Multiple sequence alignment - TraesCS6B01G263500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G263500 chr6B 100.000 3021 0 0 1 3021 474430228 474427208 0.000000e+00 5579.0
1 TraesCS6B01G263500 chr6D 94.696 1433 57 10 795 2211 307112708 307111279 0.000000e+00 2207.0
2 TraesCS6B01G263500 chr6D 93.834 746 30 7 66 795 307113554 307112809 0.000000e+00 1109.0
3 TraesCS6B01G263500 chr6D 82.776 389 27 21 2612 2989 307111110 307110751 8.130000e-81 311.0
4 TraesCS6B01G263500 chr6D 94.595 37 2 0 2539 2575 307110938 307110902 1.170000e-04 58.4
5 TraesCS6B01G263500 chr6A 93.883 1455 67 12 795 2236 443416496 443415051 0.000000e+00 2174.0
6 TraesCS6B01G263500 chr6A 90.818 795 43 18 7 795 443417367 443416597 0.000000e+00 1037.0
7 TraesCS6B01G263500 chr5D 98.780 82 1 0 2809 2890 449036162 449036243 2.430000e-31 147.0
8 TraesCS6B01G263500 chr5D 97.619 84 2 0 2809 2892 539649418 539649501 8.730000e-31 145.0
9 TraesCS6B01G263500 chr5D 97.590 83 1 1 2809 2891 10786134 10786053 1.130000e-29 141.0
10 TraesCS6B01G263500 chr5D 90.909 44 4 0 2532 2575 10786147 10786104 3.250000e-05 60.2
11 TraesCS6B01G263500 chr5B 98.795 83 0 1 2809 2891 548982512 548982431 2.430000e-31 147.0
12 TraesCS6B01G263500 chr5B 91.892 37 3 0 2539 2575 11083089 11083125 5.000000e-03 52.8
13 TraesCS6B01G263500 chr2A 93.069 101 6 1 2794 2893 617108003 617108103 2.430000e-31 147.0
14 TraesCS6B01G263500 chr2A 95.556 90 2 2 2802 2891 601729422 601729509 3.140000e-30 143.0
15 TraesCS6B01G263500 chr2A 91.892 37 3 0 2539 2575 601729423 601729459 5.000000e-03 52.8
16 TraesCS6B01G263500 chr5A 97.619 84 1 1 2809 2891 567921634 567921717 3.140000e-30 143.0
17 TraesCS6B01G263500 chr5A 95.506 89 3 1 2803 2891 8808374 8808461 1.130000e-29 141.0
18 TraesCS6B01G263500 chr5A 92.105 38 3 0 2538 2575 8808373 8808410 2.000000e-03 54.7
19 TraesCS6B01G263500 chr2B 92.683 82 6 0 524 605 555779623 555779704 5.290000e-23 119.0
20 TraesCS6B01G263500 chr2B 90.244 41 4 0 2631 2671 480941293 480941253 2.000000e-03 54.7
21 TraesCS6B01G263500 chr2D 89.873 79 8 0 524 602 474676808 474676886 5.330000e-18 102.0
22 TraesCS6B01G263500 chr1D 91.803 61 4 1 2612 2671 467611064 467611124 1.930000e-12 84.2
23 TraesCS6B01G263500 chr4A 92.683 41 3 0 2535 2575 595271650 595271690 3.250000e-05 60.2
24 TraesCS6B01G263500 chr4D 90.698 43 3 1 2533 2575 8077301 8077260 4.210000e-04 56.5
25 TraesCS6B01G263500 chr4D 100.000 28 0 0 2548 2575 8075291 8075264 5.000000e-03 52.8
26 TraesCS6B01G263500 chr4B 91.892 37 3 0 2539 2575 15414456 15414492 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G263500 chr6B 474427208 474430228 3020 True 5579.00 5579 100.00000 1 3021 1 chr6B.!!$R1 3020
1 TraesCS6B01G263500 chr6D 307110751 307113554 2803 True 921.35 2207 91.47525 66 2989 4 chr6D.!!$R1 2923
2 TraesCS6B01G263500 chr6A 443415051 443417367 2316 True 1605.50 2174 92.35050 7 2236 2 chr6A.!!$R1 2229

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
481 522 0.043485 GGGGAGGAGGAGAAGAAGGT 59.957 60.0 0.0 0.0 0.0 3.5 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2440 2605 0.037882 CTCGTGTGACCATGACAGCT 60.038 55.0 0.0 0.0 33.12 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 42 4.704057 GGATTTCAAATCTCACCTCAAGCT 59.296 41.667 10.01 0.00 0.00 3.74
47 52 1.374758 CCTCAAGCTGTGACCGTCC 60.375 63.158 0.00 0.00 31.13 4.79
48 53 1.734477 CTCAAGCTGTGACCGTCCG 60.734 63.158 0.00 0.00 31.13 4.79
49 54 2.029073 CAAGCTGTGACCGTCCGT 59.971 61.111 0.00 0.00 0.00 4.69
50 55 2.022129 CAAGCTGTGACCGTCCGTC 61.022 63.158 0.00 0.00 42.33 4.79
56 61 2.872557 TGACCGTCCGTCATCGTC 59.127 61.111 0.00 0.00 46.80 4.20
58 63 1.513586 GACCGTCCGTCATCGTCAC 60.514 63.158 0.00 0.00 41.54 3.67
59 64 2.202570 CCGTCCGTCATCGTCACC 60.203 66.667 0.00 0.00 35.01 4.02
60 65 2.564458 CGTCCGTCATCGTCACCA 59.436 61.111 0.00 0.00 35.01 4.17
61 66 1.800315 CGTCCGTCATCGTCACCAC 60.800 63.158 0.00 0.00 35.01 4.16
62 67 1.445582 GTCCGTCATCGTCACCACC 60.446 63.158 0.00 0.00 35.01 4.61
96 101 2.356913 CACCACGCACACCGATCA 60.357 61.111 0.00 0.00 41.02 2.92
178 184 2.171003 CCAACCCCAGACTTTCCATTC 58.829 52.381 0.00 0.00 0.00 2.67
185 191 3.094572 CCAGACTTTCCATTCCTTGCAT 58.905 45.455 0.00 0.00 0.00 3.96
195 201 2.578163 TTCCTTGCATCCGGAGCTCG 62.578 60.000 21.36 13.97 38.88 5.03
201 208 3.390521 ATCCGGAGCTCGCCAACA 61.391 61.111 11.34 0.00 37.59 3.33
208 215 0.459585 GAGCTCGCCAACAATCCGTA 60.460 55.000 0.00 0.00 0.00 4.02
211 218 1.722011 CTCGCCAACAATCCGTAGTT 58.278 50.000 0.00 0.00 0.00 2.24
215 222 1.673626 GCCAACAATCCGTAGTTCCGA 60.674 52.381 0.00 0.00 0.00 4.55
217 224 1.652124 CAACAATCCGTAGTTCCGACG 59.348 52.381 0.00 0.00 40.02 5.12
221 228 1.012841 ATCCGTAGTTCCGACGAGTC 58.987 55.000 0.00 0.00 42.98 3.36
223 230 0.179205 CCGTAGTTCCGACGAGTCAC 60.179 60.000 0.00 0.00 42.98 3.67
224 231 0.179205 CGTAGTTCCGACGAGTCACC 60.179 60.000 0.00 0.00 42.98 4.02
225 232 0.877071 GTAGTTCCGACGAGTCACCA 59.123 55.000 0.00 0.00 0.00 4.17
266 280 1.601759 GAAGCAGCAGGACAAGCCA 60.602 57.895 0.00 0.00 40.02 4.75
304 342 4.932105 GGCCACCACCAAGCCCAA 62.932 66.667 0.00 0.00 41.00 4.12
305 343 3.305516 GCCACCACCAAGCCCAAG 61.306 66.667 0.00 0.00 0.00 3.61
306 344 2.520458 CCACCACCAAGCCCAAGA 59.480 61.111 0.00 0.00 0.00 3.02
307 345 1.152567 CCACCACCAAGCCCAAGAA 60.153 57.895 0.00 0.00 0.00 2.52
308 346 1.181098 CCACCACCAAGCCCAAGAAG 61.181 60.000 0.00 0.00 0.00 2.85
309 347 1.531602 ACCACCAAGCCCAAGAAGC 60.532 57.895 0.00 0.00 0.00 3.86
310 348 2.278330 CCACCAAGCCCAAGAAGCC 61.278 63.158 0.00 0.00 0.00 4.35
311 349 1.228675 CACCAAGCCCAAGAAGCCT 60.229 57.895 0.00 0.00 0.00 4.58
312 350 1.228675 ACCAAGCCCAAGAAGCCTG 60.229 57.895 0.00 0.00 0.00 4.85
313 351 2.643232 CCAAGCCCAAGAAGCCTGC 61.643 63.158 0.00 0.00 0.00 4.85
314 352 2.283460 AAGCCCAAGAAGCCTGCC 60.283 61.111 0.00 0.00 0.00 4.85
315 353 3.150903 AAGCCCAAGAAGCCTGCCA 62.151 57.895 0.00 0.00 0.00 4.92
316 354 2.601367 GCCCAAGAAGCCTGCCAA 60.601 61.111 0.00 0.00 0.00 4.52
317 355 2.643232 GCCCAAGAAGCCTGCCAAG 61.643 63.158 0.00 0.00 0.00 3.61
401 439 2.981909 TCCAACGCGGACGAGTCT 60.982 61.111 12.47 0.00 43.93 3.24
443 481 2.582498 CCGATCGTCGTGAAGGCC 60.582 66.667 15.09 0.00 38.40 5.19
481 522 0.043485 GGGGAGGAGGAGAAGAAGGT 59.957 60.000 0.00 0.00 0.00 3.50
813 955 2.184579 GTTCCGGCGAGGGAGAAG 59.815 66.667 9.30 0.00 41.52 2.85
1050 1192 3.861886 GCAATAACAACAGCAGCACCAAT 60.862 43.478 0.00 0.00 0.00 3.16
1057 1199 1.073763 ACAGCAGCACCAATACCAAGA 59.926 47.619 0.00 0.00 0.00 3.02
1099 1242 3.731717 GCAAAGTTCGAATTTTAACGCCA 59.268 39.130 16.97 0.00 0.00 5.69
1102 1245 6.563196 GCAAAGTTCGAATTTTAACGCCATTT 60.563 34.615 16.97 0.00 0.00 2.32
1119 1262 4.023536 GCCATTTCTTTTGTAACTCCACGA 60.024 41.667 0.00 0.00 0.00 4.35
1128 1271 7.496591 TCTTTTGTAACTCCACGACTTAACATT 59.503 33.333 0.00 0.00 0.00 2.71
1171 1316 6.931281 TCTTCAAACTGATTCAGAAATCGACT 59.069 34.615 20.33 0.00 43.61 4.18
1178 1323 7.776107 ACTGATTCAGAAATCGACTGAGATTA 58.224 34.615 20.33 0.00 43.61 1.75
1237 1382 4.384056 CAAAGGAGCAGAGTTCTCAGAAA 58.616 43.478 0.00 0.00 32.38 2.52
1258 1403 1.144936 GAAGGCGGAGGAGACCATG 59.855 63.158 0.00 0.00 0.00 3.66
1266 1411 2.185310 GAGGAGACCATGGTTGCGGT 62.185 60.000 20.85 2.93 38.56 5.68
1270 1415 1.599518 GACCATGGTTGCGGTGTCA 60.600 57.895 20.85 0.00 34.99 3.58
1276 1421 1.367840 GGTTGCGGTGTCAGAGACT 59.632 57.895 0.00 0.00 33.15 3.24
1282 1427 0.375454 CGGTGTCAGAGACTAGAGCG 59.625 60.000 0.00 0.00 33.15 5.03
1285 1430 0.034960 TGTCAGAGACTAGAGCGCCT 60.035 55.000 2.29 3.28 33.15 5.52
