00
2065 2094 3.655481 CCGAGTGGTGAGCAAACC 58.345 61.111 0.96 0.96 40.94 3.27
2066 2095 1.071471 CCGAGTGGTGAGCAAACCT 59.929 57.895 9.04 0.00 41.16 3.50
2067 2096 0.951040 CCGAGTGGTGAGCAAACCTC 60.951 60.000 9.04 5.73 41.16 3.85
2068 2097 0.951040 CGAGTGGTGAGCAAACCTCC 60.951 60.000 9.04 0.91 41.16 4.30
2069 2098 0.606673 GAGTGGTGAGCAAACCTCCC 60.607 60.000 9.04 0.00 41.16 4.30
2070 2099 1.150536 GTGGTGAGCAAACCTCCCA 59.849 57.895 9.04 0.00 41.16 4.37
2071 2100 1.150536 TGGTGAGCAAACCTCCCAC 59.849 57.895 9.04 0.00 41.16 4.61
2072 2101 1.352622 TGGTGAGCAAACCTCCCACT 61.353 55.000 9.04 0.00 41.16 4.00
2073 2102 0.606673 GGTGAGCAAACCTCCCACTC 60.607 60.000 0.72 0.00 39.98 3.51
2074 2103 0.951040 GTGAGCAAACCTCCCACTCG 60.951 60.000 0.00 0.00 39.98 4.18
2075 2104 1.376037 GAGCAAACCTCCCACTCGG 60.376 63.158 0.00 0.00 34.35 4.63
2076 2105 1.827399 GAGCAAACCTCCCACTCGGA 61.827 60.000 0.00 0.00 38.83 4.55
2083 2112 4.356979 TCCCACTCGGAGGCTTAG 57.643 61.111 10.23 0.00 34.86 2.18
2084 2113 2.058595 TCCCACTCGGAGGCTTAGC 61.059 63.158 10.23 0.00 34.86 3.09
2085 2114 2.060980 CCCACTCGGAGGCTTAGCT 61.061 63.158 10.23 0.00 0.00 3.32
2086 2115 1.142748 CCACTCGGAGGCTTAGCTG 59.857 63.158 10.23 0.00 0.00 4.24
2087 2116 1.520342 CACTCGGAGGCTTAGCTGC 60.520 63.158 10.23 0.00 0.00 5.25
2088 2117 1.984570 ACTCGGAGGCTTAGCTGCA 60.985 57.895 10.23 0.00 34.04 4.41
2089 2118 1.227205 CTCGGAGGCTTAGCTGCAG 60.227 63.158 10.11 10.11 34.04 4.41
2090 2119 1.954362 CTCGGAGGCTTAGCTGCAGT 61.954 60.000 16.64 4.79 34.04 4.40
2091 2120 1.520342 CGGAGGCTTAGCTGCAGTC 60.520 63.158 16.64 7.83 34.04 3.51
2092 2121 1.904032 GGAGGCTTAGCTGCAGTCT 59.096 57.895 16.64 15.00 34.04 3.24
2093 2122 0.179086 GGAGGCTTAGCTGCAGTCTC 60.179 60.000 16.64 17.19 41.56 3.36
2094 2123 0.534412 GAGGCTTAGCTGCAGTCTCA 59.466 55.000 19.47 3.87 41.84 3.27
2095 2124 1.138661 GAGGCTTAGCTGCAGTCTCAT 59.861 52.381 19.47 0.00 41.84 2.90
2096 2125 2.363680 GAGGCTTAGCTGCAGTCTCATA 59.636 50.000 19.47 0.00 41.84 2.15
2097 2126 2.102252 AGGCTTAGCTGCAGTCTCATAC 59.898 50.000 16.64 1.01 34.04 2.39
2098 2127 2.102252 GGCTTAGCTGCAGTCTCATACT 59.898 50.000 16.64 4.24 39.81 2.12
2099 2128 3.380142 GCTTAGCTGCAGTCTCATACTC 58.620 50.000 16.64 0.00 35.76 2.59
2100 2129 3.626977 CTTAGCTGCAGTCTCATACTCG 58.373 50.000 16.64 0.00 35.76 4.18
2101 2130 0.102120 AGCTGCAGTCTCATACTCGC 59.898 55.000 16.64 0.00 35.76 5.03
2102 2131 0.873743 GCTGCAGTCTCATACTCGCC 60.874 60.000 16.64 0.00 35.76 5.54
2103 2132 0.743688 CTGCAGTCTCATACTCGCCT 59.256 55.000 5.25 0.00 35.76 5.52
2104 2133 1.950216 CTGCAGTCTCATACTCGCCTA 59.050 52.381 5.25 0.00 35.76 3.93
2105 2134 2.359214 CTGCAGTCTCATACTCGCCTAA 59.641 50.000 5.25 0.00 35.76 2.69
2106 2135 2.359214 TGCAGTCTCATACTCGCCTAAG 59.641 50.000 0.00 0.00 35.76 2.18
2107 2136 2.359531 GCAGTCTCATACTCGCCTAAGT 59.640 50.000 0.00 0.00 35.76 2.24
2108 2137 3.181485 GCAGTCTCATACTCGCCTAAGTT 60.181 47.826 0.00 0.00 35.76 2.66
2109 2138 4.678309 GCAGTCTCATACTCGCCTAAGTTT 60.678 45.833 0.00 0.00 35.76 2.66
2110 2139 4.800993 CAGTCTCATACTCGCCTAAGTTTG 59.199 45.833 0.00 0.00 35.76 2.93
2111 2140 4.113354 GTCTCATACTCGCCTAAGTTTGG 58.887 47.826 0.00 0.00 31.51 3.28
2112 2141 4.021229 TCTCATACTCGCCTAAGTTTGGA 58.979 43.478 7.60 0.00 31.51 3.53
2113 2142 4.464951 TCTCATACTCGCCTAAGTTTGGAA 59.535 41.667 7.60 0.00 31.51 3.53
2114 2143 5.046878 TCTCATACTCGCCTAAGTTTGGAAA 60.047 40.000 7.60 0.00 31.51 3.13
2115 2144 5.553123 TCATACTCGCCTAAGTTTGGAAAA 58.447 37.500 7.60 0.00 31.51 2.29
2116 2145 5.998981 TCATACTCGCCTAAGTTTGGAAAAA 59.001 36.000 7.60 0.00 31.51 1.94
2117 2146 6.657541 TCATACTCGCCTAAGTTTGGAAAAAT 59.342 34.615 7.60 0.00 31.51 1.82
2118 2147 5.372547 ACTCGCCTAAGTTTGGAAAAATC 57.627 39.130 7.60 0.00 0.00 2.17
2119 2148 4.217767 ACTCGCCTAAGTTTGGAAAAATCC 59.782 41.667 7.60 0.00 0.00 3.01
2120 2149 4.403734 TCGCCTAAGTTTGGAAAAATCCT 58.596 39.130 7.60 0.00 0.00 3.24
2121 2150 5.562635 TCGCCTAAGTTTGGAAAAATCCTA 58.437 37.500 7.60 0.00 0.00 2.94
2122 2151 5.413523 TCGCCTAAGTTTGGAAAAATCCTAC 59.586 40.000 7.60 0.00 0.00 3.18
2123 2152 5.392703 CGCCTAAGTTTGGAAAAATCCTACC 60.393 44.000 7.60 0.00 0.00 3.18
2124 2153 5.392703 GCCTAAGTTTGGAAAAATCCTACCG 60.393 44.000 7.60 0.00 0.00 4.02
2125 2154 5.941647 CCTAAGTTTGGAAAAATCCTACCGA 59.058 40.000 0.00 0.00 0.00 4.69
2126 2155 5.959618 AAGTTTGGAAAAATCCTACCGAG 57.040 39.130 0.00 0.00 0.00 4.63
2127 2156 4.981812 AGTTTGGAAAAATCCTACCGAGT 58.018 39.130 0.00 0.00 0.00 4.18
2128 2157 4.760204 AGTTTGGAAAAATCCTACCGAGTG 59.240 41.667 0.00 0.00 0.00 3.51
2129 2158 3.343941 TGGAAAAATCCTACCGAGTGG 57.656 47.619 0.00 0.00 42.84 4.00
2130 2159 2.907696 TGGAAAAATCCTACCGAGTGGA 59.092 45.455 0.00 0.00 39.21 4.02
2131 2160 3.055385 TGGAAAAATCCTACCGAGTGGAG 60.055 47.826 0.00 0.00 39.21 3.86
2132 2161 3.197116 GGAAAAATCCTACCGAGTGGAGA 59.803 47.826 0.00 0.00 39.21 3.71
2133 2162 4.434520 GAAAAATCCTACCGAGTGGAGAG 58.565 47.826 0.00 0.00 39.21 3.20
2134 2163 1.404843 AATCCTACCGAGTGGAGAGC 58.595 55.000 0.00 0.00 39.21 4.09
2135 2164 0.820074 ATCCTACCGAGTGGAGAGCG 60.820 60.000 0.00 0.00 39.21 5.03
2136 2165 1.451567 CCTACCGAGTGGAGAGCGA 60.452 63.158 0.00 0.00 39.21 4.93
2137 2166 0.820074 CCTACCGAGTGGAGAGCGAT 60.820 60.000 0.00 0.00 39.21 4.58
2138 2167 0.589223 CTACCGAGTGGAGAGCGATC 59.411 60.000 0.00 0.00 39.21 3.69
2139 2168 0.818445 TACCGAGTGGAGAGCGATCC 60.818 60.000 0.00 3.46 39.21 3.36
2140 2169 1.826054 CCGAGTGGAGAGCGATCCT 60.826 63.158 11.00 0.00 40.29 3.24
2141 2170 1.652012 CGAGTGGAGAGCGATCCTC 59.348 63.158 11.00 7.76 40.29 3.71
2145 2174 3.133946 GGAGAGCGATCCTCCCAC 58.866 66.667 0.00 0.82 43.37 4.61
2146 2175 1.456705 GGAGAGCGATCCTCCCACT 60.457 63.158 0.00 0.00 43.37 4.00
2147 2176 1.460273 GGAGAGCGATCCTCCCACTC 61.460 65.000 0.00 0.00 43.37 3.51
2148 2177 1.791103 GAGAGCGATCCTCCCACTCG 61.791 65.000 0.00 0.00 41.74 4.18
2149 2178 2.835431 AGCGATCCTCCCACTCGG 60.835 66.667 0.00 0.00 33.17 4.63
