>input_sequence_83145
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGCAAGGTATGGCCTTGTCCATTCAGCACTCTG
ATCTTCCGGTGGTGGCGCAAACGGATTCATCCGAAGCTCTCTCCAGTTTAACAAATGGGACACTTCTTCACTCGGCATGT
GGTCAGATTGTCTTGGAGATCAAGGATCTTCTAGGTACTAGGGAGTTTTTTCCTCAAAAGATTAGTCGATTCCAAAATAG
AGTTGCCGATTGTTTGGCGAAATATAGCCACTCCGAACGTGCTACGGTTGTGTGGCTAGGTTCGGTTCCACCATGTATCA
AGGACGTGTGGCCTCTCGACTGTAACTCTATTCCTATGCAATCAA-CTCCCTTTACCCCCGCAAAAAAACTAA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr6B_1_TraesCS6B01G324500
CTCTTTCCGGCCTATCACTCCGGAACGCAATTGTCGTTTCAATTGGGTATCTAACTTCGTTGATGACAATGGCACATGGA
GGTATGGTCGACTGCGGGAGTTCTTTTGGGCCATGGATATTGAACACATTCTGAAAATTAGAACCTTGTAGCACCAACGA
GACGATTTCCTATCGTGGTACCCAGAGAAGAGTGGTCTGTTTATGGTGAGAAGTGCTTATAAACTGGCTACATCTGATCA
CAATACTGCTTTTGCCAACGGTGCTACTAGCACAAACCCAGAGGGGAACCGAGCTAGCTGGAACTATATTTGGAAGTCTG
CAGTTCCCTAGAAGATGAAAATTACTGTGTGGAGATGCGCGACAGGAACTTTGGCAACACAATAATGCAAATCTTACAGA
CACTTATCAACTCGATCCACTTGTCTGCTGT---GTGGTATTGAGGAAGAGGACTCGTTTCATGCATTGATTGCATGCAT
CCATGCAAGAATTTTATGGACAAACATGCGTCGAAGATGGCCACTCCCAGGGGACGATCTTCTTATTTGTGATGGGAAGG
AATAGCTTATCTCCTTATTGGCCAGGTGCTCTGAAGATGTTCGTGATATGCTCATCTTGTTTATTTGGCGGATCTGGCAA
CTGCGTAATGACATGACTCATGGGAAGGAAGTTCCCCCAGTACTAGCCACCGTCGAGTACCTAG---ATAGCTACTATAA
GTCCATCAAGTTAGCTGGACGATTCTCAACTGAAGATATTCTGGAAGGGAAAATGCCTACTTCAGGCTTGGCTCTGCCGG
CTTGAGGGTAAAAGAGTCCTGCGGTCCCCTGGCCGGCCCTGGCGCAAGGCATACTTGCTCTTTCGGTTTCTAGATCCTTT
CTTCGAGAGGATGGATTTGCTGCTATGGGGATGGTGCTTAGGGGAGACAAAGGTGAGATCCTGATGGCCGTGTATCGGTA
CATCTTTCATTGCAATGACTCACTTGAAGCAGAACTACATGCGATCATGCAAGGTATGGCCTTGTCCATTCAGCACTCTG
ATCTTCCGGTGGTGGCGCAAACGGATTCATCCGAAGCTCTCTCCAGTTTAACAAATGGGACACTTCTTCACTCGGCATGT
GGTCAGATTGTCTTGGAGATCAAGGATCTTCTAGGTACTAGGGAGTTTTTTCCTCAAAAGATTAGTCGATTCCAAAATAG
AGTTGCCGATTGTTTGGCGAAATATAGCCACTCCGAACGTGCTACGGTTGTGTGGCTAGGTTCGGTTCCACCATGTATCA
AGGACGTGTGGCCTCTCGACTGTAACTCTATTCCTATGCAATCAA-CTCCCTTTACCCCCGCAAAAAAACTAAGATTACC
ACCAGGCTTCAGCAACACAGCATGTCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAATATTATATTCTTGTGTTTGTGACATTTAA-AAATGTTTATGTGTTACAAA-AAAAG--GTATGTGACATTTAA--AA
ATGCTTAAACATTCTAAAACATATTTGTGTATTTAAAATATGATACGATGCATTTTGAAAATGTTCGTGCATTCCAAAA-
AACTGGTCATGACATTTTTTAAATGTTTATACAATGTATAAAATTGTTCGCGTGGCTTAAAAGTGTTTCGTCCCACCCGA
AAATCGTTAACACATATTTGAAAAAAGTTTCAAAACTTGTATTTGAAAAAAA-A-TGTTAATCATATGTTTCAAAAATAT
TAAGCAT---AT---TTCTT-TTAAATACTGCAAACAAAGACATATACTGGAGTATTTAA-AAC----ATCTGTATATCA
AAACATAGAAGTATAATGGAGTATTTAAAACATCAAAACATATATGTATCATATGGAGTATATGTTTCAGTTCACATAAA
AATCCTACTGAGTGGTGAGCAAACCTCCCGCTCGGGGGCTTAGCTGCAGTCTCGTACTCGCCTAAGTTTGAAAAAATCCT
ACCGAGTGGAGAGCAATCCTCCCACTCGAGGGGGCTTAGCTACAGTCCCGTACTCGCCTAAGTTTGAAAAATCCTACCGA
GTGGTGAGCAAACCTCCCACTCGGAGGCTTAGCTGCAGTCTCATACTCGCCTAAGTTTGGAAAAATCCTACCGAGTGGAG