1549 1694 1.819288 GACCTCAACTCCTCATCGTCA 59.181 52.381 0.00 0.00 0.00 4.35
1597 1742 2.963371 GTCGACGACAAGGCCTCT 59.037 61.111 22.66 0.00 32.09 3.69
1829 1974 1.918293 CAGGTCCCTAGCCACCACA 60.918 63.158 10.19 0.00 34.80 4.17
2043 2188 3.135348 TGAGGGAGATTAGGCAAGATGTG 59.865 47.826 0.00 0.00 0.00 3.21
2052 2197 0.737219 GGCAAGATGTGTGAGATGGC 59.263 55.000 0.00 0.00 0.00 4.40
2099 2247 1.272781 CGCTTTCACGGTCAGATCTC 58.727 55.000 0.00 0.00 0.00 2.75
2100 2248 1.402852 CGCTTTCACGGTCAGATCTCA 60.403 52.381 0.00 0.00 0.00 3.27
2120 2268 5.176590 TCTCAAGTGTTTGTTTTTGTGTTGC 59.823 36.000 0.00 0.00 35.73 4.17
2122 2270 3.643763 AGTGTTTGTTTTTGTGTTGCGA 58.356 36.364 0.00 0.00 0.00 5.10
2125 2273 3.181526 TGTTTGTTTTTGTGTTGCGATGC 60.182 39.130 0.00 0.00 0.00 3.91
2126 2274 2.284263 TGTTTTTGTGTTGCGATGCA 57.716 40.000 0.00 0.00 36.47 3.96
2128 2276 3.193263 TGTTTTTGTGTTGCGATGCATT 58.807 36.364 0.00 0.00 38.76 3.56
2129 2277 3.244814 TGTTTTTGTGTTGCGATGCATTC 59.755 39.130 0.00 0.00 38.76 2.67
2160 2316 8.718102 ATGTAGTCTTGCTAACGTTATCAATT 57.282 30.769 21.13 13.76 0.00 2.32
2162 2318 9.642327 TGTAGTCTTGCTAACGTTATCAATTTA 57.358 29.630 21.13 12.73 0.00 1.40
2167 2323 7.820386 TCTTGCTAACGTTATCAATTTAGACCA 59.180 33.333 21.13 0.80 0.00 4.02
2168 2324 8.500753 TTGCTAACGTTATCAATTTAGACCAT 57.499 30.769 18.02 0.00 0.00 3.55
2169 2325 7.915508 TGCTAACGTTATCAATTTAGACCATG 58.084 34.615 8.76 0.00 0.00 3.66
2170 2326 6.851330 GCTAACGTTATCAATTTAGACCATGC 59.149 38.462 8.76 0.00 0.00 4.06
2171 2327 7.254795 GCTAACGTTATCAATTTAGACCATGCT 60.255 37.037 8.76 0.00 0.00 3.79
2172 2328 9.256477 CTAACGTTATCAATTTAGACCATGCTA 57.744 33.333 8.76 0.00 0.00 3.49
2192 2353 4.457257 GCTATCATTATCTGGGAGCAAACC 59.543 45.833 0.00 0.00 34.76 3.27
2211 2372 3.971245 CCTGTATCCTCTATTCAGGCC 57.029 52.381 0.00 0.00 43.65 5.19
2213 2374 3.260380 CCTGTATCCTCTATTCAGGCCTG 59.740 52.174 27.87 27.87 43.65 4.85
2223 2384 3.947612 ATTCAGGCCTGTTGATCTGAT 57.052 42.857 31.58 11.17 36.34 2.90
2237 2398 2.996249 TCTGATGATCAGTTCTGGGC 57.004 50.000 20.82 0.00 44.58 5.36
2238 2399 2.475155 TCTGATGATCAGTTCTGGGCT 58.525 47.619 20.82 0.00 44.58 5.19
2239 2400 2.433604 TCTGATGATCAGTTCTGGGCTC 59.566 50.000 20.82 0.00 44.58 4.70
2240 2401 2.435069 CTGATGATCAGTTCTGGGCTCT 59.565 50.000 14.17 0.00 39.58 4.09
2241 2402 2.169978 TGATGATCAGTTCTGGGCTCTG 59.830 50.000 0.09 0.00 0.00 3.35
2242 2403 0.907486 TGATCAGTTCTGGGCTCTGG 59.093 55.000 0.00 0.00 0.00 3.86
2243 2404 1.198713 GATCAGTTCTGGGCTCTGGA 58.801 55.000 0.00 0.00 0.00 3.86
2244 2405 1.767681 GATCAGTTCTGGGCTCTGGAT 59.232 52.381 0.00 0.00 0.00 3.41
2245 2406 1.661463 TCAGTTCTGGGCTCTGGATT 58.339 50.000 0.00 0.00 0.00 3.01
2246 2407 2.832838 TCAGTTCTGGGCTCTGGATTA 58.167 47.619 0.00 0.00 0.00 1.75
2247 2408 2.501723 TCAGTTCTGGGCTCTGGATTAC 59.498 50.000 0.00 0.00 0.00 1.89
2248 2409 2.503356 CAGTTCTGGGCTCTGGATTACT 59.497 50.000 0.00 0.00 0.00 2.24
2249 2410 2.503356 AGTTCTGGGCTCTGGATTACTG 59.497 50.000 0.00 0.00 0.00 2.74
2250 2411 2.501723 GTTCTGGGCTCTGGATTACTGA 59.498 50.000 0.00 0.00 0.00 3.41
2251 2412 2.392662 TCTGGGCTCTGGATTACTGAG 58.607 52.381 0.00 0.00 45.11 3.35
2259 2420 4.829968 CTCTGGATTACTGAGCCATATGG 58.170 47.826 18.07 18.07 44.25 2.74
2260 2421 4.492646 TCTGGATTACTGAGCCATATGGA 58.507 43.478 26.47 3.50 44.25 3.41
2261 2422 5.096521 TCTGGATTACTGAGCCATATGGAT 58.903 41.667 26.47 20.59 44.25 3.41
2272 2433 3.261390 AGCCATATGGATCAGAGAAGAGC 59.739 47.826 26.47 4.83 37.39 4.09
2273 2434 3.261390 GCCATATGGATCAGAGAAGAGCT 59.739 47.826 26.47 0.00 37.39 4.09
2274 2435 4.262981 GCCATATGGATCAGAGAAGAGCTT 60.263 45.833 26.47 0.00 37.39 3.74
2275 2436 5.745476 GCCATATGGATCAGAGAAGAGCTTT 60.745 44.000 26.47 0.00 37.39 3.51
2276 2437 6.297582 CCATATGGATCAGAGAAGAGCTTTT 58.702 40.000 17.49 0.00 37.39 2.27
2277 2438 6.427547 CCATATGGATCAGAGAAGAGCTTTTC 59.572 42.308 17.49 8.93 37.39 2.29
2278 2439 5.697082 ATGGATCAGAGAAGAGCTTTTCT 57.303 39.130 18.77 18.77 40.02 2.52
2293 2454 3.425492 GCTTTTCTCGAGTTTCTGATGCC 60.425 47.826 13.13 0.00 0.00 4.40
2300 2461 2.159599 CGAGTTTCTGATGCCTTGCTTC 60.160 50.000 0.00 0.00 34.04 3.86
2302 2463 1.203287 GTTTCTGATGCCTTGCTTCCC 59.797 52.381 0.29 0.00 32.74 3.97
2303 2464 0.405198 TTCTGATGCCTTGCTTCCCA 59.595 50.000 0.29 0.00 32.74 4.37
2305 2466 1.006281 TCTGATGCCTTGCTTCCCATT 59.994 47.619 0.29 0.00 32.74 3.16
2306 2467 2.241941 TCTGATGCCTTGCTTCCCATTA 59.758 45.455 0.29 0.00 32.74 1.90
2307 2468 3.117398 TCTGATGCCTTGCTTCCCATTAT 60.117 43.478 0.29 0.00 32.74 1.28
2308 2469 2.960384 TGATGCCTTGCTTCCCATTATG 59.040 45.455 0.29 0.00 32.74 1.90
2309 2470 1.113788 TGCCTTGCTTCCCATTATGC 58.886 50.000 0.00 0.00 0.00 3.14
2310 2471 1.113788 GCCTTGCTTCCCATTATGCA 58.886 50.000 0.00 0.00 0.00 3.96
2312 2473 2.658285 CCTTGCTTCCCATTATGCAGA 58.342 47.619 0.00 0.00 36.75 4.26
2313 2474 3.025978 CCTTGCTTCCCATTATGCAGAA 58.974 45.455 0.00 0.00 36.75 3.02
2314 2475 3.448301 CCTTGCTTCCCATTATGCAGAAA 59.552 43.478 0.00 0.00 36.75 2.52
2315 2476 4.427312 CTTGCTTCCCATTATGCAGAAAC 58.573 43.478 0.00 0.00 36.75 2.78
2317 2478 4.025360 TGCTTCCCATTATGCAGAAACAT 58.975 39.130 0.00 0.00 0.00 2.71
2318 2479 4.467082 TGCTTCCCATTATGCAGAAACATT 59.533 37.500 0.00 0.00 0.00 2.71
2319 2480 5.046448 TGCTTCCCATTATGCAGAAACATTT 60.046 36.000 0.00 0.00 0.00 2.32
2320 2481 5.876460 GCTTCCCATTATGCAGAAACATTTT 59.124 36.000 0.00 0.00 0.00 1.82
2321 2482 6.372381 GCTTCCCATTATGCAGAAACATTTTT 59.628 34.615 0.00 0.00 0.00 1.94
2322 2483 7.624764 GCTTCCCATTATGCAGAAACATTTTTG 60.625 37.037 0.00 0.00 0.00 2.44
2323 2484 6.767456 TCCCATTATGCAGAAACATTTTTGT 58.233 32.000 0.00 0.00 0.00 2.83
2324 2485 6.873076 TCCCATTATGCAGAAACATTTTTGTC 59.127 34.615 0.00 0.00 0.00 3.18
2325 2486 6.875195 CCCATTATGCAGAAACATTTTTGTCT 59.125 34.615 0.00 0.00 0.00 3.41
2326 2487 7.148540 CCCATTATGCAGAAACATTTTTGTCTG 60.149 37.037 0.00 0.00 40.40 3.51
2327 2488 7.148540 CCATTATGCAGAAACATTTTTGTCTGG 60.149 37.037 0.00 0.00 38.34 3.86
2328 2489 4.734398 TGCAGAAACATTTTTGTCTGGT 57.266 36.364 0.00 0.00 38.34 4.00
2329 2490 4.681744 TGCAGAAACATTTTTGTCTGGTC 58.318 39.130 0.00 0.00 38.34 4.02
2330 2491 4.402155 TGCAGAAACATTTTTGTCTGGTCT 59.598 37.500 0.00 0.00 38.34 3.85
2331 2492 4.978580 GCAGAAACATTTTTGTCTGGTCTC 59.021 41.667 0.00 0.00 38.34 3.36
2332 2493 5.221126 GCAGAAACATTTTTGTCTGGTCTCT 60.221 40.000 0.00 0.00 38.34 3.10
2333 2494 6.433766 CAGAAACATTTTTGTCTGGTCTCTC 58.566 40.000 0.00 0.00 35.01 3.20
2334 2495 6.038603 CAGAAACATTTTTGTCTGGTCTCTCA 59.961 38.462 0.00 0.00 35.01 3.27
2335 2496 5.757850 AACATTTTTGTCTGGTCTCTCAC 57.242 39.130 0.00 0.00 0.00 3.51
2336 2497 5.041191 ACATTTTTGTCTGGTCTCTCACT 57.959 39.130 0.00 0.00 0.00 3.41
2337 2498 6.174720 ACATTTTTGTCTGGTCTCTCACTA 57.825 37.500 0.00 0.00 0.00 2.74
2338 2499 6.773638 ACATTTTTGTCTGGTCTCTCACTAT 58.226 36.000 0.00 0.00 0.00 2.12
2339 2500 6.652481 ACATTTTTGTCTGGTCTCTCACTATG 59.348 38.462 0.00 0.00 0.00 2.23
2340 2501 3.876274 TTGTCTGGTCTCTCACTATGC 57.124 47.619 0.00 0.00 0.00 3.14
2341 2502 2.807676 TGTCTGGTCTCTCACTATGCA 58.192 47.619 0.00 0.00 0.00 3.96
2342 2503 2.757314 TGTCTGGTCTCTCACTATGCAG 59.243 50.000 0.00 0.00 0.00 4.41
2343 2504 3.020274 GTCTGGTCTCTCACTATGCAGA 58.980 50.000 0.00 0.00 0.00 4.26
2344 2505 3.445450 GTCTGGTCTCTCACTATGCAGAA 59.555 47.826 0.00 0.00 0.00 3.02
2345 2506 4.081972 GTCTGGTCTCTCACTATGCAGAAA 60.082 45.833 0.00 0.00 0.00 2.52
2346 2507 4.713814 TCTGGTCTCTCACTATGCAGAAAT 59.286 41.667 0.00 0.00 0.00 2.17
2347 2508 4.763073 TGGTCTCTCACTATGCAGAAATG 58.237 43.478 0.00 0.00 0.00 2.32
2348 2509 4.467438 TGGTCTCTCACTATGCAGAAATGA 59.533 41.667 0.00 0.00 0.00 2.57