2159 2188 3.400188 CCACTCGGGGGCTTAGTT 58.600 61.111 0.00 0.00 0.00 2.24
2160 2189 1.078426 CCACTCGGGGGCTTAGTTG 60.078 63.158 0.00 0.00 0.00 3.16
2161 2190 1.745489 CACTCGGGGGCTTAGTTGC 60.745 63.158 0.00 0.00 0.00 4.17
2162 2191 2.221299 ACTCGGGGGCTTAGTTGCA 61.221 57.895 0.00 0.00 34.04 4.08
2163 2192 1.450312 CTCGGGGGCTTAGTTGCAG 60.450 63.158 0.00 0.00 34.04 4.41
2164 2193 2.185310 CTCGGGGGCTTAGTTGCAGT 62.185 60.000 0.00 0.00 34.04 4.40
2165 2194 1.745489 CGGGGGCTTAGTTGCAGTC 60.745 63.158 0.00 0.00 34.04 3.51
2166 2195 1.378646 GGGGGCTTAGTTGCAGTCC 60.379 63.158 0.00 0.00 35.00 3.85
2167 2196 4.320910 GGGCTTAGTTGCAGTCCC 57.679 61.111 0.00 0.00 28.63 4.46
2168 2197 1.378762 GGGCTTAGTTGCAGTCCCA 59.621 57.895 0.00 0.00 34.01 4.37
2169 2198 0.034089 GGGCTTAGTTGCAGTCCCAT 60.034 55.000 0.00 0.00 34.01 4.00
2170 2199 1.098050 GGCTTAGTTGCAGTCCCATG 58.902 55.000 0.00 0.00 34.04 3.66
2171 2200 0.453390 GCTTAGTTGCAGTCCCATGC 59.547 55.000 0.00 0.00 46.68 4.06
2172 2201 1.952367 GCTTAGTTGCAGTCCCATGCT 60.952 52.381 0.00 0.00 46.63 3.79
2173 2202 2.012673 CTTAGTTGCAGTCCCATGCTC 58.987 52.381 0.00 0.00 46.63 4.26
2174 2203 0.108186 TAGTTGCAGTCCCATGCTCG 60.108 55.000 0.00 0.00 46.63 5.03
2175 2204 2.747460 TTGCAGTCCCATGCTCGC 60.747 61.111 0.00 0.00 46.63 5.03
2176 2205 4.783621 TGCAGTCCCATGCTCGCC 62.784 66.667 0.00 0.00 46.63 5.54
2177 2206 4.479993 GCAGTCCCATGCTCGCCT 62.480 66.667 0.00 0.00 43.07 5.52
2178 2207 3.094062 GCAGTCCCATGCTCGCCTA 62.094 63.158 0.00 0.00 43.07 3.93
2179 2208 1.522092 CAGTCCCATGCTCGCCTAA 59.478 57.895 0.00 0.00 0.00 2.69
2180 2209 0.531532 CAGTCCCATGCTCGCCTAAG 60.532 60.000 0.00 0.00 0.00 2.18
2181 2210 0.978146 AGTCCCATGCTCGCCTAAGT 60.978 55.000 0.00 0.00 0.00 2.24
2182 2211 0.107654 GTCCCATGCTCGCCTAAGTT 60.108 55.000 0.00 0.00 0.00 2.66
2183 2212 0.618458 TCCCATGCTCGCCTAAGTTT 59.382 50.000 0.00 0.00 0.00 2.66
2184 2213 0.734889 CCCATGCTCGCCTAAGTTTG 59.265 55.000 0.00 0.00 0.00 2.93
2185 2214 0.734889 CCATGCTCGCCTAAGTTTGG 59.265 55.000 0.00 0.00 0.00 3.28
2186 2215 1.678728 CCATGCTCGCCTAAGTTTGGA 60.679 52.381 7.60 0.00 0.00 3.53
2187 2216 2.083774 CATGCTCGCCTAAGTTTGGAA 58.916 47.619 7.60 0.00 0.00 3.53
2188 2217 2.264005 TGCTCGCCTAAGTTTGGAAA 57.736 45.000 7.60 0.00 0.00 3.13
2189 2218 2.577700 TGCTCGCCTAAGTTTGGAAAA 58.422 42.857 7.60 0.00 0.00 2.29
2190 2219 2.292292 TGCTCGCCTAAGTTTGGAAAAC 59.708 45.455 7.60 0.00 0.00 2.43
2191 2220 2.351447 GCTCGCCTAAGTTTGGAAAACC 60.351 50.000 7.60 0.00 0.00 3.27
2192 2221 3.146847 CTCGCCTAAGTTTGGAAAACCT 58.853 45.455 7.60 0.00 0.00 3.50
2193 2222 3.558033 TCGCCTAAGTTTGGAAAACCTT 58.442 40.909 7.60 0.00 0.00 3.50
2194 2223 4.716794 TCGCCTAAGTTTGGAAAACCTTA 58.283 39.130 7.60 0.00 0.00 2.69
2195 2224 4.516321 TCGCCTAAGTTTGGAAAACCTTAC 59.484 41.667 7.60 0.00 0.00 2.34
2196 2225 4.320714 CGCCTAAGTTTGGAAAACCTTACC 60.321 45.833 7.60 0.00 0.00 2.85
2197 2226 4.320714 GCCTAAGTTTGGAAAACCTTACCG 60.321 45.833 7.60 0.00 0.00 4.02
2198 2227 4.216902 CCTAAGTTTGGAAAACCTTACCGG 59.783 45.833 0.00 0.00 39.35 5.28
2199 2228 2.589720 AGTTTGGAAAACCTTACCGGG 58.410 47.619 6.32 0.00 36.97 5.73
2200 2229 2.091720 AGTTTGGAAAACCTTACCGGGT 60.092 45.455 6.32 4.46 42.05 5.28
2201 2230 1.984066 TTGGAAAACCTTACCGGGTG 58.016 50.000 10.66 0.00 39.85 4.61
2202 2231 0.110869 TGGAAAACCTTACCGGGTGG 59.889 55.000 10.66 5.91 39.85 4.61
2212 2241 4.889807 CCGGGTGGTTGACAGAAA 57.110 55.556 0.00 0.00 0.00 2.52
2213 2242 2.327228 CCGGGTGGTTGACAGAAAC 58.673 57.895 0.00 0.00 0.00 2.78
2214 2243 1.503818 CCGGGTGGTTGACAGAAACG 61.504 60.000 0.00 0.00 0.00 3.60
2215 2244 0.812412 CGGGTGGTTGACAGAAACGT 60.812 55.000 0.00 0.00 0.00 3.99
2216 2245 0.942252 GGGTGGTTGACAGAAACGTC 59.058 55.000 0.00 0.00 36.40 4.34
2217 2246 1.658994 GGTGGTTGACAGAAACGTCA 58.341 50.000 0.00 0.00 44.05 4.35
2222 2251 3.000815 TGACAGAAACGTCAAGGCC 57.999 52.632 0.00 0.00 42.82 5.19
2223 2252 0.179234 TGACAGAAACGTCAAGGCCA 59.821 50.000 5.01 0.00 42.82 5.36
2224 2253 1.202758 TGACAGAAACGTCAAGGCCAT 60.203 47.619 5.01 0.00 42.82 4.40
2225 2254 1.880027 GACAGAAACGTCAAGGCCATT 59.120 47.619 5.01 0.00 35.88 3.16
2226 2255 1.608590 ACAGAAACGTCAAGGCCATTG 59.391 47.619 5.01 7.08 40.52 2.82
2227 2256 0.598065 AGAAACGTCAAGGCCATTGC 59.402 50.000 5.01 2.87 38.89 3.56
2228 2257 0.729140 GAAACGTCAAGGCCATTGCG 60.729 55.000 5.01 15.52 41.27 4.85
2229 2258 2.141122 AAACGTCAAGGCCATTGCGG 62.141 55.000 22.13 14.27 40.44 5.69
2230 2259 2.745884 CGTCAAGGCCATTGCGGA 60.746 61.111 5.01 0.00 38.89 5.54
2231 2260 2.753966 CGTCAAGGCCATTGCGGAG 61.754 63.158 5.01 0.00 38.89 4.63
2232 2261 1.675641 GTCAAGGCCATTGCGGAGT 60.676 57.895 5.01 0.00 38.89 3.85
2233 2262 1.675310 TCAAGGCCATTGCGGAGTG 60.675 57.895 5.01 0.00 38.89 3.51
2234 2263 3.064324 AAGGCCATTGCGGAGTGC 61.064 61.111 5.01 0.00 46.70 4.40
2237 2266 3.064324 GCCATTGCGGAGTGCCTT 61.064 61.111 0.00 0.00 45.60 4.35
2238 2267 2.879907 CCATTGCGGAGTGCCTTG 59.120 61.111 0.00 0.00 45.60 3.61
2239 2268 2.180017 CATTGCGGAGTGCCTTGC 59.820 61.111 0.00 0.00 45.60 4.01
2240 2269 2.034687 ATTGCGGAGTGCCTTGCT 59.965 55.556 0.00 0.00 45.60 3.91
2241 2270 2.338015 ATTGCGGAGTGCCTTGCTG 61.338 57.895 0.00 0.00 45.60 4.41
2242 2271 2.753009 ATTGCGGAGTGCCTTGCTGA 62.753 55.000 0.00 0.00 45.60 4.26
2243 2272 2.437359 GCGGAGTGCCTTGCTGAT 60.437 61.111 0.00 0.00 37.76 2.90
2244 2273 2.758089 GCGGAGTGCCTTGCTGATG 61.758 63.158 0.00 0.00 37.76 3.07
2245 2274 1.078918 CGGAGTGCCTTGCTGATGA 60.079 57.895 0.00 0.00 0.00 2.92
2246 2275 1.088340 CGGAGTGCCTTGCTGATGAG 61.088 60.000 0.00 0.00 0.00 2.90
2247 2276 1.375098 GGAGTGCCTTGCTGATGAGC 61.375 60.000 0.00 0.00 46.44 4.26
2248 2277 0.392729 GAGTGCCTTGCTGATGAGCT 60.393 55.000 5.57 0.00 46.39 4.09
2249 2278 0.677098 AGTGCCTTGCTGATGAGCTG 60.677 55.000 5.57 0.00 46.39 4.24
2250 2279 0.675837 GTGCCTTGCTGATGAGCTGA 60.676 55.000 5.57 0.00 46.39 4.26
2251 2280 0.255033 TGCCTTGCTGATGAGCTGAT 59.745 50.000 5.57 0.00 46.39 2.90