AGCGATCCTCCCACTCGGGGGCTTAGTTGCAGTCCCATGCTCGCCTAAGTTTGGAAAACCTTACCGGGTGGTTGACAGAA
ACGTCAAGGCCATTGCGGAGTGCCTTGCTGATGAGCTGATCAATGCTACTCAAGGATCACCCGATCGGTCGACTGAAACG
TCAAGACCATTACTGAGTGCCTCGCTGATGAGCTGATCAATGCTACTCAAGGAT
>chr2B_1
CTCCTTCCGCCCGATAACTCCAAAAGGAAACTGTCACTTTAACAGAGTCTCTGACTTTTTGGATGACAATGGCACATGGA
ATCAAGCTTGGCTGAGGGAGTTCTTTTGGCAAATGGATGTTGATCACATCCTGAAAATTAGAACTTCGCCTCGACAACGT
GAGGACTTTTTGGCCTGGTTTCCGGAAAAGAGGG--GGGTTCACGGTGAGAAGTGCATGCAAACTGGCTACACATGATCA
TAATGTTATTACGGCAAATGGTGCTTCAAGTACTGCCCCAGATGGGAACCGTTCGGGATGGAACTACATCTGGAAGTCCG
GGGTTCCTCAGAAAATGAAGATCAATGCATGGAGATGTGTAACGGGGACTATGGAAACACAGAGTTGCAAGGCTTACAGA
CATCTGACGACGCGCTCAACCTGTCATATAT---GTGGGATGGAGGAGGAGGACTCATTCCATGCCTTAGTAACTTGCTC
ACATGCACGAAGCCTCTGGATTAACATGCGTCGCCGCTGGCCACTCCCGGAGGATGATTTCCTGATTCATGATGGGAAAA
AATGGCTAACTTCTTTGCTGGCGAAGTGTACGACCGATGTCCGAGATATGCTGCTTATGTTTATTTGGCGGATTTGGCAG
CTCCGCAACGACTTGACCCATGGAAAGGAGGTCCCTCCTGTACCAGCCACCGTCGACTTCCTCG---ACAGTTATTACAA
GTCCATAAAGCTTTCTGCATGTCACACTACGGAGGAGATTATTAAAGGAAAAATGTCAACCAGGGAGAAGTCGTTGCCAG
AGCAAGGGGGCAGGGTCATATCGACTCCCTGGCCGGCGCCGCAGCTAGGCCGGGTGGCCCTGTCAGTTGATGGCTCGTTC
CTGAAGGAGGATGGCTCTGCAGCTGTCGGTATGGTGCTTAGAAACGACAAAGGAGATGTTCTAATGGCAGCCTACCGCTT
CATCTTCTACTGCAATGACCCGCTGGAAGCAGAACTACATGCGATCATGCAAGGTTTGGCCCTAGCAATACAACACTCTG
ACTTACCGGTGGTGGTTCAATCGGACTCGGCTGAAGCTTTGTCTAGCTTGACAAATGATGCACTTCGTCGTTCGGCGTAT
GGACAGATCGTCATGGAGATTAAAGCACTTCTAGGTACTAGGGAGTTTTTTCCTCAAAAGATTACTAGACTTCAAAATAG
AGTTGCCGATCGGTTGGCTAAGTATAGTCGCACCGAGCGTGCCACGGTTGTCTGGCTGGGCTCGGTTCCACCTTGTATTG
AGGACTTGTGGCCTCTCGACTGTAACTCTATAACTCTTCAATAAAGCTCCCTTTGCCCTCGCAAAAAAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr6B_3
CTTT---CGTCCGATCACTCCGAAGGGAAACTGTCGCTTCAACAGGGTTTCTGAATTTTTGGATGACAATGGTGCATGGA
ATCATGCTTGGCTGAGGGGGTTCTTTTGGCCGATGGATGTTGATCACATCCTGAAAATCAGAACTTCGCCTCGCCAACGA
GATGACTTCTTGGCCTGGTATCCGGAAAAAAGTGGTGGGTTCACGGTGAGAAGTGCATACAAGTTGGCTACACATGATCA
TAATGTTGTGACGGCTAATGGGGCTTCGAGTATTGCCCCGGGAGGGAACCGTTCGGGGTGGAACTACATCTGGAAGTCCG
GGGTTCCTTAGAAAATGAAGATCAATGCATGGAGATGTGTGACGAGAACTATGGCAACACAGAGTTGCAAGGCCTACAGA
CACTTGGCGACGCGCTCAACCTGTCAGATAT---GCGGGGTGGAGGAGGA---CTCATTCCATGCCTTGATAACTTGTTC
AGATGCACGAACGCTCTGGACAAACATGCGTCGCCGCTGGCCACTTCCGGAGGATGATCTCCTGATCCATGATGGGAAAG
AATGGTTAACTTCATTGCTGGCGAAGTGTTCGACCAACGTCCAAGATATGCTGCTTATGTTTATTTGGCGGATTTGGCAG
CTCTGTAATGACTTGATCCACGGAAAGGAGGTTCCTCCTGTCCCAGCCACCGTCGAATTCCTAG---ACAGTTACTACAA
GTCCATAAAGCTTGTCGCGTGCTACACTACGGAGGAGATCATTAAAGGAAAAATGTCAACCGGGGAGGTGTCATCGCCAG
ACCAAGGGGGCAGGGCCACTACGGCTCCCTGGCCGGCACCGCAGCTTGGCAGGGTGGCTCTATTAGTTGATGGCTCATTC
CTGCAGGAGGATGGCTCTGCAGCTGTCGGTATGGTGCTTCGGAACGACAAAGGAGAGGTCCTAATGGCAGCCTACCGCTT
CATCTTATACTGCAATGACCCGCTGGAAGCAGAATTACATGCGATCATGCAGGGTTTGGCCCTAGCAATACAACATTCTG