2364 2525 6.073276 GCAGAAATGATTGGCATATACGTGTA 60.073 38.462 0.00 0.00 35.78 2.90
2368 2529 4.627058 TGATTGGCATATACGTGTACCAG 58.373 43.478 0.00 0.00 0.00 4.00
2369 2530 2.519377 TGGCATATACGTGTACCAGC 57.481 50.000 0.00 1.37 0.00 4.85
2372 2533 2.035449 GGCATATACGTGTACCAGCAGA 59.965 50.000 0.00 0.00 0.00 4.26
2373 2534 3.491964 GGCATATACGTGTACCAGCAGAA 60.492 47.826 0.00 0.00 0.00 3.02
2375 2536 4.025979 GCATATACGTGTACCAGCAGAAAC 60.026 45.833 0.00 0.00 0.00 2.78
2376 2537 3.671008 ATACGTGTACCAGCAGAAACA 57.329 42.857 0.00 0.00 0.00 2.83
2377 2538 2.543777 ACGTGTACCAGCAGAAACAT 57.456 45.000 0.00 0.00 0.00 2.71
2379 2540 3.211045 ACGTGTACCAGCAGAAACATTT 58.789 40.909 0.00 0.00 0.00 2.32
2380 2541 3.630312 ACGTGTACCAGCAGAAACATTTT 59.370 39.130 0.00 0.00 0.00 1.82
2381 2542 4.097286 ACGTGTACCAGCAGAAACATTTTT 59.903 37.500 0.00 0.00 0.00 1.94
2382 2543 4.440758 CGTGTACCAGCAGAAACATTTTTG 59.559 41.667 0.00 0.00 0.00 2.44
2383 2544 5.348164 GTGTACCAGCAGAAACATTTTTGT 58.652 37.500 0.00 0.00 0.00 2.83
2385 2546 5.359576 TGTACCAGCAGAAACATTTTTGTCT 59.640 36.000 0.00 0.00 0.00 3.41
2386 2547 5.343307 ACCAGCAGAAACATTTTTGTCTT 57.657 34.783 0.00 0.00 0.00 3.01
2389 2550 7.327214 ACCAGCAGAAACATTTTTGTCTTAAA 58.673 30.769 0.00 0.00 0.00 1.52
2390 2551 7.821846 ACCAGCAGAAACATTTTTGTCTTAAAA 59.178 29.630 0.00 0.00 0.00 1.52
2419 2584 8.338259 AGATCGTCATTTTTACAGATTATGTGC 58.662 33.333 0.00 0.00 43.80 4.57
2420 2585 7.371126 TCGTCATTTTTACAGATTATGTGCA 57.629 32.000 0.00 0.00 43.80 4.57
2421 2586 7.811653 TCGTCATTTTTACAGATTATGTGCAA 58.188 30.769 0.00 0.00 43.80 4.08
2422 2587 7.962373 TCGTCATTTTTACAGATTATGTGCAAG 59.038 33.333 0.00 0.00 43.80 4.01
2423 2588 7.218773 CGTCATTTTTACAGATTATGTGCAAGG 59.781 37.037 0.00 0.00 43.80 3.61
2425 2590 8.584157 TCATTTTTACAGATTATGTGCAAGGTT 58.416 29.630 0.00 0.00 43.80 3.50
2428 2593 9.685828 TTTTTACAGATTATGTGCAAGGTTAAC 57.314 29.630 0.00 0.00 43.80 2.01
2429 2594 5.545658 ACAGATTATGTGCAAGGTTAACG 57.454 39.130 0.00 0.00 41.91 3.18
2430 2595 4.394920 ACAGATTATGTGCAAGGTTAACGG 59.605 41.667 0.00 0.00 41.91 4.44
2431 2596 4.394920 CAGATTATGTGCAAGGTTAACGGT 59.605 41.667 0.00 0.00 0.00 4.83
2433 2598 6.092944 CAGATTATGTGCAAGGTTAACGGTAA 59.907 38.462 0.00 0.00 0.00 2.85
2435 2600 6.630444 TTATGTGCAAGGTTAACGGTAAAA 57.370 33.333 0.00 0.00 0.00 1.52
2436 2601 4.290104 TGTGCAAGGTTAACGGTAAAAC 57.710 40.909 0.00 0.00 0.00 2.43
2437 2602 3.693085 TGTGCAAGGTTAACGGTAAAACA 59.307 39.130 0.00 0.00 0.00 2.83
2438 2603 4.201930 TGTGCAAGGTTAACGGTAAAACAG 60.202 41.667 0.00 0.00 0.00 3.16
2439 2604 4.035441 GTGCAAGGTTAACGGTAAAACAGA 59.965 41.667 0.00 0.00 0.00 3.41
2440 2605 4.639310 TGCAAGGTTAACGGTAAAACAGAA 59.361 37.500 0.00 0.00 0.00 3.02
2441 2606 5.209977 GCAAGGTTAACGGTAAAACAGAAG 58.790 41.667 0.00 0.00 0.00 2.85
2442 2607 5.209977 CAAGGTTAACGGTAAAACAGAAGC 58.790 41.667 0.00 0.00 0.00 3.86
2444 2609 4.514066 AGGTTAACGGTAAAACAGAAGCTG 59.486 41.667 0.00 0.00 37.52 4.24
2446 2611 5.438117 GTTAACGGTAAAACAGAAGCTGTC 58.562 41.667 0.00 0.00 44.62 3.51
2447 2612 3.188159 ACGGTAAAACAGAAGCTGTCA 57.812 42.857 0.00 0.00 44.62 3.58
2449 2614 3.498397 ACGGTAAAACAGAAGCTGTCATG 59.502 43.478 0.00 0.00 44.62 3.07
2450 2615 3.120199 CGGTAAAACAGAAGCTGTCATGG 60.120 47.826 0.00 0.00 44.62 3.66
2451 2616 3.821033 GGTAAAACAGAAGCTGTCATGGT 59.179 43.478 0.00 0.00 44.62 3.55
2454 2619 2.175878 ACAGAAGCTGTCATGGTCAC 57.824 50.000 0.00 0.00 41.21 3.67
2455 2620 1.417517 ACAGAAGCTGTCATGGTCACA 59.582 47.619 0.00 0.00 41.21 3.58
2457 2622 0.792640 GAAGCTGTCATGGTCACACG 59.207 55.000 0.00 0.00 0.00 4.49
2458 2623 0.392706 AAGCTGTCATGGTCACACGA 59.607 50.000 0.00 0.00 0.00 4.35
2459 2624 0.037882 AGCTGTCATGGTCACACGAG 60.038 55.000 0.00 0.00 0.00 4.18
2460 2625 1.630244 GCTGTCATGGTCACACGAGC 61.630 60.000 0.00 0.00 40.20 5.03
2461 2626 0.037882 CTGTCATGGTCACACGAGCT 60.038 55.000 0.00 0.00 40.44 4.09
2462 2627 0.392706 TGTCATGGTCACACGAGCTT 59.607 50.000 0.00 0.00 40.44 3.74
2463 2628 1.202639 TGTCATGGTCACACGAGCTTT 60.203 47.619 0.00 0.00 40.44 3.51
2464 2629 1.195448 GTCATGGTCACACGAGCTTTG 59.805 52.381 0.00 0.00 40.44 2.77
2465 2630 0.518636 CATGGTCACACGAGCTTTGG 59.481 55.000 0.00 0.00 40.44 3.28
2466 2631 0.108585 ATGGTCACACGAGCTTTGGT 59.891 50.000 0.00 0.00 40.44 3.67
2467 2632 0.813610 TGGTCACACGAGCTTTGGTG 60.814 55.000 10.76 10.76 40.44 4.17
2468 2633 0.531974 GGTCACACGAGCTTTGGTGA 60.532 55.000 17.12 13.69 37.89 4.02
2469 2634 1.512926 GTCACACGAGCTTTGGTGAT 58.487 50.000 17.12 2.95 41.73 3.06
2470 2635 1.873591 GTCACACGAGCTTTGGTGATT 59.126 47.619 17.12 0.00 41.73 2.57
2471 2636 2.290641 GTCACACGAGCTTTGGTGATTT 59.709 45.455 17.12 0.00 41.73 2.17
2472 2637 2.290367 TCACACGAGCTTTGGTGATTTG 59.710 45.455 17.12 7.88 35.51 2.32
2473 2638 1.608590 ACACGAGCTTTGGTGATTTGG 59.391 47.619 17.12 0.00 37.58 3.28
2474 2639 1.068333 CACGAGCTTTGGTGATTTGGG 60.068 52.381 7.50 0.00 36.25 4.12
2475 2640 0.109132 CGAGCTTTGGTGATTTGGGC 60.109 55.000 0.00 0.00 0.00 5.36
2476 2641 0.968405 GAGCTTTGGTGATTTGGGCA 59.032 50.000 0.00 0.00 0.00 5.36
2477 2642 1.551883 GAGCTTTGGTGATTTGGGCAT 59.448 47.619 0.00 0.00 0.00 4.40
2478 2643 1.980036 AGCTTTGGTGATTTGGGCATT 59.020 42.857 0.00 0.00 0.00 3.56
2479 2644 2.372837 AGCTTTGGTGATTTGGGCATTT 59.627 40.909 0.00 0.00 0.00 2.32
2480 2645 3.582208 AGCTTTGGTGATTTGGGCATTTA 59.418 39.130 0.00 0.00 0.00 1.40
2481 2646 4.041444 AGCTTTGGTGATTTGGGCATTTAA 59.959 37.500 0.00 0.00 0.00 1.52
2482 2647 4.154015 GCTTTGGTGATTTGGGCATTTAAC 59.846 41.667 0.00 0.00 0.00 2.01
2483 2648 4.963318 TTGGTGATTTGGGCATTTAACA 57.037 36.364 0.00 0.00 0.00 2.41
2484 2649 5.495926 TTGGTGATTTGGGCATTTAACAT 57.504 34.783 0.00 0.00 0.00 2.71
2485 2650 5.495926 TGGTGATTTGGGCATTTAACATT 57.504 34.783 0.00 0.00 0.00 2.71
2486 2651 6.611613 TGGTGATTTGGGCATTTAACATTA 57.388 33.333 0.00 0.00 0.00 1.90
2487 2652 7.009179 TGGTGATTTGGGCATTTAACATTAA 57.991 32.000 0.00 0.00 0.00 1.40
2488 2653 7.453393 TGGTGATTTGGGCATTTAACATTAAA 58.547 30.769 0.00 0.00 37.08 1.52
2489 2654 7.939039 TGGTGATTTGGGCATTTAACATTAAAA 59.061 29.630 1.14 0.00 36.35 1.52
2490 2655 8.787852 GGTGATTTGGGCATTTAACATTAAAAA 58.212 29.630 1.14 0.00 36.35 1.94
2519 2684 9.940166 AAAGACTGTATACGTTGTTTTTAAAGG 57.060 29.630 0.00 0.00 0.00 3.11
2520 2685 8.667076 AGACTGTATACGTTGTTTTTAAAGGT 57.333 30.769 0.00 0.00 0.00 3.50
2521 2686 9.112725 AGACTGTATACGTTGTTTTTAAAGGTT 57.887 29.630 0.00 0.00 0.00 3.50
2522 2687 9.373750 GACTGTATACGTTGTTTTTAAAGGTTC 57.626 33.333 0.00 0.00 0.00 3.62
2523 2688 8.344831 ACTGTATACGTTGTTTTTAAAGGTTCC 58.655 33.333 0.00 0.00 0.00 3.62
2524 2689 7.647228 TGTATACGTTGTTTTTAAAGGTTCCC 58.353 34.615 0.00 0.00 0.00 3.97
2525 2690 6.712179 ATACGTTGTTTTTAAAGGTTCCCA 57.288 33.333 0.00 0.00 0.00 4.37
2526 2691 5.601583 ACGTTGTTTTTAAAGGTTCCCAT 57.398 34.783 0.00 0.00 0.00 4.00
2527 2692 5.353111 ACGTTGTTTTTAAAGGTTCCCATG 58.647 37.500 0.00 0.00 0.00 3.66
2528 2693 4.747605 CGTTGTTTTTAAAGGTTCCCATGG 59.252 41.667 4.14 4.14 0.00 3.66
2529 2694 5.452077 CGTTGTTTTTAAAGGTTCCCATGGA 60.452 40.000 15.22 0.00 0.00 3.41
2530 2695 5.799827 TGTTTTTAAAGGTTCCCATGGAG 57.200 39.130 15.22 3.25 31.21 3.86
2531 2696 5.459505 TGTTTTTAAAGGTTCCCATGGAGA 58.540 37.500 15.22 6.02 31.21 3.71
2532 2697 5.900123 TGTTTTTAAAGGTTCCCATGGAGAA 59.100 36.000 15.22 12.35 31.21 2.87
2533 2698 6.384305 TGTTTTTAAAGGTTCCCATGGAGAAA 59.616 34.615 15.22 1.30 31.21 2.52
2534 2699 7.071824 TGTTTTTAAAGGTTCCCATGGAGAAAT 59.928 33.333 15.22 4.90 31.21 2.17