2252 2281 0.945813 GCCTTGCTGATGAGCTGATC 59.054 55.000 6.18 6.18 46.39 2.92
2253 2282 1.746171 GCCTTGCTGATGAGCTGATCA 60.746 52.381 15.39 15.39 46.39 2.92
2254 2283 2.640184 CCTTGCTGATGAGCTGATCAA 58.360 47.619 16.88 0.17 46.39 2.57
2255 2284 3.215151 CCTTGCTGATGAGCTGATCAAT 58.785 45.455 16.88 0.00 46.39 2.57
2256 2285 3.003793 CCTTGCTGATGAGCTGATCAATG 59.996 47.826 16.88 7.60 46.39 2.82
2257 2286 1.947456 TGCTGATGAGCTGATCAATGC 59.053 47.619 16.88 16.92 46.39 3.56
2258 2287 2.222886 GCTGATGAGCTGATCAATGCT 58.777 47.619 16.88 9.08 42.53 3.79
2259 2288 3.181458 TGCTGATGAGCTGATCAATGCTA 60.181 43.478 21.86 10.42 46.39 3.49
2260 2289 3.186817 GCTGATGAGCTGATCAATGCTAC 59.813 47.826 16.88 5.67 42.53 3.58
2261 2290 4.633175 CTGATGAGCTGATCAATGCTACT 58.367 43.478 16.88 0.80 42.53 2.57
2262 2291 4.629092 TGATGAGCTGATCAATGCTACTC 58.371 43.478 13.88 9.44 42.53 2.59
2263 2292 4.100498 TGATGAGCTGATCAATGCTACTCA 59.900 41.667 13.88 11.49 42.53 3.41
2264 2293 4.476628 TGAGCTGATCAATGCTACTCAA 57.523 40.909 9.28 0.00 39.91 3.02
2265 2294 4.439968 TGAGCTGATCAATGCTACTCAAG 58.560 43.478 9.28 0.00 39.91 3.02
2266 2295 3.806380 AGCTGATCAATGCTACTCAAGG 58.194 45.455 7.64 0.00 37.81 3.61
2267 2296 3.453717 AGCTGATCAATGCTACTCAAGGA 59.546 43.478 7.64 0.00 37.81 3.36
2268 2297 4.102838 AGCTGATCAATGCTACTCAAGGAT 59.897 41.667 7.64 0.00 38.00 3.24
2269 2298 4.451774 GCTGATCAATGCTACTCAAGGATC 59.548 45.833 0.00 0.00 34.73 3.36
2270 2299 5.608449 CTGATCAATGCTACTCAAGGATCA 58.392 41.667 0.00 0.00 41.68 2.92
2271 2300 5.363101 TGATCAATGCTACTCAAGGATCAC 58.637 41.667 0.00 0.00 40.37 3.06
2272 2301 4.142609 TCAATGCTACTCAAGGATCACC 57.857 45.455 0.00 0.00 34.73 4.02
2273 2302 3.118261 TCAATGCTACTCAAGGATCACCC 60.118 47.826 0.00 0.00 34.73 4.61
2274 2303 0.824109 TGCTACTCAAGGATCACCCG 59.176 55.000 0.00 0.00 40.87 5.28
2275 2304 1.112113 GCTACTCAAGGATCACCCGA 58.888 55.000 0.00 0.00 40.87 5.14
2276 2305 1.689273 GCTACTCAAGGATCACCCGAT 59.311 52.381 0.00 0.00 40.87 4.18
2277 2306 2.288518 GCTACTCAAGGATCACCCGATC 60.289 54.545 0.00 0.00 46.34 3.69
2281 2310 0.249489 CAAGGATCACCCGATCGGTC 60.249 60.000 31.22 21.58 43.58 4.79
2282 2311 1.735376 AAGGATCACCCGATCGGTCG 61.735 60.000 31.22 21.53 43.58 4.79
2292 2321 3.396491 GATCGGTCGACTGAAACGT 57.604 52.632 29.65 14.36 34.49 3.99
2293 2322 1.257539 GATCGGTCGACTGAAACGTC 58.742 55.000 29.65 18.82 34.49 4.34
2294 2323 0.594602 ATCGGTCGACTGAAACGTCA 59.405 50.000 29.65 6.66 34.49 4.35
2295 2324 0.381445 TCGGTCGACTGAAACGTCAA 59.619 50.000 24.58 0.00 33.54 3.18
2296 2325 0.776451 CGGTCGACTGAAACGTCAAG 59.224 55.000 20.01 0.00 33.54 3.02
2297 2326 1.598676 CGGTCGACTGAAACGTCAAGA 60.599 52.381 20.01 0.00 33.54 3.02
2298 2327 1.785430 GGTCGACTGAAACGTCAAGAC 59.215 52.381 16.46 0.00 34.54 3.01
2299 2328 1.785430 GTCGACTGAAACGTCAAGACC 59.215 52.381 8.70 0.00 33.54 3.85
2300 2329 1.406180 TCGACTGAAACGTCAAGACCA 59.594 47.619 0.00 0.00 33.54 4.02
2301 2330 2.035449 TCGACTGAAACGTCAAGACCAT 59.965 45.455 0.00 0.00 33.54 3.55
2302 2331 2.800544 CGACTGAAACGTCAAGACCATT 59.199 45.455 0.00 0.00 33.54 3.16
2303 2332 3.985279 CGACTGAAACGTCAAGACCATTA 59.015 43.478 0.00 0.00 33.54 1.90
2304 2333 4.143389 CGACTGAAACGTCAAGACCATTAC 60.143 45.833 0.00 0.00 33.54 1.89
2305 2334 4.957296 ACTGAAACGTCAAGACCATTACT 58.043 39.130 0.00 0.00 31.88 2.24
2306 2335 4.750098 ACTGAAACGTCAAGACCATTACTG 59.250 41.667 0.00 0.00 31.88 2.74
2307 2336 4.951254 TGAAACGTCAAGACCATTACTGA 58.049 39.130 0.00 0.00 0.00 3.41
2308 2337 4.988540 TGAAACGTCAAGACCATTACTGAG 59.011 41.667 0.00 0.00 0.00 3.35
2309 2338 4.602340 AACGTCAAGACCATTACTGAGT 57.398 40.909 0.00 0.00 0.00 3.41
2310 2339 3.914312 ACGTCAAGACCATTACTGAGTG 58.086 45.455 0.00 0.00 0.00 3.51
2311 2340 2.668457 CGTCAAGACCATTACTGAGTGC 59.332 50.000 0.00 0.00 0.00 4.40
2312 2341 3.003480 GTCAAGACCATTACTGAGTGCC 58.997 50.000 0.00 0.00 0.00 5.01
2313 2342 2.906389 TCAAGACCATTACTGAGTGCCT 59.094 45.455 0.00 0.00 0.00 4.75
2314 2343 3.055819 TCAAGACCATTACTGAGTGCCTC 60.056 47.826 0.00 0.00 0.00 4.70
2315 2344 1.478510 AGACCATTACTGAGTGCCTCG 59.521 52.381 0.00 0.00 32.35 4.63
2316 2345 0.108138 ACCATTACTGAGTGCCTCGC 60.108 55.000 0.00 0.00 32.35 5.03
2317 2346 0.176680 CCATTACTGAGTGCCTCGCT 59.823 55.000 0.00 0.00 32.35 4.93
2318 2347 1.284657 CATTACTGAGTGCCTCGCTG 58.715 55.000 0.00 0.00 32.35 5.18
2319 2348 1.134995 CATTACTGAGTGCCTCGCTGA 60.135 52.381 0.00 0.00 32.35 4.26
2320 2349 1.186200 TTACTGAGTGCCTCGCTGAT 58.814 50.000 0.00 0.00 32.35 2.90
2321 2350 0.457443 TACTGAGTGCCTCGCTGATG 59.543 55.000 0.00 0.00 32.35 3.07
2322 2351 1.253593 ACTGAGTGCCTCGCTGATGA 61.254 55.000 0.00 0.00 32.35 2.92
2323 2352 0.528033 CTGAGTGCCTCGCTGATGAG 60.528 60.000 0.00 0.00 32.35 2.90
2324 2353 1.882167 GAGTGCCTCGCTGATGAGC 60.882 63.158 0.00 0.00 42.37 4.26
2325 2354 2.186384 GTGCCTCGCTGATGAGCT 59.814 61.111 1.81 0.00 43.77 4.09
2326 2355 2.172372 GTGCCTCGCTGATGAGCTG 61.172 63.158 1.81 0.00 43.77 4.24
2327 2356 2.353610 TGCCTCGCTGATGAGCTGA 61.354 57.895 1.81 0.66 43.77 4.26
2328 2357 1.069427 GCCTCGCTGATGAGCTGAT 59.931 57.895 1.81 0.00 43.77 2.90
2329 2358 0.945265 GCCTCGCTGATGAGCTGATC 60.945 60.000 6.18 6.18 43.77 2.92
2330 2359 0.388294 CCTCGCTGATGAGCTGATCA 59.612 55.000 15.39 15.39 43.77 2.92
2331 2360 1.202498 CCTCGCTGATGAGCTGATCAA 60.202 52.381 16.88 1.71 43.77 2.57
2332 2361 2.548280 CCTCGCTGATGAGCTGATCAAT 60.548 50.000 16.88 0.00 43.77 2.57
2333 2362 2.476997 CTCGCTGATGAGCTGATCAATG 59.523 50.000 16.88 11.79 43.77 2.82
2334 2363 1.069838 CGCTGATGAGCTGATCAATGC 60.070 52.381 16.88 15.67 43.77 3.56
2335 2364 2.222886 GCTGATGAGCTGATCAATGCT 58.777 47.619 16.88 9.08 42.53 3.79
2336 2365 3.400255 GCTGATGAGCTGATCAATGCTA 58.600 45.455 16.88 0.00 42.53 3.49
2337 2366 3.186817 GCTGATGAGCTGATCAATGCTAC 59.813 47.826 16.88 5.67 42.53 3.58
2338 2367 4.633175 CTGATGAGCTGATCAATGCTACT 58.367 43.478 16.88 0.80 42.53 2.57
2339 2368 4.629092 TGATGAGCTGATCAATGCTACTC 58.371 43.478 13.88 9.44 42.53 2.59