ACTTACCGGTGGTGGTTCAAACGGACTCTTCTGAAGCCTTGTCTAGCTTGACAGATGATGCACTTCTTCGTTCGGCGTAT
GGACAAATCGTCATGGAGATCAAAGCACTTCTAGGTACTAGGGAGTTTTTTCCTCAAAAGATTAGTAGACTTCAAAATAG
AGTTGCCGATCGGTTGGCTAAGTATAGCCGCACCGAGCGTGCCATGGCTGTTTGGCTTGGCTCGTTTCCACCTTGTATCG
AGGATTTGTGGCCTCTCGACTGTAACTCTATAACTCTGCAATAAA-CTCCCTTTACCCTCGCACAAAAAA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chrUn_29
----------------------------AACTGTCGGTTCCATAGGGTCTCGGACTTCTTAGACGATAATGGTGCGTGGA
AGCAGGATCGTTTAAGGGAATTCTTTTGGCAGATGGATATTGACCACATTCTGAAAATAAGAACTTCGCCTCGTCAGAGA
GATGATTTCCTGGCATGGTACCCGGAGAAGAGTGGGGTGTTTATGGTGAGAAGTGCCTACAAGTTGGCTACATGTGATCA
TAATTCTGCCGCTGATAATGGCGCGTCGAGCACAGTACCAGATGGAAACCAATCGGGGTGGAACTATGTGTGGCGGTCCG
GGGTACCGCAGAAGATGAAGATCCATGCGTGGAGATGTGTATCAGGAACTCTGGCAACACAGAGTTATAAAGCCTTCCGC
CACTTGGCAACGCGCTCAACCTGCTTGCTTTGCAGCGTCGAGGAGGAGGA---CTCGTTCCATGCTATGGTAACCTGCCC
ACATGCGAGAATGCTCTGGTCAAATATGCGCCTTCGGTGGCCACTCCCAGACGACGATCTTCTCATCCATGATGGAAGGG
AGTGGCTGCTCACCCTGCTGTCGAAATGCTCGTCGGACGTTCGAGACATGCTGATTATGTTTCTCTGGCGGATTTGGCAG
CTCCGGAATGATCTGACGCACGGGAAGGAAACGCCCCCTGTGTCAGCCACTGTCGAATTTCTGG---ACAGTTACTACGT
GTCTATAAGACTCGCTGCGTGCTACCCCATGGAGGAGATCATTAAAGGTAAGATGCCGACCTCGGCGATGGCGCTGCCAA
CCCCCAGAATCATGCCATCGGCGGACCCCTGGCCGGCTCCGCCGCTTGGTAGGCTGGCGCTATCTGTCGACAGTTCCTTT
CTGCAGGAGGATGGCTCTGCGGGCATCGGTATGGTGCTCAGGAATGACAGAGGGGAGATTCAAATGGCAGCCTACCGGTT
TATCTTCCATTGCAATGACCCTCTTGAGGCGGAATTGCATGCGATCATGCAGGGGATGGCCCTTGCATTACAACATTCTG
CGCTACCGGTGGTGGTTCAAACGGATTCCGCTCAAGCATTGTCTAGCTTGACAAATGATGCACTCCTTCGCTCGGCCTAT
GGACAGATCATCATGGAGATCAAGTCACGTTTAGATAATAGGGAGTTTTTTCCTCAAAAGATTAGTAGACTTCAAAATAG
AGTTGCCGATCGGTTAGCTAAGTATAGCCGCACCGAGCGGGCCACGGCAGTTTGGCTTGGTTCAGTTCCACCATGTATCG
AGGATTTGTGGCCTCTCGACTGTAACTCTATTCCTATGCAATAAA-CTCCCTTTATCCCCGCAAAAAAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr3B_78
-----------------------------------------------------------------------------GGA
GTTATGATCGTCTGCGGGAGTTCTTTTGGGACATGAATATTGAACACATTCTGAAAATTAGAACCTTGTCGCGCCAACGA
GATGATTTCCTATCGTGGTACCCGGAGAAGTGTGGTCTGTTTACGGTGAGAAGTGCTTATAAACTGGCTACATCTGATCA
CAATAATGCTTTTGCCAACGGTGCTTCTAGCATGAATTCGGAGGGGAACCGAGCCTGCTGGAACTTTATCTGGAAGTCTG
TAGTGCCCCAGAAGATGAAAATTACTGCGTGGAGGTGCGCGACAGGAACTTTGGCAACACAACAATGCCAATCTTACAGA
CACCTGTCAACAAGATCTACTTGTCCGTTCTGTGGTATTGAGAAAGAGCA---CTCGTTTCAGGCACTGATTGCATGCCT
ACATGTAAGAATTTTGTGGACAAACATGCGTCAAAGATGGCCACTCCCAGGGGATGATCTTCTAATTTGTGATGGGAAAG
AATGGCTTATCTCCTTATTGGCCAGGTGATCTGAAGATGTTCGTGATATGCTCATCTTGTTTATTTGGCGGATCTGGCAA
CTGCGTAATGACATGACTCATGGGAAGGAAGTTCCACCGGTACCAGCCACCGTTGAATACCTGG---ATAGCTACTATAA
GTCCATCAAGTTAGCTGGACGATTTTCAATTGAAGATATTCTAAAAGGGAAAATGCCTACTTCGGGCTTGGCGTTGCCGG
CCCGACGGGAAAAGTGTCCTGCAGCTCCCTGGCCGGCCCCGGCGCAGGGCATTCTTGCTCTTTCGGTTGATGGATCCTTT