2535 2700 6.603940 TTTAAAGGTTCCCATGGAGAAATG 57.396 37.500 15.22 0.00 31.21 2.32
2536 2701 4.402616 AAAGGTTCCCATGGAGAAATGA 57.597 40.909 15.22 0.00 31.21 2.57
2537 2702 4.402616 AAGGTTCCCATGGAGAAATGAA 57.597 40.909 15.22 3.83 31.21 2.57
2538 2703 3.701664 AGGTTCCCATGGAGAAATGAAC 58.298 45.455 15.22 16.11 31.21 3.18
2539 2704 3.075882 AGGTTCCCATGGAGAAATGAACA 59.924 43.478 22.70 0.02 31.21 3.18
2540 2705 3.193479 GGTTCCCATGGAGAAATGAACAC 59.807 47.826 22.70 13.08 31.21 3.32
2541 2706 3.085952 TCCCATGGAGAAATGAACACC 57.914 47.619 15.22 0.00 0.00 4.16
2542 2707 2.378208 TCCCATGGAGAAATGAACACCA 59.622 45.455 15.22 0.00 33.17 4.17
2543 2708 3.164268 CCCATGGAGAAATGAACACCAA 58.836 45.455 15.22 0.00 32.49 3.67
2544 2709 3.194116 CCCATGGAGAAATGAACACCAAG 59.806 47.826 15.22 0.00 32.49 3.61
2545 2710 4.081406 CCATGGAGAAATGAACACCAAGA 58.919 43.478 5.56 0.00 32.49 3.02
2546 2711 4.523943 CCATGGAGAAATGAACACCAAGAA 59.476 41.667 5.56 0.00 32.49 2.52
2547 2712 5.186409 CCATGGAGAAATGAACACCAAGAAT 59.814 40.000 5.56 0.00 32.49 2.40
2548 2713 6.295462 CCATGGAGAAATGAACACCAAGAATT 60.295 38.462 5.56 0.00 32.49 2.17
2549 2714 6.331369 TGGAGAAATGAACACCAAGAATTC 57.669 37.500 0.00 0.00 0.00 2.17
2550 2715 5.832595 TGGAGAAATGAACACCAAGAATTCA 59.167 36.000 8.44 0.00 36.81 2.57
2551 2716 6.494491 TGGAGAAATGAACACCAAGAATTCAT 59.506 34.615 8.44 0.00 43.29 2.57
2552 2717 7.669304 TGGAGAAATGAACACCAAGAATTCATA 59.331 33.333 8.44 0.00 41.17 2.15
2553 2718 8.186821 GGAGAAATGAACACCAAGAATTCATAG 58.813 37.037 8.44 0.00 41.17 2.23
2554 2719 7.542025 AGAAATGAACACCAAGAATTCATAGC 58.458 34.615 8.44 0.00 41.17 2.97
2555 2720 7.395489 AGAAATGAACACCAAGAATTCATAGCT 59.605 33.333 8.44 0.00 41.17 3.32
2556 2721 6.690194 ATGAACACCAAGAATTCATAGCTC 57.310 37.500 8.44 0.00 40.44 4.09
2557 2722 5.559770 TGAACACCAAGAATTCATAGCTCA 58.440 37.500 8.44 0.00 0.00 4.26
2558 2723 5.645067 TGAACACCAAGAATTCATAGCTCAG 59.355 40.000 8.44 0.00 0.00 3.35
2559 2724 5.171339 ACACCAAGAATTCATAGCTCAGT 57.829 39.130 8.44 0.00 0.00 3.41
2560 2725 5.564550 ACACCAAGAATTCATAGCTCAGTT 58.435 37.500 8.44 0.00 0.00 3.16
2561 2726 5.413833 ACACCAAGAATTCATAGCTCAGTTG 59.586 40.000 8.44 0.06 0.00 3.16
2562 2727 4.946157 ACCAAGAATTCATAGCTCAGTTGG 59.054 41.667 8.44 11.29 38.31 3.77
2563 2728 4.946157 CCAAGAATTCATAGCTCAGTTGGT 59.054 41.667 8.44 0.00 0.00 3.67
2564 2729 5.416952 CCAAGAATTCATAGCTCAGTTGGTT 59.583 40.000 8.44 0.00 0.00 3.67
2565 2730 6.599244 CCAAGAATTCATAGCTCAGTTGGTTA 59.401 38.462 8.44 0.00 0.00 2.85
2566 2731 7.201679 CCAAGAATTCATAGCTCAGTTGGTTAG 60.202 40.741 8.44 0.00 0.00 2.34
2567 2732 7.187824 AGAATTCATAGCTCAGTTGGTTAGA 57.812 36.000 8.44 0.00 0.00 2.10
2568 2733 7.271511 AGAATTCATAGCTCAGTTGGTTAGAG 58.728 38.462 8.44 0.00 0.00 2.43
2573 2738 2.100605 CTCAGTTGGTTAGAGCACCC 57.899 55.000 0.00 0.00 35.73 4.61
2574 2739 0.320374 TCAGTTGGTTAGAGCACCCG 59.680 55.000 0.00 0.00 35.73 5.28
2575 2740 0.320374 CAGTTGGTTAGAGCACCCGA 59.680 55.000 0.00 0.00 35.73 5.14
2576 2741 0.608640 AGTTGGTTAGAGCACCCGAG 59.391 55.000 0.00 0.00 35.73 4.63
2577 2742 0.320697 GTTGGTTAGAGCACCCGAGT 59.679 55.000 0.00 0.00 35.73 4.18
2578 2743 1.053424 TTGGTTAGAGCACCCGAGTT 58.947 50.000 0.00 0.00 35.73 3.01
2579 2744 0.606604 TGGTTAGAGCACCCGAGTTC 59.393 55.000 0.00 0.00 35.73 3.01
2580 2745 0.606604 GGTTAGAGCACCCGAGTTCA 59.393 55.000 0.00 0.00 0.00 3.18
2581 2746 1.001633 GGTTAGAGCACCCGAGTTCAA 59.998 52.381 0.00 0.00 0.00 2.69
2582 2747 2.067013 GTTAGAGCACCCGAGTTCAAC 58.933 52.381 0.00 0.00 0.00 3.18
2583 2748 1.629043 TAGAGCACCCGAGTTCAACT 58.371 50.000 0.00 0.00 0.00 3.16
2584 2749 0.318762 AGAGCACCCGAGTTCAACTC 59.681 55.000 7.56 7.56 41.71 3.01
2585 2750 0.318762 GAGCACCCGAGTTCAACTCT 59.681 55.000 15.66 0.00 42.92 3.24
2586 2751 0.318762 AGCACCCGAGTTCAACTCTC 59.681 55.000 15.66 0.18 42.92 3.20
2587 2752 0.033504 GCACCCGAGTTCAACTCTCA 59.966 55.000 15.66 0.00 42.92 3.27
2588 2753 1.784525 CACCCGAGTTCAACTCTCAC 58.215 55.000 15.66 0.00 42.92 3.51
2589 2754 1.068588 CACCCGAGTTCAACTCTCACA 59.931 52.381 15.66 0.00 42.92 3.58
2590 2755 1.068741 ACCCGAGTTCAACTCTCACAC 59.931 52.381 15.66 0.00 42.92 3.82
2591 2756 1.409412 CCGAGTTCAACTCTCACACG 58.591 55.000 15.66 1.62 42.92 4.49
2592 2757 1.409412 CGAGTTCAACTCTCACACGG 58.591 55.000 15.66 0.00 42.92 4.94
2593 2758 1.001706 CGAGTTCAACTCTCACACGGA 60.002 52.381 15.66 0.00 42.92 4.69
2594 2759 2.667137 GAGTTCAACTCTCACACGGAG 58.333 52.381 10.55 0.00 41.88 4.63
2595 2760 1.140816 GTTCAACTCTCACACGGAGC 58.859 55.000 0.00 0.00 43.70 4.70
2596 2761 0.750249 TTCAACTCTCACACGGAGCA 59.250 50.000 0.00 0.00 43.70 4.26
2597 2762 0.750249 TCAACTCTCACACGGAGCAA 59.250 50.000 0.00 0.00 43.70 3.91
2598 2763 1.344438 TCAACTCTCACACGGAGCAAT 59.656 47.619 0.00 0.00 43.70 3.56
2599 2764 1.462283 CAACTCTCACACGGAGCAATG 59.538 52.381 0.00 0.00 43.70 2.82
2600 2765 0.671781 ACTCTCACACGGAGCAATGC 60.672 55.000 0.00 0.00 43.70 3.56
2601 2766 0.390866 CTCTCACACGGAGCAATGCT 60.391 55.000 7.79 7.79 43.70 3.79
2602 2767 0.894835 TCTCACACGGAGCAATGCTA 59.105 50.000 8.12 0.00 43.70 3.49
2603 2768 1.482182 TCTCACACGGAGCAATGCTAT 59.518 47.619 8.12 0.00 43.70 2.97
2604 2769 2.093500 TCTCACACGGAGCAATGCTATT 60.093 45.455 8.12 0.00 43.70 1.73
2605 2770 2.279741 TCACACGGAGCAATGCTATTC 58.720 47.619 8.12 0.00 39.88 1.75
2606 2771 2.093500 TCACACGGAGCAATGCTATTCT 60.093 45.455 8.12 0.00 39.88 2.40
2607 2772 2.679837 CACACGGAGCAATGCTATTCTT 59.320 45.455 8.12 0.00 39.88 2.52
2608 2773 3.871006 CACACGGAGCAATGCTATTCTTA 59.129 43.478 8.12 0.00 39.88 2.10
2609 2774 3.871594 ACACGGAGCAATGCTATTCTTAC 59.128 43.478 8.12 0.00 39.88 2.34
2610 2775 3.060272 CACGGAGCAATGCTATTCTTACG 60.060 47.826 8.12 0.00 39.88 3.18
2629 2795 8.249327 TCTTACGTACAAAAAGTTTACACACA 57.751 30.769 0.00 0.00 0.00 3.72
2665 2831 5.412594 TGGCAGTTAGCTAAAATCAGTGAAG 59.587 40.000 7.99 0.00 44.79 3.02
2666 2832 5.327891 GCAGTTAGCTAAAATCAGTGAAGC 58.672 41.667 7.99 6.45 41.15 3.86
2667 2833 5.554636 CAGTTAGCTAAAATCAGTGAAGCG 58.445 41.667 7.99 0.00 38.23 4.68
2668 2834 4.631813 AGTTAGCTAAAATCAGTGAAGCGG 59.368 41.667 7.99 0.00 38.23 5.52
2669 2835 3.059352 AGCTAAAATCAGTGAAGCGGT 57.941 42.857 8.52 0.00 38.23 5.68
2670 2836 3.412386 AGCTAAAATCAGTGAAGCGGTT 58.588 40.909 0.00 0.00 38.23 4.44
2686 2852 2.874457 GCGGTTCCCATCTGTAACTTGT 60.874 50.000 0.00 0.00 0.00 3.16
2690 2856 5.310451 GGTTCCCATCTGTAACTTGTACAA 58.690 41.667 8.28 8.28 0.00 2.41
2691 2857 5.766174 GGTTCCCATCTGTAACTTGTACAAA 59.234 40.000 10.03 0.00 0.00 2.83
2692 2858 6.263617 GGTTCCCATCTGTAACTTGTACAAAA 59.736 38.462 10.03 0.00 0.00 2.44
2693 2859 7.039993 GGTTCCCATCTGTAACTTGTACAAAAT 60.040 37.037 10.03 4.01 0.00 1.82
2694 2860 7.447374 TCCCATCTGTAACTTGTACAAAATG 57.553 36.000 10.03 0.63 0.00 2.32
2695 2861 6.072175 TCCCATCTGTAACTTGTACAAAATGC 60.072 38.462 10.03 5.69 0.00 3.56
2696 2862 6.071952 CCCATCTGTAACTTGTACAAAATGCT 60.072 38.462 10.03 0.00 0.00 3.79
2697 2863 7.120579 CCCATCTGTAACTTGTACAAAATGCTA 59.879 37.037 10.03 0.00 0.00 3.49
2698 2864 8.677300 CCATCTGTAACTTGTACAAAATGCTAT 58.323 33.333 10.03 1.66 0.00 2.97
2701 2867 9.502091 TCTGTAACTTGTACAAAATGCTATTCT 57.498 29.630 10.03 0.00 0.00 2.40
2703 2869 9.891828 TGTAACTTGTACAAAATGCTATTCTTG 57.108 29.630 10.03 0.00 0.00 3.02
2727 2893 1.202927 TCACAAGAGGAGCTTTTGGGG 60.203 52.381 0.00 0.00 35.48 4.96
2804 2972 5.880054 AGTAACCATGGAAAATTCGTCAG 57.120 39.130 21.47 0.00 0.00 3.51
2806 2974 2.795329 ACCATGGAAAATTCGTCAGCT 58.205 42.857 21.47 0.00 0.00 4.24
2807 2975 2.489329 ACCATGGAAAATTCGTCAGCTG 59.511 45.455 21.47 7.63 0.00 4.24