2340 2369 4.100498 TGATGAGCTGATCAATGCTACTCA 59.900 41.667 13.88 11.49 42.53 3.41
2341 2370 4.476628 TGAGCTGATCAATGCTACTCAA 57.523 40.909 9.28 0.00 39.91 3.02
2342 2371 4.439968 TGAGCTGATCAATGCTACTCAAG 58.560 43.478 9.28 0.00 39.91 3.02
2343 2372 3.806380 AGCTGATCAATGCTACTCAAGG 58.194 45.455 7.64 0.00 37.81 3.61
2344 2373 3.453717 AGCTGATCAATGCTACTCAAGGA 59.546 43.478 7.64 0.00 37.81 3.36
2345 2374 4.102838 AGCTGATCAATGCTACTCAAGGAT 59.897 41.667 7.64 0.00 38.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.591863 GCGTTCCGGAGTGATAGGC 60.592 63.158 3.34 2.73 0.00 3.93
12 13 2.276201 CAATTGCGTTCCGGAGTGATA 58.724 47.619 3.34 0.00 0.00 2.15
30 31 6.938030 AGTTAGATACCCAATTGAAACGACAA 59.062 34.615 7.12 0.00 0.00 3.18
58 59 2.492881 TCCATGTGCCATTGTCATCAAC 59.507 45.455 0.00 0.00 36.33 3.18
60 61 2.371306 CTCCATGTGCCATTGTCATCA 58.629 47.619 0.00 0.00 0.00 3.07
86 87 0.319641 AAAGAACTCCCGCAGTCGAC 60.320 55.000 7.70 7.70 38.10 4.20
90 91 0.537371 CCCAAAAGAACTCCCGCAGT 60.537 55.000 0.00 0.00 36.64 4.40
149 150 1.429463 GAAATCGTCTCGTTGGTGCT 58.571 50.000 0.00 0.00 0.00 4.40
152 153 3.488721 CGATAGGAAATCGTCTCGTTGGT 60.489 47.826 0.00 0.00 36.84 3.67
183 184 4.841246 ACCATAAACAGACCACTCTTCTCT 59.159 41.667 0.00 0.00 0.00 3.10
265 266 0.693049 CCCTCTGGGTTTGTGCTAGT 59.307 55.000 0.00 0.00 38.25 2.57
294 295 7.500992 CAGACTTCCAAATATAGTTCCAGCTA 58.499 38.462 0.00 0.00 0.00 3.32
295 296 6.352516 CAGACTTCCAAATATAGTTCCAGCT 58.647 40.000 0.00 0.00 0.00 4.24
309 310 1.140312 AGGGAACTGCAGACTTCCAA 58.860 50.000 28.03 0.00 41.13 3.53
320 321 8.887717 CAGTAATTTTCATCTTCTAGGGAACTG 58.112 37.037 0.00 0.00 43.88 3.16
347 348 2.125952 CTGTCGCGCATCTCCACA 60.126 61.111 8.75 0.00 0.00 4.17
405 406 3.854666 CAGACAAGTGGATCGAGTTGAT 58.145 45.455 26.34 14.37 41.06 2.57
411 412 0.969149 ACAGCAGACAAGTGGATCGA 59.031 50.000 0.00 0.00 0.00 3.59
417 418 2.238942 TACCACACAGCAGACAAGTG 57.761 50.000 0.00 0.00 39.12 3.16
429 430 3.515901 AGTCCTCTTCCTCAATACCACAC 59.484 47.826 0.00 0.00 0.00 3.82
438 442 2.594131 TGAAACGAGTCCTCTTCCTCA 58.406 47.619 0.00 0.00 0.00 3.86
444 448 3.005554 CAATGCATGAAACGAGTCCTCT 58.994 45.455 0.00 0.00 0.00 3.69
475 479 6.795144 TGTCCATAAAATTCTTGCATGGAT 57.205 33.333 3.39 0.00 45.09 3.41
477 481 6.649973 TGTTTGTCCATAAAATTCTTGCATGG 59.350 34.615 0.00 0.00 37.98 3.66
492 496 1.464608 CTTCGACGCATGTTTGTCCAT 59.535 47.619 8.60 0.00 0.00 3.41
540 544 6.266131 AGCTATTCCTTCCCATCACAAATA 57.734 37.500 0.00 0.00 0.00 1.40
560 564 3.073650 CCTGGCCAATAAGGAGATAAGCT 59.926 47.826 7.01 0.00 41.22 3.74
675 679 0.035630 ACTCGACGGTGGCTAGTACT 60.036 55.000 0.00 0.00 0.00 2.73
680 684 0.541392 TAGGTACTCGACGGTGGCTA 59.459 55.000 0.00 0.00 41.75 3.93
756 763 3.696548 CTGAAGTAGGCATTTTCCCTTCC 59.303 47.826 0.00 0.00 33.88 3.46
757 764 3.696548 CCTGAAGTAGGCATTTTCCCTTC 59.303 47.826 0.00 0.00 40.38 3.46
786 793 1.485294 TTTACCCTCAAGCCGGCAGA 61.485 55.000 31.54 24.29 0.00 4.26
795 802 2.289444 CGCAGGACTCTTTTACCCTCAA 60.289 50.000 0.00 0.00 0.00 3.02
796 803 1.275291 CGCAGGACTCTTTTACCCTCA 59.725 52.381 0.00 0.00 0.00 3.86
833 840 3.589579 CAAGTATGCCTTGCGCCA 58.410 55.556 4.18 0.00 43.84 5.69
846 853 4.602340 TCTAGAAACCGAAAGAGCAAGT 57.398 40.909 0.00 0.00 0.00 3.16
862 869 5.375283 TCCTCTCGAAGAAAGGATCTAGA 57.625 43.478 0.00 0.00 37.42 2.43
863 870 5.048083 CCATCCTCTCGAAGAAAGGATCTAG 60.048 48.000 12.82 5.53 37.42 2.43
879 886 3.498121 CCATAGCAGCAAATCCATCCTCT 60.498 47.826 0.00 0.00 0.00 3.69
890 897 0.106569 CACCATCCCCATAGCAGCAA 60.107 55.000 0.00 0.00 0.00 3.91
916 923 2.834549 TCAGGATCTCACCTTTGTCTCC 59.165 50.000 0.00 0.00 38.32 3.71
917 924 4.440880 CATCAGGATCTCACCTTTGTCTC 58.559 47.826 0.00 0.00 38.32 3.36
918 925 3.199508 CCATCAGGATCTCACCTTTGTCT 59.800 47.826 0.00 0.00 38.32 3.41
944 951 5.423886 TGCAATGAAAGATGTACCGATACA 58.576 37.500 0.00 0.00 45.37 2.29
948 955 4.940654 TCATTGCAATGAAAGATGTACCGA 59.059 37.500 34.23 11.46 42.11 4.69
1062 1069 1.859302 AACTGGAGAGAGCTTCGGAT 58.141 50.000 0.00 0.00 29.96 4.18
1065 1072 3.914312 TGTTAAACTGGAGAGAGCTTCG 58.086 45.455 0.00 0.00 0.00 3.79
1093 1100 1.070758 ACATGCCGAGTGAAGAAGTGT 59.929 47.619 0.00 0.00 0.00 3.55
1110 1117 3.584406 TCTCCAAGACAATCTGACCACAT 59.416 43.478 0.00 0.00 0.00 3.21
1112 1119 3.685139 TCTCCAAGACAATCTGACCAC 57.315 47.619 0.00 0.00 0.00 4.16
1180 1187 3.621268 TCGGCAACTCTATTTTGGAATCG 59.379 43.478 0.00 0.00 0.00 3.34
1223 1230 1.799258 AACCGTAGCACGTTCGGAGT 61.799 55.000 19.84 8.46 46.05 3.85
1273 1280 2.932234 CGAGAGGCCACACGTCCTT 61.932 63.158 11.58 0.00 33.49 3.36
1316 1323 1.378119 GCGGGGGTAAAGGGAGTTG 60.378 63.158 0.00 0.00 0.00 3.16
1363 1371 1.401761 TTTGGACATGCTGTGTTGCT 58.598 45.000 0.00 0.00 42.36 3.91
1364 1372 2.063266 CATTTGGACATGCTGTGTTGC 58.937 47.619 0.00 0.00 42.36 4.17
1545 1559 9.800433 AACATTTTCAAAATGCATCGTATCATA 57.200 25.926 20.72 0.00 0.00 2.15
1554 1568 4.510711 TGCACGAACATTTTCAAAATGCAT 59.489 33.333 20.72 11.34 34.00 3.96
1563 1577 5.649602 TTTTGGAATGCACGAACATTTTC 57.350 34.783 8.62 6.06 40.31 2.29
1636 1651 3.285745 GACGAAACACTTTTAAGCCACG 58.714 45.455 0.00 0.00 0.00 4.94
1639 1654 2.619646 TGGGACGAAACACTTTTAAGCC 59.380 45.455 0.00 0.00 0.00 4.35
1648 1663 1.227615 TTCGGGTGGGACGAAACAC 60.228 57.895 0.00 0.00 46.03 3.32
1657 1672 2.095617 GTGTTAACGATTTTCGGGTGGG 60.096 50.000 0.26 0.00 45.59 4.61
1661 1676 7.244898 TCAAATATGTGTTAACGATTTTCGGG 58.755 34.615 0.26 0.00 45.59 5.14
1767 1791 6.743575 ACTCCAGTATATGTCTTTGTTTGC 57.256 37.500 0.00 0.00 0.00 3.68
1881 1910 7.390718 ACCACTCAGTAGGATTTTTATGTGAAC 59.609 37.037 0.75 0.00 0.00 3.18
1883 1912 6.878923 CACCACTCAGTAGGATTTTTATGTGA 59.121 38.462 0.75 0.00 0.00 3.58
1892 1921 2.540383 TGCTCACCACTCAGTAGGATT 58.460 47.619 0.75 0.00 0.00 3.01
1893 1922 2.238084 TGCTCACCACTCAGTAGGAT 57.762 50.000 0.75 0.00 0.00 3.24
1894 1923 2.009681 TTGCTCACCACTCAGTAGGA 57.990 50.000 0.75 0.00 0.00 2.94
1895 1924 2.417719 GTTTGCTCACCACTCAGTAGG 58.582 52.381 0.00 0.00 0.00 3.18