CTTCGTGAGGATGGATCTGCTGCTGTGGGGATGGTGCTTGGGAATAACAAGGGTGAGATCCTGATGGCCGCGTACCGGTA
CATCTTTCATTGTAATGACTCACTTGAAGCAGAACTACATGCGATCATGCAAGGTATGGCCTTGTCCATTCAGCACTTTG
ATCTTCCGGTGGTGGTGCAAACAGATTCCTCTGAAACTCTCTTCAGTTTAACAAATGGGGCGCTTCTTCGCTCGGGGTAT
GGCCAGATTGTCTTGGAGATCAAGGATCTTCTTGGTACTAGGGAGTTTTATCCTTAATAATCGT-----TTCCAAAATAG
AGTTGCCGATTGTTTGGCGAAATATAGCCGCTCCGAACGTGCTACGGCTGTGTGGCTAGGTTCGGTTCCACCATGTATCG
AGGATGTGTGGCCTCTCGACTGTAACTCTATTTCTATGCAATAAA-CTCCCTTTACCCCCGCAAAAAAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr4A_88
--------------------------------------------------------------------------------
-------TCGGCTGAGGGAGTTCTTTTGGCAAATGGATGTTGATCACATCCTGAGAATGAGAACTTCGCCTCGCCAACGT
GAGGACTTTTTGGCCTGGTTCCCGGAAAAGAGTGGGGGGTTTACGGTGAGGAGTGCATACAAGCTGGCTACATATGATCA
CAATGTTATTACAACAAATGGTGCCTCGAGTACTGCCCCAGATGGGAACCGGTCAGGATGGAACTACATCTGGAAGTCTA
GGGTTCCTCAGAAAATGAAGATCAACACATGGAGATGTGTGACGGGGACTTTGGCAACGCAGAGTTGCAAGGCATACAGA
CATCTGACGACACGATCAACCTGTCAGATTTGTGGGGTGGAGGAGGAGGA---CTCATTTCATGCCTTGGTGACTTGCTC
ACATGCACGTTTGCTCTGGATTAACATGCCTA-CCGCTGGCCACTCCCGGAGGATGATTTCTTAATCCATGATGGGAGAG
AATGGTTAACTACTTTACTGGCGAAGTGCTCGACCGATGTCCAGGACATGCTACTTATGTTTATTTGGCGGATTTGGCAG
CTACGTAACGACCTGATCCATGGGAAGGAGATCCCTCCTATTCCAGCCCCTGTCAAATTCCTTGACAACAGTTACTACAA
GTCCATTAAGCTGGCTGCATGCTACACTACGGAGGAGATCATTAAAGGAAAAATGTCAACCGGG-AGATGCCGATACCAG
ACCAAAAGGGCAGGGTCATATCGTCTCCATGGCCGGTGCCTCAGCCAGGTAGGGTGGCTCTATCAGTTGATGGCTCGTTC
CTGAAGGAGGATGGATCTACTGCTGTTGGTATGGTGCTTAGAAATGACAAAGGAGATGTCCTAATGGCTGCCTACCGTTT
CATCTTCTATTGCAATGACCCGCTGGAAGCAGAACTACATGCGATCATGCAAGGTTTGGCCTTAGCACTACAACACTCTG
ACTTGCCGGTGGTGGTTCAGACGGACTCGTCTGAAGTTTTGTCTAGCTTCACAAATGATGCACTTATTCATTCGGCGTAT
GGACAGGTCGTCATGGAGATCAAAGCACTTCTTGGTACCAGGGAGTTTTTTCCTCAAAAGATTACTAGACTTCAAAATAG
AGTTGCCGATCGGTTGGCTAAGTATAGCCGCACCGAGCGTGCCACGGCTGTCTGGCTGCGCTCGGTTCCACCTTGTATTG
AGGACTTGTGGCCTCTCGACTGTAACTCTATAACTCTTTAATAAA-CTCCCTTCACCCTCACAAAAAAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr3D_1341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AACTAAGATTACC
ACCAGGCTTCGACAACACAACATATCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAATTATATTCTTGTGTTTGTGATATTTAATAAACGTTTATGTGTTACAAA-AAA-G--GTGTGTGGCATTTAAAAAA
ATGTTTAAACATTGTAAACAACATTTGTGTAATTAAAA-ATGATATGTTGCATTTTAAAAATGTTCATGCATTCCAAAAA
AACTGGTCATGACATTTTTCAAATGCCTATACAATGTATAAAAGTGTTTGTGGAGCTTAAAAATGTTTCGTACCATCCAA
AAATATTAAAAACATAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAAGAAA-A-TGTTTATCATATGTTTAAAAAGTAT
TAAGCAT---AT---TT--TTTTAAATACTCCAAACATAGATGTGTACTAGAGTATTTAAAA-----TATATGTGTATCA
AAACATAGATGTATACTGGAGTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATATTTCAATACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr3A_1341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AACTAAGATTACC