2885 3053 8.169977 AGTTCAACTCTCAATGAAAGCAATTA 57.830 30.769 0.00 0.00 37.31 1.40
2888 3056 9.985730 TTCAACTCTCAATGAAAGCAATTATTT 57.014 25.926 0.00 0.00 32.89 1.40
2889 3057 9.985730 TCAACTCTCAATGAAAGCAATTATTTT 57.014 25.926 0.00 0.00 0.00 1.82
2892 3060 9.768662 ACTCTCAATGAAAGCAATTATTTTTGT 57.231 25.926 0.00 0.00 0.00 2.83
2917 3085 5.537300 TTCTACAGAGCTTTGTTCAGACT 57.463 39.130 15.89 0.00 32.56 3.24
2940 3111 6.425114 ACTGATATAGCATTAAAACCTGCTCG 59.575 38.462 4.60 0.00 45.30 5.03
2945 3116 4.546570 AGCATTAAAACCTGCTCGTTTTC 58.453 39.130 14.94 4.75 45.30 2.29
2947 3118 4.617223 GCATTAAAACCTGCTCGTTTTCTC 59.383 41.667 14.94 3.74 43.21 2.87
2951 3122 4.983671 AAACCTGCTCGTTTTCTCTTTT 57.016 36.364 0.00 0.00 31.94 2.27
2952 3123 4.983671 AACCTGCTCGTTTTCTCTTTTT 57.016 36.364 0.00 0.00 0.00 1.94
2954 3125 3.945285 ACCTGCTCGTTTTCTCTTTTTGA 59.055 39.130 0.00 0.00 0.00 2.69
2959 3130 6.329496 TGCTCGTTTTCTCTTTTTGATTGTT 58.671 32.000 0.00 0.00 0.00 2.83
2971 3142 1.974265 TGATTGTTCGGAAGGCACAA 58.026 45.000 0.00 0.00 38.47 3.33
2985 3156 0.670239 GCACAAGCCCCAAAAATCGG 60.670 55.000 0.00 0.00 33.58 4.18
2986 3157 0.678950 CACAAGCCCCAAAAATCGGT 59.321 50.000 0.00 0.00 0.00 4.69
2988 3159 0.037419 CAAGCCCCAAAAATCGGTGG 60.037 55.000 0.00 0.00 34.44 4.61
2989 3160 0.178947 AAGCCCCAAAAATCGGTGGA 60.179 50.000 0.00 0.00 37.03 4.02
2990 3161 0.041090 AGCCCCAAAAATCGGTGGAT 59.959 50.000 0.00 0.00 37.03 3.41
2991 3162 0.459899 GCCCCAAAAATCGGTGGATC 59.540 55.000 0.00 0.00 37.03 3.36
2992 3163 1.846007 CCCCAAAAATCGGTGGATCA 58.154 50.000 0.00 0.00 37.03 2.92
2993 3164 1.750778 CCCCAAAAATCGGTGGATCAG 59.249 52.381 0.00 0.00 37.03 2.90
2994 3165 2.446435 CCCAAAAATCGGTGGATCAGT 58.554 47.619 0.00 0.00 37.03 3.41
2995 3166 2.423538 CCCAAAAATCGGTGGATCAGTC 59.576 50.000 0.00 0.00 37.03 3.51
2996 3167 3.347216 CCAAAAATCGGTGGATCAGTCT 58.653 45.455 0.00 0.00 37.03 3.24
2997 3168 3.127548 CCAAAAATCGGTGGATCAGTCTG 59.872 47.826 0.00 0.00 37.03 3.51
2998 3169 2.029838 AAATCGGTGGATCAGTCTGC 57.970 50.000 0.00 0.00 30.81 4.26
2999 3170 0.904649 AATCGGTGGATCAGTCTGCA 59.095 50.000 0.00 0.00 30.81 4.41
3000 3171 1.126488 ATCGGTGGATCAGTCTGCAT 58.874 50.000 0.00 0.00 0.00 3.96
3001 3172 0.176449 TCGGTGGATCAGTCTGCATG 59.824 55.000 0.00 0.00 0.00 4.06
3002 3173 1.434622 CGGTGGATCAGTCTGCATGC 61.435 60.000 11.82 11.82 0.00 4.06
3003 3174 0.393402 GGTGGATCAGTCTGCATGCA 60.393 55.000 21.29 21.29 0.00 3.96
3004 3175 1.015109 GTGGATCAGTCTGCATGCAG 58.985 55.000 36.80 36.80 44.86 4.41
3005 3176 0.746923 TGGATCAGTCTGCATGCAGC 60.747 55.000 37.48 30.73 43.31 5.25
3006 3177 0.464013 GGATCAGTCTGCATGCAGCT 60.464 55.000 37.48 32.16 45.94 4.24
3007 3178 1.202615 GGATCAGTCTGCATGCAGCTA 60.203 52.381 37.48 22.34 45.94 3.32
3008 3179 2.558378 GATCAGTCTGCATGCAGCTAA 58.442 47.619 37.48 25.36 45.94 3.09
3009 3180 2.477845 TCAGTCTGCATGCAGCTAAA 57.522 45.000 37.48 24.58 45.94 1.85
3010 3181 2.995283 TCAGTCTGCATGCAGCTAAAT 58.005 42.857 37.48 20.66 45.94 1.40
3011 3182 3.349927 TCAGTCTGCATGCAGCTAAATT 58.650 40.909 37.48 18.00 45.94 1.82
3012 3183 3.376234 TCAGTCTGCATGCAGCTAAATTC 59.624 43.478 37.48 21.10 45.94 2.17
3013 3184 3.377485 CAGTCTGCATGCAGCTAAATTCT 59.623 43.478 37.48 22.59 45.94 2.40
3014 3185 3.377485 AGTCTGCATGCAGCTAAATTCTG 59.623 43.478 37.48 15.46 45.94 3.02
3015 3186 3.376234 GTCTGCATGCAGCTAAATTCTGA 59.624 43.478 37.48 17.49 45.94 3.27
3016 3187 4.011698 TCTGCATGCAGCTAAATTCTGAA 58.988 39.130 37.48 16.79 45.94 3.02
3017 3188 4.643334 TCTGCATGCAGCTAAATTCTGAAT 59.357 37.500 37.48 0.00 45.94 2.57
3018 3189 5.126545 TCTGCATGCAGCTAAATTCTGAATT 59.873 36.000 37.48 9.76 45.94 2.17
3019 3190 5.106442 TGCATGCAGCTAAATTCTGAATTG 58.894 37.500 18.46 6.29 45.94 2.32
3020 3191 4.506654 GCATGCAGCTAAATTCTGAATTGG 59.493 41.667 14.21 12.52 41.15 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.258445 AAATCCTCTCTCGCGGTGGT 61.258 55.000 6.13 0.00 0.00 4.16
1 2 0.528684 GAAATCCTCTCTCGCGGTGG 60.529 60.000 6.13 0.29 0.00 4.61
2 3 0.173481 TGAAATCCTCTCTCGCGGTG 59.827 55.000 6.13 0.00 0.00 4.94
3 4 0.895530 TTGAAATCCTCTCTCGCGGT 59.104 50.000 6.13 0.00 0.00 5.68
4 5 2.010145 TTTGAAATCCTCTCTCGCGG 57.990 50.000 6.13 0.00 0.00 6.46
5 6 3.452474 AGATTTGAAATCCTCTCTCGCG 58.548 45.455 13.88 0.00 0.00 5.87
47 52 1.514228 CTCGGTGGTGACGATGACG 60.514 63.158 0.00 0.00 45.75 4.35
48 53 0.806868 TACTCGGTGGTGACGATGAC 59.193 55.000 0.00 0.00 39.89 3.06
49 54 0.806868 GTACTCGGTGGTGACGATGA 59.193 55.000 0.00 0.00 39.89 2.92
50 55 0.809385 AGTACTCGGTGGTGACGATG 59.191 55.000 0.00 0.00 39.89 3.84
52 57 1.806542 GTTAGTACTCGGTGGTGACGA 59.193 52.381 0.00 0.00 38.79 4.20
55 60 1.536766 CGTGTTAGTACTCGGTGGTGA 59.463 52.381 0.00 0.00 37.55 4.02
56 61 1.536766 TCGTGTTAGTACTCGGTGGTG 59.463 52.381 0.00 0.00 40.59 4.17
58 63 2.860062 CTTCGTGTTAGTACTCGGTGG 58.140 52.381 0.00 0.00 40.59 4.61
59 64 2.248487 GCTTCGTGTTAGTACTCGGTG 58.752 52.381 0.00 0.00 40.59 4.94
60 65 1.881973 TGCTTCGTGTTAGTACTCGGT 59.118 47.619 0.00 0.00 40.59 4.69
61 66 2.248487 GTGCTTCGTGTTAGTACTCGG 58.752 52.381 0.00 0.00 40.59 4.63
62 67 2.248487 GGTGCTTCGTGTTAGTACTCG 58.752 52.381 0.00 0.00 41.32 4.18
178 184 2.587194 CGAGCTCCGGATGCAAGG 60.587 66.667 22.44 5.35 33.91 3.61
185 191 2.852495 GATTGTTGGCGAGCTCCGGA 62.852 60.000 8.47 2.93 39.04 5.14
195 201 0.725117 CGGAACTACGGATTGTTGGC 59.275 55.000 0.00 0.00 0.00 4.52
208 215 1.658673 GTGGTGACTCGTCGGAACT 59.341 57.895 0.00 0.00 0.00 3.01
211 218 1.605451 ATGGTGGTGACTCGTCGGA 60.605 57.895 0.00 0.00 0.00 4.55
215 222 2.592993 CCCCATGGTGGTGACTCGT 61.593 63.158 11.73 0.00 35.17 4.18
217 224 2.044946 GCCCCATGGTGGTGACTC 60.045 66.667 11.73 0.00 35.17 3.36
221 228 2.044650 CAGAGCCCCATGGTGGTG 60.045 66.667 11.73 2.82 35.17 4.17
223 230 0.967380 GAAACAGAGCCCCATGGTGG 60.967 60.000 11.73 12.73 37.25 4.61
224 231 0.251297 TGAAACAGAGCCCCATGGTG 60.251 55.000 11.73 0.00 0.00 4.17
225 232 0.038744 CTGAAACAGAGCCCCATGGT 59.961 55.000 11.73 0.00 32.44 3.55
300 338 1.980772 CCTTGGCAGGCTTCTTGGG 60.981 63.158 0.00 0.00 31.53 4.12
301 339 1.228675 ACCTTGGCAGGCTTCTTGG 60.229 57.895 0.00 0.00 45.56 3.61
302 340 1.580845 CGACCTTGGCAGGCTTCTTG 61.581 60.000 0.00 0.00 45.56 3.02
303 341 1.302832 CGACCTTGGCAGGCTTCTT 60.303 57.895 0.00 0.00 45.56 2.52
304 342 2.348998 CGACCTTGGCAGGCTTCT 59.651 61.111 0.00 0.00 45.56 2.85
305 343 3.435186 GCGACCTTGGCAGGCTTC 61.435 66.667 0.00 0.00 45.56 3.86
889 1031 3.211963 ATTCTCATTGGCCGCGGC 61.212 61.111 41.63 41.63 41.06 6.53
963 1105 2.665603 GACTGCTCGGCCTTCCTT 59.334 61.111 0.00 0.00 0.00 3.36
1099 1242 6.937436 AAGTCGTGGAGTTACAAAAGAAAT 57.063 33.333 0.00 0.00 0.00 2.17
1102 1245 6.339730 TGTTAAGTCGTGGAGTTACAAAAGA 58.660 36.000 0.00 0.00 28.64 2.52
1119 1262 1.933853 GCGGCTGATCGAATGTTAAGT 59.066 47.619 0.00 0.00 0.00 2.24
1128 1271 0.528466 GATTGTGAGCGGCTGATCGA 60.528 55.000 7.50 0.00 31.60 3.59
1171 1316 0.535335 GGGTGGCGACAGTAATCTCA 59.465 55.000 0.00 0.00 44.46 3.27
1237 1382 1.380650 GGTCTCCTCCGCCTTCTCT 60.381 63.158 0.00 0.00 0.00 3.10
1258 1403 0.601558 TAGTCTCTGACACCGCAACC 59.398 55.000 0.46 0.00 34.60 3.77
1266 1411 0.034960 AGGCGCTCTAGTCTCTGACA 60.035 55.000 7.64 0.00 34.60 3.58
1270 1415 0.393267 ACGAAGGCGCTCTAGTCTCT 60.393 55.000 7.64 0.00 42.48 3.10
1276 1421 0.963856 TCTTGGACGAAGGCGCTCTA 60.964 55.000 7.64 0.00 42.48 2.43
1282 1427 1.671379 GGTGGTCTTGGACGAAGGC 60.671 63.158 0.00 0.00 35.32 4.35
1285 1430 0.824595 TCTCGGTGGTCTTGGACGAA 60.825 55.000 0.00 0.00 32.65 3.85
1621 1766 4.717629 CTCGGCGCGTCAAGGTCA 62.718 66.667 12.89 0.00 0.00 4.02