1896 1925 2.037772 AGGTTTGCTCACCACTCAGTAG 59.962 50.000 7.53 0.00 39.62 2.57
1897 1926 2.037251 GAGGTTTGCTCACCACTCAGTA 59.963 50.000 7.53 0.00 39.62 2.74
1898 1927 0.839946 AGGTTTGCTCACCACTCAGT 59.160 50.000 7.53 0.00 39.62 3.41
1899 1928 1.517242 GAGGTTTGCTCACCACTCAG 58.483 55.000 7.53 0.00 39.62 3.35
1900 1929 0.108585 GGAGGTTTGCTCACCACTCA 59.891 55.000 7.53 0.00 39.62 3.41
1901 1930 0.606673 GGGAGGTTTGCTCACCACTC 60.607 60.000 7.53 0.00 39.62 3.51
1902 1931 1.456287 GGGAGGTTTGCTCACCACT 59.544 57.895 7.53 0.00 39.62 4.00
1903 1932 1.966451 CGGGAGGTTTGCTCACCAC 60.966 63.158 7.53 1.39 39.62 4.16
1904 1933 2.429930 CGGGAGGTTTGCTCACCA 59.570 61.111 7.53 0.00 39.62 4.17
1905 1934 3.056328 GCGGGAGGTTTGCTCACC 61.056 66.667 0.00 0.00 37.04 4.02
1906 1935 2.032681 AGCGGGAGGTTTGCTCAC 59.967 61.111 0.00 0.00 37.18 3.51
1909 1938 4.394712 CCGAGCGGGAGGTTTGCT 62.395 66.667 0.00 0.00 43.00 3.91
1920 1949 4.899239 CAGCTAAGCCCCCGAGCG 62.899 72.222 0.00 0.00 41.23 5.03
1922 1951 3.746949 CTGCAGCTAAGCCCCCGAG 62.747 68.421 0.00 0.00 0.00 4.63
1923 1952 3.785859 CTGCAGCTAAGCCCCCGA 61.786 66.667 0.00 0.00 0.00 5.14
1924 1953 4.101448 ACTGCAGCTAAGCCCCCG 62.101 66.667 15.27 0.00 0.00 5.73
1925 1954 2.124529 GACTGCAGCTAAGCCCCC 60.125 66.667 15.27 0.00 0.00 5.40
1926 1955 1.153269 GAGACTGCAGCTAAGCCCC 60.153 63.158 15.27 0.00 0.00 5.80
1927 1956 1.520342 CGAGACTGCAGCTAAGCCC 60.520 63.158 15.27 0.00 0.00 5.19
1928 1957 0.456221 TACGAGACTGCAGCTAAGCC 59.544 55.000 15.27 0.00 0.00 4.35
1929 1958 1.133407 AGTACGAGACTGCAGCTAAGC 59.867 52.381 15.27 0.00 36.87 3.09
1930 1959 2.537931 CGAGTACGAGACTGCAGCTAAG 60.538 54.545 15.27 11.60 39.06 2.18
1931 1960 1.397343 CGAGTACGAGACTGCAGCTAA 59.603 52.381 15.27 0.00 39.06 3.09
1932 1961 1.007580 CGAGTACGAGACTGCAGCTA 58.992 55.000 15.27 0.00 39.06 3.32
1933 1962 1.797441 CGAGTACGAGACTGCAGCT 59.203 57.895 15.27 12.17 39.06 4.24
1934 1963 1.870016 GCGAGTACGAGACTGCAGC 60.870 63.158 15.27 6.85 39.06 5.25
1935 1964 1.226435 GGCGAGTACGAGACTGCAG 60.226 63.158 13.48 13.48 39.06 4.41
1936 1965 0.392060 TAGGCGAGTACGAGACTGCA 60.392 55.000 8.91 0.00 39.06 4.41
1937 1966 0.731417 TTAGGCGAGTACGAGACTGC 59.269 55.000 8.91 0.00 39.06 4.40
1938 1967 2.008329 ACTTAGGCGAGTACGAGACTG 58.992 52.381 8.91 0.00 39.06 3.51
1939 1968 2.399916 ACTTAGGCGAGTACGAGACT 57.600 50.000 4.47 4.47 42.90 3.24
1940 1969 3.120060 TCAAACTTAGGCGAGTACGAGAC 60.120 47.826 0.00 0.00 42.66 3.36
1941 1970 3.076621 TCAAACTTAGGCGAGTACGAGA 58.923 45.455 0.00 0.00 42.66 4.04
1942 1971 3.482722 TCAAACTTAGGCGAGTACGAG 57.517 47.619 0.00 0.00 42.66 4.18
1943 1972 3.921119 TTCAAACTTAGGCGAGTACGA 57.079 42.857 0.00 0.00 42.66 3.43
1944 1973 4.977741 TTTTCAAACTTAGGCGAGTACG 57.022 40.909 0.00 0.00 42.93 3.67
1963 1992 3.369576 GCTCTCCACTCGGTAGGATTTTT 60.370 47.826 0.00 0.00 32.53 1.94
1964 1993 2.168728 GCTCTCCACTCGGTAGGATTTT 59.831 50.000 0.00 0.00 32.53 1.82
1965 1994 1.757699 GCTCTCCACTCGGTAGGATTT 59.242 52.381 0.00 0.00 32.53 2.17
1966 1995 1.342076 TGCTCTCCACTCGGTAGGATT 60.342 52.381 0.00 0.00 32.53 3.01
1967 1996 0.259065 TGCTCTCCACTCGGTAGGAT 59.741 55.000 0.00 0.00 32.53 3.24
1968 1997 0.039180 TTGCTCTCCACTCGGTAGGA 59.961 55.000 0.00 0.00 0.00 2.94
1969 1998 1.067821 GATTGCTCTCCACTCGGTAGG 59.932 57.143 0.00 0.00 0.00 3.18
1970 1999 1.067821 GGATTGCTCTCCACTCGGTAG 59.932 57.143 0.79 0.00 35.24 3.18
1971 2000 1.112113 GGATTGCTCTCCACTCGGTA 58.888 55.000 0.79 0.00 35.24 4.02
1972 2001 0.616111 AGGATTGCTCTCCACTCGGT 60.616 55.000 7.71 0.00 37.81 4.69
1973 2002 0.103937 GAGGATTGCTCTCCACTCGG 59.896 60.000 7.71 0.00 37.81 4.63
1974 2003 3.657956 GAGGATTGCTCTCCACTCG 57.342 57.895 7.71 0.00 37.81 4.18
1980 2009 0.103937 CGAGTGGGAGGATTGCTCTC 59.896 60.000 5.11 1.19 0.00 3.20
1981 2010 0.324738 TCGAGTGGGAGGATTGCTCT 60.325 55.000 5.11 0.00 0.00 4.09
1982 2011 0.103937 CTCGAGTGGGAGGATTGCTC 59.896 60.000 3.62 0.00 0.00 4.26
1983 2012 2.206635 CTCGAGTGGGAGGATTGCT 58.793 57.895 3.62 0.00 0.00 3.91
1984 2013 4.844420 CTCGAGTGGGAGGATTGC 57.156 61.111 3.62 0.00 0.00 3.56
1992 2021 2.365105 TAAGCCCCCTCGAGTGGG 60.365 66.667 27.19 27.19 46.68 4.61
1993 2022 3.095347 GCTAAGCCCCCTCGAGTGG 62.095 68.421 12.31 9.67 0.00 4.00
1994 2023 0.755698 TAGCTAAGCCCCCTCGAGTG 60.756 60.000 12.31 0.00 0.00 3.51
1995 2024 0.756070 GTAGCTAAGCCCCCTCGAGT 60.756 60.000 12.31 0.00 0.00 4.18
1996 2025 0.755698 TGTAGCTAAGCCCCCTCGAG 60.756 60.000 5.13 5.13 0.00 4.04
1997 2026 0.755698 CTGTAGCTAAGCCCCCTCGA 60.756 60.000 0.00 0.00 0.00 4.04
1998 2027 1.043673 ACTGTAGCTAAGCCCCCTCG 61.044 60.000 0.00 0.00 0.00 4.63
1999 2028 0.753867 GACTGTAGCTAAGCCCCCTC 59.246 60.000 0.00 0.00 0.00 4.30
2000 2029 0.691413 GGACTGTAGCTAAGCCCCCT 60.691 60.000 0.00 0.00 0.00 4.79
2001 2030 1.697082 GGGACTGTAGCTAAGCCCCC 61.697 65.000 13.04 13.12 0.00 5.40
2002 2031 1.830836 GGGACTGTAGCTAAGCCCC 59.169 63.158 10.13 10.13 0.00 5.80
2003 2032 1.328430 ACGGGACTGTAGCTAAGCCC 61.328 60.000 16.42 16.42 0.00 5.19
2004 2033 1.066757 GTACGGGACTGTAGCTAAGCC 59.933 57.143 0.00 2.22 0.00 4.35
2005 2034 2.022934 AGTACGGGACTGTAGCTAAGC 58.977 52.381 0.00 0.00 36.87 3.09
2006 2035 2.287373 CGAGTACGGGACTGTAGCTAAG 59.713 54.545 0.00 0.00 39.06 2.18
2007 2036 2.283298 CGAGTACGGGACTGTAGCTAA 58.717 52.381 0.00 0.00 39.06 3.09
2008 2037 1.945387 CGAGTACGGGACTGTAGCTA 58.055 55.000 0.00 0.00 39.06 3.32
2009 2038 1.375098 GCGAGTACGGGACTGTAGCT 61.375 60.000 0.00 0.00 39.06 3.32
2010 2039 1.063811 GCGAGTACGGGACTGTAGC 59.936 63.158 0.00 0.00 39.06 3.58
2011 2040 0.747283 AGGCGAGTACGGGACTGTAG 60.747 60.000 0.00 0.00 39.06 2.74
2012 2041 0.541392 TAGGCGAGTACGGGACTGTA 59.459 55.000 0.00 0.00 39.06 2.74
2013 2042 0.322816 TTAGGCGAGTACGGGACTGT 60.323 55.000 0.00 0.00 39.06 3.55
2014 2043 0.381089 CTTAGGCGAGTACGGGACTG 59.619 60.000 0.00 0.00 39.06 3.51
2015 2044 0.034670 ACTTAGGCGAGTACGGGACT 60.035 55.000 0.00 0.00 42.90 3.85
2016 2045 0.813821 AACTTAGGCGAGTACGGGAC 59.186 55.000 0.00 0.00 40.15 4.46