ACCAGGCTTCGACAACCCAGCATGTCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAATTATATTCTTGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAA-AAAAGAGGTGTGTGACATTG-AAAAA
ATGTTTAAACATTGTAAACCACATTTATGTAATTAAAA-ATGATACGTTGCATTTTAAAAATGTTCATGCATTA-AAAAA
AACAGGTCATGACATTTTTGAAATGCCTATACAATGTATAAAATTGTTCGTGTAGCTTAAAAATGTTTTGTAACATCAGA
AAATGTTAAAAACATATTTAAAAAAAGTTTCAAAACTTGTATTTGAAA--AA-A-TGTTAATCATATGTTTAAAAAGTAT
TAAGCAT---TT---TT--T-TAAAATACTCCAAACATAGATGTATACTGGAGTATTTAA-A-----TATATTTGTATCA
AAACATAGATGTATACTGGAGTATTTCAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCAACACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr2B_1341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AACTAAGATTACC
ACCGGGCTTCGACAACACAACATATCCAAATGGGATAAATACTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAAA-----TCTTGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAA-AAAAG--GTGTGTGGCATTTAA--AA
AAGTTTAAACATTGTAAACCACATTTGTGTAATTAAAA-ATGATACGTTGCATTTTAAAAATGTTCATGCATTCCAAAAA
AACTGGTCATGACATTTTTTAAATGCCTATAAAATGTATAAAACTGTTTGTGTAGCTTAAAAATGTTTCGTACCATCCAA
AAATGTTAAAAACATAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAA--AA-AATGTTTATCATATGTTTGAAAAGTAT
TAAGCATATATT---TT--T-TGAAATACTCCAAACATAGATGTATACTGGAGTATTTAA-AATATA----TGTGTATCC
ACACATAGATGTATACTGGAGTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCAATACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr5A_1341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AACTAAGATTACC
ACCGGGTTTTGAAAACACAACATATCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAAT---ATTCTTGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAAAAAA-G--GTGTGTGACATTTAAAAAA
ATGTTTAAACATTGTAAACCACATTTGTGTAATTAAAA-ATGATACGTTGCATTTTTAAAATGTTTGTGCATTCCAAAAA
AACTGGTCATGACATTTTTTAAATGCCTATACAATGTATAAAACTGTTTGTGTAGCTTAAAAATGTTTGGTACCATCCGA
AAATGTTAAAAACATAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAA--AA-AATGTTAATCATATGTTTAAAAAGTAT
TAAGCAT---AT---TT--T-TTAAATACTCCAAACATAGATGTATACTGGAGTATTTAA-AATATATATGTGTGTATCA
TAACATAGATGTATACTGGAGTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCCATACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr2A_1341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AACTAAGATTACC
ATCGGGTTTCGAAAACACAACATATCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAATTATATT-TTGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAA-AAA-G--GTGTGTGACATTTAGAAAA
ATGTTTAAACATTGTAAACCACATTTGTGTAATTAAAA-ATGATACGTTGCATTTTAAAAATGTTCGTGCATTCCCAAAA
AACTGGTCATGACATTTTTTAAATGCCTATACAATGTATAAAGCTGTTTGTGTAGCTTAAAAATGTTTTGTACCATCCGA
AAATGTTAAAAACAAAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAA--AA-AATGTTAATCATATGTTTCAAAAGTAT