1920 2065 2.125512 GAGCATTGACGCCGGAGT 60.126 61.111 11.88 11.88 0.00 3.85
2015 2160 2.308690 GCCTAATCTCCCTCACTACGT 58.691 52.381 0.00 0.00 0.00 3.57
2031 2176 2.420547 GCCATCTCACACATCTTGCCTA 60.421 50.000 0.00 0.00 0.00 3.93
2080 2228 1.272781 GAGATCTGACCGTGAAAGCG 58.727 55.000 0.00 0.00 0.00 4.68
2099 2247 4.084849 TCGCAACACAAAAACAAACACTTG 60.085 37.500 0.00 0.00 38.61 3.16
2100 2248 4.051922 TCGCAACACAAAAACAAACACTT 58.948 34.783 0.00 0.00 0.00 3.16
2120 2268 5.288015 AGACTACATCTGAAGAATGCATCG 58.712 41.667 0.00 0.00 35.81 3.84
2122 2270 5.296283 GCAAGACTACATCTGAAGAATGCAT 59.704 40.000 0.00 0.00 37.88 3.96
2125 2273 7.253917 CGTTAGCAAGACTACATCTGAAGAATG 60.254 40.741 0.00 0.00 37.88 2.67
2126 2274 6.754209 CGTTAGCAAGACTACATCTGAAGAAT 59.246 38.462 0.00 0.00 37.88 2.40
2128 2276 5.183331 ACGTTAGCAAGACTACATCTGAAGA 59.817 40.000 0.00 0.00 37.88 2.87
2129 2277 5.403246 ACGTTAGCAAGACTACATCTGAAG 58.597 41.667 0.00 0.00 37.88 3.02
2160 2316 6.730507 TCCCAGATAATGATAGCATGGTCTAA 59.269 38.462 0.00 0.00 34.26 2.10
2162 2318 5.096521 TCCCAGATAATGATAGCATGGTCT 58.903 41.667 0.00 0.00 34.26 3.85
2167 2323 5.509832 TTGCTCCCAGATAATGATAGCAT 57.490 39.130 0.00 0.00 42.41 3.79
2168 2324 4.980339 TTGCTCCCAGATAATGATAGCA 57.020 40.909 0.00 0.00 41.70 3.49
2169 2325 4.457257 GGTTTGCTCCCAGATAATGATAGC 59.543 45.833 0.00 0.00 37.13 2.97
2170 2326 5.704515 CAGGTTTGCTCCCAGATAATGATAG 59.295 44.000 0.00 0.00 0.00 2.08
2171 2327 5.132648 ACAGGTTTGCTCCCAGATAATGATA 59.867 40.000 0.00 0.00 0.00 2.15
2172 2328 4.079558 ACAGGTTTGCTCCCAGATAATGAT 60.080 41.667 0.00 0.00 0.00 2.45
2180 2341 1.561542 AGGATACAGGTTTGCTCCCAG 59.438 52.381 0.00 0.00 41.41 4.45
2192 2353 3.900601 ACAGGCCTGAATAGAGGATACAG 59.099 47.826 39.19 6.91 34.69 2.74
2223 2384 0.907486 CCAGAGCCCAGAACTGATCA 59.093 55.000 3.19 0.00 34.07 2.92
2228 2389 2.503356 CAGTAATCCAGAGCCCAGAACT 59.497 50.000 0.00 0.00 0.00 3.01
2233 2394 0.833287 GCTCAGTAATCCAGAGCCCA 59.167 55.000 0.00 0.00 46.82 5.36
2237 2398 4.529769 TCCATATGGCTCAGTAATCCAGAG 59.470 45.833 17.58 0.00 32.78 3.35
2238 2399 4.492646 TCCATATGGCTCAGTAATCCAGA 58.507 43.478 17.58 0.00 32.78 3.86
2239 2400 4.897509 TCCATATGGCTCAGTAATCCAG 57.102 45.455 17.58 0.00 32.78 3.86
2240 2401 4.845796 TGATCCATATGGCTCAGTAATCCA 59.154 41.667 21.68 0.33 35.61 3.41
2241 2402 5.426689 TGATCCATATGGCTCAGTAATCC 57.573 43.478 21.68 0.00 35.61 3.01
2248 2409 4.486839 TCTTCTCTGATCCATATGGCTCA 58.513 43.478 23.45 23.45 37.94 4.26
2249 2410 4.621274 GCTCTTCTCTGATCCATATGGCTC 60.621 50.000 17.58 17.33 34.44 4.70
2250 2411 3.261390 GCTCTTCTCTGATCCATATGGCT 59.739 47.826 17.58 7.46 34.44 4.75
2251 2412 3.261390 AGCTCTTCTCTGATCCATATGGC 59.739 47.826 17.58 4.61 34.44 4.40
2252 2413 5.486735 AAGCTCTTCTCTGATCCATATGG 57.513 43.478 16.25 16.25 0.00 2.74
2253 2414 7.218614 AGAAAAGCTCTTCTCTGATCCATATG 58.781 38.462 0.00 0.00 29.31 1.78
2254 2415 7.377696 AGAAAAGCTCTTCTCTGATCCATAT 57.622 36.000 0.00 0.00 29.31 1.78
2255 2416 6.460814 CGAGAAAAGCTCTTCTCTGATCCATA 60.461 42.308 23.83 0.00 46.16 2.74
2256 2417 5.673514 GAGAAAAGCTCTTCTCTGATCCAT 58.326 41.667 20.41 0.00 45.30 3.41
2257 2418 4.381398 CGAGAAAAGCTCTTCTCTGATCCA 60.381 45.833 23.83 0.00 46.16 3.41
2258 2419 4.111916 CGAGAAAAGCTCTTCTCTGATCC 58.888 47.826 23.83 1.62 46.16 3.36
2259 2420 4.992688 TCGAGAAAAGCTCTTCTCTGATC 58.007 43.478 23.83 2.55 46.16 2.92
2260 2421 4.462483 ACTCGAGAAAAGCTCTTCTCTGAT 59.538 41.667 23.83 8.93 46.16 2.90
2261 2422 3.823873 ACTCGAGAAAAGCTCTTCTCTGA 59.176 43.478 23.83 20.24 46.16 3.27
2262 2423 4.173036 ACTCGAGAAAAGCTCTTCTCTG 57.827 45.455 23.83 18.60 46.16 3.35
2263 2424 4.864704 AACTCGAGAAAAGCTCTTCTCT 57.135 40.909 23.83 6.26 46.16 3.10
2264 2425 5.118510 CAGAAACTCGAGAAAAGCTCTTCTC 59.881 44.000 21.68 18.23 45.30 2.87
2265 2426 4.987912 CAGAAACTCGAGAAAAGCTCTTCT 59.012 41.667 21.68 0.77 41.66 2.85
2266 2427 4.985409 TCAGAAACTCGAGAAAAGCTCTTC 59.015 41.667 21.68 8.01 41.66 2.87
2267 2428 4.950050 TCAGAAACTCGAGAAAAGCTCTT 58.050 39.130 21.68 0.00 41.66 2.85
2268 2429 4.592485 TCAGAAACTCGAGAAAAGCTCT 57.408 40.909 21.68 7.99 41.66 4.09
2269 2430 4.435386 GCATCAGAAACTCGAGAAAAGCTC 60.435 45.833 21.68 5.83 40.38 4.09
2270 2431 3.434984 GCATCAGAAACTCGAGAAAAGCT 59.565 43.478 21.68 5.86 0.00 3.74
2271 2432 3.425492 GGCATCAGAAACTCGAGAAAAGC 60.425 47.826 21.68 11.03 0.00 3.51
2272 2433 3.999663 AGGCATCAGAAACTCGAGAAAAG 59.000 43.478 21.68 4.91 0.00 2.27
2273 2434 4.008074 AGGCATCAGAAACTCGAGAAAA 57.992 40.909 21.68 0.00 0.00 2.29
2274 2435 3.685139 AGGCATCAGAAACTCGAGAAA 57.315 42.857 21.68 0.00 0.00 2.52
2275 2436 3.329386 CAAGGCATCAGAAACTCGAGAA 58.671 45.455 21.68 0.00 0.00 2.87
2276 2437 2.932622 GCAAGGCATCAGAAACTCGAGA 60.933 50.000 21.68 0.00 0.00 4.04
2277 2438 1.396301 GCAAGGCATCAGAAACTCGAG 59.604 52.381 11.84 11.84 0.00 4.04
2278 2439 1.002430 AGCAAGGCATCAGAAACTCGA 59.998 47.619 0.00 0.00 0.00 4.04
2279 2440 1.446907 AGCAAGGCATCAGAAACTCG 58.553 50.000 0.00 0.00 0.00 4.18
2280 2441 2.163211 GGAAGCAAGGCATCAGAAACTC 59.837 50.000 0.00 0.00 0.00 3.01
2281 2442 2.165998 GGAAGCAAGGCATCAGAAACT 58.834 47.619 0.00 0.00 0.00 2.66
2293 2454 4.082081 TGTTTCTGCATAATGGGAAGCAAG 60.082 41.667 0.00 0.00 36.44 4.01
2300 2461 6.875195 AGACAAAAATGTTTCTGCATAATGGG 59.125 34.615 0.00 0.00 0.00 4.00
2302 2463 7.385752 ACCAGACAAAAATGTTTCTGCATAATG 59.614 33.333 0.00 0.00 0.00 1.90
2303 2464 7.444299 ACCAGACAAAAATGTTTCTGCATAAT 58.556 30.769 0.00 0.00 0.00 1.28
2305 2466 6.265196 AGACCAGACAAAAATGTTTCTGCATA 59.735 34.615 0.00 0.00 0.00 3.14
2306 2467 5.069516 AGACCAGACAAAAATGTTTCTGCAT 59.930 36.000 0.00 0.00 0.00 3.96
2307 2468 4.402155 AGACCAGACAAAAATGTTTCTGCA 59.598 37.500 0.00 0.00 0.00 4.41
2308 2469 4.936891 AGACCAGACAAAAATGTTTCTGC 58.063 39.130 0.00 0.00 0.00 4.26
2309 2470 6.038603 TGAGAGACCAGACAAAAATGTTTCTG 59.961 38.462 0.00 0.00 0.00 3.02
2310 2471 6.038714 GTGAGAGACCAGACAAAAATGTTTCT 59.961 38.462 0.00 0.00 0.00 2.52
2312 2473 5.888161 AGTGAGAGACCAGACAAAAATGTTT 59.112 36.000 0.00 0.00 0.00 2.83
2313 2474 5.440610 AGTGAGAGACCAGACAAAAATGTT 58.559 37.500 0.00 0.00 0.00 2.71
2314 2475 5.041191 AGTGAGAGACCAGACAAAAATGT 57.959 39.130 0.00 0.00 0.00 2.71
2315 2476 6.402983 GCATAGTGAGAGACCAGACAAAAATG 60.403 42.308 0.00 0.00 0.00 2.32
2317 2478 4.997395 GCATAGTGAGAGACCAGACAAAAA 59.003 41.667 0.00 0.00 0.00 1.94
2318 2479 4.040339 TGCATAGTGAGAGACCAGACAAAA 59.960 41.667 0.00 0.00 0.00 2.44
2319 2480 3.578282 TGCATAGTGAGAGACCAGACAAA 59.422 43.478 0.00 0.00 0.00 2.83
2320 2481 3.165071 TGCATAGTGAGAGACCAGACAA 58.835 45.455 0.00 0.00 0.00 3.18
2321 2482 2.757314 CTGCATAGTGAGAGACCAGACA 59.243 50.000 0.00 0.00 0.00 3.41
2322 2483 3.020274 TCTGCATAGTGAGAGACCAGAC 58.980 50.000 0.00 0.00 0.00 3.51
2323 2484 3.372440 TCTGCATAGTGAGAGACCAGA 57.628 47.619 0.00 0.00 0.00 3.86
2324 2485 4.462508 TTTCTGCATAGTGAGAGACCAG 57.537 45.455 0.00 0.00 0.00 4.00
2325 2486 4.467438 TCATTTCTGCATAGTGAGAGACCA 59.533 41.667 0.00 0.00 0.00 4.02
2326 2487 5.016051 TCATTTCTGCATAGTGAGAGACC 57.984 43.478 0.00 0.00 0.00 3.85
2327 2488 6.018098 CCAATCATTTCTGCATAGTGAGAGAC 60.018 42.308 0.00 0.00 0.00 3.36
2328 2489 6.053650 CCAATCATTTCTGCATAGTGAGAGA 58.946 40.000 0.00 0.00 0.00 3.10
2329 2490 5.277876 GCCAATCATTTCTGCATAGTGAGAG 60.278 44.000 0.00 0.00 0.00 3.20
2330 2491 4.577693 GCCAATCATTTCTGCATAGTGAGA 59.422 41.667 0.00 0.00 0.00 3.27
2331 2492 4.337274 TGCCAATCATTTCTGCATAGTGAG 59.663 41.667 0.00 0.00 0.00 3.51
2332 2493 4.271661 TGCCAATCATTTCTGCATAGTGA 58.728 39.130 0.00 0.00 0.00 3.41
2333 2494 4.642445 TGCCAATCATTTCTGCATAGTG 57.358 40.909 0.00 0.00 0.00 2.74