2017 2046 1.203052 CAAACTTAGGCGAGTACGGGA 59.797 52.381 0.00 0.00 40.15 5.14
2018 2047 1.203052 TCAAACTTAGGCGAGTACGGG 59.797 52.381 0.00 0.00 40.15 5.28
2019 2048 2.642139 TCAAACTTAGGCGAGTACGG 57.358 50.000 0.00 0.00 40.15 4.02
2020 2049 4.977741 TTTTCAAACTTAGGCGAGTACG 57.022 40.909 0.00 0.00 42.93 3.67
2021 2050 6.148976 AGGATTTTTCAAACTTAGGCGAGTAC 59.851 38.462 0.00 0.00 0.00 2.73
2022 2051 6.235664 AGGATTTTTCAAACTTAGGCGAGTA 58.764 36.000 0.00 0.00 0.00 2.59
2023 2052 5.070685 AGGATTTTTCAAACTTAGGCGAGT 58.929 37.500 0.00 0.00 0.00 4.18
2024 2053 5.629079 AGGATTTTTCAAACTTAGGCGAG 57.371 39.130 0.00 0.00 0.00 5.03
2025 2054 5.413523 GGTAGGATTTTTCAAACTTAGGCGA 59.586 40.000 0.00 0.00 0.00 5.54
2026 2055 5.637809 GGTAGGATTTTTCAAACTTAGGCG 58.362 41.667 0.00 0.00 0.00 5.52
2027 2056 5.413523 TCGGTAGGATTTTTCAAACTTAGGC 59.586 40.000 0.00 0.00 0.00 3.93
2028 2057 6.653740 ACTCGGTAGGATTTTTCAAACTTAGG 59.346 38.462 0.00 0.00 0.00 2.69
2029 2058 7.360946 CCACTCGGTAGGATTTTTCAAACTTAG 60.361 40.741 0.00 0.00 0.00 2.18
2030 2059 6.428771 CCACTCGGTAGGATTTTTCAAACTTA 59.571 38.462 0.00 0.00 0.00 2.24
2031 2060 5.240844 CCACTCGGTAGGATTTTTCAAACTT 59.759 40.000 0.00 0.00 0.00 2.66
2032 2061 4.760204 CCACTCGGTAGGATTTTTCAAACT 59.240 41.667 0.00 0.00 0.00 2.66
2033 2062 4.517832 ACCACTCGGTAGGATTTTTCAAAC 59.482 41.667 0.00 0.00 46.71 2.93
2034 2063 4.517453 CACCACTCGGTAGGATTTTTCAAA 59.483 41.667 0.00 0.00 46.94 2.69
2035 2064 4.069304 CACCACTCGGTAGGATTTTTCAA 58.931 43.478 0.00 0.00 46.94 2.69
2036 2065 3.325425 TCACCACTCGGTAGGATTTTTCA 59.675 43.478 0.00 0.00 46.94 2.69
2037 2066 3.933332 CTCACCACTCGGTAGGATTTTTC 59.067 47.826 0.00 0.00 46.94 2.29
2038 2067 3.868754 GCTCACCACTCGGTAGGATTTTT 60.869 47.826 0.00 0.00 46.94 1.94
2039 2068 2.354805 GCTCACCACTCGGTAGGATTTT 60.355 50.000 0.00 0.00 46.94 1.82
2040 2069 1.207329 GCTCACCACTCGGTAGGATTT 59.793 52.381 0.00 0.00 46.94 2.17
2041 2070 0.824759 GCTCACCACTCGGTAGGATT 59.175 55.000 0.00 0.00 46.94 3.01
2042 2071 0.324368 TGCTCACCACTCGGTAGGAT 60.324 55.000 0.00 0.00 46.94 3.24
2043 2072 0.541063 TTGCTCACCACTCGGTAGGA 60.541 55.000 0.00 0.00 46.94 2.94
2044 2073 0.320374 TTTGCTCACCACTCGGTAGG 59.680 55.000 0.00 0.00 46.94 3.18
2045 2074 1.429463 GTTTGCTCACCACTCGGTAG 58.571 55.000 0.00 0.00 46.94 3.18
2046 2075 0.034337 GGTTTGCTCACCACTCGGTA 59.966 55.000 0.32 0.00 46.94 4.02
2048 2077 0.951040 GAGGTTTGCTCACCACTCGG 60.951 60.000 7.53 0.00 39.62 4.63
2049 2078 0.951040 GGAGGTTTGCTCACCACTCG 60.951 60.000 7.53 0.00 39.62 4.18
2050 2079 0.606673 GGGAGGTTTGCTCACCACTC 60.607 60.000 7.53 0.00 39.62 3.51
2051 2080 1.352622 TGGGAGGTTTGCTCACCACT 61.353 55.000 7.53 0.00 39.62 4.00
2052 2081 1.150536 TGGGAGGTTTGCTCACCAC 59.849 57.895 7.53 1.39 39.62 4.16
2053 2082 1.150536 GTGGGAGGTTTGCTCACCA 59.849 57.895 7.53 0.00 39.62 4.17
2054 2083 0.606673 GAGTGGGAGGTTTGCTCACC 60.607 60.000 0.00 0.00 37.04 4.02
2055 2084 0.951040 CGAGTGGGAGGTTTGCTCAC 60.951 60.000 0.00 0.00 0.00 3.51
2056 2085 1.371183 CGAGTGGGAGGTTTGCTCA 59.629 57.895 0.00 0.00 0.00 4.26
2057 2086 1.376037 CCGAGTGGGAGGTTTGCTC 60.376 63.158 0.00 0.00 38.47 4.26
2058 2087 1.841556 TCCGAGTGGGAGGTTTGCT 60.842 57.895 0.00 0.00 40.94 3.91
2059 2088 2.747686 TCCGAGTGGGAGGTTTGC 59.252 61.111 0.00 0.00 40.94 3.68
2066 2095 2.058595 GCTAAGCCTCCGAGTGGGA 61.059 63.158 0.00 0.00 44.68 4.37
2067 2096 2.060980 AGCTAAGCCTCCGAGTGGG 61.061 63.158 0.00 0.00 35.24 4.61
2068 2097 1.142748 CAGCTAAGCCTCCGAGTGG 59.857 63.158 0.00 0.00 0.00 4.00
2069 2098 1.520342 GCAGCTAAGCCTCCGAGTG 60.520 63.158 0.00 0.00 0.00 3.51
2070 2099 1.954362 CTGCAGCTAAGCCTCCGAGT 61.954 60.000 0.00 0.00 0.00 4.18
2071 2100 1.227205 CTGCAGCTAAGCCTCCGAG 60.227 63.158 0.00 0.00 0.00 4.63
2072 2101 1.949847 GACTGCAGCTAAGCCTCCGA 61.950 60.000 15.27 0.00 0.00 4.55
2073 2102 1.520342 GACTGCAGCTAAGCCTCCG 60.520 63.158 15.27 0.00 0.00 4.63
2074 2103 0.179086 GAGACTGCAGCTAAGCCTCC 60.179 60.000 15.27 0.00 0.00 4.30
2075 2104 0.534412 TGAGACTGCAGCTAAGCCTC 59.466 55.000 15.27 11.05 0.00 4.70
2076 2105 1.202330 ATGAGACTGCAGCTAAGCCT 58.798 50.000 15.27 1.24 0.00 4.58
2077 2106 2.102252 AGTATGAGACTGCAGCTAAGCC 59.898 50.000 15.27 1.00 36.87 4.35
2078 2107 3.380142 GAGTATGAGACTGCAGCTAAGC 58.620 50.000 15.27 0.00 39.06 3.09
2079 2108 3.626977 CGAGTATGAGACTGCAGCTAAG 58.373 50.000 15.27 0.00 39.06 2.18
2080 2109 2.223595 GCGAGTATGAGACTGCAGCTAA 60.224 50.000 15.27 5.61 39.06 3.09
2081 2110 1.335182 GCGAGTATGAGACTGCAGCTA 59.665 52.381 15.27 0.00 39.06 3.32
2082 2111 0.102120 GCGAGTATGAGACTGCAGCT 59.898 55.000 15.27 12.17 39.06 4.24
2083 2112 0.873743 GGCGAGTATGAGACTGCAGC 60.874 60.000 15.27 6.85 39.06 5.25
2084 2113 0.743688 AGGCGAGTATGAGACTGCAG 59.256 55.000 13.48 13.48 39.06 4.41
2085 2114 2.052782 TAGGCGAGTATGAGACTGCA 57.947 50.000 0.00 0.00 39.06 4.41
2086 2115 2.359531 ACTTAGGCGAGTATGAGACTGC 59.640 50.000 0.00 0.00 39.06 4.40
2087 2116 4.640789 AACTTAGGCGAGTATGAGACTG 57.359 45.455 0.00 0.00 39.06 3.51
2088 2117 4.142138 CCAAACTTAGGCGAGTATGAGACT 60.142 45.833 0.00 0.00 42.90 3.24
2089 2118 4.113354 CCAAACTTAGGCGAGTATGAGAC 58.887 47.826 0.00 0.00 0.00 3.36
2090 2119 4.021229 TCCAAACTTAGGCGAGTATGAGA 58.979 43.478 0.00 0.00 0.00 3.27
2091 2120 4.386867 TCCAAACTTAGGCGAGTATGAG 57.613 45.455 0.00 0.00 0.00 2.90
2092 2121 4.811969 TTCCAAACTTAGGCGAGTATGA 57.188 40.909 0.00 0.00 0.00 2.15
2093 2122 5.873179 TTTTCCAAACTTAGGCGAGTATG 57.127 39.130 0.00 0.00 0.00 2.39
2094 2123 6.095021 GGATTTTTCCAAACTTAGGCGAGTAT 59.905 38.462 0.00 0.00 0.00 2.12
2095 2124 5.413523 GGATTTTTCCAAACTTAGGCGAGTA 59.586 40.000 0.00 0.00 0.00 2.59
2096 2125 4.217767 GGATTTTTCCAAACTTAGGCGAGT 59.782 41.667 0.00 0.00 0.00 4.18
2097 2126 4.459337 AGGATTTTTCCAAACTTAGGCGAG 59.541 41.667 0.00 0.00 0.00 5.03
2098 2127 4.403734 AGGATTTTTCCAAACTTAGGCGA 58.596 39.130 0.00 0.00 0.00 5.54
2099 2128 4.783764 AGGATTTTTCCAAACTTAGGCG 57.216 40.909 0.00 0.00 0.00 5.52