TAAGCAT---ATACTTT--T-TAAAATACTCCAAACATAGATGTATACTGGAGTATTTAA-AATATATATATATGTATCA
TAACATAGATGTATACTGGAGTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCAATACACATAAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_1341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AACTAAGATTACC
ACCGGGTTTTGAAAACACAACATATCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAAT---ATTCTTGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAA-AAAAG--GTGTGTGACATTTAAAAAA
ATGTTTAAACATTGTAAACCACATTTGTGTAATTAAAA-ATGATACGTTGCATTTTTAAAATGTTCGTGCATTCCAAAAA
AACTGGTCATGACATTTTTTAAATGCCTATACAATGTATAAAATTGTTTGTGTAGCTTAAAAATGTTTGGTACCATCCGA
AAATGTTAAAAACATAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAA--AA-AATGTTAATCATATGTTTAAAAAGTAT
TAAGCAA---TC---TT--T-T-AAATACTCCAAACATAGATGTATACCGGAGTATTTAA-AATATATATGTGTGTATCA
TAACATAGATGTATACTGGAGTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCCATACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr6D_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CTAAGATTACC
ACCGGGCTTAGACAACACAACATATCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAATTATATTC-TGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAA-AAATG--GTGTGTGACATTTAAAAAA
ATGTTTAAACATTGTAAACCAGATTTGTGTAACTAAAA-ATGATACGTTGCATTTTAAAAATGTTCATGCATTCCAAAAA
AACTGGTCATGACATTTTTTAAATGCCTATACAATGTATAAAACTGTTTGTGTAGCTTTAAAATGTTTCGTACCATCCGA
AAATGTTAAAAATATAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAA--AA-A-TGTTAATCATATGTTTAAAAAGTAT
TAAGCAT---AT--TTT--T-TAAAATACTCCAAACATAGATGTATACTGGAGTATTTAA-AATATA----TGTGTATCA
AAACATAGATGTATACTGGAGTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCAATACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr2D_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CTAAGATTACC
ACCGGGCTTAGACAACACAACATATCCAAATGGGATAAATATCTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAAAATTATATTC-TGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAA-AAACG--GTGTGTGACATTTAAAAAA
ATGTTTAAACATTGTAAACCAGATTTGTGTAACTAAAA-ATGATACGTTGCATTTTAAAAATGTTCATGCATTCCAAAAA
AACTGGTCATGACATTTTTTAAATGCCTATACAATGTATAAAACTGTTTGTGTAGCTTTAAAATGTTTCGTACCATCCGA
AAATGTTAAAAATATAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAA--AAAA-TGTTAATCATATGTTTAAAAAGTAT
TAAGCAT---AT--TTT--T-T-AAATACTCCAAACATAGATGTATACTGGAGTATTTAA-AATATA----TGTGTATCA
AAACATAGATGTATACTGGATTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCAATACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr2D_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CTAAGATTACC
ACCGGGCTTAGACAACACAACATATCCAAATGGGATAAATATTTTTCATGTTGTTATTCCTTCTTGTTCTATGTAAGAAA
AAA-ATTATATTC-TGTGTTTGTGATATTTAATAAATGTTTATGTGTTACAAA-AAACG--GTGTGTGACATTTAAAAAA
ATGTTTAAACATTGTAAACCAGATTTGTGTAACTAAAA-AAGATACGTTGCATTTTAAAAATGTTCATGCATTCCAAAAA