2334 2495 7.148356 CGTATATGCCAATCATTTCTGCATAGT 60.148 37.037 10.30 4.30 45.08 2.12
2335 2496 7.148356 ACGTATATGCCAATCATTTCTGCATAG 60.148 37.037 10.30 2.84 45.08 2.23
2336 2497 6.654582 ACGTATATGCCAATCATTTCTGCATA 59.345 34.615 7.94 7.94 45.70 3.14
2337 2498 5.474532 ACGTATATGCCAATCATTTCTGCAT 59.525 36.000 0.00 0.00 44.28 3.96
2338 2499 4.821260 ACGTATATGCCAATCATTTCTGCA 59.179 37.500 0.00 0.00 36.63 4.41
2339 2500 5.149273 CACGTATATGCCAATCATTTCTGC 58.851 41.667 0.00 0.00 36.63 4.26
2340 2501 6.304356 ACACGTATATGCCAATCATTTCTG 57.696 37.500 0.00 0.00 36.63 3.02
2341 2502 6.426937 GGTACACGTATATGCCAATCATTTCT 59.573 38.462 0.00 0.00 36.63 2.52
2342 2503 6.203915 TGGTACACGTATATGCCAATCATTTC 59.796 38.462 0.00 0.00 36.63 2.17
2343 2504 6.058833 TGGTACACGTATATGCCAATCATTT 58.941 36.000 0.00 0.00 36.63 2.32
2344 2505 5.616270 TGGTACACGTATATGCCAATCATT 58.384 37.500 0.00 0.00 36.63 2.57
2345 2506 5.222079 TGGTACACGTATATGCCAATCAT 57.778 39.130 0.00 0.00 39.17 2.45
2346 2507 4.627058 CTGGTACACGTATATGCCAATCA 58.373 43.478 0.00 0.00 0.00 2.57
2347 2508 3.432252 GCTGGTACACGTATATGCCAATC 59.568 47.826 0.00 0.00 0.00 2.67
2348 2509 3.181459 TGCTGGTACACGTATATGCCAAT 60.181 43.478 0.00 0.00 0.00 3.16
2364 2525 5.343307 AAGACAAAAATGTTTCTGCTGGT 57.657 34.783 0.00 0.00 0.00 4.00
2412 2577 6.039047 TGTTTTACCGTTAACCTTGCACATAA 59.961 34.615 0.00 0.00 0.00 1.90
2414 2579 4.338682 TGTTTTACCGTTAACCTTGCACAT 59.661 37.500 0.00 0.00 0.00 3.21
2417 2582 4.197750 TCTGTTTTACCGTTAACCTTGCA 58.802 39.130 0.00 0.00 0.00 4.08
2418 2583 4.816786 TCTGTTTTACCGTTAACCTTGC 57.183 40.909 0.00 0.00 0.00 4.01
2419 2584 5.008316 AGCTTCTGTTTTACCGTTAACCTTG 59.992 40.000 0.00 0.00 0.00 3.61
2420 2585 5.008316 CAGCTTCTGTTTTACCGTTAACCTT 59.992 40.000 0.00 0.00 0.00 3.50
2421 2586 4.514066 CAGCTTCTGTTTTACCGTTAACCT 59.486 41.667 0.00 0.00 0.00 3.50
2422 2587 4.274214 ACAGCTTCTGTTTTACCGTTAACC 59.726 41.667 0.00 0.00 42.59 2.85
2423 2588 5.006941 TGACAGCTTCTGTTTTACCGTTAAC 59.993 40.000 0.66 0.00 45.44 2.01
2425 2590 4.695396 TGACAGCTTCTGTTTTACCGTTA 58.305 39.130 0.66 0.00 45.44 3.18
2427 2592 3.188159 TGACAGCTTCTGTTTTACCGT 57.812 42.857 0.66 0.00 45.44 4.83
2428 2593 3.120199 CCATGACAGCTTCTGTTTTACCG 60.120 47.826 0.00 0.00 45.44 4.02
2429 2594 3.821033 ACCATGACAGCTTCTGTTTTACC 59.179 43.478 0.00 0.00 45.44 2.85
2430 2595 4.515191 TGACCATGACAGCTTCTGTTTTAC 59.485 41.667 0.00 0.00 45.44 2.01
2431 2596 4.515191 GTGACCATGACAGCTTCTGTTTTA 59.485 41.667 0.00 0.00 45.44 1.52
2433 2598 2.880890 GTGACCATGACAGCTTCTGTTT 59.119 45.455 0.00 0.00 45.44 2.83
2436 2601 1.802960 GTGTGACCATGACAGCTTCTG 59.197 52.381 0.00 0.00 37.52 3.02
2437 2602 1.606480 CGTGTGACCATGACAGCTTCT 60.606 52.381 0.00 0.00 0.00 2.85
2438 2603 0.792640 CGTGTGACCATGACAGCTTC 59.207 55.000 0.00 0.00 0.00 3.86
2439 2604 0.392706 TCGTGTGACCATGACAGCTT 59.607 50.000 0.00 0.00 31.62 3.74
2440 2605 0.037882 CTCGTGTGACCATGACAGCT 60.038 55.000 0.00 0.00 33.12 4.24
2441 2606 1.630244 GCTCGTGTGACCATGACAGC 61.630 60.000 0.00 0.00 33.12 4.40
2442 2607 0.037882 AGCTCGTGTGACCATGACAG 60.038 55.000 0.00 0.00 33.12 3.51
2444 2609 1.195448 CAAAGCTCGTGTGACCATGAC 59.805 52.381 0.00 0.00 33.12 3.06
2445 2610 1.511850 CAAAGCTCGTGTGACCATGA 58.488 50.000 0.00 0.00 35.35 3.07
2446 2611 0.518636 CCAAAGCTCGTGTGACCATG 59.481 55.000 0.00 0.00 0.00 3.66
2447 2612 0.108585 ACCAAAGCTCGTGTGACCAT 59.891 50.000 0.00 0.00 0.00 3.55
2449 2614 0.531974 TCACCAAAGCTCGTGTGACC 60.532 55.000 7.77 0.00 33.09 4.02
2450 2615 1.512926 ATCACCAAAGCTCGTGTGAC 58.487 50.000 12.62 0.00 40.24 3.67
2451 2616 2.254546 AATCACCAAAGCTCGTGTGA 57.745 45.000 12.71 12.71 41.52 3.58
2454 2619 1.068333 CCCAAATCACCAAAGCTCGTG 60.068 52.381 0.00 0.00 0.00 4.35
2455 2620 1.247567 CCCAAATCACCAAAGCTCGT 58.752 50.000 0.00 0.00 0.00 4.18
2457 2622 0.968405 TGCCCAAATCACCAAAGCTC 59.032 50.000 0.00 0.00 0.00 4.09
2458 2623 1.648116 ATGCCCAAATCACCAAAGCT 58.352 45.000 0.00 0.00 0.00 3.74
2459 2624 2.477845 AATGCCCAAATCACCAAAGC 57.522 45.000 0.00 0.00 0.00 3.51
2460 2625 5.303971 TGTTAAATGCCCAAATCACCAAAG 58.696 37.500 0.00 0.00 0.00 2.77
2461 2626 5.296151 TGTTAAATGCCCAAATCACCAAA 57.704 34.783 0.00 0.00 0.00 3.28
2462 2627 4.963318 TGTTAAATGCCCAAATCACCAA 57.037 36.364 0.00 0.00 0.00 3.67
2463 2628 5.495926 AATGTTAAATGCCCAAATCACCA 57.504 34.783 0.00 0.00 0.00 4.17
2464 2629 7.913674 TTTAATGTTAAATGCCCAAATCACC 57.086 32.000 0.00 0.00 0.00 4.02
2493 2658 9.940166 CCTTTAAAAACAACGTATACAGTCTTT 57.060 29.630 3.32 0.97 0.00 2.52
2494 2659 9.112725 ACCTTTAAAAACAACGTATACAGTCTT 57.887 29.630 3.32 0.00 0.00 3.01
2495 2660 8.667076 ACCTTTAAAAACAACGTATACAGTCT 57.333 30.769 3.32 0.00 0.00 3.24
2496 2661 9.373750 GAACCTTTAAAAACAACGTATACAGTC 57.626 33.333 3.32 0.00 0.00 3.51
2497 2662 8.344831 GGAACCTTTAAAAACAACGTATACAGT 58.655 33.333 3.32 0.00 0.00 3.55
2498 2663 8.718047 GGAACCTTTAAAAACAACGTATACAG 57.282 34.615 3.32 0.00 0.00 2.74
2519 2684 3.193479 GGTGTTCATTTCTCCATGGGAAC 59.807 47.826 13.02 15.89 36.18 3.62
2520 2685 3.181424 TGGTGTTCATTTCTCCATGGGAA 60.181 43.478 13.02 11.54 0.00 3.97
2521 2686 2.378208 TGGTGTTCATTTCTCCATGGGA 59.622 45.455 13.02 5.29 0.00 4.37
2522 2687 2.806434 TGGTGTTCATTTCTCCATGGG 58.194 47.619 13.02 2.57 0.00 4.00
2523 2688 4.081406 TCTTGGTGTTCATTTCTCCATGG 58.919 43.478 4.97 4.97 0.00 3.66
2524 2689 5.710513 TTCTTGGTGTTCATTTCTCCATG 57.289 39.130 0.00 0.00 0.00 3.66
2525 2690 6.494491 TGAATTCTTGGTGTTCATTTCTCCAT 59.506 34.615 7.05 0.00 0.00 3.41
2526 2691 5.832595 TGAATTCTTGGTGTTCATTTCTCCA 59.167 36.000 7.05 0.00 0.00 3.86
2527 2692 6.331369 TGAATTCTTGGTGTTCATTTCTCC 57.669 37.500 7.05 0.00 0.00 3.71
2528 2693 7.699812 GCTATGAATTCTTGGTGTTCATTTCTC 59.300 37.037 7.05 0.00 41.41 2.87
2529 2694 7.395489 AGCTATGAATTCTTGGTGTTCATTTCT 59.605 33.333 7.05 1.74 41.41 2.52
2530 2695 7.542025 AGCTATGAATTCTTGGTGTTCATTTC 58.458 34.615 7.05 0.00 41.41 2.17
2531 2696 7.177216 TGAGCTATGAATTCTTGGTGTTCATTT 59.823 33.333 7.05 0.00 41.41 2.32
2532 2697 6.660521 TGAGCTATGAATTCTTGGTGTTCATT 59.339 34.615 7.05 0.00 41.41 2.57
2533 2698 6.182627 TGAGCTATGAATTCTTGGTGTTCAT 58.817 36.000 7.05 5.33 43.06 2.57
2534 2699 5.559770 TGAGCTATGAATTCTTGGTGTTCA 58.440 37.500 7.05 6.63 36.42 3.18
2535 2700 5.645497 ACTGAGCTATGAATTCTTGGTGTTC 59.355 40.000 7.05 4.45 0.00 3.18
2536 2701 5.564550 ACTGAGCTATGAATTCTTGGTGTT 58.435 37.500 7.05 0.00 0.00 3.32
2537 2702 5.171339 ACTGAGCTATGAATTCTTGGTGT 57.829 39.130 7.05 0.00 0.00 4.16
2538 2703 5.163683 CCAACTGAGCTATGAATTCTTGGTG 60.164 44.000 7.05 0.00 0.00 4.17
2539 2704 4.946157 CCAACTGAGCTATGAATTCTTGGT 59.054 41.667 7.05 2.45 0.00 3.67
2540 2705 4.946157 ACCAACTGAGCTATGAATTCTTGG 59.054 41.667 7.05 10.73 33.31 3.61
2541 2706 6.506500 AACCAACTGAGCTATGAATTCTTG 57.493 37.500 7.05 0.00 0.00 3.02
2542 2707 7.624549 TCTAACCAACTGAGCTATGAATTCTT 58.375 34.615 7.05 2.84 0.00 2.52
2543 2708 7.187824 TCTAACCAACTGAGCTATGAATTCT 57.812 36.000 7.05 0.00 0.00 2.40
2544 2709 6.018343 GCTCTAACCAACTGAGCTATGAATTC 60.018 42.308 0.00 0.00 46.69 2.17
2545 2710 5.819901 GCTCTAACCAACTGAGCTATGAATT 59.180 40.000 6.92 0.00 46.69 2.17
2546 2711 5.363939 GCTCTAACCAACTGAGCTATGAAT 58.636 41.667 6.92 0.00 46.69 2.57
2547 2712 4.759782 GCTCTAACCAACTGAGCTATGAA 58.240 43.478 6.92 0.00 46.69 2.57
2548 2713 4.392921 GCTCTAACCAACTGAGCTATGA 57.607 45.455 6.92 0.00 46.69 2.15
2554 2719 1.673033 CGGGTGCTCTAACCAACTGAG 60.673 57.143 0.00 0.00 42.47 3.35
2555 2720 0.320374 CGGGTGCTCTAACCAACTGA 59.680 55.000 0.00 0.00 42.47 3.41
2556 2721 0.320374 TCGGGTGCTCTAACCAACTG 59.680 55.000 0.00 0.00 42.47 3.16