2100 2129 5.392703 CGGTAGGATTTTTCCAAACTTAGGC 60.393 44.000 0.00 0.00 0.00 3.93
2101 2130 5.941647 TCGGTAGGATTTTTCCAAACTTAGG 59.058 40.000 0.00 0.00 0.00 2.69
2102 2131 6.653740 ACTCGGTAGGATTTTTCCAAACTTAG 59.346 38.462 0.00 0.00 0.00 2.18
2103 2132 6.428771 CACTCGGTAGGATTTTTCCAAACTTA 59.571 38.462 0.00 0.00 0.00 2.24
2104 2133 5.240844 CACTCGGTAGGATTTTTCCAAACTT 59.759 40.000 0.00 0.00 0.00 2.66
2105 2134 4.760204 CACTCGGTAGGATTTTTCCAAACT 59.240 41.667 0.00 0.00 0.00 2.66
2106 2135 4.082949 CCACTCGGTAGGATTTTTCCAAAC 60.083 45.833 0.00 0.00 0.00 2.93
2107 2136 4.076394 CCACTCGGTAGGATTTTTCCAAA 58.924 43.478 0.00 0.00 0.00 3.28
2108 2137 3.328343 TCCACTCGGTAGGATTTTTCCAA 59.672 43.478 0.00 0.00 0.00 3.53
2109 2138 2.907696 TCCACTCGGTAGGATTTTTCCA 59.092 45.455 0.00 0.00 0.00 3.53
2110 2139 3.197116 TCTCCACTCGGTAGGATTTTTCC 59.803 47.826 0.00 0.00 32.53 3.13
2111 2140 4.434520 CTCTCCACTCGGTAGGATTTTTC 58.565 47.826 0.00 0.00 32.53 2.29
2112 2141 3.369576 GCTCTCCACTCGGTAGGATTTTT 60.370 47.826 0.00 0.00 32.53 1.94
2113 2142 2.168728 GCTCTCCACTCGGTAGGATTTT 59.831 50.000 0.00 0.00 32.53 1.82
2114 2143 1.757699 GCTCTCCACTCGGTAGGATTT 59.242 52.381 0.00 0.00 32.53 2.17
2115 2144 1.404843 GCTCTCCACTCGGTAGGATT 58.595 55.000 0.00 0.00 32.53 3.01
2116 2145 0.820074 CGCTCTCCACTCGGTAGGAT 60.820 60.000 0.00 0.00 32.53 3.24
2117 2146 1.451567 CGCTCTCCACTCGGTAGGA 60.452 63.158 0.00 0.00 0.00 2.94
2118 2147 0.820074 ATCGCTCTCCACTCGGTAGG 60.820 60.000 0.00 0.00 0.00 3.18
2119 2148 0.589223 GATCGCTCTCCACTCGGTAG 59.411 60.000 0.00 0.00 0.00 3.18
2120 2149 0.818445 GGATCGCTCTCCACTCGGTA 60.818 60.000 0.00 0.00 35.24 4.02
2121 2150 2.122167 GGATCGCTCTCCACTCGGT 61.122 63.158 0.00 0.00 35.24 4.69
2122 2151 1.791103 GAGGATCGCTCTCCACTCGG 61.791 65.000 4.46 0.00 37.81 4.63
2123 2152 1.652012 GAGGATCGCTCTCCACTCG 59.348 63.158 4.46 0.00 37.81 4.18
2127 2156 2.230189 AGTGGGAGGATCGCTCTCCA 62.230 60.000 15.77 14.12 46.88 3.86
2128 2157 1.456705 AGTGGGAGGATCGCTCTCC 60.457 63.158 7.74 7.74 46.88 3.71
2129 2158 4.268720 AGTGGGAGGATCGCTCTC 57.731 61.111 10.01 7.42 46.88 3.20
2142 2171 1.078426 CAACTAAGCCCCCGAGTGG 60.078 63.158 0.00 0.00 0.00 4.00
2143 2172 1.745489 GCAACTAAGCCCCCGAGTG 60.745 63.158 0.00 0.00 0.00 3.51
2144 2173 2.185310 CTGCAACTAAGCCCCCGAGT 62.185 60.000 0.00 0.00 0.00 4.18
2145 2174 1.450312 CTGCAACTAAGCCCCCGAG 60.450 63.158 0.00 0.00 0.00 4.63
2146 2175 2.180159 GACTGCAACTAAGCCCCCGA 62.180 60.000 0.00 0.00 0.00 5.14
2147 2176 1.745489 GACTGCAACTAAGCCCCCG 60.745 63.158 0.00 0.00 0.00 5.73
2148 2177 1.378646 GGACTGCAACTAAGCCCCC 60.379 63.158 0.00 0.00 0.00 5.40
2149 2178 1.378646 GGGACTGCAACTAAGCCCC 60.379 63.158 0.00 0.00 0.00 5.80
2150 2179 0.034089 ATGGGACTGCAACTAAGCCC 60.034 55.000 0.00 0.00 33.84 5.19
2151 2180 1.098050 CATGGGACTGCAACTAAGCC 58.902 55.000 0.00 0.00 0.00 4.35
2152 2181 0.453390 GCATGGGACTGCAACTAAGC 59.547 55.000 0.00 0.00 41.87 3.09
2153 2182 2.012673 GAGCATGGGACTGCAACTAAG 58.987 52.381 0.00 0.00 44.77 2.18
2154 2183 1.675714 CGAGCATGGGACTGCAACTAA 60.676 52.381 0.00 0.00 44.77 2.24
2155 2184 0.108186 CGAGCATGGGACTGCAACTA 60.108 55.000 0.00 0.00 44.77 2.24
2156 2185 1.376424 CGAGCATGGGACTGCAACT 60.376 57.895 0.00 0.00 44.77 3.16
2157 2186 3.044059 GCGAGCATGGGACTGCAAC 62.044 63.158 0.00 0.00 44.77 4.17
2158 2187 2.747460 GCGAGCATGGGACTGCAA 60.747 61.111 0.00 0.00 44.77 4.08
2159 2188 4.783621 GGCGAGCATGGGACTGCA 62.784 66.667 0.00 0.00 44.77 4.41
2160 2189 2.593468 TTAGGCGAGCATGGGACTGC 62.593 60.000 0.00 0.00 42.62 4.40
2161 2190 0.531532 CTTAGGCGAGCATGGGACTG 60.532 60.000 0.00 0.00 0.00 3.51
2162 2191 0.978146 ACTTAGGCGAGCATGGGACT 60.978 55.000 0.00 0.00 0.00 3.85
2163 2192 0.107654 AACTTAGGCGAGCATGGGAC 60.108 55.000 0.00 0.00 0.00 4.46
2164 2193 0.618458 AAACTTAGGCGAGCATGGGA 59.382 50.000 0.00 0.00 0.00 4.37
2165 2194 0.734889 CAAACTTAGGCGAGCATGGG 59.265 55.000 0.00 0.00 0.00 4.00
2166 2195 0.734889 CCAAACTTAGGCGAGCATGG 59.265 55.000 0.00 2.78 0.00 3.66
2167 2196 1.737838 TCCAAACTTAGGCGAGCATG 58.262 50.000 0.00 0.00 0.00 4.06
2168 2197 2.489938 TTCCAAACTTAGGCGAGCAT 57.510 45.000 0.00 0.00 0.00 3.79
2169 2198 2.264005 TTTCCAAACTTAGGCGAGCA 57.736 45.000 0.00 0.00 0.00 4.26
2170 2199 2.351447 GGTTTTCCAAACTTAGGCGAGC 60.351 50.000 0.00 0.00 40.31 5.03
2171 2200 3.146847 AGGTTTTCCAAACTTAGGCGAG 58.853 45.455 0.00 0.00 43.73 5.03
2172 2201 3.217681 AGGTTTTCCAAACTTAGGCGA 57.782 42.857 0.00 0.00 43.73 5.54
2173 2202 4.320714 GGTAAGGTTTTCCAAACTTAGGCG 60.321 45.833 0.00 0.00 41.91 5.52
2174 2203 4.320714 CGGTAAGGTTTTCCAAACTTAGGC 60.321 45.833 0.00 0.00 41.91 3.93
2175 2204 4.216902 CCGGTAAGGTTTTCCAAACTTAGG 59.783 45.833 0.00 0.00 41.91 2.69
2176 2205 4.216902 CCCGGTAAGGTTTTCCAAACTTAG 59.783 45.833 0.00 0.00 41.91 2.18
2177 2206 4.143543 CCCGGTAAGGTTTTCCAAACTTA 58.856 43.478 0.00 0.00 38.23 2.24
2178 2207 2.960384 CCCGGTAAGGTTTTCCAAACTT 59.040 45.455 0.00 0.00 42.89 2.66
2179 2208 2.091720 ACCCGGTAAGGTTTTCCAAACT 60.092 45.455 0.00 0.00 43.73 2.66
2180 2209 2.034939 CACCCGGTAAGGTTTTCCAAAC 59.965 50.000 0.00 0.00 43.73 2.93
2181 2210 2.308690 CACCCGGTAAGGTTTTCCAAA 58.691 47.619 0.00 0.00 43.73 3.28
2182 2211 1.479021 CCACCCGGTAAGGTTTTCCAA 60.479 52.381 0.00 0.00 43.73 3.53
2183 2212 0.110869 CCACCCGGTAAGGTTTTCCA 59.889 55.000 0.00 0.00 43.73 3.53
2184 2213 0.111061 ACCACCCGGTAAGGTTTTCC 59.889 55.000 0.00 0.00 46.71 3.13
2185 2214 3.731716 ACCACCCGGTAAGGTTTTC 57.268 52.632 0.00 0.00 46.71 2.29
2195 2224 1.503818 CGTTTCTGTCAACCACCCGG 61.504 60.000 0.00 0.00 38.77 5.73
2196 2225 0.812412 ACGTTTCTGTCAACCACCCG 60.812 55.000 0.00 0.00 0.00 5.28
2197 2226 0.942252 GACGTTTCTGTCAACCACCC 59.058 55.000 0.00 0.00 38.75 4.61
2198 2227 1.658994 TGACGTTTCTGTCAACCACC 58.341 50.000 0.00 0.00 45.40 4.61
2204 2233 0.179234 TGGCCTTGACGTTTCTGTCA 59.821 50.000 3.32 0.00 46.63 3.58
2205 2234 1.523758 ATGGCCTTGACGTTTCTGTC 58.476 50.000 3.32 0.00 39.37 3.51