AACTGGTCATGACATTTTTTAAATGCCTATACAATGTATAAAACTGTTTGTGTAGCTTTAAAATGTTTCGTACCATCCGA
AAATGTTAAAAATATAGTTGAAAAAAGTTTCAAAACTTGTATTTGAAA--AAAA-TGTTAATCATATGTTTAAAAAGTAT
TAAGCAT---GT--TTT--T-T-AAATACTCCAAACATAGATGTATACTGGAGTATTTAA-AATATA----TGTGTATCA
AAACATAGATGTATACTGGAGTATTTAAAACATCAAAACATATGTGTATCATATGGAGTATATGTTTCAATACACATAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>SNPs
---------S--S---------S--S-S--S-----S------S----S---S-----S-S-------------------
------S---S----------------------------------------------------------S--S-------
--S--------------------S--------------------------------------------------------
-------------------------S----------------------------SS-------------S----------
S--------------------------S----------------------------------S-----------------
-----S-----S-----S-----------S-----------S-----S------------------------------S-
S--------------S-----------------------------------------------S----------------
---S----------------------------------------------------------------------------
--------------------------------------S----S------------S-----------------------
------------------------------------------SS-------------------S--------S-------
-SS-----S-----S---------S--------------S------------S---------------SS----------
-----S----------S-------------------------SSS-------------------------S---S-----
--------------------------------------------------------------------------------
---------------S------------S--S---------------------------S----------------S-S-
--S---------------------------------------------------------------S-------------
-----------------------------S-------------------------------------------------S
------------------------------------------S-------------------------------------
----------SS--------------------------------------------------------------------
---S---------------------S-------------------------------------S----------------
---S---------S----S--S---------S------S--------S--------S-----------------------
-------------------------SS-----------------------S--S--------S--------S---S----
----SS-S--S-------------------------------------S---------------------------S---
-----------------SS-----------S------S---SS--------------------S------S---S-----
---------S-----S---------------------------S-------------------------S-S--------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_544
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TCCCAGGGGACGATCTTCTT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2289
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CTCAAGGATCACCCGATCGG------------
------------------------------------------------------