2557 2722 0.608640 CTCGGGTGCTCTAACCAACT 59.391 55.000 0.00 0.00 42.47 3.16
2558 2723 0.320697 ACTCGGGTGCTCTAACCAAC 59.679 55.000 0.00 0.00 42.47 3.77
2559 2724 1.001633 GAACTCGGGTGCTCTAACCAA 59.998 52.381 0.00 0.00 42.47 3.67
2560 2725 0.606604 GAACTCGGGTGCTCTAACCA 59.393 55.000 0.00 0.00 42.47 3.67
2561 2726 0.606604 TGAACTCGGGTGCTCTAACC 59.393 55.000 0.00 0.00 39.71 2.85
2562 2727 2.067013 GTTGAACTCGGGTGCTCTAAC 58.933 52.381 0.00 0.00 0.00 2.34
2563 2728 1.968493 AGTTGAACTCGGGTGCTCTAA 59.032 47.619 0.00 0.00 0.00 2.10
2564 2729 1.544691 GAGTTGAACTCGGGTGCTCTA 59.455 52.381 9.85 0.00 35.28 2.43
2565 2730 0.318762 GAGTTGAACTCGGGTGCTCT 59.681 55.000 9.85 0.00 35.28 4.09
2566 2731 2.828933 GAGTTGAACTCGGGTGCTC 58.171 57.895 9.85 0.00 35.28 4.26
2574 2739 2.667137 CTCCGTGTGAGAGTTGAACTC 58.333 52.381 17.22 17.22 44.42 3.01
2575 2740 1.269831 GCTCCGTGTGAGAGTTGAACT 60.270 52.381 0.00 0.00 44.42 3.01
2576 2741 1.140816 GCTCCGTGTGAGAGTTGAAC 58.859 55.000 0.00 0.00 44.42 3.18
2577 2742 0.750249 TGCTCCGTGTGAGAGTTGAA 59.250 50.000 0.00 0.00 44.42 2.69
2578 2743 0.750249 TTGCTCCGTGTGAGAGTTGA 59.250 50.000 0.00 0.00 44.42 3.18
2579 2744 1.462283 CATTGCTCCGTGTGAGAGTTG 59.538 52.381 0.00 0.00 44.42 3.16
2580 2745 1.800805 CATTGCTCCGTGTGAGAGTT 58.199 50.000 0.00 0.00 44.42 3.01
2581 2746 0.671781 GCATTGCTCCGTGTGAGAGT 60.672 55.000 0.16 0.00 44.42 3.24
2582 2747 0.390866 AGCATTGCTCCGTGTGAGAG 60.391 55.000 5.03 0.00 44.42 3.20
2583 2748 0.894835 TAGCATTGCTCCGTGTGAGA 59.105 50.000 15.81 0.00 44.42 3.27
2584 2749 1.945387 ATAGCATTGCTCCGTGTGAG 58.055 50.000 15.81 0.00 44.47 3.51
2585 2750 2.093500 AGAATAGCATTGCTCCGTGTGA 60.093 45.455 15.81 0.00 40.44 3.58
2586 2751 2.283298 AGAATAGCATTGCTCCGTGTG 58.717 47.619 15.81 0.00 40.44 3.82
2587 2752 2.698855 AGAATAGCATTGCTCCGTGT 57.301 45.000 15.81 0.00 40.44 4.49
2588 2753 3.060272 CGTAAGAATAGCATTGCTCCGTG 60.060 47.826 15.81 0.00 39.18 4.94
2589 2754 3.123804 CGTAAGAATAGCATTGCTCCGT 58.876 45.455 15.81 6.83 39.18 4.69
2590 2755 3.123804 ACGTAAGAATAGCATTGCTCCG 58.876 45.455 15.81 9.36 39.84 4.63
2591 2756 5.047847 TGTACGTAAGAATAGCATTGCTCC 58.952 41.667 15.81 6.00 39.84 4.70
2592 2757 6.583912 TTGTACGTAAGAATAGCATTGCTC 57.416 37.500 15.81 0.90 39.84 4.26
2593 2758 6.978343 TTTGTACGTAAGAATAGCATTGCT 57.022 33.333 16.63 16.63 41.66 3.91
2594 2759 7.749126 ACTTTTTGTACGTAAGAATAGCATTGC 59.251 33.333 0.00 0.00 43.62 3.56
2595 2760 9.607285 AACTTTTTGTACGTAAGAATAGCATTG 57.393 29.630 0.00 0.00 43.62 2.82
2602 2767 9.706846 GTGTGTAAACTTTTTGTACGTAAGAAT 57.293 29.630 0.00 0.00 43.62 2.40
2603 2768 8.715998 TGTGTGTAAACTTTTTGTACGTAAGAA 58.284 29.630 0.00 0.00 43.62 2.52
2604 2769 8.249327 TGTGTGTAAACTTTTTGTACGTAAGA 57.751 30.769 0.00 0.00 43.62 2.10
2606 2771 8.502387 ACTTGTGTGTAAACTTTTTGTACGTAA 58.498 29.630 0.00 0.00 0.00 3.18
2607 2772 8.027440 ACTTGTGTGTAAACTTTTTGTACGTA 57.973 30.769 0.00 0.00 0.00 3.57
2608 2773 6.901265 ACTTGTGTGTAAACTTTTTGTACGT 58.099 32.000 0.00 0.00 0.00 3.57
2609 2774 7.534578 TGAACTTGTGTGTAAACTTTTTGTACG 59.465 33.333 0.00 0.00 0.00 3.67
2610 2775 8.730970 TGAACTTGTGTGTAAACTTTTTGTAC 57.269 30.769 0.00 0.00 0.00 2.90
2629 2795 4.342092 AGCTAACTGCCACAAAATGAACTT 59.658 37.500 0.00 0.00 44.23 2.66
2668 2834 6.870971 TTTGTACAAGTTACAGATGGGAAC 57.129 37.500 8.56 0.00 0.00 3.62
2669 2835 7.523052 GCATTTTGTACAAGTTACAGATGGGAA 60.523 37.037 8.56 0.00 0.00 3.97
2670 2836 6.072175 GCATTTTGTACAAGTTACAGATGGGA 60.072 38.462 8.56 0.00 0.00 4.37
2700 2866 5.702349 AAAGCTCCTCTTGTGAATTCAAG 57.298 39.130 10.35 5.21 44.08 3.02
2701 2867 5.221303 CCAAAAGCTCCTCTTGTGAATTCAA 60.221 40.000 10.35 0.00 41.60 2.69
2702 2868 4.279169 CCAAAAGCTCCTCTTGTGAATTCA 59.721 41.667 3.38 3.38 41.60 2.57
2703 2869 4.321527 CCCAAAAGCTCCTCTTGTGAATTC 60.322 45.833 0.00 0.00 41.60 2.17
2704 2870 3.575687 CCCAAAAGCTCCTCTTGTGAATT 59.424 43.478 0.00 0.00 41.60 2.17
2705 2871 3.160269 CCCAAAAGCTCCTCTTGTGAAT 58.840 45.455 0.00 0.00 41.60 2.57
2706 2872 2.586425 CCCAAAAGCTCCTCTTGTGAA 58.414 47.619 0.00 0.00 41.60 3.18
2780 2948 6.128117 GCTGACGAATTTTCCATGGTTACTTA 60.128 38.462 12.58 0.00 0.00 2.24
2783 2951 4.156008 AGCTGACGAATTTTCCATGGTTAC 59.844 41.667 12.58 0.00 0.00 2.50
2784 2952 4.155826 CAGCTGACGAATTTTCCATGGTTA 59.844 41.667 8.42 0.00 0.00 2.85
2785 2953 3.057315 CAGCTGACGAATTTTCCATGGTT 60.057 43.478 8.42 0.00 0.00 3.67
2794 2962 2.229792 TGAAAGCCAGCTGACGAATTT 58.770 42.857 17.39 8.18 0.00 1.82
2799 2967 0.654683 GCTATGAAAGCCAGCTGACG 59.345 55.000 17.39 0.00 46.25 4.35
2888 3056 8.445275 TGAACAAAGCTCTGTAGAATTACAAA 57.555 30.769 0.00 0.00 39.21 2.83
2889 3057 7.931407 TCTGAACAAAGCTCTGTAGAATTACAA 59.069 33.333 0.00 0.00 39.21 2.41
2890 3058 7.385205 GTCTGAACAAAGCTCTGTAGAATTACA 59.615 37.037 0.00 0.00 37.45 2.41
2891 3059 7.600752 AGTCTGAACAAAGCTCTGTAGAATTAC 59.399 37.037 0.00 0.00 0.00 1.89
2892 3060 7.600375 CAGTCTGAACAAAGCTCTGTAGAATTA 59.400 37.037 0.00 0.00 0.00 1.40
2893 3061 6.426328 CAGTCTGAACAAAGCTCTGTAGAATT 59.574 38.462 0.00 0.00 0.00 2.17
2894 3062 5.931146 CAGTCTGAACAAAGCTCTGTAGAAT 59.069 40.000 0.00 0.00 0.00 2.40
2896 3064 4.584743 TCAGTCTGAACAAAGCTCTGTAGA 59.415 41.667 0.00 0.00 0.00 2.59
2897 3065 4.876125 TCAGTCTGAACAAAGCTCTGTAG 58.124 43.478 0.00 0.00 0.00 2.74
2902 3070 6.045318 TGCTATATCAGTCTGAACAAAGCTC 58.955 40.000 20.97 5.26 0.00 4.09
2903 3071 5.982356 TGCTATATCAGTCTGAACAAAGCT 58.018 37.500 20.97 4.08 0.00 3.74
2909 3077 9.331282 AGGTTTTAATGCTATATCAGTCTGAAC 57.669 33.333 6.64 0.00 0.00 3.18
2910 3078 9.330063 CAGGTTTTAATGCTATATCAGTCTGAA 57.670 33.333 6.64 0.00 0.00 3.02
2938 3109 5.968848 CCGAACAATCAAAAAGAGAAAACGA 59.031 36.000 0.00 0.00 0.00 3.85
2940 3111 7.043391 CCTTCCGAACAATCAAAAAGAGAAAAC 60.043 37.037 0.00 0.00 0.00 2.43
2945 3116 4.229876 GCCTTCCGAACAATCAAAAAGAG 58.770 43.478 0.00 0.00 0.00 2.85
2947 3118 3.735746 GTGCCTTCCGAACAATCAAAAAG 59.264 43.478 0.00 0.00 0.00 2.27
2951 3122 1.974265 TGTGCCTTCCGAACAATCAA 58.026 45.000 0.00 0.00 0.00 2.57
2952 3123 1.879380 CTTGTGCCTTCCGAACAATCA 59.121 47.619 0.00 0.00 33.60 2.57
2954 3125 0.598065 GCTTGTGCCTTCCGAACAAT 59.402 50.000 0.00 0.00 33.60 2.71
2971 3142 0.041090 ATCCACCGATTTTTGGGGCT 59.959 50.000 0.00 0.00 33.25 5.19
2974 3145 2.423538 GACTGATCCACCGATTTTTGGG 59.576 50.000 0.00 0.00 33.25 4.12
2981 3152 1.126488 ATGCAGACTGATCCACCGAT 58.874 50.000 6.65 0.00 0.00 4.18
2982 3153 0.176449 CATGCAGACTGATCCACCGA 59.824 55.000 6.65 0.00 0.00 4.69
2983 3154 1.434622 GCATGCAGACTGATCCACCG 61.435 60.000 14.21 0.00 0.00 4.94
2985 3156 1.015109 CTGCATGCAGACTGATCCAC 58.985 55.000 38.90 0.00 46.30 4.02
2986 3157 0.746923 GCTGCATGCAGACTGATCCA 60.747 55.000 44.02 9.37 46.30 3.41
2988 3159 2.235845 TAGCTGCATGCAGACTGATC 57.764 50.000 44.02 27.51 46.30 2.92
2989 3160 2.704464 TTAGCTGCATGCAGACTGAT 57.296 45.000 44.02 26.63 46.30 2.90
2990 3161 2.477845 TTTAGCTGCATGCAGACTGA 57.522 45.000 44.02 32.21 46.30 3.41
2991 3162 3.377485 AGAATTTAGCTGCATGCAGACTG 59.623 43.478 44.02 24.01 46.30 3.51
2992 3163 3.377485 CAGAATTTAGCTGCATGCAGACT 59.623 43.478 44.02 37.30 46.30 3.24
2993 3164 3.376234 TCAGAATTTAGCTGCATGCAGAC 59.624 43.478 44.02 33.78 46.30 3.51
2994 3165 3.613030 TCAGAATTTAGCTGCATGCAGA 58.387 40.909 44.02 27.37 46.30 4.26
2995 3166 4.365899 TTCAGAATTTAGCTGCATGCAG 57.634 40.909 37.81 37.81 45.94 4.41
2996 3167 4.994907 ATTCAGAATTTAGCTGCATGCA 57.005 36.364 21.29 21.29 45.94 3.96
2997 3168 4.506654 CCAATTCAGAATTTAGCTGCATGC 59.493 41.667 11.82 11.82 43.29 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.