2206 2235 1.608590 CAATGGCCTTGACGTTTCTGT 59.391 47.619 3.32 0.00 36.97 3.41
2207 2236 1.666888 GCAATGGCCTTGACGTTTCTG 60.667 52.381 16.28 0.00 36.97 3.02
2208 2237 0.598065 GCAATGGCCTTGACGTTTCT 59.402 50.000 16.28 0.00 36.97 2.52
2209 2238 0.729140 CGCAATGGCCTTGACGTTTC 60.729 55.000 16.28 0.47 36.97 2.78
2210 2239 1.285641 CGCAATGGCCTTGACGTTT 59.714 52.632 16.28 0.00 36.97 3.60
2211 2240 2.625823 CCGCAATGGCCTTGACGTT 61.626 57.895 16.28 0.00 36.97 3.99
2212 2241 3.055719 CCGCAATGGCCTTGACGT 61.056 61.111 16.28 0.00 36.97 4.34
2213 2242 2.745884 TCCGCAATGGCCTTGACG 60.746 61.111 16.28 16.50 36.97 4.35
2214 2243 1.675641 ACTCCGCAATGGCCTTGAC 60.676 57.895 16.28 8.42 36.97 3.18
2215 2244 1.675310 CACTCCGCAATGGCCTTGA 60.675 57.895 16.28 0.00 36.97 3.02
2216 2245 2.879907 CACTCCGCAATGGCCTTG 59.120 61.111 3.32 7.45 37.80 3.61
2217 2246 3.064324 GCACTCCGCAATGGCCTT 61.064 61.111 3.32 0.00 41.79 4.35
2220 2249 3.064324 AAGGCACTCCGCAATGGC 61.064 61.111 0.00 0.00 45.17 4.40
2221 2250 2.879907 CAAGGCACTCCGCAATGG 59.120 61.111 0.00 0.00 45.17 3.16
2222 2251 2.180017 GCAAGGCACTCCGCAATG 59.820 61.111 0.00 0.00 45.17 2.82
2223 2252 2.034687 AGCAAGGCACTCCGCAAT 59.965 55.556 0.00 0.00 45.17 3.56
2224 2253 2.753009 ATCAGCAAGGCACTCCGCAA 62.753 55.000 0.00 0.00 45.17 4.85
2225 2254 3.258228 ATCAGCAAGGCACTCCGCA 62.258 57.895 0.00 0.00 45.17 5.69
2226 2255 2.437359 ATCAGCAAGGCACTCCGC 60.437 61.111 0.00 0.00 38.49 5.54
2227 2256 1.078918 TCATCAGCAAGGCACTCCG 60.079 57.895 0.00 0.00 38.49 4.63
2228 2257 1.375098 GCTCATCAGCAAGGCACTCC 61.375 60.000 0.00 0.00 46.06 3.85
2229 2258 2.096596 GCTCATCAGCAAGGCACTC 58.903 57.895 0.00 0.00 46.06 3.51
2230 2259 4.315588 GCTCATCAGCAAGGCACT 57.684 55.556 0.00 0.00 46.06 4.40
2239 2268 4.633175 AGTAGCATTGATCAGCTCATCAG 58.367 43.478 12.35 0.00 42.05 2.90
2240 2269 4.100498 TGAGTAGCATTGATCAGCTCATCA 59.900 41.667 12.35 13.84 42.05 3.07
2241 2270 4.629092 TGAGTAGCATTGATCAGCTCATC 58.371 43.478 12.35 11.82 42.05 2.92
2242 2271 4.684484 TGAGTAGCATTGATCAGCTCAT 57.316 40.909 12.35 3.60 42.05 2.90
2243 2272 4.439968 CTTGAGTAGCATTGATCAGCTCA 58.560 43.478 12.35 9.50 42.05 4.26
2244 2273 3.808726 CCTTGAGTAGCATTGATCAGCTC 59.191 47.826 12.35 7.40 42.05 4.09
2245 2274 3.453717 TCCTTGAGTAGCATTGATCAGCT 59.546 43.478 13.39 13.39 44.55 4.24
2246 2275 3.801698 TCCTTGAGTAGCATTGATCAGC 58.198 45.455 0.00 0.00 0.00 4.26
2247 2276 5.466058 GTGATCCTTGAGTAGCATTGATCAG 59.534 44.000 0.00 0.00 41.03 2.90
2248 2277 5.363101 GTGATCCTTGAGTAGCATTGATCA 58.637 41.667 0.00 0.00 39.54 2.92
2249 2278 4.754114 GGTGATCCTTGAGTAGCATTGATC 59.246 45.833 0.00 0.00 35.80 2.92
2250 2279 4.445448 GGGTGATCCTTGAGTAGCATTGAT 60.445 45.833 0.00 0.00 0.00 2.57
2251 2280 3.118261 GGGTGATCCTTGAGTAGCATTGA 60.118 47.826 0.00 0.00 0.00 2.57
2252 2281 3.209410 GGGTGATCCTTGAGTAGCATTG 58.791 50.000 0.00 0.00 0.00 2.82
2253 2282 2.158900 CGGGTGATCCTTGAGTAGCATT 60.159 50.000 0.00 0.00 0.00 3.56
2254 2283 1.414181 CGGGTGATCCTTGAGTAGCAT 59.586 52.381 0.00 0.00 0.00 3.79
2255 2284 0.824109 CGGGTGATCCTTGAGTAGCA 59.176 55.000 0.00 0.00 0.00 3.49
2256 2285 1.112113 TCGGGTGATCCTTGAGTAGC 58.888 55.000 0.00 0.00 0.00 3.58
2257 2286 2.030717 CGATCGGGTGATCCTTGAGTAG 60.031 54.545 7.38 0.00 46.89 2.57
2258 2287 1.954382 CGATCGGGTGATCCTTGAGTA 59.046 52.381 7.38 0.00 46.89 2.59
2259 2288 0.747255 CGATCGGGTGATCCTTGAGT 59.253 55.000 7.38 0.00 46.89 3.41
2260 2289 0.032678 CCGATCGGGTGATCCTTGAG 59.967 60.000 26.95 0.00 46.89 3.02
2261 2290 2.124293 CCGATCGGGTGATCCTTGA 58.876 57.895 26.95 0.00 46.89 3.02
2262 2291 4.758692 CCGATCGGGTGATCCTTG 57.241 61.111 26.95 0.00 46.89 3.61
2274 2303 1.257539 GACGTTTCAGTCGACCGATC 58.742 55.000 13.01 3.38 0.00 3.69
2275 2304 0.594602 TGACGTTTCAGTCGACCGAT 59.405 50.000 13.01 0.00 43.70 4.18
2276 2305 0.381445 TTGACGTTTCAGTCGACCGA 59.619 50.000 13.01 4.22 43.70 4.69
2277 2306 0.776451 CTTGACGTTTCAGTCGACCG 59.224 55.000 13.01 10.79 43.70 4.79
2278 2307 1.785430 GTCTTGACGTTTCAGTCGACC 59.215 52.381 13.01 0.00 43.70 4.79
2279 2308 1.785430 GGTCTTGACGTTTCAGTCGAC 59.215 52.381 7.70 7.70 43.70 4.20
2280 2309 1.406180 TGGTCTTGACGTTTCAGTCGA 59.594 47.619 0.00 0.00 43.70 4.20
2281 2310 1.847818 TGGTCTTGACGTTTCAGTCG 58.152 50.000 0.00 0.00 43.70 4.18
2282 2311 4.989168 AGTAATGGTCTTGACGTTTCAGTC 59.011 41.667 0.00 0.00 41.30 3.51
2283 2312 4.750098 CAGTAATGGTCTTGACGTTTCAGT 59.250 41.667 0.00 0.00 31.71 3.41
2284 2313 4.988540 TCAGTAATGGTCTTGACGTTTCAG 59.011 41.667 0.00 0.00 31.71 3.02
2285 2314 4.951254 TCAGTAATGGTCTTGACGTTTCA 58.049 39.130 0.00 0.00 0.00 2.69
2286 2315 4.989168 ACTCAGTAATGGTCTTGACGTTTC 59.011 41.667 0.00 0.00 0.00 2.78
2287 2316 4.750098 CACTCAGTAATGGTCTTGACGTTT 59.250 41.667 0.00 0.00 0.00 3.60
2288 2317 4.307432 CACTCAGTAATGGTCTTGACGTT 58.693 43.478 0.00 0.00 0.00 3.99
2289 2318 3.861131 GCACTCAGTAATGGTCTTGACGT 60.861 47.826 0.00 0.00 0.00 4.34
2290 2319 2.668457 GCACTCAGTAATGGTCTTGACG 59.332 50.000 0.00 0.00 0.00 4.35
2291 2320 3.003480 GGCACTCAGTAATGGTCTTGAC 58.997 50.000 0.00 0.00 0.00 3.18
2292 2321 2.906389 AGGCACTCAGTAATGGTCTTGA 59.094 45.455 0.00 0.00 0.00 3.02
2293 2322 3.340814 AGGCACTCAGTAATGGTCTTG 57.659 47.619 0.00 0.00 0.00 3.02
2307 2336 2.186384 GCTCATCAGCGAGGCACT 59.814 61.111 0.00 0.00 37.35 4.40
2316 2345 4.633175 AGTAGCATTGATCAGCTCATCAG 58.367 43.478 12.35 0.00 42.05 2.90
2317 2346 4.100498 TGAGTAGCATTGATCAGCTCATCA 59.900 41.667 12.35 13.84 42.05 3.07
2318 2347 4.629092 TGAGTAGCATTGATCAGCTCATC 58.371 43.478 12.35 11.82 42.05 2.92
2319 2348 4.684484 TGAGTAGCATTGATCAGCTCAT 57.316 40.909 12.35 3.60 42.05 2.90
2320 2349 4.439968 CTTGAGTAGCATTGATCAGCTCA 58.560 43.478 12.35 9.50 42.05 4.26
2321 2350 3.808726 CCTTGAGTAGCATTGATCAGCTC 59.191 47.826 12.35 7.40 42.05 4.09
2322 2351 3.453717 TCCTTGAGTAGCATTGATCAGCT 59.546 43.478 13.39 13.39 44.55 4.24
2323 2352 3.801698 TCCTTGAGTAGCATTGATCAGC 58.198 45.455 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.